Project

ENCODE cell lines, expression (Ernst 2011)

Navigation
Downloads

Results for ACUGGCC

Z-value: 0.34

Motif logo

logo of

miRNA associated with seed ACUGGCC

NamemiRBASE accession
hsa-miR-193a-3p
MIMAT0000459
hsa-miR-193b-3p
MIMAT0002819

Activity profile of ACUGGCC motif

Sorted Z-values of ACUGGCC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ACUGGCC

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:

Promoter Score Transcript Gene Gene Info
chr1_+_183605200 0.53 ENST00000304685.4
 RGL1
 ral guanine nucleotide dissociation stimulator-like 1
chr1_+_182992545 0.38 ENST00000258341.4
 LAMC1
 laminin, gamma 1 (formerly LAMB2)
chr3_-_124774802 0.38 ENST00000311127.4
 HEG1
 heart development protein with EGF-like domains 1
chr6_-_29527702 0.36 ENST00000377050.4
 UBD
 ubiquitin D
chr11_-_115375107 0.36 ENST00000545380.1
ENST00000452722.3
ENST00000537058.1
ENST00000536727.1
ENST00000542447.2
ENST00000331581.6
 CADM1
 cell adhesion molecule 1
chr15_-_61521495 0.34 ENST00000335670.6
 RORA
 RAR-related orphan receptor A
chr12_+_94542459 0.33 ENST00000258526.4
 PLXNC1
 plexin C1
chr7_-_26904317 0.29 ENST00000345317.2
 SKAP2
 src kinase associated phosphoprotein 2
chr13_+_98794810 0.29 ENST00000595437.1
 FARP1
 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
chr11_+_128563652 0.29 ENST00000527786.2
 FLI1
 Fli-1 proto-oncogene, ETS transcription factor
chr10_+_97515409 0.24 ENST00000371207.3
ENST00000543964.1
 ENTPD1
 ectonucleoside triphosphate diphosphohydrolase 1
chr22_-_39548627 0.23 ENST00000216133.5
 CBX7
 chromobox homolog 7
chr20_-_14318248 0.23 ENST00000378053.3
ENST00000341420.4
 FLRT3
 fibronectin leucine rich transmembrane protein 3
chr6_-_16761678 0.22 ENST00000244769.4
ENST00000436367.1
 ATXN1
 ataxin 1
chr3_-_123603137 0.21 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
 MYLK
 myosin light chain kinase
chr4_-_23891693 0.18 ENST00000264867.2
 PPARGC1A
 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
chr1_-_92351769 0.18 ENST00000212355.4
 TGFBR3
 transforming growth factor, beta receptor III
chr3_-_57199397 0.17 ENST00000296318.7
 IL17RD
 interleukin 17 receptor D
chr2_-_208030647 0.17 ENST00000309446.6
 KLF7
 Kruppel-like factor 7 (ubiquitous)
chr16_-_4166186 0.16 ENST00000294016.3
 ADCY9
 adenylate cyclase 9
chr6_+_86159821 0.14 ENST00000369651.3
 NT5E
 5'-nucleotidase, ecto (CD73)
chr10_+_70480963 0.14 ENST00000265872.6
ENST00000535016.1
ENST00000538031.1
ENST00000543719.1
ENST00000539539.1
ENST00000543225.1
ENST00000536012.1
ENST00000494903.2
 CCAR1
 cell division cycle and apoptosis regulator 1
chr10_+_89622870 0.14 ENST00000371953.3
 PTEN
 phosphatase and tensin homolog
chr6_-_75994536 0.14 ENST00000475111.2
ENST00000230461.6
 TMEM30A
 transmembrane protein 30A
chr8_-_57123815 0.14 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
 PLAG1
 pleiomorphic adenoma gene 1
chr17_-_38020392 0.13 ENST00000346872.3
ENST00000439167.2
ENST00000377945.3
ENST00000394189.2
ENST00000377944.3
ENST00000377958.2
ENST00000535189.1
ENST00000377952.2
 IKZF3
 IKAROS family zinc finger 3 (Aiolos)
chr20_-_4982132 0.13 ENST00000338244.1
ENST00000424750.2
 SLC23A2
 solute carrier family 23 (ascorbic acid transporter), member 2
chr14_+_57046500 0.12 ENST00000261556.6
 TMEM260
 transmembrane protein 260
chr17_-_66287257 0.12 ENST00000327268.4
 SLC16A6
 solute carrier family 16, member 6
chr18_+_55711575 0.11 ENST00000356462.6
ENST00000400345.3
ENST00000589054.1
ENST00000256832.7
 NEDD4L
 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
chr1_+_183155373 0.11 ENST00000493293.1
ENST00000264144.4
 LAMC2
 laminin, gamma 2
chr3_+_132136331 0.10 ENST00000260818.6
 DNAJC13
 DnaJ (Hsp40) homolog, subfamily C, member 13
chr2_+_204192942 0.10 ENST00000295851.5
ENST00000261017.5
 ABI2
 abl-interactor 2
chr6_-_47277634 0.10 ENST00000296861.2
 TNFRSF21
 tumor necrosis factor receptor superfamily, member 21
chr12_+_11802753 0.10 ENST00000396373.4
 ETV6
 ets variant 6
chr11_-_27494279 0.09 ENST00000379214.4
 LGR4
 leucine-rich repeat containing G protein-coupled receptor 4
chr12_-_57030115 0.09 ENST00000379441.3
ENST00000179765.5
ENST00000551812.1
 BAZ2A
 bromodomain adjacent to zinc finger domain, 2A
chr8_-_93115445 0.08 ENST00000523629.1
 RUNX1T1
 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr5_+_38846101 0.08 ENST00000274276.3
 OSMR
 oncostatin M receptor
chr12_-_31744031 0.08 ENST00000389082.5
 DENND5B
 DENN/MADD domain containing 5B
chr5_+_133861790 0.07 ENST00000395003.1
 PHF15
 jade family PHD finger 2
chr22_+_24666763 0.07 ENST00000437398.1
ENST00000421374.1
ENST00000314328.9
ENST00000541492.1
 SPECC1L
 sperm antigen with calponin homology and coiled-coil domains 1-like
chr2_-_161350305 0.07 ENST00000348849.3
 RBMS1
 RNA binding motif, single stranded interacting protein 1
chr13_+_111365602 0.07 ENST00000333219.7
 ING1
 inhibitor of growth family, member 1
chr11_-_46940074 0.06 ENST00000378623.1
ENST00000534404.1
 LRP4
 low density lipoprotein receptor-related protein 4
chr1_+_77333117 0.06 ENST00000477717.1
 ST6GALNAC5
 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
chr20_+_57226284 0.06 ENST00000458280.1
ENST00000355957.5
ENST00000361770.5
ENST00000312283.8
ENST00000412911.1
ENST00000359617.4
ENST00000371141.4
 STX16
 syntaxin 16
chrX_+_110339439 0.05 ENST00000372010.1
ENST00000519681.1
ENST00000372007.5
 PAK3
 p21 protein (Cdc42/Rac)-activated kinase 3
chr4_-_105416039 0.05 ENST00000394767.2
 CXXC4
 CXXC finger protein 4
chr1_+_151584544 0.05 ENST00000458013.2
ENST00000368843.3
 SNX27
 sorting nexin family member 27
chr1_-_169863016 0.05 ENST00000367772.4
ENST00000367771.6
 SCYL3
 SCY1-like 3 (S. cerevisiae)
chr12_-_111021110 0.04 ENST00000354300.3
 PPTC7
 PTC7 protein phosphatase homolog (S. cerevisiae)
chr18_+_46065393 0.04 ENST00000256413.3
 CTIF
 CBP80/20-dependent translation initiation factor
chr1_+_203764742 0.04 ENST00000432282.1
ENST00000453771.1
ENST00000367214.1
ENST00000367212.3
ENST00000332127.4
 ZC3H11A
 zinc finger CCCH-type containing 11A
chr14_+_23775971 0.04 ENST00000250405.5
 BCL2L2
 BCL2-like 2
chr11_+_69455855 0.04 ENST00000227507.2
ENST00000536559.1
 CCND1
 cyclin D1
chr17_+_61699766 0.03 ENST00000579585.1
ENST00000584573.1
ENST00000361733.3
ENST00000361357.3
 MAP3K3
 mitogen-activated protein kinase kinase kinase 3
chr19_+_797392 0.03 ENST00000350092.4
ENST00000349038.4
ENST00000586481.1
ENST00000585535.1
 PTBP1
 polypyrimidine tract binding protein 1
chr15_+_64443905 0.03 ENST00000325881.4
 SNX22
 sorting nexin 22
chr1_-_67519782 0.03 ENST00000235345.5
 SLC35D1
 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
chr14_-_68283291 0.03 ENST00000555452.1
ENST00000347230.4
 ZFYVE26
 zinc finger, FYVE domain containing 26
chr11_-_77532050 0.03 ENST00000308488.6
 RSF1
 remodeling and spacing factor 1
chr22_+_40390930 0.03 ENST00000333407.6
 FAM83F
 family with sequence similarity 83, member F
chr5_+_172483347 0.03 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
 CREBRF
 CREB3 regulatory factor
chrX_-_47479246 0.03 ENST00000295987.7
ENST00000340666.4
 SYN1
 synapsin I
chr10_-_99052382 0.03 ENST00000453547.2
ENST00000316676.8
ENST00000358308.3
ENST00000466484.1
ENST00000358531.4
 ARHGAP19-SLIT1
ARHGAP19
 ARHGAP19-SLIT1 readthrough (NMD candidate)
Rho GTPase activating protein 19
chr3_-_52090461 0.02 ENST00000296483.6
ENST00000495880.1
 DUSP7
 dual specificity phosphatase 7
chr2_+_113931513 0.02 ENST00000245796.6
ENST00000441564.3
 PSD4
 pleckstrin and Sec7 domain containing 4
chr2_+_29204161 0.02 ENST00000379558.4
ENST00000403861.2
 FAM179A
 family with sequence similarity 179, member A
chr9_-_135819987 0.02 ENST00000298552.3
ENST00000403810.1
 TSC1
 tuberous sclerosis 1
chr20_+_42086525 0.02 ENST00000244020.3
 SRSF6
 serine/arginine-rich splicing factor 6
chrX_-_40594755 0.02 ENST00000324817.1
 MED14
 mediator complex subunit 14
chr10_-_38146510 0.02 ENST00000395867.3
 ZNF248
 zinc finger protein 248
chr11_-_124670550 0.01 ENST00000239614.4
 MSANTD2
 Myb/SANT-like DNA-binding domain containing 2
chr2_-_69870835 0.01 ENST00000409085.4
ENST00000406297.3
 AAK1
 AP2 associated kinase 1
chr11_+_118307179 0.01 ENST00000534358.1
ENST00000531904.2
ENST00000389506.5
ENST00000354520.4
 KMT2A
 lysine (K)-specific methyltransferase 2A
chr9_+_115983808 0.01 ENST00000374210.6
ENST00000374212.4
 SLC31A1
 solute carrier family 31 (copper transporter), member 1
chr3_+_71803201 0.01 ENST00000304411.2
 GPR27
 G protein-coupled receptor 27
chr2_-_131850951 0.01 ENST00000409185.1
ENST00000389915.3
 FAM168B
 family with sequence similarity 168, member B
chr1_-_150552006 0.01 ENST00000307940.3
ENST00000369026.2
 MCL1
 myeloid cell leukemia sequence 1 (BCL2-related)
chr4_-_87281224 0.01 ENST00000395169.3
ENST00000395161.2
 MAPK10
 mitogen-activated protein kinase 10
chr3_-_128902729 0.01 ENST00000451728.2
ENST00000446936.2
ENST00000502976.1
ENST00000500450.2
ENST00000441626.2
 CNBP
 CCHC-type zinc finger, nucleic acid binding protein
chr17_+_61627814 0.01 ENST00000310827.4
ENST00000431926.1
ENST00000415273.2
 DCAF7
 DDB1 and CUL4 associated factor 7
chr7_-_143059845 0.01 ENST00000443739.2
 FAM131B
 family with sequence similarity 131, member B
chr2_+_48541776 0.01 ENST00000413569.1
ENST00000340553.3
 FOXN2
 forkhead box N2
chr11_+_33563821 0.00 ENST00000321505.4
ENST00000265654.5
ENST00000389726.3
 KIAA1549L
 KIAA1549-like
chr12_-_42538657 0.00 ENST00000398675.3
 GXYLT1
 glucoside xylosyltransferase 1
chr17_+_48796905 0.00 ENST00000505658.1
ENST00000393227.2
ENST00000240304.1
ENST00000311571.3
ENST00000505619.1
ENST00000544170.1
ENST00000510984.1
 LUC7L3
 LUC7-like 3 (S. cerevisiae)
chr14_-_27066636 0.00 ENST00000267422.7
ENST00000344429.5
ENST00000574031.1
ENST00000465357.2
ENST00000547619.1
 NOVA1
 neuro-oncological ventral antigen 1
chr3_-_52312636 0.00 ENST00000296490.3
 WDR82
 WD repeat domain 82
chr16_+_56225248 0.00 ENST00000262493.6
 GNAO1
 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
chr22_-_32146106 0.00 ENST00000327423.6
ENST00000397493.2
ENST00000434485.1
ENST00000412743.1
 PRR14L
 proline rich 14-like
chr17_+_8213590 0.00 ENST00000361926.3
 ARHGEF15
 Rho guanine nucleotide exchange factor (GEF) 15
chr19_-_14629224 0.00 ENST00000254322.2
 DNAJB1
 DnaJ (Hsp40) homolog, subfamily B, member 1

Gene Ontology Analysis

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.1 GO:0005607 laminin-2 complex(GO:0005607)
0.1 0.4 GO:0005606 laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259) laminin-11 complex(GO:0043260)
0.0 0.2 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.0 0.2 GO:0042272 nuclear RNA export factor complex(GO:0042272)
0.0 0.2 GO:0071203 WASH complex(GO:0071203)
0.0 0.1 GO:0033553 rDNA heterochromatin(GO:0033553)
0.0 0.2 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.1 GO:0035749 myelin sheath adaxonal region(GO:0035749)
0.0 0.2 GO:0044295 axonal growth cone(GO:0044295)

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0042271 susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)
0.1 0.4 GO:0070842 aggresome assembly(GO:0070842)
0.1 0.2 GO:0014878 response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878) regulation of progesterone biosynthetic process(GO:2000182)
0.1 0.2 GO:0007181 transforming growth factor beta receptor complex assembly(GO:0007181)
0.1 0.4 GO:0090270 fibroblast growth factor production(GO:0090269) regulation of fibroblast growth factor production(GO:0090270)
0.0 0.1 GO:0046086 adenosine biosynthetic process(GO:0046086)
0.0 0.1 GO:1903984 positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.0 0.1 GO:0097252 oligodendrocyte apoptotic process(GO:0097252)
0.0 0.5 GO:0070831 basement membrane assembly(GO:0070831)
0.0 0.2 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.1 GO:1902954 regulation of early endosome to recycling endosome transport(GO:1902954)
0.0 0.1 GO:0007296 vitellogenesis(GO:0007296)
0.0 0.1 GO:0061290 cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204)
0.0 0.1 GO:2001288 positive regulation of caveolin-mediated endocytosis(GO:2001288)
0.0 0.3 GO:0021694 cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0 0.2 GO:0003344 pericardium morphogenesis(GO:0003344)
0.0 0.1 GO:1904395 positive regulation of skeletal muscle acetylcholine-gated channel clustering(GO:1904395)
0.0 0.1 GO:0038165 oncostatin-M-mediated signaling pathway(GO:0038165)
0.0 0.2 GO:0034656 nucleobase-containing small molecule catabolic process(GO:0034656)
0.0 0.1 GO:0035461 vitamin transmembrane transport(GO:0035461)
0.0 0.1 GO:0070863 positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.0 0.3 GO:0035855 megakaryocyte development(GO:0035855)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA
0.0 0.1 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.0 0.3 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.0 0.2 REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY Genes involved in Adenylate cyclase activating pathway
0.0 0.1 REACTOME PURINE CATABOLISM Genes involved in Purine catabolism
0.0 0.4 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0008321 Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.0 0.3 GO:0008142 oxysterol binding(GO:0008142)
0.0 0.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.0 0.2 GO:0034046 poly(G) binding(GO:0034046)
0.0 0.2 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.1 GO:0008523 sodium-dependent multivitamin transmembrane transporter activity(GO:0008523)
0.0 0.2 GO:0030368 interleukin-17 receptor activity(GO:0030368)
0.0 0.1 GO:0004924 oncostatin-M receptor activity(GO:0004924)
0.0 0.3 GO:0017154 semaphorin receptor activity(GO:0017154)
0.0 0.1 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 0.2 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.2 GO:0045499 chemorepellent activity(GO:0045499)
0.0 0.1 GO:0019871 sodium channel inhibitor activity(GO:0019871)
0.0 0.2 GO:0042975 peroxisome proliferator activated receptor binding(GO:0042975)
0.0 0.3 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions