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ENCODE cell lines, expression (Ernst 2011)
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Results for CCUUGGC
Z-value: 0.12
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miRNA associated with seed CCUUGGC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-212-5p
|
MIMAT0022695 |
Activity profile of CCUUGGC motif
Sorted Z-values of CCUUGGC motif
Network of associatons between targets according to the STRING database.
First level regulatory network of CCUUGGC
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_-_71801980 | 0.07 |
ENST00000329008.5 |
CALN1 |
calneuron 1 |
| chr15_+_41952591 | 0.06 |
ENST00000566718.1 ENST00000219905.7 ENST00000389936.4 ENST00000545763.1 |
MGA |
MGA, MAX dimerization protein |
| chr8_+_56014949 | 0.06 |
ENST00000327381.6 |
XKR4 |
XK, Kell blood group complex subunit-related family, member 4 |
| chr20_+_37434329 | 0.05 |
ENST00000299824.1 ENST00000373331.2 |
PPP1R16B |
protein phosphatase 1, regulatory subunit 16B |
| chr18_+_13218769 | 0.05 |
ENST00000399848.3 ENST00000361205.4 |
LDLRAD4 |
low density lipoprotein receptor class A domain containing 4 |
| chr19_+_926000 | 0.05 |
ENST00000263620.3 |
ARID3A |
AT rich interactive domain 3A (BRIGHT-like) |
| chr8_-_8751068 | 0.04 |
ENST00000276282.6 |
MFHAS1 |
malignant fibrous histiocytoma amplified sequence 1 |
| chr15_-_34628951 | 0.04 |
ENST00000397707.2 ENST00000560611.1 |
SLC12A6 |
solute carrier family 12 (potassium/chloride transporter), member 6 |
| chrY_+_15016725 | 0.04 |
ENST00000336079.3 |
DDX3Y |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
| chr4_+_128554081 | 0.04 |
ENST00000335251.6 ENST00000296461.5 |
INTU |
inturned planar cell polarity protein |
| chr16_-_89007491 | 0.04 |
ENST00000327483.5 ENST00000564416.1 |
CBFA2T3 |
core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
| chr1_+_214161272 | 0.03 |
ENST00000498508.2 ENST00000366958.4 |
PROX1 |
prospero homeobox 1 |
| chr17_-_48785216 | 0.03 |
ENST00000285243.6 |
ANKRD40 |
ankyrin repeat domain 40 |
| chr2_-_27938593 | 0.03 |
ENST00000379677.2 |
AC074091.13 |
Uncharacterized protein |
| chr2_-_208634287 | 0.03 |
ENST00000295417.3 |
FZD5 |
frizzled family receptor 5 |
| chr3_+_38495333 | 0.03 |
ENST00000352511.4 |
ACVR2B |
activin A receptor, type IIB |
| chr3_-_53880401 | 0.03 |
ENST00000315251.6 |
CHDH |
choline dehydrogenase |
| chrX_+_152953505 | 0.03 |
ENST00000253122.5 |
SLC6A8 |
solute carrier family 6 (neurotransmitter transporter), member 8 |
| chr11_+_75526212 | 0.03 |
ENST00000356136.3 |
UVRAG |
UV radiation resistance associated |
| chr1_-_23886285 | 0.03 |
ENST00000374561.5 |
ID3 |
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein |
| chr19_+_42724423 | 0.02 |
ENST00000301215.3 ENST00000597945.1 |
ZNF526 |
zinc finger protein 526 |
| chr1_+_11751748 | 0.02 |
ENST00000294485.5 |
DRAXIN |
dorsal inhibitory axon guidance protein |
| chr2_+_61108650 | 0.02 |
ENST00000295025.8 |
REL |
v-rel avian reticuloendotheliosis viral oncogene homolog |
| chr9_+_104161123 | 0.02 |
ENST00000374861.3 ENST00000339664.2 ENST00000259395.4 |
ZNF189 |
zinc finger protein 189 |
| chr9_-_35665165 | 0.02 |
ENST00000343259.3 ENST00000378387.3 |
ARHGEF39 |
Rho guanine nucleotide exchange factor (GEF) 39 |
| chr3_-_72496035 | 0.02 |
ENST00000477973.2 |
RYBP |
RING1 and YY1 binding protein |
| chr2_-_96874553 | 0.02 |
ENST00000337288.5 ENST00000443962.1 |
STARD7 |
StAR-related lipid transfer (START) domain containing 7 |
| chr8_-_82024290 | 0.02 |
ENST00000220597.4 |
PAG1 |
phosphoprotein associated with glycosphingolipid microdomains 1 |
| chr17_-_8151353 | 0.02 |
ENST00000315684.8 |
CTC1 |
CTS telomere maintenance complex component 1 |
| chr1_+_54519242 | 0.02 |
ENST00000234827.1 |
TCEANC2 |
transcription elongation factor A (SII) N-terminal and central domain containing 2 |
| chr22_+_50247449 | 0.02 |
ENST00000216268.5 |
ZBED4 |
zinc finger, BED-type containing 4 |
| chr8_-_81083731 | 0.02 |
ENST00000379096.5 |
TPD52 |
tumor protein D52 |
| chr10_+_48189612 | 0.02 |
ENST00000453919.1 |
AGAP9 |
ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 |
| chr3_-_138553594 | 0.02 |
ENST00000477593.1 ENST00000483968.1 |
PIK3CB |
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta |
| chr2_-_220094294 | 0.02 |
ENST00000436856.1 ENST00000428226.1 ENST00000409422.1 ENST00000431715.1 ENST00000457841.1 ENST00000439812.1 ENST00000361242.4 ENST00000396761.2 |
ATG9A |
autophagy related 9A |
| chr10_+_72164135 | 0.02 |
ENST00000373218.4 |
EIF4EBP2 |
eukaryotic translation initiation factor 4E binding protein 2 |
| chr11_+_34127142 | 0.02 |
ENST00000257829.3 ENST00000531159.2 |
NAT10 |
N-acetyltransferase 10 (GCN5-related) |
| chr9_-_135996537 | 0.02 |
ENST00000372050.3 ENST00000372047.3 |
RALGDS |
ral guanine nucleotide dissociation stimulator |
| chr17_-_76713100 | 0.02 |
ENST00000585509.1 |
CYTH1 |
cytohesin 1 |
| chr17_-_60142609 | 0.02 |
ENST00000397786.2 |
MED13 |
mediator complex subunit 13 |
| chr9_-_20622478 | 0.01 |
ENST00000355930.6 ENST00000380338.4 |
MLLT3 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
| chr14_-_95786200 | 0.01 |
ENST00000298912.4 |
CLMN |
calmin (calponin-like, transmembrane) |
| chr6_-_99395787 | 0.01 |
ENST00000369244.2 ENST00000229971.1 |
FBXL4 |
F-box and leucine-rich repeat protein 4 |
| chr1_-_89591749 | 0.01 |
ENST00000370466.3 |
GBP2 |
guanylate binding protein 2, interferon-inducible |
| chrX_-_50557014 | 0.01 |
ENST00000376020.2 |
SHROOM4 |
shroom family member 4 |
| chr17_+_28804380 | 0.01 |
ENST00000225724.5 ENST00000451249.2 ENST00000467337.2 ENST00000581721.1 ENST00000414833.2 |
GOSR1 |
golgi SNAP receptor complex member 1 |
| chr7_+_127292234 | 0.01 |
ENST00000354725.3 |
SND1 |
staphylococcal nuclease and tudor domain containing 1 |
| chrX_+_77166172 | 0.01 |
ENST00000343533.5 ENST00000350425.4 ENST00000341514.6 |
ATP7A |
ATPase, Cu++ transporting, alpha polypeptide |
| chr5_+_139781445 | 0.01 |
ENST00000532219.1 ENST00000394722.3 |
ANKHD1-EIF4EBP3 ANKHD1 |
ANKHD1-EIF4EBP3 readthrough ankyrin repeat and KH domain containing 1 |
| chr2_-_40679186 | 0.01 |
ENST00000406785.2 |
SLC8A1 |
solute carrier family 8 (sodium/calcium exchanger), member 1 |
| chr3_-_11762202 | 0.01 |
ENST00000445411.1 ENST00000404339.1 ENST00000273038.3 |
VGLL4 |
vestigial like 4 (Drosophila) |
| chr13_-_79177673 | 0.01 |
ENST00000377208.5 |
POU4F1 |
POU class 4 homeobox 1 |
| chr16_-_15736953 | 0.01 |
ENST00000548025.1 ENST00000551742.1 ENST00000602337.1 ENST00000344181.3 ENST00000396368.3 |
KIAA0430 |
KIAA0430 |
| chr1_+_201979645 | 0.01 |
ENST00000367284.5 ENST00000367283.3 |
ELF3 |
E74-like factor 3 (ets domain transcription factor, epithelial-specific ) |
| chr2_-_85555385 | 0.01 |
ENST00000377386.3 |
TGOLN2 |
trans-golgi network protein 2 |
| chr15_-_35261996 | 0.01 |
ENST00000156471.5 |
AQR |
aquarius intron-binding spliceosomal factor |
| chr2_-_201936302 | 0.01 |
ENST00000453765.1 ENST00000452799.1 ENST00000446678.1 ENST00000418596.3 |
FAM126B |
family with sequence similarity 126, member B |
| chr5_+_139927213 | 0.01 |
ENST00000310331.2 |
EIF4EBP3 |
eukaryotic translation initiation factor 4E binding protein 3 |
| chr19_+_7953384 | 0.01 |
ENST00000306708.6 |
LRRC8E |
leucine rich repeat containing 8 family, member E |
| chr5_-_37839782 | 0.01 |
ENST00000326524.2 ENST00000515058.1 |
GDNF |
glial cell derived neurotrophic factor |
| chr10_+_111967345 | 0.01 |
ENST00000332674.5 ENST00000453116.1 |
MXI1 |
MAX interactor 1, dimerization protein |
| chr1_+_205012293 | 0.01 |
ENST00000331830.4 |
CNTN2 |
contactin 2 (axonal) |
| chr4_+_6784401 | 0.01 |
ENST00000425103.1 ENST00000307659.5 |
KIAA0232 |
KIAA0232 |
| chr1_+_117602925 | 0.01 |
ENST00000369466.4 |
TTF2 |
transcription termination factor, RNA polymerase II |
| chr6_+_57182400 | 0.01 |
ENST00000607273.1 |
PRIM2 |
primase, DNA, polypeptide 2 (58kDa) |
| chr1_+_16330723 | 0.01 |
ENST00000329454.2 |
C1orf64 |
chromosome 1 open reading frame 64 |
| chr8_+_76452097 | 0.01 |
ENST00000396423.2 |
HNF4G |
hepatocyte nuclear factor 4, gamma |
| chr12_-_58240470 | 0.01 |
ENST00000548823.1 ENST00000398073.2 |
CTDSP2 |
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 |
| chr16_-_71610985 | 0.01 |
ENST00000355962.4 |
TAT |
tyrosine aminotransferase |
| chr17_-_45266542 | 0.01 |
ENST00000531206.1 ENST00000527547.1 ENST00000446365.2 ENST00000575483.1 ENST00000066544.3 |
CDC27 |
cell division cycle 27 |
| chr3_+_183873098 | 0.01 |
ENST00000313143.3 |
DVL3 |
dishevelled segment polarity protein 3 |
| chr17_-_62207485 | 0.01 |
ENST00000433197.3 |
ERN1 |
endoplasmic reticulum to nucleus signaling 1 |
| chr15_+_44829255 | 0.01 |
ENST00000261868.5 ENST00000424492.3 |
EIF3J |
eukaryotic translation initiation factor 3, subunit J |
| chr1_+_2985760 | 0.01 |
ENST00000378391.2 ENST00000514189.1 ENST00000270722.5 |
PRDM16 |
PR domain containing 16 |
| chrX_+_41192595 | 0.01 |
ENST00000399959.2 |
DDX3X |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked |
| chr16_+_81348528 | 0.01 |
ENST00000568107.2 |
GAN |
gigaxonin |
| chr11_-_82782861 | 0.01 |
ENST00000524635.1 ENST00000526205.1 ENST00000527633.1 ENST00000533486.1 ENST00000533276.2 |
RAB30 |
RAB30, member RAS oncogene family |
| chr16_-_18937726 | 0.01 |
ENST00000389467.3 ENST00000446231.2 |
SMG1 |
SMG1 phosphatidylinositol 3-kinase-related kinase |
| chr1_+_25757376 | 0.01 |
ENST00000399766.3 ENST00000399763.3 ENST00000374343.4 |
TMEM57 |
transmembrane protein 57 |
| chrX_+_122993827 | 0.01 |
ENST00000371199.3 |
XIAP |
X-linked inhibitor of apoptosis |
| chr3_-_33686743 | 0.00 |
ENST00000333778.6 ENST00000539981.1 |
CLASP2 |
cytoplasmic linker associated protein 2 |
| chr11_+_65819802 | 0.00 |
ENST00000528302.1 ENST00000322535.6 ENST00000524627.1 ENST00000533595.1 ENST00000530322.1 |
SF3B2 |
splicing factor 3b, subunit 2, 145kDa |
| chr16_+_50775948 | 0.00 |
ENST00000569681.1 ENST00000569418.1 ENST00000540145.1 |
CYLD |
cylindromatosis (turban tumor syndrome) |
| chr8_+_128426535 | 0.00 |
ENST00000465342.2 |
POU5F1B |
POU class 5 homeobox 1B |
| chr17_+_8213590 | 0.00 |
ENST00000361926.3 |
ARHGEF15 |
Rho guanine nucleotide exchange factor (GEF) 15 |
| chr6_+_50786414 | 0.00 |
ENST00000344788.3 ENST00000393655.3 ENST00000263046.4 |
TFAP2B |
transcription factor AP-2 beta (activating enhancer binding protein 2 beta) |
| chr7_-_92463210 | 0.00 |
ENST00000265734.4 |
CDK6 |
cyclin-dependent kinase 6 |
| chr12_+_70636765 | 0.00 |
ENST00000552231.1 ENST00000229195.3 ENST00000547780.1 ENST00000418359.3 |
CNOT2 |
CCR4-NOT transcription complex, subunit 2 |
| chr2_+_159313452 | 0.00 |
ENST00000389757.3 ENST00000389759.3 |
PKP4 |
plakophilin 4 |
| chr3_-_114790179 | 0.00 |
ENST00000462705.1 |
ZBTB20 |
zinc finger and BTB domain containing 20 |
| chr9_-_127269661 | 0.00 |
ENST00000373588.4 |
NR5A1 |
nuclear receptor subfamily 5, group A, member 1 |
| chr2_+_168725458 | 0.00 |
ENST00000392690.3 |
B3GALT1 |
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 |
| chr15_+_75118888 | 0.00 |
ENST00000395018.4 |
CPLX3 |
complexin 3 |
| chr11_+_61447845 | 0.00 |
ENST00000257215.5 |
DAGLA |
diacylglycerol lipase, alpha |
| chr20_+_33814457 | 0.00 |
ENST00000246186.6 |
MMP24 |
matrix metallopeptidase 24 (membrane-inserted) |
| chr2_+_219264466 | 0.00 |
ENST00000273062.2 |
CTDSP1 |
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
| chr17_+_47865917 | 0.00 |
ENST00000259021.4 ENST00000454930.2 ENST00000509773.1 ENST00000510819.1 ENST00000424009.2 |
KAT7 |
K(lysine) acetyltransferase 7 |
| chr16_-_46865047 | 0.00 |
ENST00000394806.2 |
C16orf87 |
chromosome 16 open reading frame 87 |
| chr1_+_178995021 | 0.00 |
ENST00000263733.4 |
FAM20B |
family with sequence similarity 20, member B |
| chr6_-_91006461 | 0.00 |
ENST00000257749.4 ENST00000343122.3 ENST00000406998.2 ENST00000453877.1 |
BACH2 |
BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
| chr17_-_73179046 | 0.00 |
ENST00000314523.7 ENST00000420826.2 |
SUMO2 |
small ubiquitin-like modifier 2 |
| chr11_+_120207787 | 0.00 |
ENST00000397843.2 ENST00000356641.3 |
ARHGEF12 |
Rho guanine nucleotide exchange factor (GEF) 12 |
| chr8_+_37594130 | 0.00 |
ENST00000518526.1 ENST00000523887.1 ENST00000276461.5 |
ERLIN2 |
ER lipid raft associated 2 |
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:1902309 | negative regulation of peptidyl-serine dephosphorylation(GO:1902309) |
| 0.0 | 0.0 | GO:0046619 | optic placode formation involved in camera-type eye formation(GO:0046619) |
| 0.0 | 0.0 | GO:0060061 | Spemann organizer formation(GO:0060061) |