ENCODE cell lines, expression (Ernst 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
BATF3
|
ENSG00000123685.4 | BATF3 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BATF3 | hg19_v2_chr1_-_212873267_212873332 | -0.46 | 7.2e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_99381660 | 1.66 |
ENST00000375240.3 ENST00000463569.1 |
CDC14B |
cell division cycle 14B |
chr10_+_123923105 | 0.98 |
ENST00000368999.1 |
TACC2 |
transforming, acidic coiled-coil containing protein 2 |
chr10_+_123922941 | 0.92 |
ENST00000360561.3 |
TACC2 |
transforming, acidic coiled-coil containing protein 2 |
chr10_+_123923205 | 0.89 |
ENST00000369004.3 ENST00000260733.3 |
TACC2 |
transforming, acidic coiled-coil containing protein 2 |
chr11_+_12696102 | 0.87 |
ENST00000527636.1 ENST00000527376.1 |
TEAD1 |
TEA domain family member 1 (SV40 transcriptional enhancer factor) |
chr14_+_68086515 | 0.83 |
ENST00000261783.3 |
ARG2 |
arginase 2 |
chr16_+_3068393 | 0.80 |
ENST00000573001.1 |
TNFRSF12A |
tumor necrosis factor receptor superfamily, member 12A |
chr11_+_12695944 | 0.71 |
ENST00000361905.4 |
TEAD1 |
TEA domain family member 1 (SV40 transcriptional enhancer factor) |
chr5_-_172198190 | 0.71 |
ENST00000239223.3 |
DUSP1 |
dual specificity phosphatase 1 |
chr22_+_38597889 | 0.68 |
ENST00000338483.2 ENST00000538320.1 ENST00000538999.1 ENST00000441709.1 |
MAFF |
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
chr1_+_228353495 | 0.51 |
ENST00000366711.3 |
IBA57 |
IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae) |
chr12_+_10365404 | 0.45 |
ENST00000266458.5 ENST00000421801.2 ENST00000544284.1 ENST00000545047.1 ENST00000543602.1 ENST00000545887.1 |
GABARAPL1 |
GABA(A) receptor-associated protein like 1 |
chr19_-_18392422 | 0.36 |
ENST00000252818.3 |
JUND |
jun D proto-oncogene |
chr18_+_76829441 | 0.32 |
ENST00000458297.2 |
ATP9B |
ATPase, class II, type 9B |
chr2_-_98280383 | 0.29 |
ENST00000289228.5 |
ACTR1B |
ARP1 actin-related protein 1 homolog B, centractin beta (yeast) |
chr6_-_31940065 | 0.26 |
ENST00000375349.3 ENST00000337523.5 |
DXO |
decapping exoribonuclease |
chr1_+_110527308 | 0.24 |
ENST00000369799.5 |
AHCYL1 |
adenosylhomocysteinase-like 1 |
chr3_-_119182523 | 0.23 |
ENST00000319172.5 |
TMEM39A |
transmembrane protein 39A |
chr19_+_18723660 | 0.21 |
ENST00000262817.3 |
TMEM59L |
transmembrane protein 59-like |
chr6_-_31939734 | 0.21 |
ENST00000375356.3 |
DXO |
decapping exoribonuclease |
chr12_+_7282795 | 0.21 |
ENST00000266546.6 |
CLSTN3 |
calsyntenin 3 |
chr6_+_32939964 | 0.20 |
ENST00000607833.1 |
BRD2 |
bromodomain containing 2 |
chr17_-_49124230 | 0.19 |
ENST00000510283.1 ENST00000510855.1 |
SPAG9 |
sperm associated antigen 9 |
chr19_-_460996 | 0.18 |
ENST00000264554.6 |
SHC2 |
SHC (Src homology 2 domain containing) transforming protein 2 |
chr5_-_175964366 | 0.17 |
ENST00000274811.4 |
RNF44 |
ring finger protein 44 |
chr15_-_66790146 | 0.17 |
ENST00000316634.5 |
SNAPC5 |
small nuclear RNA activating complex, polypeptide 5, 19kDa |
chr14_+_20811722 | 0.16 |
ENST00000429687.3 |
PARP2 |
poly (ADP-ribose) polymerase 2 |
chr14_+_20811766 | 0.16 |
ENST00000250416.5 ENST00000527915.1 |
PARP2 |
poly (ADP-ribose) polymerase 2 |
chr9_-_100684845 | 0.15 |
ENST00000375119.3 |
C9orf156 |
chromosome 9 open reading frame 156 |
chr15_-_42840961 | 0.15 |
ENST00000563454.1 ENST00000397130.3 ENST00000570160.1 ENST00000323443.2 |
LRRC57 |
leucine rich repeat containing 57 |
chr15_-_34394119 | 0.14 |
ENST00000256545.4 |
EMC7 |
ER membrane protein complex subunit 7 |
chr20_+_42219559 | 0.14 |
ENST00000373030.3 ENST00000373039.4 |
IFT52 |
intraflagellar transport 52 homolog (Chlamydomonas) |
chr4_-_39367949 | 0.14 |
ENST00000503784.1 ENST00000349703.2 ENST00000381897.1 |
RFC1 |
replication factor C (activator 1) 1, 145kDa |
chr15_+_42841008 | 0.13 |
ENST00000260372.3 ENST00000568876.1 ENST00000568846.2 ENST00000562398.1 |
HAUS2 |
HAUS augmin-like complex, subunit 2 |
chr11_+_28129795 | 0.11 |
ENST00000406787.3 ENST00000342303.5 ENST00000403099.1 ENST00000407364.3 |
METTL15 |
methyltransferase like 15 |
chr15_-_34394008 | 0.11 |
ENST00000527822.1 ENST00000528949.1 |
EMC7 |
ER membrane protein complex subunit 7 |
chr4_-_2010562 | 0.10 |
ENST00000411649.1 ENST00000542778.1 ENST00000411638.2 ENST00000431323.1 |
NELFA |
negative elongation factor complex member A |
chr8_-_67090825 | 0.10 |
ENST00000276571.3 |
CRH |
corticotropin releasing hormone |
chr2_+_70142189 | 0.09 |
ENST00000264444.2 |
MXD1 |
MAX dimerization protein 1 |
chr6_+_31939608 | 0.09 |
ENST00000375331.2 ENST00000375333.2 |
STK19 |
serine/threonine kinase 19 |
chr11_+_102217936 | 0.09 |
ENST00000532832.1 ENST00000530675.1 ENST00000533742.1 ENST00000227758.2 ENST00000532672.1 ENST00000531259.1 ENST00000527465.1 |
BIRC2 |
baculoviral IAP repeat containing 2 |
chr2_+_70142232 | 0.07 |
ENST00000540449.1 |
MXD1 |
MAX dimerization protein 1 |
chr2_-_43823093 | 0.06 |
ENST00000405006.4 |
THADA |
thyroid adenoma associated |
chr2_-_43823119 | 0.06 |
ENST00000403856.1 ENST00000404790.1 ENST00000405975.2 ENST00000415080.2 |
THADA |
thyroid adenoma associated |
chr14_-_24732368 | 0.05 |
ENST00000544573.1 |
TGM1 |
transglutaminase 1 |
chr2_-_74757066 | 0.05 |
ENST00000377526.3 |
AUP1 |
ancient ubiquitous protein 1 |
chr19_-_49622348 | 0.05 |
ENST00000408991.2 |
C19orf73 |
chromosome 19 open reading frame 73 |
chr8_+_37594130 | 0.05 |
ENST00000518526.1 ENST00000523887.1 ENST00000276461.5 |
ERLIN2 |
ER lipid raft associated 2 |
chr19_+_8455077 | 0.02 |
ENST00000328024.6 |
RAB11B |
RAB11B, member RAS oncogene family |
chr11_-_85376121 | 0.02 |
ENST00000527447.1 |
CREBZF |
CREB/ATF bZIP transcription factor |
chr18_+_76829385 | 0.01 |
ENST00000426216.2 ENST00000307671.7 ENST00000586672.1 ENST00000586722.1 |
ATP9B |
ATPase, class II, type 9B |
chr17_+_29421987 | 0.01 |
ENST00000431387.4 |
NF1 |
neurofibromin 1 |
chr3_-_101405539 | 0.01 |
ENST00000469605.1 ENST00000495401.1 ENST00000394077.3 |
RPL24 |
ribosomal protein L24 |
chr7_-_93633658 | 0.00 |
ENST00000433727.1 |
BET1 |
Bet1 golgi vesicular membrane trafficking protein |
chr14_-_24732403 | 0.00 |
ENST00000206765.6 |
TGM1 |
transglutaminase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 0.7 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.7 | GO:0008330 | protein tyrosine/threonine phosphatase activity(GO:0008330) |
0.2 | 0.5 | GO:0034353 | RNA pyrophosphohydrolase activity(GO:0034353) |
0.1 | 0.3 | GO:1990404 | protein ADP-ribosylase activity(GO:1990404) |
0.1 | 1.6 | GO:0001134 | transcription factor activity, transcription factor recruiting(GO:0001134) |
0.1 | 0.8 | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813) |
0.0 | 0.2 | GO:0004013 | adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802) |
0.0 | 1.7 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.0 | 0.1 | GO:0016434 | rRNA (cytosine) methyltransferase activity(GO:0016434) |
0.0 | 0.5 | GO:0030957 | Tat protein binding(GO:0030957) |
0.0 | 0.1 | GO:0098770 | FBXO family protein binding(GO:0098770) |
0.0 | 0.1 | GO:0003689 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
0.0 | 0.2 | GO:0005078 | MAP-kinase scaffold activity(GO:0005078) |
0.0 | 0.3 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.0 | 0.4 | GO:0016922 | ligand-dependent nuclear receptor binding(GO:0016922) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.4 | GO:0071850 | mitotic cell cycle arrest(GO:0071850) |
0.1 | 0.3 | GO:0018312 | peptidyl-serine ADP-ribosylation(GO:0018312) |
0.1 | 0.8 | GO:0006931 | substrate-dependent cell migration, cell attachment to substrate(GO:0006931) |
0.1 | 0.8 | GO:0000050 | urea cycle(GO:0000050) |
0.0 | 1.6 | GO:1902895 | positive regulation of pri-miRNA transcription from RNA polymerase II promoter(GO:1902895) |
0.0 | 0.1 | GO:0035720 | intraciliary anterograde transport(GO:0035720) |
0.0 | 0.2 | GO:0033353 | S-adenosylmethionine cycle(GO:0033353) |
0.0 | 0.1 | GO:0051462 | cortisol secretion(GO:0043400) positive regulation of corticotropin secretion(GO:0051461) regulation of cortisol secretion(GO:0051462) negative regulation of glucagon secretion(GO:0070093) cellular response to cocaine(GO:0071314) positive regulation of corticosterone secretion(GO:2000854) |
0.0 | 0.1 | GO:1901895 | negative regulation of calcium-transporting ATPase activity(GO:1901895) |
0.0 | 0.1 | GO:1902523 | positive regulation of protein K63-linked ubiquitination(GO:1902523) |
0.0 | 0.5 | GO:0071028 | nuclear RNA surveillance(GO:0071027) nuclear mRNA surveillance(GO:0071028) |
0.0 | 0.7 | GO:0007567 | parturition(GO:0007567) |
0.0 | 0.2 | GO:0090074 | negative regulation of protein homodimerization activity(GO:0090074) |
0.0 | 0.5 | GO:0031163 | iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163) |
0.0 | 0.2 | GO:1902474 | positive regulation of protein localization to synapse(GO:1902474) |
0.0 | 0.2 | GO:0006384 | transcription initiation from RNA polymerase III promoter(GO:0006384) |
0.0 | 0.1 | GO:0043163 | cell envelope organization(GO:0043163) external encapsulating structure organization(GO:0045229) |
0.0 | 2.7 | GO:0021987 | cerebral cortex development(GO:0021987) |
0.0 | 0.1 | GO:0070475 | rRNA base methylation(GO:0070475) |
0.0 | 0.5 | GO:0097352 | autophagosome maturation(GO:0097352) |
0.0 | 0.4 | GO:0002076 | osteoblast development(GO:0002076) |
0.0 | 0.3 | GO:0034204 | lipid translocation(GO:0034204) phospholipid translocation(GO:0045332) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.6 | GO:0071148 | TEAD-1-YAP complex(GO:0071148) |
0.0 | 0.4 | GO:0035976 | AP1 complex(GO:0035976) |
0.0 | 0.3 | GO:0072546 | ER membrane protein complex(GO:0072546) |
0.0 | 0.1 | GO:0005663 | DNA replication factor C complex(GO:0005663) |
0.0 | 0.1 | GO:0032021 | NELF complex(GO:0032021) |
0.0 | 0.3 | GO:0005869 | dynactin complex(GO:0005869) |
0.0 | 0.1 | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane(GO:0098554) |
0.0 | 0.1 | GO:0070652 | HAUS complex(GO:0070652) |
0.0 | 0.5 | GO:0032839 | dendrite cytoplasm(GO:0032839) |
0.0 | 0.1 | GO:0043196 | varicosity(GO:0043196) |
0.0 | 0.1 | GO:0044292 | dendrite terminus(GO:0044292) |
0.0 | 1.1 | GO:0072686 | mitotic spindle(GO:0072686) |
0.0 | 0.1 | GO:0000836 | Hrd1p ubiquitin ligase complex(GO:0000836) |