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ENCODE cell lines, expression (Ernst 2011)

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Results for AGCACCA

Z-value: 1.76

Motif logo

miRNA associated with seed AGCACCA

NamemiRBASE accession
MIMAT0000086
MIMAT0000100
MIMAT0000681

Activity profile of AGCACCA motif

Sorted Z-values of AGCACCA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCACCA

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr7_+_94023873 5.85 ENST00000297268.6
COL1A2
collagen, type I, alpha 2
chr2_+_189839046 5.73 ENST00000304636.3
ENST00000317840.5
COL3A1
collagen, type III, alpha 1
chr15_+_81071684 5.33 ENST00000220244.3
ENST00000394685.3
ENST00000356249.5
KIAA1199
KIAA1199
chr3_-_120170052 4.81 ENST00000295633.3
FSTL1
follistatin-like 1
chr7_+_130126012 4.42 ENST00000341441.5
MEST
mesoderm specific transcript
chr9_+_137533615 4.37 ENST00000371817.3
COL5A1
collagen, type V, alpha 1
chr15_-_48937982 4.35 ENST00000316623.5
FBN1
fibrillin 1
chr21_-_28338732 4.20 ENST00000284987.5
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
chr2_-_238323007 3.88 ENST00000295550.4
COL6A3
collagen, type VI, alpha 3
chr1_-_103574024 3.87 ENST00000512756.1
ENST00000370096.3
ENST00000358392.2
ENST00000353414.4
COL11A1
collagen, type XI, alpha 1
chr2_-_190044480 3.85 ENST00000374866.3
COL5A2
collagen, type V, alpha 2
chr2_-_1748214 3.57 ENST00000433670.1
ENST00000425171.1
ENST00000252804.4
PXDN
peroxidasin homolog (Drosophila)
chr16_+_55512742 3.53 ENST00000568715.1
ENST00000219070.4
MMP2
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
chr5_-_121413974 3.48 ENST00000231004.4
LOX
lysyl oxidase
chrY_+_15016725 3.38 ENST00000336079.3
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr17_-_48278983 3.37 ENST00000225964.5
COL1A1
collagen, type I, alpha 1
chr4_-_157892498 3.29 ENST00000502773.1
PDGFC
platelet derived growth factor C
chr2_-_190927447 3.24 ENST00000260950.4
MSTN
myostatin
chr5_-_111093406 3.05 ENST00000379671.3
NREP
neuronal regeneration related protein
chr13_+_110959598 2.94 ENST00000360467.5
COL4A2
collagen, type IV, alpha 2
chr3_+_159557637 2.75 ENST00000445224.2
SCHIP1
schwannomin interacting protein 1
chr8_-_122653630 2.74 ENST00000303924.4
HAS2
hyaluronan synthase 2
chr1_+_182992545 2.63 ENST00000258341.4
LAMC1
laminin, gamma 1 (formerly LAMB2)
chr3_+_158991025 2.61 ENST00000337808.6
IQCJ-SCHIP1
IQCJ-SCHIP1 readthrough
chr1_+_53068020 2.54 ENST00000361314.4
GPX7
glutathione peroxidase 7
chr5_-_122372354 2.53 ENST00000306442.4
PPIC
peptidylprolyl isomerase C (cyclophilin C)
chr21_-_39288743 2.52 ENST00000609713.1
KCNJ6
potassium inwardly-rectifying channel, subfamily J, member 6
chr8_-_23261589 2.47 ENST00000524168.1
ENST00000523833.2
ENST00000519243.1
ENST00000389131.3
LOXL2
lysyl oxidase-like 2
chr15_-_23932437 2.39 ENST00000331837.4
NDN
necdin, melanoma antigen (MAGE) family member
chr2_-_227664474 2.30 ENST00000305123.5
IRS1
insulin receptor substrate 1
chr1_-_225840747 2.18 ENST00000366843.2
ENST00000366844.3
ENAH
enabled homolog (Drosophila)
chr10_-_735553 2.17 ENST00000280886.6
ENST00000423550.1
DIP2C
DIP2 disco-interacting protein 2 homolog C (Drosophila)
chr3_-_114790179 2.13 ENST00000462705.1
ZBTB20
zinc finger and BTB domain containing 20
chr11_+_75273101 2.05 ENST00000533603.1
ENST00000358171.3
ENST00000526242.1
SERPINH1
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
chr16_-_10674528 2.00 ENST00000359543.3
EMP2
epithelial membrane protein 2
chr13_-_110959478 1.94 ENST00000543140.1
ENST00000375820.4
COL4A1
collagen, type IV, alpha 1
chr4_+_124320665 1.94 ENST00000394339.2
SPRY1
sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr11_-_117186946 1.92 ENST00000313005.6
ENST00000528053.1
BACE1
beta-site APP-cleaving enzyme 1
chr1_-_68299130 1.82 ENST00000370982.3
GNG12
guanine nucleotide binding protein (G protein), gamma 12
chr22_-_36236265 1.67 ENST00000414461.2
ENST00000416721.2
ENST00000449924.2
ENST00000262829.7
ENST00000397305.3
RBFOX2
RNA binding protein, fox-1 homolog (C. elegans) 2
chr6_-_52441713 1.67 ENST00000182527.3
TRAM2
translocation associated membrane protein 2
chr9_-_21335356 1.64 ENST00000359039.4
KLHL9
kelch-like family member 9
chr5_-_149535421 1.61 ENST00000261799.4
PDGFRB
platelet-derived growth factor receptor, beta polypeptide
chr1_-_236228403 1.58 ENST00000366595.3
NID1
nidogen 1
chr2_-_162931052 1.58 ENST00000360534.3
DPP4
dipeptidyl-peptidase 4
chr6_+_39760783 1.58 ENST00000398904.2
ENST00000538976.1
DAAM2
dishevelled associated activator of morphogenesis 2
chr17_-_56032684 1.58 ENST00000577830.1
CUEDC1
CUE domain containing 1
chr19_+_48216600 1.55 ENST00000263277.3
ENST00000538399.1
EHD2
EH-domain containing 2
chr3_+_99357319 1.54 ENST00000452013.1
ENST00000261037.3
ENST00000273342.4
COL8A1
collagen, type VIII, alpha 1
chr1_-_120612240 1.48 ENST00000256646.2
NOTCH2
notch 2
chr19_-_10121144 1.48 ENST00000264828.3
COL5A3
collagen, type V, alpha 3
chr16_-_70719925 1.41 ENST00000338779.6
MTSS1L
metastasis suppressor 1-like
chr1_+_236849754 1.38 ENST00000542672.1
ENST00000366578.4
ACTN2
actinin, alpha 2
chr8_+_26435359 1.36 ENST00000311151.5
DPYSL2
dihydropyrimidinase-like 2
chrX_+_9754461 1.35 ENST00000380913.3
SHROOM2
shroom family member 2
chr1_-_17304771 1.34 ENST00000375534.3
MFAP2
microfibrillar-associated protein 2
chr17_-_15165854 1.31 ENST00000395936.1
ENST00000395938.2
PMP22
peripheral myelin protein 22
chr10_+_43633914 1.27 ENST00000374466.3
ENST00000374464.1
CSGALNACT2
chondroitin sulfate N-acetylgalactosaminyltransferase 2
chr3_-_79068594 1.26 ENST00000436010.2
ROBO1
roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr11_-_86666427 1.25 ENST00000531380.1
FZD4
frizzled family receptor 4
chr7_+_116139424 1.25 ENST00000222693.4
CAV2
caveolin 2
chr1_+_213123915 1.21 ENST00000366968.4
ENST00000490792.1
VASH2
vasohibin 2
chr12_-_6451235 1.21 ENST00000440083.2
ENST00000162749.2
TNFRSF1A
tumor necrosis factor receptor superfamily, member 1A
chr10_+_102790980 1.19 ENST00000393459.1
ENST00000224807.5
SFXN3
sideroflexin 3
chr7_+_17338239 1.17 ENST00000242057.4
AHR
aryl hydrocarbon receptor
chrX_-_51239425 1.16 ENST00000375992.3
NUDT11
nudix (nucleoside diphosphate linked moiety X)-type motif 11
chr5_-_157002775 1.15 ENST00000257527.4
ADAM19
ADAM metallopeptidase domain 19
chr7_+_106809406 1.15 ENST00000468410.1
ENST00000478930.1
ENST00000464009.1
ENST00000222574.4
HBP1
HMG-box transcription factor 1
chr12_+_13349650 1.12 ENST00000256951.5
ENST00000431267.2
ENST00000542474.1
ENST00000544053.1
EMP1
epithelial membrane protein 1
chr9_-_130639997 1.12 ENST00000373176.1
AK1
adenylate kinase 1
chr16_+_69221028 1.11 ENST00000336278.4
SNTB2
syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
chr1_+_151030234 1.08 ENST00000368921.3
MLLT11
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
chr7_-_124405681 1.07 ENST00000303921.2
GPR37
G protein-coupled receptor 37 (endothelin receptor type B-like)
chr17_+_26662730 1.05 ENST00000226225.2
TNFAIP1
tumor necrosis factor, alpha-induced protein 1 (endothelial)
chr14_-_53417732 1.05 ENST00000399304.3
ENST00000395631.2
ENST00000341590.3
ENST00000343279.4
FERMT2
fermitin family member 2
chr6_-_134639180 1.05 ENST00000367858.5
SGK1
serum/glucocorticoid regulated kinase 1
chr9_+_101705893 1.01 ENST00000375001.3
COL15A1
collagen, type XV, alpha 1
chr6_+_143929307 1.00 ENST00000427704.2
ENST00000305766.6
PHACTR2
phosphatase and actin regulator 2
chr10_-_33246722 1.00 ENST00000437302.1
ENST00000396033.2
ITGB1
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
chr10_-_30024716 1.00 ENST00000375398.2
ENST00000375400.3
SVIL
supervillin
chr12_-_51477333 0.99 ENST00000228515.1
ENST00000548206.1
ENST00000546935.1
ENST00000548981.1
CSRNP2
cysteine-serine-rich nuclear protein 2
chr2_-_202316260 0.99 ENST00000332624.3
TRAK2
trafficking protein, kinesin binding 2
chr8_+_11141925 0.98 ENST00000221086.3
MTMR9
myotubularin related protein 9
chr10_+_80828774 0.97 ENST00000334512.5
ZMIZ1
zinc finger, MIZ-type containing 1
chr8_+_38614807 0.95 ENST00000330691.6
ENST00000348567.4
TACC1
transforming, acidic coiled-coil containing protein 1
chr2_+_109204909 0.93 ENST00000393310.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr8_-_119124045 0.91 ENST00000378204.2
EXT1
exostosin glycosyltransferase 1
chr9_+_131314859 0.91 ENST00000358161.5
ENST00000372731.4
ENST00000372739.3
SPTAN1
spectrin, alpha, non-erythrocytic 1
chr5_+_149887672 0.89 ENST00000261797.6
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr10_-_128077024 0.88 ENST00000368679.4
ENST00000368676.4
ENST00000448723.1
ADAM12
ADAM metallopeptidase domain 12
chr12_-_65146636 0.87 ENST00000418919.2
GNS
glucosamine (N-acetyl)-6-sulfatase
chr17_-_40575535 0.86 ENST00000357037.5
PTRF
polymerase I and transcript release factor
chr2_+_9346892 0.86 ENST00000281419.3
ENST00000315273.4
ASAP2
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr6_-_128841503 0.84 ENST00000368215.3
ENST00000532331.1
ENST00000368213.5
ENST00000368207.3
ENST00000525459.1
ENST00000368210.3
ENST00000368226.4
ENST00000368227.3
PTPRK
protein tyrosine phosphatase, receptor type, K
chr2_-_96931679 0.83 ENST00000258439.3
ENST00000432959.1
TMEM127
transmembrane protein 127
chr9_+_35161998 0.83 ENST00000396787.1
ENST00000378495.3
ENST00000378496.4
UNC13B
unc-13 homolog B (C. elegans)
chr6_-_111804393 0.80 ENST00000368802.3
ENST00000368805.1
REV3L
REV3-like, polymerase (DNA directed), zeta, catalytic subunit
chr19_+_709101 0.80 ENST00000338448.5
PALM
paralemmin
chr11_+_842808 0.79 ENST00000397397.2
ENST00000397411.2
ENST00000397396.1
TSPAN4
tetraspanin 4
chr1_+_87170247 0.79 ENST00000370558.4
SH3GLB1
SH3-domain GRB2-like endophilin B1
chr1_-_244013384 0.79 ENST00000366539.1
AKT3
v-akt murine thymoma viral oncogene homolog 3
chr5_-_137368708 0.79 ENST00000033079.3
FAM13B
family with sequence similarity 13, member B
chr12_+_3186521 0.78 ENST00000537971.1
ENST00000011898.5
TSPAN9
tetraspanin 9
chr1_+_218519577 0.77 ENST00000366930.4
ENST00000366929.4
TGFB2
transforming growth factor, beta 2
chrX_+_73641286 0.77 ENST00000587091.1
SLC16A2
solute carrier family 16, member 2 (thyroid hormone transporter)
chr14_+_23067146 0.76 ENST00000428304.2
ABHD4
abhydrolase domain containing 4
chr10_-_62704005 0.76 ENST00000337910.5
RHOBTB1
Rho-related BTB domain containing 1
chr5_-_146833485 0.75 ENST00000398514.3
DPYSL3
dihydropyrimidinase-like 3
chr6_-_110500905 0.75 ENST00000392587.2
WASF1
WAS protein family, member 1
chr14_-_77923897 0.74 ENST00000343765.2
ENST00000327028.4
ENST00000556412.1
ENST00000557466.1
ENST00000448935.2
ENST00000553888.1
ENST00000557658.1
VIPAS39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
chrX_+_49687216 0.74 ENST00000376088.3
CLCN5
chloride channel, voltage-sensitive 5
chr12_-_81331697 0.74 ENST00000552864.1
LIN7A
lin-7 homolog A (C. elegans)
chr7_+_73442102 0.74 ENST00000445912.1
ENST00000252034.7
ELN
elastin
chr17_-_62658186 0.73 ENST00000262435.9
SMURF2
SMAD specific E3 ubiquitin protein ligase 2
chr12_+_54332535 0.73 ENST00000243056.3
HOXC13
homeobox C13
chr8_+_1772132 0.70 ENST00000349830.3
ENST00000520359.1
ENST00000518288.1
ENST00000398560.1
ARHGEF10
Rho guanine nucleotide exchange factor (GEF) 10
chr14_-_55878538 0.70 ENST00000247178.5
ATG14
autophagy related 14
chr7_+_94285637 0.70 ENST00000482108.1
ENST00000488574.1
PEG10
paternally expressed 10
chr14_+_55034599 0.69 ENST00000392067.3
ENST00000357634.3
SAMD4A
sterile alpha motif domain containing 4A
chr1_+_203444887 0.69 ENST00000343110.2
PRELP
proline/arginine-rich end leucine-rich repeat protein
chr1_-_146644122 0.69 ENST00000254101.3
PRKAB2
protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr11_-_66336060 0.68 ENST00000310325.5
CTSF
cathepsin F
chr7_+_43152191 0.67 ENST00000395891.2
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr15_+_63334831 0.67 ENST00000288398.6
ENST00000358278.3
ENST00000560445.1
ENST00000403994.3
ENST00000357980.4
ENST00000559556.1
ENST00000559397.1
ENST00000267996.7
ENST00000560970.1
TPM1
tropomyosin 1 (alpha)
chr4_-_54930790 0.67 ENST00000263921.3
CHIC2
cysteine-rich hydrophobic domain 2
chr12_+_9067327 0.66 ENST00000433083.2
ENST00000544916.1
ENST00000544539.1
ENST00000539063.1
PHC1
polyhomeotic homolog 1 (Drosophila)
chr13_-_67804445 0.66 ENST00000456367.1
ENST00000377861.3
ENST00000544246.1
PCDH9
protocadherin 9
chrX_-_64196307 0.65 ENST00000545618.1
ZC4H2
zinc finger, C4H2 domain containing
chr5_-_176981417 0.64 ENST00000514747.1
ENST00000443375.2
ENST00000329540.5
FAM193B
family with sequence similarity 193, member B
chr12_-_69326940 0.63 ENST00000549781.1
ENST00000548262.1
ENST00000551568.1
ENST00000548954.1
CPM
carboxypeptidase M
chr14_-_80677970 0.60 ENST00000438257.4
DIO2
deiodinase, iodothyronine, type II
chr10_+_75757863 0.59 ENST00000372755.3
ENST00000211998.4
ENST00000417648.2
VCL
vinculin
chr2_+_148602058 0.58 ENST00000241416.7
ENST00000535787.1
ENST00000404590.1
ACVR2A
activin A receptor, type IIA
chr9_-_14314066 0.58 ENST00000397575.3
NFIB
nuclear factor I/B
chr4_-_85887503 0.58 ENST00000509172.1
ENST00000322366.6
ENST00000295888.4
ENST00000502713.1
WDFY3
WD repeat and FYVE domain containing 3
chr5_-_78281603 0.57 ENST00000264914.4
ARSB
arylsulfatase B
chr10_+_115438920 0.57 ENST00000429617.1
ENST00000369331.4
CASP7
caspase 7, apoptosis-related cysteine peptidase
chr9_+_112810878 0.57 ENST00000434623.2
ENST00000374525.1
AKAP2
A kinase (PRKA) anchor protein 2
chr11_+_117049445 0.56 ENST00000324225.4
ENST00000532960.1
SIDT2
SID1 transmembrane family, member 2
chr5_-_178772424 0.56 ENST00000251582.7
ENST00000274609.5
ADAMTS2
ADAM metallopeptidase with thrombospondin type 1 motif, 2
chr5_-_133304473 0.55 ENST00000231512.3
C5orf15
chromosome 5 open reading frame 15
chr5_+_153418466 0.55 ENST00000522782.1
ENST00000439768.2
ENST00000436816.1
ENST00000322602.5
ENST00000522177.1
ENST00000520899.1
MFAP3
microfibrillar-associated protein 3
chr19_+_34745442 0.55 ENST00000299505.6
ENST00000588470.1
ENST00000589583.1
ENST00000588338.2
KIAA0355
KIAA0355
chr14_-_90085458 0.54 ENST00000345097.4
ENST00000555855.1
ENST00000555353.1
FOXN3
forkhead box N3
chr11_-_78052923 0.54 ENST00000340149.2
GAB2
GRB2-associated binding protein 2
chr15_+_90808919 0.52 ENST00000379095.3
NGRN
neugrin, neurite outgrowth associated
chr11_+_57520715 0.52 ENST00000524630.1
ENST00000529919.1
ENST00000399039.4
ENST00000533189.1
CTNND1
catenin (cadherin-associated protein), delta 1
chr3_+_126707437 0.51 ENST00000393409.2
ENST00000251772.4
PLXNA1
plexin A1
chr10_+_11206925 0.51 ENST00000354440.2
ENST00000315874.4
ENST00000427450.1
CELF2
CUGBP, Elav-like family member 2
chr13_-_103451307 0.50 ENST00000376004.4
KDELC1
KDEL (Lys-Asp-Glu-Leu) containing 1
chr14_-_51562745 0.49 ENST00000298355.3
TRIM9
tripartite motif containing 9
chr20_+_3451650 0.49 ENST00000262919.5
ATRN
attractin
chr1_+_2160134 0.49 ENST00000378536.4
SKI
v-ski avian sarcoma viral oncogene homolog
chr1_-_155881156 0.48 ENST00000539040.1
ENST00000368323.3
RIT1
Ras-like without CAAX 1
chr16_+_3507985 0.48 ENST00000421765.3
ENST00000360862.5
ENST00000414063.2
ENST00000610180.1
ENST00000608993.1
NAA60
NAA60
N(alpha)-acetyltransferase 60, NatF catalytic subunit
N-alpha-acetyltransferase 60
chr2_-_240322643 0.48 ENST00000345617.3
HDAC4
histone deacetylase 4
chr3_+_137906109 0.47 ENST00000481646.1
ENST00000469044.1
ENST00000491704.1
ENST00000461600.1
ARMC8
armadillo repeat containing 8
chr7_+_128379346 0.47 ENST00000535011.2
ENST00000542996.2
ENST00000535623.1
ENST00000538546.1
ENST00000249364.4
ENST00000449187.2
CALU
calumenin
chr15_-_76005170 0.47 ENST00000308508.5
CSPG4
chondroitin sulfate proteoglycan 4
chr9_+_112542572 0.47 ENST00000374530.3
PALM2-AKAP2
PALM2-AKAP2 readthrough
chr2_+_173292301 0.46 ENST00000264106.6
ENST00000375221.2
ENST00000343713.4
ITGA6
integrin, alpha 6
chr20_+_30193083 0.46 ENST00000376112.3
ENST00000376105.3
ID1
inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
chr20_+_30865429 0.45 ENST00000375712.3
KIF3B
kinesin family member 3B
chr11_-_101454658 0.45 ENST00000344327.3
TRPC6
transient receptor potential cation channel, subfamily C, member 6
chr9_-_37465396 0.44 ENST00000307750.4
ZBTB5
zinc finger and BTB domain containing 5
chrX_+_95939711 0.43 ENST00000373049.4
ENST00000324765.8
DIAPH2
diaphanous-related formin 2
chr16_-_71758602 0.43 ENST00000568954.1
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2
chr16_+_66914264 0.42 ENST00000311765.2
ENST00000568869.1
ENST00000561704.1
ENST00000568398.1
ENST00000566776.1
PDP2
pyruvate dehyrogenase phosphatase catalytic subunit 2
chr1_+_203595903 0.42 ENST00000367218.3
ENST00000367219.3
ENST00000391954.2
ATP2B4
ATPase, Ca++ transporting, plasma membrane 4
chr17_-_3599327 0.42 ENST00000551178.1
ENST00000552276.1
ENST00000547178.1
P2RX5
purinergic receptor P2X, ligand-gated ion channel, 5
chr20_+_34700333 0.40 ENST00000441639.1
EPB41L1
erythrocyte membrane protein band 4.1-like 1
chr8_-_93115445 0.40 ENST00000523629.1
RUNX1T1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr10_-_32345305 0.40 ENST00000302418.4
KIF5B
kinesin family member 5B
chr9_+_129567282 0.39 ENST00000449886.1
ENST00000373464.4
ENST00000450858.1
ZBTB43
zinc finger and BTB domain containing 43
chr5_+_177019159 0.39 ENST00000332598.6
TMED9
transmembrane emp24 protein transport domain containing 9
chr16_+_69599861 0.38 ENST00000354436.2
NFAT5
nuclear factor of activated T-cells 5, tonicity-responsive
chr5_+_140560980 0.38 ENST00000361016.2
PCDHB16
protocadherin beta 16
chr6_-_80657292 0.38 ENST00000369816.4
ELOVL4
ELOVL fatty acid elongase 4
chr12_+_56915713 0.38 ENST00000262031.5
ENST00000552247.2
RBMS2
RNA binding motif, single stranded interacting protein 2
chr7_-_129592700 0.38 ENST00000472396.1
ENST00000355621.3
UBE2H
ubiquitin-conjugating enzyme E2H
chrX_-_106959631 0.38 ENST00000486554.1
ENST00000372390.4
TSC22D3
TSC22 domain family, member 3
chr5_+_157170703 0.37 ENST00000286307.5
LSM11
LSM11, U7 small nuclear RNA associated
chr11_-_60929074 0.37 ENST00000301765.5
VPS37C
vacuolar protein sorting 37 homolog C (S. cerevisiae)
chr10_-_111683183 0.37 ENST00000403138.2
ENST00000369683.1
XPNPEP1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
chr20_-_45035223 0.36 ENST00000450812.1
ENST00000290246.6
ENST00000439931.2
ENST00000396391.1
ELMO2
engulfment and cell motility 2
chr17_-_7297833 0.36 ENST00000571802.1
ENST00000576201.1
ENST00000573213.1
ENST00000324822.11
TMEM256-PLSCR3
TMEM256-PLSCR3 readthrough (NMD candidate)
chr5_+_65222299 0.35 ENST00000284037.5
ERBB2IP
erbb2 interacting protein
chr14_+_23775971 0.35 ENST00000250405.5
BCL2L2
BCL2-like 2
chr20_-_39928705 0.32 ENST00000436099.2
ENST00000309060.3
ENST00000373261.1
ENST00000436440.2
ENST00000540170.1
ENST00000557816.1
ENST00000560361.1
ZHX3
zinc fingers and homeoboxes 3
chr6_-_3227877 0.32 ENST00000259818.7
TUBB2B
tubulin, beta 2B class IIb
chr6_-_3157760 0.32 ENST00000333628.3
TUBB2A
tubulin, beta 2A class IIa
chr9_+_136325089 0.31 ENST00000291722.7
ENST00000316948.4
ENST00000540581.1
CACFD1
calcium channel flower domain containing 1
chr19_+_19431490 0.31 ENST00000392313.6
ENST00000262815.8
ENST00000609122.1
MAU2
MAU2 sister chromatid cohesion factor
chr8_-_120651020 0.31 ENST00000522826.1
ENST00000520066.1
ENST00000259486.6
ENST00000075322.6
ENPP2
ectonucleotide pyrophosphatase/phosphodiesterase 2
chr17_+_45727204 0.30 ENST00000290158.4
KPNB1
karyopherin (importin) beta 1
chr12_+_6493199 0.29 ENST00000228918.4
LTBR
lymphotoxin beta receptor (TNFR superfamily, member 3)
chr10_+_104535994 0.29 ENST00000369889.4
WBP1L
WW domain binding protein 1-like
chr5_-_139726181 0.28 ENST00000507104.1
ENST00000230990.6
HBEGF
heparin-binding EGF-like growth factor
chr7_-_121036337 0.28 ENST00000426156.1
ENST00000359943.3
ENST00000412653.1
FAM3C
family with sequence similarity 3, member C
chr12_+_122516626 0.27 ENST00000319080.7
MLXIP
MLX interacting protein

Gene Ontology Analysis

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 23.2 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.9 2.7 GO:0050501 hyaluronan synthase activity(GO:0050501)
0.7 3.6 GO:0005152 interleukin-1 receptor antagonist activity(GO:0005152)
0.6 1.9 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.6 4.3 GO:0030023 extracellular matrix constituent conferring elasticity(GO:0030023)
0.5 1.4 GO:0004157 dihydropyrimidinase activity(GO:0004157)
0.4 6.0 GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.3 1.4 GO:0010861 thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375)
0.3 1.6 GO:0043237 laminin-1 binding(GO:0043237)
0.3 0.8 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.3 1.8 GO:0042328 heparan sulfate N-acetylglucosaminyltransferase activity(GO:0042328)
0.3 1.3 GO:0047237 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047237)
0.2 1.5 GO:0038049 transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049)
0.2 1.2 GO:0043120 tumor necrosis factor binding(GO:0043120)
0.2 1.2 GO:0000298 endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432) inositol diphosphate tetrakisphosphate diphosphatase activity(GO:0052840) inositol bisdiphosphate tetrakisphosphate diphosphatase activity(GO:0052841) inositol diphosphate pentakisphosphate diphosphatase activity(GO:0052842) inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity(GO:0052843) inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity(GO:0052844) inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity(GO:0052845) inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity(GO:0052846) inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity(GO:0052847) inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity(GO:0052848)
0.2 0.9 GO:0008449 N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.2 0.9 GO:0004874 aryl hydrocarbon receptor activity(GO:0004874)
0.2 1.3 GO:0008046 axon guidance receptor activity(GO:0008046)
0.2 1.0 GO:0098639 collagen binding involved in cell-matrix adhesion(GO:0098639)
0.2 2.5 GO:0016018 cyclosporin A binding(GO:0016018)
0.2 0.5 GO:0035033 histone deacetylase regulator activity(GO:0035033)
0.2 14.2 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.2 2.5 GO:0005161 platelet-derived growth factor receptor binding(GO:0005161)
0.1 2.6 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.1 1.7 GO:0042301 phosphate ion binding(GO:0042301)
0.1 0.4 GO:0036487 nitric-oxide synthase inhibitor activity(GO:0036487)
0.1 0.4 GO:0071209 U7 snRNA binding(GO:0071209)
0.1 0.5 GO:0001025 RNA polymerase III transcription factor binding(GO:0001025)
0.1 0.6 GO:0004800 thyroxine 5'-deiodinase activity(GO:0004800)
0.1 0.4 GO:0099609 microtubule lateral binding(GO:0099609)
0.1 1.4 GO:0015280 ligand-gated sodium channel activity(GO:0015280)
0.1 0.6 GO:0098821 BMP receptor activity(GO:0098821)
0.1 0.8 GO:0015349 thyroid hormone transmembrane transporter activity(GO:0015349)
0.1 0.8 GO:0035374 chondroitin sulfate binding(GO:0035374)
0.1 1.1 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 4.7 GO:0050840 extracellular matrix binding(GO:0050840)
0.1 1.7 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068)
0.1 2.5 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 2.5 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.3 GO:0047391 alkylglycerophosphoethanolamine phosphodiesterase activity(GO:0047391)
0.1 1.6 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.4 GO:0004741 [pyruvate dehydrogenase (lipoamide)] phosphatase activity(GO:0004741)
0.1 0.7 GO:0097016 L27 domain binding(GO:0097016)
0.1 0.4 GO:0102337 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 1.1 GO:0045295 gamma-catenin binding(GO:0045295)
0.1 0.6 GO:0045294 alpha-catenin binding(GO:0045294)
0.1 1.1 GO:0017049 GTP-Rho binding(GO:0017049)
0.1 0.6 GO:0003831 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity(GO:0003831)
0.1 3.3 GO:0005160 transforming growth factor beta receptor binding(GO:0005160)
0.1 5.4 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0005169 neurotrophin TRKB receptor binding(GO:0005169)
0.0 0.7 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.6 GO:0004065 arylsulfatase activity(GO:0004065)
0.0 0.1 GO:0004088 carbamoyl-phosphate synthase (ammonia) activity(GO:0004087) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity(GO:0004088)
0.0 4.8 GO:0017048 Rho GTPase binding(GO:0017048)
0.0 0.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0030350 iron-responsive element binding(GO:0030350)
0.0 0.2 GO:0004692 cGMP-dependent protein kinase activity(GO:0004692)
0.0 0.8 GO:0019992 diacylglycerol binding(GO:0019992)
0.0 1.7 GO:0050699 WW domain binding(GO:0050699)
0.0 0.4 GO:0043426 MRF binding(GO:0043426)
0.0 1.0 GO:0017081 chloride channel regulator activity(GO:0017081)
0.0 0.5 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0070326 very-low-density lipoprotein particle receptor binding(GO:0070326)
0.0 0.4 GO:0035381 extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381)
0.0 0.4 GO:0070679 inositol 1,4,5 trisphosphate binding(GO:0070679)
0.0 0.1 GO:0042799 histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.0 3.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.7 GO:0005247 voltage-gated chloride channel activity(GO:0005247)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.1 GO:0015439 heme-transporting ATPase activity(GO:0015439)
0.0 0.2 GO:0050815 phosphoserine binding(GO:0050815)
0.0 1.8 GO:0019894 kinesin binding(GO:0019894)
0.0 0.2 GO:0051864 histone demethylase activity (H3-K36 specific)(GO:0051864)
0.0 0.1 GO:0005477 pyruvate secondary active transmembrane transporter activity(GO:0005477)
0.0 0.1 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.0 4.1 GO:0008201 heparin binding(GO:0008201)
0.0 0.5 GO:0046527 glucosyltransferase activity(GO:0046527)
0.0 0.6 GO:0042813 Wnt-activated receptor activity(GO:0042813)
0.0 0.1 GO:0031871 proteinase activated receptor binding(GO:0031871)
0.0 0.2 GO:0070883 pre-miRNA binding(GO:0070883)
0.0 0.2 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.1 GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.0 0.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.9 GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547)
0.0 0.2 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.0 0.2 GO:0004723 calcium-dependent protein serine/threonine phosphatase activity(GO:0004723)
0.0 0.1 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0 0.6 GO:0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200)
0.0 0.0 GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.0 0.2 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0 0.8 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.7 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 1.1 GO:0008186 ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
0.0 1.0 GO:0017137 Rab GTPase binding(GO:0017137)
0.0 0.5 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.1 GO:0097322 7SK snRNA binding(GO:0097322)
0.0 0.5 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.1 GO:0017154 semaphorin receptor activity(GO:0017154)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 36.4 NABA COLLAGENS Genes encoding collagen proteins
0.1 4.3 PID INTEGRIN5 PATHWAY Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.1 3.1 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions
0.1 5.6 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 5.8 PID SYNDECAN 2 PATHWAY Syndecan-2-mediated signaling events
0.1 1.6 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.1 1.5 PID S1P S1P2 PATHWAY S1P2 pathway
0.1 1.7 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 2.0 SA MMP CYTOKINE CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.1 14.1 NABA ECM REGULATORS Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.1 0.4 PID PI3K PLC TRK PATHWAY Trk receptor signaling mediated by PI3K and PLC-gamma
0.0 2.9 PID AURORA B PATHWAY Aurora B signaling
0.0 2.1 PID A6B1 A6B4 INTEGRIN PATHWAY a6b1 and a6b4 Integrin signaling
0.0 6.2 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.5 PID RANBP2 PATHWAY Sumoylation by RanBP2 regulates transcriptional repression
0.0 1.0 PID ALK1 PATHWAY ALK1 signaling events
0.0 1.4 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.9 PID INSULIN PATHWAY Insulin Pathway
0.0 1.2 PID BMP PATHWAY BMP receptor signaling
0.0 0.5 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.0 0.3 PID SMAD2 3PATHWAY Regulation of cytoplasmic and nuclear SMAD2/3 signaling
0.0 0.2 PID ECADHERIN KERATINOCYTE PATHWAY E-cadherin signaling in keratinocytes
0.0 0.6 PID WNT SIGNALING PATHWAY Wnt signaling network
0.0 0.9 PID ARF6 TRAFFICKING PATHWAY Arf6 trafficking events
0.0 0.5 PID IL3 PATHWAY IL3-mediated signaling events
0.0 0.8 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.0 0.6 PID THROMBIN PAR1 PATHWAY PAR1-mediated thrombin signaling events
0.0 1.3 PID ILK PATHWAY Integrin-linked kinase signaling
0.0 0.7 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.9 PID P38 ALPHA BETA DOWNSTREAM PATHWAY Signaling mediated by p38-alpha and p38-beta
0.0 0.6 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.0 1.2 PID P75 NTR PATHWAY p75(NTR)-mediated signaling
0.0 0.3 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 0.6 PID FAK PATHWAY Signaling events mediated by focal adhesion kinase
0.0 4.3 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.0 0.7 NABA PROTEOGLYCANS Genes encoding proteoglycans
0.0 0.3 PID HDAC CLASSIII PATHWAY Signaling events mediated by HDAC Class III
0.0 0.7 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.7 PID RHOA REG PATHWAY Regulation of RhoA activity

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
3.2 9.7 GO:0005588 collagen type V trimer(GO:0005588)
2.1 19.0 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.7 2.6 GO:0005606 laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259) laminin-11 complex(GO:0043260)
0.5 2.3 GO:0005899 insulin receptor complex(GO:0005899)
0.5 4.6 GO:0098651 basement membrane collagen trimer(GO:0098651)
0.3 1.0 GO:0034680 integrin alpha1-beta1 complex(GO:0034665) integrin alpha3-beta1 complex(GO:0034667) integrin alpha8-beta1 complex(GO:0034678) integrin alpha10-beta1 complex(GO:0034680)
0.3 1.2 GO:0034751 aryl hydrocarbon receptor complex(GO:0034751)
0.3 3.9 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.3 0.8 GO:0044305 calyx of Held(GO:0044305)
0.3 5.7 GO:0001527 microfibril(GO:0001527) fibril(GO:0043205)
0.2 0.7 GO:1903349 omegasome membrane(GO:1903349)
0.2 1.6 GO:0046581 intercellular canaliculus(GO:0046581)
0.2 0.5 GO:0034676 integrin alpha6-beta4 complex(GO:0034676)
0.1 0.4 GO:0005873 plus-end kinesin complex(GO:0005873)
0.1 0.6 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.1 1.0 GO:0036449 microtubule minus-end(GO:0036449)
0.1 3.5 GO:0005581 collagen trimer(GO:0005581)
0.1 0.6 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 0.7 GO:0071953 elastic fiber(GO:0071953)
0.1 0.2 GO:0048269 methionine adenosyltransferase complex(GO:0048269)
0.1 0.9 GO:0008091 spectrin(GO:0008091)
0.1 0.7 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.1 1.6 GO:0005605 basal lamina(GO:0005605)
0.1 0.5 GO:0005915 zonula adherens(GO:0005915)
0.1 19.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.4 GO:0036056 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.1 0.7 GO:0031209 SCAR complex(GO:0031209)
0.1 0.4 GO:0000813 ESCRT I complex(GO:0000813)
0.1 2.5 GO:0005604 basement membrane(GO:0005604)
0.0 0.6 GO:0005916 fascia adherens(GO:0005916)
0.0 0.4 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.0 0.1 GO:0044354 pinosome(GO:0044352) macropinosome(GO:0044354)
0.0 0.6 GO:0044300 cerebellar mossy fiber(GO:0044300)
0.0 0.2 GO:0016342 catenin complex(GO:0016342)
0.0 0.7 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.5 GO:0002116 semaphorin receptor complex(GO:0002116)
0.0 1.2 GO:0002080 acrosomal membrane(GO:0002080)
0.0 0.4 GO:0005683 U7 snRNP(GO:0005683)
0.0 1.1 GO:0031143 pseudopodium(GO:0031143)
0.0 1.5 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 1.1 GO:0090665 dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.0 0.7 GO:0032059 bleb(GO:0032059)
0.0 0.8 GO:0031527 filopodium membrane(GO:0031527) dendritic spine membrane(GO:0032591)
0.0 2.5 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0 1.0 GO:0031092 platelet alpha granule membrane(GO:0031092)
0.0 3.5 GO:0005901 caveola(GO:0005901)
0.0 7.1 GO:0005578 proteinaceous extracellular matrix(GO:0005578)
0.0 0.7 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.3 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.2 GO:0070545 PeBoW complex(GO:0070545)
0.0 0.4 GO:0042622 photoreceptor outer segment membrane(GO:0042622)
0.0 2.0 GO:0030864 cortical actin cytoskeleton(GO:0030864)
0.0 0.3 GO:0031089 platelet dense granule lumen(GO:0031089)
0.0 0.4 GO:0005639 integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) nuclear membrane part(GO:0044453)
0.0 2.2 GO:0032580 Golgi cisterna membrane(GO:0032580)
0.0 1.1 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 2.4 GO:0008076 voltage-gated potassium channel complex(GO:0008076) potassium channel complex(GO:0034705)
0.0 0.1 GO:0045298 host cell cytoplasm(GO:0030430) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell cytoplasm part(GO:0033655) tubulin complex(GO:0045298)
0.0 0.8 GO:0031941 filamentous actin(GO:0031941)
0.0 0.3 GO:0031618 nuclear pericentric heterochromatin(GO:0031618)
0.0 0.2 GO:0031235 intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235)
0.0 2.1 GO:0043204 perikaryon(GO:0043204)
0.0 0.3 GO:0032839 dendrite cytoplasm(GO:0032839)
0.0 0.6 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.3 GO:0071782 endoplasmic reticulum tubular network(GO:0071782)
0.0 0.1 GO:0031462 Cul2-RING ubiquitin ligase complex(GO:0031462)
0.0 0.2 GO:0031045 dense core granule(GO:0031045)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.7 GO:0031672 A band(GO:0031672)
0.0 0.0 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 0.3 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 5.4 GO:0005924 cell-substrate adherens junction(GO:0005924) focal adhesion(GO:0005925)

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 8.2 GO:1903224 regulation of endodermal cell differentiation(GO:1903224)
1.4 6.9 GO:0036072 intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.9 4.3 GO:0035582 sequestering of BMP in extracellular matrix(GO:0035582)
0.8 3.2 GO:0014816 skeletal muscle satellite cell differentiation(GO:0014816) regulation of skeletal muscle tissue growth(GO:0048631)
0.8 3.2 GO:0061304 retinal blood vessel morphogenesis(GO:0061304)
0.8 3.9 GO:0035989 tendon development(GO:0035989)
0.7 5.7 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.7 2.7 GO:1900127 positive regulation of hyaluronan biosynthetic process(GO:1900127)
0.6 1.9 GO:0060940 epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.6 1.8 GO:0035793 positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway(GO:0035793) regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway(GO:1900238) positive regulation of metanephric mesenchymal cell migration(GO:2000591)
0.5 17.6 GO:0030199 collagen fibril organization(GO:0030199)
0.4 1.3 GO:0050923 cerebral cortex tangential migration using cell-cell interactions(GO:0021823) postnatal olfactory bulb interneuron migration(GO:0021827) chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836) regulation of negative chemotaxis(GO:0050923)
0.4 2.9 GO:2001137 positive regulation of endocytic recycling(GO:2001137)
0.4 1.6 GO:0036343 psychomotor behavior(GO:0036343)
0.4 3.8 GO:0036066 protein O-linked fucosylation(GO:0036066)
0.3 3.2 GO:0070836 caveola assembly(GO:0070836)
0.3 1.3 GO:0050653 chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0050653)
0.3 0.9 GO:0098935 dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937)
0.3 1.7 GO:0010724 regulation of definitive erythrocyte differentiation(GO:0010724)
0.3 1.8 GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014)
0.2 1.7 GO:0045048 protein insertion into ER membrane(GO:0045048)
0.2 1.2 GO:1901906 diadenosine polyphosphate catabolic process(GO:0015961) diphosphoinositol polyphosphate metabolic process(GO:0071543) diadenosine pentaphosphate metabolic process(GO:1901906) diadenosine pentaphosphate catabolic process(GO:1901907) diadenosine hexaphosphate metabolic process(GO:1901908) diadenosine hexaphosphate catabolic process(GO:1901909) adenosine 5'-(hexahydrogen pentaphosphate) metabolic process(GO:1901910) adenosine 5'-(hexahydrogen pentaphosphate) catabolic process(GO:1901911)
0.2 2.3 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000)
0.2 0.8 GO:0099525 presynaptic dense core granule exocytosis(GO:0099525)
0.2 1.0 GO:0007161 calcium-independent cell-matrix adhesion(GO:0007161) germ cell migration(GO:0008354) regulation of collagen catabolic process(GO:0010710)
0.2 2.4 GO:0032060 bleb assembly(GO:0032060)
0.2 0.7 GO:1901165 positive regulation of trophoblast cell migration(GO:1901165)
0.2 1.7 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063)
0.2 0.7 GO:1903778 protein localization to vacuolar membrane(GO:1903778)
0.2 2.6 GO:0070831 basement membrane assembly(GO:0070831)
0.2 1.0 GO:0007296 vitellogenesis(GO:0007296)
0.2 3.4 GO:0007171 activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171)
0.2 0.5 GO:0010621 negative regulation of transcription by transcription factor localization(GO:0010621)
0.1 1.0 GO:0070294 renal sodium ion absorption(GO:0070294)
0.1 1.5 GO:0061314 Notch signaling involved in heart development(GO:0061314)
0.1 0.7 GO:1903361 protein localization to basolateral plasma membrane(GO:1903361)
0.1 0.6 GO:0035973 aggrephagy(GO:0035973)
0.1 1.6 GO:0071711 basement membrane organization(GO:0071711)
0.1 0.3 GO:0051541 elastin metabolic process(GO:0051541)
0.1 0.4 GO:1903248 regulation of cellular amine catabolic process(GO:0033241) negative regulation of cellular amine catabolic process(GO:0033242) negative regulation of the force of heart contraction(GO:0098736) regulation of arginine catabolic process(GO:1900081) negative regulation of arginine catabolic process(GO:1900082) regulation of citrulline biosynthetic process(GO:1903248) negative regulation of citrulline biosynthetic process(GO:1903249) negative regulation of cellular amino acid biosynthetic process(GO:2000283)
0.1 0.9 GO:0060011 Sertoli cell proliferation(GO:0060011)
0.1 1.4 GO:0045176 apical protein localization(GO:0045176)
0.1 1.2 GO:2000304 positive regulation of sphingolipid biosynthetic process(GO:0090154) positive regulation of ceramide biosynthetic process(GO:2000304)
0.1 1.1 GO:0045915 positive regulation of catecholamine metabolic process(GO:0045915) positive regulation of dopamine metabolic process(GO:0045964)
0.1 3.1 GO:0048011 neurotrophin TRK receptor signaling pathway(GO:0048011)
0.1 3.6 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 0.8 GO:0060160 negative regulation of dopamine receptor signaling pathway(GO:0060160)
0.1 0.6 GO:0048050 post-embryonic eye morphogenesis(GO:0048050)
0.1 0.4 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.5 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 1.6 GO:0042340 keratan sulfate catabolic process(GO:0042340)
0.1 1.2 GO:0035878 nail development(GO:0035878)
0.1 0.8 GO:0072383 plus-end-directed vesicle transport along microtubule(GO:0072383)
0.1 0.7 GO:0003065 positive regulation of heart rate by epinephrine(GO:0003065)
0.1 0.2 GO:1901491 negative regulation of lymphangiogenesis(GO:1901491)
0.1 0.6 GO:0021740 trigeminal sensory nucleus development(GO:0021730) principal sensory nucleus of trigeminal nerve development(GO:0021740) negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795)
0.1 0.6 GO:0072733 response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
0.1 0.2 GO:1900169 regulation of glucocorticoid mediated signaling pathway(GO:1900169)
0.1 0.3 GO:0031291 Ran protein signal transduction(GO:0031291)
0.1 0.2 GO:1902309 regulation of heart rate by hormone(GO:0003064) negative regulation of peptidyl-serine dephosphorylation(GO:1902309)
0.1 0.4 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.1 0.2 GO:0072092 ureteric bud invasion(GO:0072092)
0.1 0.5 GO:0043585 negative regulation of activin receptor signaling pathway(GO:0032926) nose morphogenesis(GO:0043585)
0.1 0.8 GO:0051056 regulation of small GTPase mediated signal transduction(GO:0051056)
0.1 3.1 GO:0006509 membrane protein ectodomain proteolysis(GO:0006509)
0.1 0.3 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 1.0 GO:0060716 labyrinthine layer blood vessel development(GO:0060716)
0.1 0.4 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.2 GO:0044805 late nucleophagy(GO:0044805)
0.1 3.4 GO:0030574 collagen catabolic process(GO:0030574)
0.1 0.8 GO:0070327 thyroid hormone transport(GO:0070327)
0.1 0.7 GO:0061635 regulation of protein complex stability(GO:0061635)
0.1 0.6 GO:0051597 response to methylmercury(GO:0051597)
0.1 1.1 GO:0051901 positive regulation of mitochondrial depolarization(GO:0051901)
0.1 0.8 GO:0010839 negative regulation of keratinocyte proliferation(GO:0010839)
0.1 2.6 GO:0010107 potassium ion import(GO:0010107)
0.1 0.6 GO:0006451 selenocysteine incorporation(GO:0001514) translational readthrough(GO:0006451)
0.1 0.3 GO:1902669 positive regulation of axon guidance(GO:1902669)
0.1 0.3 GO:0001886 endothelial cell morphogenesis(GO:0001886)
0.1 0.8 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 0.2 GO:0061743 motor learning(GO:0061743)
0.1 0.5 GO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching(GO:0060666)
0.0 0.5 GO:0034983 peptidyl-lysine deacetylation(GO:0034983)
0.0 0.4 GO:0070236 regulation of activation-induced cell death of T cells(GO:0070235) negative regulation of activation-induced cell death of T cells(GO:0070236)
0.0 2.0 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.0 2.2 GO:0071377 cellular response to glucagon stimulus(GO:0071377)
0.0 0.5 GO:0033008 positive regulation of mast cell activation involved in immune response(GO:0033008) positive regulation of mast cell degranulation(GO:0043306)
0.0 0.2 GO:0043323 regulation of natural killer cell degranulation(GO:0043321) positive regulation of natural killer cell degranulation(GO:0043323)
0.0 0.1 GO:0090206 negative regulation of cholesterol biosynthetic process(GO:0045541) negative regulation of cholesterol metabolic process(GO:0090206)
0.0 0.2 GO:0042473 outer ear morphogenesis(GO:0042473)
0.0 0.7 GO:0006853 carnitine shuttle(GO:0006853)
0.0 0.2 GO:0072719 copper ion import(GO:0015677) cellular response to cisplatin(GO:0072719)
0.0 0.8 GO:0051764 actin crosslink formation(GO:0051764)
0.0 0.7 GO:0035024 negative regulation of Rho protein signal transduction(GO:0035024)
0.0 0.1 GO:0032455 nerve growth factor processing(GO:0032455)
0.0 1.4 GO:0097178 ruffle assembly(GO:0097178)
0.0 0.3 GO:0034086 maintenance of sister chromatid cohesion(GO:0034086) maintenance of mitotic sister chromatid cohesion(GO:0034088)
0.0 0.1 GO:0010641 positive regulation of platelet-derived growth factor receptor signaling pathway(GO:0010641)
0.0 0.7 GO:0033622 integrin activation(GO:0033622)
0.0 0.5 GO:0030208 dermatan sulfate biosynthetic process(GO:0030208)
0.0 0.5 GO:0035635 entry of bacterium into host cell(GO:0035635)
0.0 4.0 GO:0030509 BMP signaling pathway(GO:0030509)
0.0 0.2 GO:0070544 histone H3-K36 demethylation(GO:0070544)
0.0 0.1 GO:0039534 negative regulation of MDA-5 signaling pathway(GO:0039534)
0.0 0.8 GO:0036152 phosphatidylethanolamine acyl-chain remodeling(GO:0036152)
0.0 0.1 GO:0015808 L-alanine transport(GO:0015808)
0.0 0.6 GO:1902590 viral budding(GO:0046755) multi-organism organelle organization(GO:1902590) multi-organism membrane budding(GO:1902592)
0.0 0.5 GO:0007095 mitotic G2 DNA damage checkpoint(GO:0007095)
0.0 0.2 GO:1904781 positive regulation of protein localization to centrosome(GO:1904781)
0.0 0.6 GO:0044342 type B pancreatic cell proliferation(GO:0044342)
0.0 0.8 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 3.5 GO:0007498 mesoderm development(GO:0007498)
0.0 0.4 GO:0090136 epithelial cell-cell adhesion(GO:0090136)
0.0 0.1 GO:1900736 regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900736)
0.0 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.8 GO:0032007 negative regulation of TOR signaling(GO:0032007)
0.0 1.6 GO:0007368 determination of left/right symmetry(GO:0007368)
0.0 0.1 GO:0048549 positive regulation of pinocytosis(GO:0048549)
0.0 0.2 GO:0042475 odontogenesis of dentin-containing tooth(GO:0042475)
0.0 0.8 GO:0051894 positive regulation of focal adhesion assembly(GO:0051894)
0.0 0.3 GO:2000394 positive regulation of lamellipodium morphogenesis(GO:2000394)
0.0 1.2 GO:0032728 positive regulation of interferon-beta production(GO:0032728)
0.0 0.9 GO:0007520 myoblast fusion(GO:0007520)
0.0 0.4 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.2 GO:0035090 maintenance of apical/basal cell polarity(GO:0035090) maintenance of epithelial cell apical/basal polarity(GO:0045199)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0031339 negative regulation of vesicle fusion(GO:0031339)
0.0 0.1 GO:0007256 activation of JNKK activity(GO:0007256)
0.0 0.2 GO:0001578 microtubule bundle formation(GO:0001578)
0.0 1.8 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.1 GO:0021869 forebrain ventricular zone progenitor cell division(GO:0021869)
0.0 0.2 GO:0022038 corpus callosum development(GO:0022038)
0.0 0.3 GO:0010510 regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) regulation of acyl-CoA biosynthetic process(GO:0050812)
0.0 0.8 GO:0015949 nucleobase-containing small molecule interconversion(GO:0015949)
0.0 0.7 GO:0051496 positive regulation of stress fiber assembly(GO:0051496)
0.0 0.5 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.0 0.3 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.2 GO:0060087 relaxation of vascular smooth muscle(GO:0060087) negative regulation of platelet aggregation(GO:0090331)
0.0 1.4 GO:0030516 regulation of axon extension(GO:0030516)
0.0 0.7 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.0 0.0 GO:0010898 positive regulation of triglyceride catabolic process(GO:0010898)
0.0 0.1 GO:0048642 negative regulation of skeletal muscle tissue development(GO:0048642)
0.0 0.2 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.0 0.1 GO:0000414 regulation of histone H3-K36 methylation(GO:0000414)
0.0 0.4 GO:0035590 purinergic nucleotide receptor signaling pathway(GO:0035590)
0.0 0.1 GO:0019086 late viral transcription(GO:0019086)
0.0 0.4 GO:0030866 cortical actin cytoskeleton organization(GO:0030866)
0.0 0.4 GO:0032467 positive regulation of cytokinesis(GO:0032467)
0.0 0.1 GO:1901475 pyruvate transport(GO:0006848) pyruvate transmembrane transport(GO:1901475)
0.0 1.0 GO:0010923 negative regulation of phosphatase activity(GO:0010923)
0.0 0.5 GO:0006376 mRNA splice site selection(GO:0006376)
0.0 0.0 GO:0034227 tRNA thio-modification(GO:0034227)
0.0 0.1 GO:0036093 male germ cell proliferation(GO:0002176) germ cell proliferation(GO:0036093)
0.0 0.1 GO:1903800 positive regulation of production of miRNAs involved in gene silencing by miRNA(GO:1903800)
0.0 0.5 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.4 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.1 GO:0010915 regulation of very-low-density lipoprotein particle clearance(GO:0010915) negative regulation of very-low-density lipoprotein particle clearance(GO:0010916) positive regulation of beta-amyloid clearance(GO:1900223)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.2 GO:1901897 regulation of relaxation of cardiac muscle(GO:1901897)
0.0 0.1 GO:0034380 high-density lipoprotein particle assembly(GO:0034380)
0.0 0.9 GO:0055072 iron ion homeostasis(GO:0055072)
0.0 0.1 GO:2000210 positive regulation of anoikis(GO:2000210)
0.0 0.7 GO:0022617 extracellular matrix disassembly(GO:0022617)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 39.1 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.2 3.2 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.2 6.6 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP
0.1 0.6 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.1 3.5 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.1 1.5 REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
0.1 4.4 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.1 2.7 REACTOME HYALURONAN METABOLISM Genes involved in Hyaluronan metabolism
0.1 1.6 REACTOME KERATAN SULFATE DEGRADATION Genes involved in Keratan sulfate degradation
0.1 2.3 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.1 3.0 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.1 2.2 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.1 1.6 REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GLP1 Genes involved in Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1)
0.1 3.0 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.4 REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS Genes involved in Membrane binding and targetting of GAG proteins
0.1 1.8 REACTOME CHONDROITIN SULFATE BIOSYNTHESIS Genes involved in Chondroitin sulfate biosynthesis
0.1 1.9 REACTOME HS GAG BIOSYNTHESIS Genes involved in HS-GAG biosynthesis
0.1 1.0 REACTOME G BETA GAMMA SIGNALLING THROUGH PI3KGAMMA Genes involved in G beta:gamma signalling through PI3Kgamma
0.1 6.1 REACTOME INTEGRIN CELL SURFACE INTERACTIONS Genes involved in Integrin cell surface interactions
0.0 1.2 REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Extrinsic Pathway for Apoptosis
0.0 1.4 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation
0.0 1.5 REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.0 0.6 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.0 0.4 REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS Genes involved in Elevation of cytosolic Ca2+ levels
0.0 0.9 REACTOME DOWNSTREAM SIGNAL TRANSDUCTION Genes involved in Downstream signal transduction
0.0 0.7 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.0 0.5 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.8 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.0 0.8 REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Glutamate Neurotransmitter Release Cycle
0.0 0.8 REACTOME KINESINS Genes involved in Kinesins
0.0 0.6 REACTOME AMINE DERIVED HORMONES Genes involved in Amine-derived hormones
0.0 0.6 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.8 REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates
0.0 0.4 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.3 REACTOME SHC1 EVENTS IN ERBB4 SIGNALING Genes involved in SHC1 events in ERBB4 signaling
0.0 0.4 REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS Genes involved in Synthesis of very long-chain fatty acyl-CoAs
0.0 0.3 REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0 0.2 REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.0 0.9 REACTOME SMOOTH MUSCLE CONTRACTION Genes involved in Smooth Muscle Contraction
0.0 1.4 REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 Genes involved in Response to elevated platelet cytosolic Ca2+