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ENCODE cell lines, expression (Ernst 2011)

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Results for CAGUCCA

Z-value: 0.22

Motif logo

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miRNA associated with seed CAGUCCA

NamemiRBASE accession
hsa-miR-455-3p.1
MIMAT0004784

Activity profile of CAGUCCA motif

Sorted Z-values of CAGUCCA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of CAGUCCA

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr9_-_14314066 0.33 ENST00000397575.3
 NFIB
 nuclear factor I/B
chr1_-_20812690 0.28 ENST00000375078.3
 CAMK2N1
 calcium/calmodulin-dependent protein kinase II inhibitor 1
chr4_-_177713788 0.26 ENST00000280193.2
 VEGFC
 vascular endothelial growth factor C
chr1_-_17304771 0.22 ENST00000375534.3
 MFAP2
 microfibrillar-associated protein 2
chr20_-_23066953 0.15 ENST00000246006.4
 CD93
 CD93 molecule
chr19_-_43969796 0.15 ENST00000244333.3
 LYPD3
 LY6/PLAUR domain containing 3
chr6_-_10415470 0.14 ENST00000379604.2
ENST00000379613.3
 TFAP2A
 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
chr20_+_6748311 0.13 ENST00000378827.4
 BMP2
 bone morphogenetic protein 2
chr8_-_82395461 0.12 ENST00000256104.4
 FABP4
 fatty acid binding protein 4, adipocyte
chr19_+_48281842 0.11 ENST00000509570.2
 SEPW1
 selenoprotein W, 1
chr6_+_76458909 0.11 ENST00000369981.3
ENST00000369985.4
 MYO6
 myosin VI
chr18_-_500692 0.10 ENST00000400256.3
 COLEC12
 collectin sub-family member 12
chr2_+_85360499 0.09 ENST00000282111.3
 TCF7L1
 transcription factor 7-like 1 (T-cell specific, HMG-box)
chr9_+_103204553 0.09 ENST00000502978.1
ENST00000334943.6
 MSANTD3-TMEFF1
TMEFF1
 MSANTD3-TMEFF1 readthrough
transmembrane protein with EGF-like and two follistatin-like domains 1
chr1_+_155290677 0.08 ENST00000368354.3
ENST00000368352.5
 RUSC1
 RUN and SH3 domain containing 1
chr4_+_124320665 0.08 ENST00000394339.2
 SPRY1
 sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr15_+_96873921 0.08 ENST00000394166.3
 NR2F2
 nuclear receptor subfamily 2, group F, member 2
chr10_-_33246722 0.07 ENST00000437302.1
ENST00000396033.2
 ITGB1
 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
chr3_-_79068594 0.06 ENST00000436010.2
 ROBO1
 roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr8_-_93115445 0.06 ENST00000523629.1
 RUNX1T1
 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr14_+_58666824 0.06 ENST00000254286.4
 ACTR10
 actin-related protein 10 homolog (S. cerevisiae)
chr2_-_55237484 0.06 ENST00000394609.2
 RTN4
 reticulon 4
chr9_+_103235365 0.06 ENST00000374879.4
 TMEFF1
 transmembrane protein with EGF-like and two follistatin-like domains 1
chr2_+_219081817 0.06 ENST00000315717.5
ENST00000420104.1
ENST00000295685.10
 ARPC2
 actin related protein 2/3 complex, subunit 2, 34kDa
chr19_-_14629224 0.05 ENST00000254322.2
 DNAJB1
 DnaJ (Hsp40) homolog, subfamily B, member 1
chr11_-_79151695 0.05 ENST00000278550.7
 TENM4
 teneurin transmembrane protein 4
chrX_-_134049262 0.05 ENST00000370783.3
 MOSPD1
 motile sperm domain containing 1
chr14_+_23775971 0.05 ENST00000250405.5
 BCL2L2
 BCL2-like 2
chr19_+_13049413 0.05 ENST00000316448.5
ENST00000588454.1
 CALR
 calreticulin
chr14_+_65171099 0.05 ENST00000247226.7
 PLEKHG3
 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr16_-_79634595 0.04 ENST00000326043.4
ENST00000393350.1
 MAF
 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
chr1_-_150979333 0.04 ENST00000312210.5
 FAM63A
 family with sequence similarity 63, member A
chr5_+_92919043 0.04 ENST00000327111.3
 NR2F1
 nuclear receptor subfamily 2, group F, member 1
chr1_+_201979645 0.04 ENST00000367284.5
ENST00000367283.3
 ELF3
 E74-like factor 3 (ets domain transcription factor, epithelial-specific )
chr5_-_148930960 0.04 ENST00000261798.5
ENST00000377843.2
 CSNK1A1
 casein kinase 1, alpha 1
chr11_-_129062093 0.04 ENST00000310343.9
 ARHGAP32
 Rho GTPase activating protein 32
chr11_-_118966167 0.04 ENST00000530167.1
 H2AFX
 H2A histone family, member X
chr15_+_90931450 0.04 ENST00000268182.5
ENST00000560738.1
ENST00000560418.1
 IQGAP1
 IQ motif containing GTPase activating protein 1
chr19_+_7598890 0.03 ENST00000221249.6
ENST00000601668.1
ENST00000601001.1
 PNPLA6
 patatin-like phospholipase domain containing 6
chr16_-_31147020 0.03 ENST00000568261.1
ENST00000567797.1
ENST00000317508.6
 PRSS8
 protease, serine, 8
chr13_-_50367057 0.03 ENST00000261667.3
 KPNA3
 karyopherin alpha 3 (importin alpha 4)
chr20_+_306221 0.03 ENST00000342665.2
 SOX12
 SRY (sex determining region Y)-box 12
chr1_-_41131326 0.03 ENST00000372684.3
 RIMS3
 regulating synaptic membrane exocytosis 3
chr15_-_65809581 0.03 ENST00000341861.5
 DPP8
 dipeptidyl-peptidase 8
chr17_+_36508111 0.03 ENST00000331159.5
ENST00000577233.1
 SOCS7
 suppressor of cytokine signaling 7
chr6_-_90529418 0.03 ENST00000439638.1
ENST00000369393.3
ENST00000428876.1
 MDN1
 MDN1, midasin homolog (yeast)
chr3_-_122233723 0.03 ENST00000493510.1
ENST00000344337.6
ENST00000476916.1
ENST00000465882.1
 KPNA1
 karyopherin alpha 1 (importin alpha 5)
chr17_+_38375574 0.03 ENST00000323571.4
ENST00000585043.1
ENST00000394103.3
ENST00000536600.1
 WIPF2
 WAS/WASL interacting protein family, member 2
chrX_+_100474711 0.03 ENST00000402866.1
 DRP2
 dystrophin related protein 2
chr8_+_22409193 0.03 ENST00000240123.7
 SORBS3
 sorbin and SH3 domain containing 3
chrX_+_28605516 0.03 ENST00000378993.1
 IL1RAPL1
 interleukin 1 receptor accessory protein-like 1
chr22_-_39096661 0.03 ENST00000216039.5
 JOSD1
 Josephin domain containing 1
chr9_+_35749203 0.03 ENST00000456972.2
ENST00000378078.4
 RGP1
 RGP1 retrograde golgi transport homolog (S. cerevisiae)
chr17_-_73851285 0.02 ENST00000589642.1
ENST00000593002.1
ENST00000590221.1
ENST00000344296.4
ENST00000587374.1
ENST00000585462.1
ENST00000433525.2
ENST00000254806.3
 WBP2
 WW domain binding protein 2
chr19_+_45973120 0.02 ENST00000592811.1
ENST00000586615.1
 FOSB
 FBJ murine osteosarcoma viral oncogene homolog B
chr3_-_11762202 0.02 ENST00000445411.1
ENST00000404339.1
ENST00000273038.3
 VGLL4
 vestigial like 4 (Drosophila)
chr17_+_2240775 0.02 ENST00000268989.3
ENST00000426855.2
 SGSM2
 small G protein signaling modulator 2
chr17_+_27055798 0.02 ENST00000268766.6
 NEK8
 NIMA-related kinase 8
chr12_+_57984965 0.02 ENST00000540759.2
ENST00000551772.1
ENST00000550465.1
ENST00000354947.5
 PIP4K2C
 phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
chr19_-_46296011 0.02 ENST00000377735.3
ENST00000270223.6
 DMWD
 dystrophia myotonica, WD repeat containing
chr1_+_36273743 0.02 ENST00000373210.3
 AGO4
 argonaute RISC catalytic component 4
chr4_-_100871506 0.02 ENST00000296417.5
 H2AFZ
 H2A histone family, member Z
chr3_-_178984759 0.02 ENST00000349697.2
ENST00000497599.1
 KCNMB3
 potassium large conductance calcium-activated channel, subfamily M beta member 3
chr4_+_184020398 0.02 ENST00000403733.3
ENST00000378925.3
 WWC2
 WW and C2 domain containing 2
chr6_-_159421198 0.02 ENST00000252655.1
ENST00000297262.3
ENST00000367069.2
 RSPH3
 radial spoke 3 homolog (Chlamydomonas)
chr21_-_36260980 0.02 ENST00000344691.4
ENST00000358356.5
 RUNX1
 runt-related transcription factor 1
chr11_+_64126614 0.02 ENST00000528057.1
ENST00000334205.4
ENST00000294261.4
 RPS6KA4
 ribosomal protein S6 kinase, 90kDa, polypeptide 4
chr7_+_73242069 0.02 ENST00000435050.1
 CLDN4
 claudin 4
chr19_+_47421933 0.02 ENST00000404338.3
 ARHGAP35
 Rho GTPase activating protein 35
chr12_-_96794143 0.02 ENST00000543119.2
 CDK17
 cyclin-dependent kinase 17
chr15_+_62853562 0.02 ENST00000561311.1
 TLN2
 talin 2
chr2_-_131850951 0.01 ENST00000409185.1
ENST00000389915.3
 FAM168B
 family with sequence similarity 168, member B
chr17_-_41977964 0.01 ENST00000377184.3
 MPP2
 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chrX_+_153639856 0.01 ENST00000426834.1
ENST00000369790.4
ENST00000454722.1
ENST00000350743.4
ENST00000299328.5
ENST00000351413.4
 TAZ
 tafazzin
chr1_-_35658736 0.01 ENST00000357214.5
 SFPQ
 splicing factor proline/glutamine-rich
chr15_+_49170083 0.01 ENST00000530028.2
 EID1
 EP300 interacting inhibitor of differentiation 1
chr11_-_118305921 0.01 ENST00000532619.1
 RP11-770J1.4
 RP11-770J1.4
chr1_+_153700518 0.01 ENST00000318967.2
ENST00000456435.1
ENST00000435409.2
 INTS3
 integrator complex subunit 3
chr11_+_125439298 0.01 ENST00000278903.6
ENST00000343678.4
ENST00000524723.1
ENST00000527842.2
 EI24
 etoposide induced 2.4
chrX_+_48554986 0.01 ENST00000376687.3
ENST00000453214.2
 SUV39H1
 suppressor of variegation 3-9 homolog 1 (Drosophila)
chrX_+_16804544 0.01 ENST00000380122.5
ENST00000398155.4
 TXLNG
 taxilin gamma
chr9_-_104145795 0.01 ENST00000259407.2
 BAAT
 bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
chr8_-_30670384 0.01 ENST00000221138.4
ENST00000518243.1
 PPP2CB
 protein phosphatase 2, catalytic subunit, beta isozyme
chr12_+_120933904 0.01 ENST00000550178.1
ENST00000550845.1
ENST00000549989.1
ENST00000552870.1
 DYNLL1
 dynein, light chain, LC8-type 1
chr5_+_179921430 0.01 ENST00000393356.1
 CNOT6
 CCR4-NOT transcription complex, subunit 6
chr22_+_45559722 0.01 ENST00000347635.4
ENST00000407019.2
ENST00000424634.1
ENST00000417702.1
ENST00000425733.2
ENST00000430547.1
 NUP50
 nucleoporin 50kDa
chr9_+_82186872 0.01 ENST00000376544.3
ENST00000376520.4
 TLE4
 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr17_-_46671323 0.01 ENST00000239151.5
 HOXB5
 homeobox B5
chr6_-_33168391 0.01 ENST00000374685.4
ENST00000413614.2
ENST00000374680.3
 RXRB
 retinoid X receptor, beta
chr2_+_27440229 0.01 ENST00000264705.4
ENST00000403525.1
 CAD
 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr2_-_69870835 0.01 ENST00000409085.4
ENST00000406297.3
 AAK1
 AP2 associated kinase 1
chr17_-_48943706 0.01 ENST00000499247.2
 TOB1
 transducer of ERBB2, 1
chr11_-_118047376 0.01 ENST00000278947.5
 SCN2B
 sodium channel, voltage-gated, type II, beta subunit
chr8_+_67579807 0.01 ENST00000519289.1
ENST00000519561.1
ENST00000521889.1
 C8orf44-SGK3
C8orf44
 C8orf44-SGK3 readthrough
chromosome 8 open reading frame 44
chrX_-_48824793 0.01 ENST00000376477.1
 KCND1
 potassium voltage-gated channel, Shal-related subfamily, member 1
chr2_+_61404624 0.01 ENST00000394457.3
 AHSA2
 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
chr1_-_115300592 0.01 ENST00000261443.5
ENST00000534699.1
ENST00000339438.6
ENST00000529046.1
ENST00000525970.1
ENST00000369530.1
ENST00000530886.1
 CSDE1
 cold shock domain containing E1, RNA-binding
chr9_+_132565418 0.01 ENST00000259339.2
 TOR1B
 torsin family 1, member B (torsin B)
chr6_-_114292449 0.00 ENST00000519065.1
 HDAC2
 histone deacetylase 2
chr8_+_145515263 0.00 ENST00000528838.1
 HSF1
 heat shock transcription factor 1
chr9_-_16870704 0.00 ENST00000380672.4
ENST00000380667.2
ENST00000380666.2
ENST00000486514.1
 BNC2
 basonuclin 2
chr2_-_225450013 0.00 ENST00000264414.4
 CUL3
 cullin 3
chrX_+_69664706 0.00 ENST00000194900.4
ENST00000374360.3
 DLG3
 discs, large homolog 3 (Drosophila)
chr16_-_18937726 0.00 ENST00000389467.3
ENST00000446231.2
 SMG1
 SMG1 phosphatidylinositol 3-kinase-related kinase
chr12_+_130646999 0.00 ENST00000539839.1
ENST00000229030.4
 FZD10
 frizzled family receptor 10
chr19_-_19739007 0.00 ENST00000586703.1
ENST00000591042.1
ENST00000407877.3
 LPAR2
 lysophosphatidic acid receptor 2
chr12_+_53848505 0.00 ENST00000552819.1
ENST00000455667.3
 PCBP2
 poly(rC) binding protein 2
chr13_+_88324870 0.00 ENST00000325089.6
 SLITRK5
 SLIT and NTRK-like family, member 5
chr8_+_26149007 0.00 ENST00000380737.3
ENST00000524169.1
 PPP2R2A
 protein phosphatase 2, regulatory subunit B, alpha
chr3_-_128902729 0.00 ENST00000451728.2
ENST00000446936.2
ENST00000502976.1
ENST00000500450.2
ENST00000441626.2
 CNBP
 CCHC-type zinc finger, nucleic acid binding protein
chr1_-_213189108 0.00 ENST00000535388.1
 ANGEL2
 angel homolog 2 (Drosophila)
chrX_+_133507327 0.00 ENST00000332070.3
ENST00000394292.1
ENST00000370799.1
ENST00000416404.2
 PHF6
 PHD finger protein 6
chr17_-_7120525 0.00 ENST00000447163.1
ENST00000399506.2
ENST00000302955.6
 DLG4
 discs, large homolog 4 (Drosophila)
chr13_-_45915221 0.00 ENST00000309246.5
ENST00000379060.4
ENST00000379055.1
ENST00000527226.1
ENST00000379056.1
 TPT1
 tumor protein, translationally-controlled 1
chr1_-_146644122 0.00 ENST00000254101.3
 PRKAB2
 protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr14_-_64010046 0.00 ENST00000337537.3
 PPP2R5E
 protein phosphatase 2, regulatory subunit B', epsilon isoform

Gene Ontology Analysis

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0010858 calcium-dependent protein kinase regulator activity(GO:0010858)
0.0 0.2 GO:0001849 complement component C1q binding(GO:0001849)
0.0 0.3 GO:0005172 vascular endothelial growth factor receptor binding(GO:0005172)
0.0 0.1 GO:0098639 collagen binding involved in cell-matrix adhesion(GO:0098639)
0.0 0.1 GO:0005534 galactose binding(GO:0005534)
0.0 0.1 GO:0019211 phosphatase activator activity(GO:0019211) co-receptor binding(GO:0039706)
0.0 0.1 GO:0008046 axon guidance receptor activity(GO:0008046)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.3 REACTOME RNA POL III TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase III Transcription Termination

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:1901490 regulation of lymphangiogenesis(GO:1901490)
0.0 0.3 GO:0021740 trigeminal sensory nucleus development(GO:0021730) principal sensory nucleus of trigeminal nerve development(GO:0021740) negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795)
0.0 0.1 GO:0060129 negative regulation of Wnt signaling pathway involved in heart development(GO:0003308) thyroid-stimulating hormone-secreting cell differentiation(GO:0060129)
0.0 0.1 GO:0003409 optic cup structural organization(GO:0003409)
0.0 0.1 GO:0060940 epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.0 0.2 GO:0048050 post-embryonic eye morphogenesis(GO:0048050)
0.0 0.1 GO:0050923 cerebral cortex tangential migration using cell-cell interactions(GO:0021823) postnatal olfactory bulb interneuron migration(GO:0021827) chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836) regulation of negative chemotaxis(GO:0050923)
0.0 0.1 GO:0009956 radial pattern formation(GO:0009956)
0.0 0.0 GO:0032289 central nervous system myelin formation(GO:0032289)
0.0 0.1 GO:0007161 calcium-independent cell-matrix adhesion(GO:0007161) regulation of collagen catabolic process(GO:0010710)
0.0 0.1 GO:0060355 positive regulation of cell adhesion molecule production(GO:0060355)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0044300 cerebellar mossy fiber(GO:0044300)
0.0 0.1 GO:0034680 integrin alpha1-beta1 complex(GO:0034665) integrin alpha3-beta1 complex(GO:0034667) integrin alpha8-beta1 complex(GO:0034678) integrin alpha10-beta1 complex(GO:0034680)
0.0 0.1 GO:0036195 muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)