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ENCODE cell lines, expression (Ernst 2011)

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Results for AACGGAA

Z-value: 0.14

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miRNA associated with seed AACGGAA

NamemiRBASE accession
MIMAT0000440

Activity profile of AACGGAA motif

Sorted Z-values of AACGGAA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of AACGGAA

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr17_-_46623441 0.28 ENST00000330070.4
HOXB2
homeobox B2
chrX_-_109561294 0.16 ENST00000372059.2
ENST00000262844.5
AMMECR1
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr10_-_81205373 0.11 ENST00000372336.3
ZCCHC24
zinc finger, CCHC domain containing 24
chr19_+_3359561 0.06 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
NFIC
nuclear factor I/C (CCAAT-binding transcription factor)
chr19_-_15560730 0.05 ENST00000389282.4
ENST00000263381.7
WIZ
widely interspaced zinc finger motifs
chr7_-_108096822 0.05 ENST00000379028.3
ENST00000413765.2
ENST00000379022.4
NRCAM
neuronal cell adhesion molecule
chr5_+_149887672 0.05 ENST00000261797.6
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr6_+_116601265 0.04 ENST00000452085.3
DSE
dermatan sulfate epimerase
chr7_-_92463210 0.04 ENST00000265734.4
CDK6
cyclin-dependent kinase 6
chr9_-_16870704 0.03 ENST00000380672.4
ENST00000380667.2
ENST00000380666.2
ENST00000486514.1
BNC2
basonuclin 2
chr9_+_133454943 0.02 ENST00000319725.9
FUBP3
far upstream element (FUSE) binding protein 3
chr12_+_122242597 0.02 ENST00000267197.5
SETD1B
SET domain containing 1B
chr3_-_18466787 0.02 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr3_-_52090461 0.01 ENST00000296483.6
ENST00000495880.1
DUSP7
dual specificity phosphatase 7
chr7_-_17980091 0.01 ENST00000409389.1
ENST00000409604.1
ENST00000428135.3
SNX13
sorting nexin 13
chr16_-_4897266 0.01 ENST00000591451.1
ENST00000436648.5
ENST00000381983.3
ENST00000588297.1
ENST00000321919.9
GLYR1
glyoxylate reductase 1 homolog (Arabidopsis)
chr12_-_58240470 0.00 ENST00000548823.1
ENST00000398073.2
CTDSP2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr8_-_134115118 0.00 ENST00000395352.3
ENST00000338087.5
SLA
Src-like-adaptor
chr9_-_3525968 0.00 ENST00000382004.3
ENST00000302303.1
ENST00000449190.1
RFX3
regulatory factor X, 3 (influences HLA class II expression)
chr15_+_52043758 0.00 ENST00000249700.4
ENST00000539962.2
TMOD2
tropomodulin 2 (neuronal)

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0021569 rhombomere 3 development(GO:0021569)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070984 SET domain binding(GO:0070984)
0.0 0.0 GO:0047757 chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.0 0.0 GO:0050119 N-acetylglucosamine deacetylase activity(GO:0050119)
0.0 0.0 GO:0098770 FBXO family protein binding(GO:0098770)