ENCODE cell lines, expression (Ernst 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Name	miRBASE accession
hsa-miR-490-3p Links miRBase	MIMAT0002806

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Promoter	Score	Transcript	Gene	Gene Info
chr11_-_115375107	0.09	ENST00000545380.1 ENST00000452722.3 ENST00000537058.1 ENST00000536727.1 ENST00000542447.2 ENST00000331581.6	CADM1	cell adhesion molecule 1
chr7_-_139876812	0.08	ENST00000397560.2	JHDM1D	lysine (K)-specific demethylase 7A
chr18_+_55102917	0.06	ENST00000491143.2	ONECUT2	one cut homeobox 2
chr1_-_247094628	0.06	ENST00000366508.1 ENST00000326225.3 ENST00000391829.2	AHCTF1	AT hook containing transcription factor 1
chrX_+_123095155	0.05	ENST00000371160.1 ENST00000435103.1	STAG2	stromal antigen 2
chr19_+_34919257	0.05	ENST00000246548.4 ENST00000590048.2	UBA2	ubiquitin-like modifier activating enzyme 2
chr16_+_1203194	0.04	ENST00000348261.5 ENST00000358590.4	CACNA1H	calcium channel, voltage-dependent, T type, alpha 1H subunit
chr13_-_41240717	0.03	ENST00000379561.5	FOXO1	forkhead box O1
chr11_+_63706444	0.03	ENST00000377793.4 ENST00000456907.2 ENST00000539656.1	NAA40	N(alpha)-acetyltransferase 40, NatD catalytic subunit
chr17_-_48785216	0.03	ENST00000285243.6	ANKRD40	ankyrin repeat domain 40
chr19_+_4007644	0.03	ENST00000262971.2	PIAS4	protein inhibitor of activated STAT, 4
chr18_+_42260861	0.03	ENST00000282030.5	SETBP1	SET binding protein 1
chr3_-_189838670	0.03	ENST00000319332.5	LEPREL1	leprecan-like 1
chr9_-_38069208	0.02	ENST00000377707.3 ENST00000377700.4	SHB	Src homology 2 domain containing adaptor protein B
chr11_-_129062093	0.02	ENST00000310343.9	ARHGAP32	Rho GTPase activating protein 32
chr8_-_103876965	0.02	ENST00000337198.5	AZIN1	antizyme inhibitor 1
chr11_+_76571911	0.02	ENST00000534206.1 ENST00000532485.1 ENST00000526597.1 ENST00000533873.1 ENST00000538157.1	ACER3	alkaline ceramidase 3
chr12_-_123011536	0.02	ENST00000331738.7 ENST00000354654.2	RSRC2	arginine/serine-rich coiled-coil 2
chr4_+_184020398	0.01	ENST00000403733.3 ENST00000378925.3	WWC2	WW and C2 domain containing 2
chr12_+_67663056	0.01	ENST00000545606.1	CAND1	cullin-associated and neddylation-dissociated 1
chr9_-_123964114	0.01	ENST00000373840.4	RAB14	RAB14, member RAS oncogene family
chr4_-_113437328	0.01	ENST00000313341.3	NEUROG2	neurogenin 2
chr15_-_27018175	0.01	ENST00000311550.5	GABRB3	gamma-aminobutyric acid (GABA) A receptor, beta 3
chr14_+_57735614	0.01	ENST00000261558.3	AP5M1	adaptor-related protein complex 5, mu 1 subunit
chr11_+_125462690	0.01	ENST00000392708.4 ENST00000529196.1 ENST00000531491.1	STT3A	STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
chr8_-_17104356	0.01	ENST00000361272.4 ENST00000523917.1	CNOT7	CCR4-NOT transcription complex, subunit 7
chr1_+_93811438	0.00	ENST00000370272.4 ENST00000370267.1	DR1	down-regulator of transcription 1, TBP-binding (negative cofactor 2)
chr2_+_210444142	0.00	ENST00000360351.4 ENST00000361559.4	MAP2	microtubule-associated protein 2
chr15_+_52121822	0.00	ENST00000558455.1 ENST00000308580.7	TMOD3	tropomodulin 3 (ubiquitous)

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0042271	susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0031510	SUMO activating enzyme complex(GO:0031510)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0008332	low voltage-gated calcium channel activity(GO:0008332)