ENCODE cell lines, expression (Ernst 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Gene Symbol	Gene ID	Gene Info
EBF3 Links Ensembl NCBI GeneCards UniProt	ENSG00000108001.9	EBF3

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Promoter	Score	Transcript	Gene	Gene Info
chr14_+_101193246	3.61	ENST00000331224.6	DLK1	delta-like 1 homolog (Drosophila)
chr14_+_101193164	3.57	ENST00000341267.4	DLK1	delta-like 1 homolog (Drosophila)
chr11_+_116700614	2.11	ENST00000375345.1	APOC3	apolipoprotein C-III
chr11_+_116700600	2.11	ENST00000227667.3	APOC3	apolipoprotein C-III
chr17_-_7082861	1.84	ENST00000269299.3	ASGR1	asialoglycoprotein receptor 1
chr11_+_22689648	1.50	ENST00000278187.3	GAS2	growth arrest-specific 2
chr17_-_7082668	1.50	ENST00000573083.1 ENST00000574388.1	ASGR1	asialoglycoprotein receptor 1
chr17_-_56494908	1.47	ENST00000577716.1	RNF43	ring finger protein 43
chr17_-_56494882	1.46	ENST00000584437.1	RNF43	ring finger protein 43
chr2_-_238499303	1.45	ENST00000409576.1	RAB17	RAB17, member RAS oncogene family
chr16_+_72088376	1.41	ENST00000570083.1 ENST00000355906.5 ENST00000398131.2 ENST00000569639.1 ENST00000564499.1 ENST00000357763.4 ENST00000562526.1 ENST00000565574.1 ENST00000568417.2 ENST00000356967.5	HP HPR	haptoglobin haptoglobin-related protein
chr17_-_56494713	1.38	ENST00000407977.2	RNF43	ring finger protein 43
chr17_+_41006095	1.37	ENST00000591562.1 ENST00000588033.1	AOC3	amine oxidase, copper containing 3
chrX_+_105937068	1.34	ENST00000324342.3	RNF128	ring finger protein 128, E3 ubiquitin protein ligase
chr7_-_100240328	1.33	ENST00000462107.1	TFR2	transferrin receptor 2
chr1_-_21995794	1.33	ENST00000542643.2 ENST00000374765.4 ENST00000317967.7	RAP1GAP	RAP1 GTPase activating protein
chrX_+_192989	1.25	ENST00000399012.1 ENST00000430923.2	PLCXD1	phosphatidylinositol-specific phospholipase C, X domain containing 1
chr16_-_68269971	1.19	ENST00000565858.1	ESRP2	epithelial splicing regulatory protein 2
chr16_-_30798492	1.18	ENST00000262525.4	ZNF629	zinc finger protein 629
chr1_-_182361327	1.08	ENST00000331872.6 ENST00000311223.5	GLUL	glutamate-ammonia ligase
chr1_-_182360918	1.06	ENST00000339526.4	GLUL	glutamate-ammonia ligase
chr4_+_1795012	1.03	ENST00000481110.2 ENST00000340107.4 ENST00000440486.2 ENST00000412135.2	FGFR3	fibroblast growth factor receptor 3
chr5_-_175964366	1.01	ENST00000274811.4	RNF44	ring finger protein 44
chr8_-_145641864	0.91	ENST00000276833.5	SLC39A4	solute carrier family 39 (zinc transporter), member 4
chr4_+_4861385	0.90	ENST00000382723.4	MSX1	msh homeobox 1
chr8_+_21912328	0.89	ENST00000432128.1 ENST00000443491.2 ENST00000517600.1 ENST00000523782.2	DMTN	dematin actin binding protein
chrX_+_38420623	0.86	ENST00000378482.2	TSPAN7	tetraspanin 7
chr17_-_79881408	0.82	ENST00000392366.3	MAFG	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
chr2_+_236402669	0.81	ENST00000409457.1 ENST00000336665.5 ENST00000304032.8	AGAP1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
chr3_+_193853927	0.81	ENST00000232424.3	HES1	hes family bHLH transcription factor 1
chr1_+_2004901	0.81	ENST00000400921.2	PRKCZ	protein kinase C, zeta
chr2_+_128177458	0.80	ENST00000409048.1 ENST00000422777.3	PROC	protein C (inactivator of coagulation factors Va and VIIIa)
chr14_+_24590560	0.80	ENST00000558325.1	RP11-468E2.6	RP11-468E2.6
chrX_+_46940254	0.75	ENST00000336169.3	RGN	regucalcin
chr18_-_28681950	0.73	ENST00000251081.6	DSC2	desmocollin 2
chr1_+_109792641	0.72	ENST00000271332.3	CELSR2	cadherin, EGF LAG seven-pass G-type receptor 2
chr2_-_238499131	0.71	ENST00000538644.1	RAB17	RAB17, member RAS oncogene family
chr22_+_38201114	0.70	ENST00000340857.2	H1F0	H1 histone family, member 0
chr12_-_54694758	0.69	ENST00000553070.1	NFE2	nuclear factor, erythroid 2
chrX_+_38420783	0.69	ENST00000422612.2 ENST00000286824.6 ENST00000545599.1	TSPAN7	tetraspanin 7
chr2_-_238499725	0.69	ENST00000264601.3	RAB17	RAB17, member RAS oncogene family
chr7_-_71912046	0.69	ENST00000395276.2 ENST00000431984.1	CALN1	calneuron 1
chr10_+_114133773	0.67	ENST00000354655.4	ACSL5	acyl-CoA synthetase long-chain family member 5
chr22_-_30960876	0.67	ENST00000401975.1 ENST00000428682.1 ENST00000423299.1	GAL3ST1	galactose-3-O-sulfotransferase 1
chr1_+_2005425	0.65	ENST00000461106.2	PRKCZ	protein kinase C, zeta
chrX_+_152990302	0.64	ENST00000218104.3	ABCD1	ATP-binding cassette, sub-family D (ALD), member 1
chr2_-_188378368	0.64	ENST00000392365.1 ENST00000435414.1	TFPI	tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
chr12_+_100897130	0.64	ENST00000551379.1 ENST00000188403.7 ENST00000551184.1	NR1H4	nuclear receptor subfamily 1, group H, member 4
chr11_-_117699413	0.64	ENST00000528014.1	FXYD2	FXYD domain containing ion transport regulator 2
chr7_-_158380465	0.62	ENST00000389413.3 ENST00000409483.1	PTPRN2	protein tyrosine phosphatase, receptor type, N polypeptide 2
chr11_-_72432950	0.61	ENST00000426523.1 ENST00000429686.1	ARAP1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7_-_158380371	0.60	ENST00000389418.4 ENST00000389416.4	PTPRN2	protein tyrosine phosphatase, receptor type, N polypeptide 2
chr3_-_149293990	0.60	ENST00000472417.1	WWTR1	WW domain containing transcription regulator 1
chr11_-_117698787	0.60	ENST00000260287.2	FXYD2	FXYD domain containing ion transport regulator 2
chr7_-_148823387	0.60	ENST00000483014.1 ENST00000378061.2	ZNF425	zinc finger protein 425
chr3_+_52813932	0.59	ENST00000537050.1	ITIH1	inter-alpha-trypsin inhibitor heavy chain 1
chr12_-_54694807	0.59	ENST00000435572.2	NFE2	nuclear factor, erythroid 2
chr11_-_117698765	0.59	ENST00000532119.1	FXYD2	FXYD domain containing ion transport regulator 2
chrX_+_69509927	0.59	ENST00000374403.3	KIF4A	kinesin family member 4A
chr2_-_238499337	0.58	ENST00000411462.1 ENST00000409822.1	RAB17	RAB17, member RAS oncogene family
chr11_-_65381643	0.56	ENST00000309100.3 ENST00000529839.1 ENST00000526293.1	MAP3K11	mitogen-activated protein kinase kinase kinase 11
chr1_+_46049706	0.56	ENST00000527470.1 ENST00000525515.1 ENST00000537798.1 ENST00000402363.3 ENST00000528238.1 ENST00000350030.3 ENST00000470768.1 ENST00000372052.4 ENST00000351223.3	NASP	nuclear autoantigenic sperm protein (histone-binding)
chr11_+_1860832	0.54	ENST00000252898.7	TNNI2	troponin I type 2 (skeletal, fast)
chr15_+_66994561	0.54	ENST00000288840.5	SMAD6	SMAD family member 6
chr2_-_64371546	0.54	ENST00000358912.4	PELI1	pellino E3 ubiquitin protein ligase 1
chr1_+_174769006	0.53	ENST00000489615.1	RABGAP1L	RAB GTPase activating protein 1-like
chr6_+_42984723	0.52	ENST00000332245.8	KLHDC3	kelch domain containing 3
chr17_-_34890709	0.51	ENST00000544606.1	MYO19	myosin XIX
chrX_+_48644962	0.51	ENST00000376670.3 ENST00000376665.3	GATA1	GATA binding protein 1 (globin transcription factor 1)
chr1_+_236687881	0.51	ENST00000526634.1	LGALS8	lectin, galactoside-binding, soluble, 8
chr10_+_114710516	0.50	ENST00000542695.1 ENST00000346198.4	TCF7L2	transcription factor 7-like 2 (T-cell specific, HMG-box)
chrX_-_152989798	0.49	ENST00000441714.1 ENST00000442093.1 ENST00000429550.1 ENST00000345046.6	BCAP31	B-cell receptor-associated protein 31
chr1_+_28696111	0.49	ENST00000373839.3	PHACTR4	phosphatase and actin regulator 4
chr2_-_27632390	0.49	ENST00000350803.4 ENST00000344034.4	PPM1G	protein phosphatase, Mg2+/Mn2+ dependent, 1G
chr2_-_174830430	0.48	ENST00000310015.6 ENST00000455789.2	SP3	Sp3 transcription factor
chr22_+_39898325	0.47	ENST00000325301.2 ENST00000404569.1	MIEF1	mitochondrial elongation factor 1
chr2_-_128785688	0.47	ENST00000259234.6	SAP130	Sin3A-associated protein, 130kDa
chr12_-_71182695	0.47	ENST00000342084.4	PTPRR	protein tyrosine phosphatase, receptor type, R
chr6_+_43737939	0.47	ENST00000372067.3	VEGFA	vascular endothelial growth factor A
chr1_-_117210290	0.46	ENST00000369483.1 ENST00000369486.3	IGSF3	immunoglobulin superfamily, member 3
chr17_-_42580738	0.46	ENST00000585614.1 ENST00000591680.1 ENST00000434000.1 ENST00000588554.1 ENST00000592154.1	GPATCH8	G patch domain containing 8
chr7_-_100881109	0.46	ENST00000308344.5	CLDN15	claudin 15
chr7_-_98467629	0.46	ENST00000339375.4	TMEM130	transmembrane protein 130
chr1_+_26869597	0.46	ENST00000530003.1	RPS6KA1	ribosomal protein S6 kinase, 90kDa, polypeptide 1
chr11_+_1860682	0.46	ENST00000381906.1	TNNI2	troponin I type 2 (skeletal, fast)
chr17_-_5026397	0.45	ENST00000250076.3	ZNF232	zinc finger protein 232
chr1_+_14925173	0.45	ENST00000376030.2 ENST00000503743.1 ENST00000422387.2	KAZN	kazrin, periplakin interacting protein
chr6_+_43738444	0.44	ENST00000324450.6 ENST00000417285.2 ENST00000413642.3 ENST00000372055.4 ENST00000482630.2 ENST00000425836.2 ENST00000372064.4 ENST00000372077.4 ENST00000519767.1	VEGFA	vascular endothelial growth factor A
chr7_-_98467543	0.44	ENST00000345589.4	TMEM130	transmembrane protein 130
chr6_+_7107999	0.44	ENST00000491191.1 ENST00000379938.2 ENST00000471433.1	RREB1	ras responsive element binding protein 1
chr3_-_128212016	0.44	ENST00000498200.1 ENST00000341105.2	GATA2	GATA binding protein 2
chr4_+_37892682	0.43	ENST00000508802.1 ENST00000261439.4 ENST00000402522.1	TBC1D1	TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
chr1_+_110453109	0.43	ENST00000525659.1	CSF1	colony stimulating factor 1 (macrophage)
chrX_-_33229636	0.43	ENST00000357033.4	DMD	dystrophin
chr1_+_150229554	0.42	ENST00000369111.4	CA14	carbonic anhydrase XIV
chr16_+_23569021	0.42	ENST00000567212.1 ENST00000567264.1	UBFD1	ubiquitin family domain containing 1
chr17_-_80023401	0.41	ENST00000354321.7 ENST00000306796.5	DUS1L	dihydrouridine synthase 1-like (S. cerevisiae)
chr10_+_114709999	0.41	ENST00000355995.4 ENST00000545257.1 ENST00000543371.1 ENST00000536810.1 ENST00000355717.4 ENST00000538897.1 ENST00000534894.1	TCF7L2	transcription factor 7-like 2 (T-cell specific, HMG-box)
chr3_-_185826855	0.40	ENST00000306376.5	ETV5	ets variant 5
chr5_+_154393260	0.40	ENST00000435029.4	KIF4B	kinesin family member 4B
chrX_-_74376108	0.40	ENST00000339447.4 ENST00000373394.3 ENST00000529949.1 ENST00000534524.1 ENST00000253577.3	ABCB7	ATP-binding cassette, sub-family B (MDR/TAP), member 7
chr16_+_28505955	0.40	ENST00000564831.1 ENST00000328423.5 ENST00000431282.1	APOBR	apolipoprotein B receptor
chr16_+_72142195	0.39	ENST00000563819.1 ENST00000567142.2	DHX38	DEAH (Asp-Glu-Ala-His) box polypeptide 38
chr1_+_11751748	0.38	ENST00000294485.5	DRAXIN	dorsal inhibitory axon guidance protein
chr11_-_72433346	0.38	ENST00000334211.8	ARAP1	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr14_+_23790655	0.38	ENST00000397276.2	PABPN1	poly(A) binding protein, nuclear 1
chr14_+_105953246	0.37	ENST00000392531.3	CRIP1	cysteine-rich protein 1 (intestinal)
chr19_+_33865218	0.37	ENST00000585933.2	CEBPG	CCAAT/enhancer binding protein (C/EBP), gamma
chr17_+_73452545	0.37	ENST00000314256.7	KIAA0195	KIAA0195
chr7_-_1015198	0.37	ENST00000344111.3	COX19	cytochrome c oxidase assembly homolog 19 (S. cerevisiae)
chr19_-_55881741	0.36	ENST00000264563.2 ENST00000590625.1 ENST00000585513.1	IL11	interleukin 11
chr15_+_90544532	0.36	ENST00000268154.4	ZNF710	zinc finger protein 710
chr20_-_30795511	0.36	ENST00000246229.4	PLAGL2	pleiomorphic adenoma gene-like 2
chr14_+_105953204	0.35	ENST00000409393.2	CRIP1	cysteine-rich protein 1 (intestinal)
chr9_+_134103496	0.35	ENST00000498010.1 ENST00000476004.1 ENST00000528406.1	NUP214	nucleoporin 214kDa
chr16_+_30662184	0.35	ENST00000300835.4	PRR14	proline rich 14
chr18_+_10454594	0.35	ENST00000355285.5	APCDD1	adenomatosis polyposis coli down-regulated 1
chr2_+_169312350	0.34	ENST00000305747.6	CERS6	ceramide synthase 6
chr8_-_80680078	0.34	ENST00000337919.5 ENST00000354724.3	HEY1	hes-related family bHLH transcription factor with YRPW motif 1
chr17_+_43972010	0.34	ENST00000334239.8 ENST00000446361.3	MAPT	microtubule-associated protein tau
chr19_-_59010565	0.34	ENST00000594786.1	SLC27A5	solute carrier family 27 (fatty acid transporter), member 5
chr7_+_29874341	0.34	ENST00000409290.1 ENST00000242140.5	WIPF3	WAS/WASL interacting protein family, member 3
chr10_+_88428370	0.33	ENST00000372066.3 ENST00000263066.6 ENST00000372056.4 ENST00000310944.6 ENST00000361373.4 ENST00000542786.1	LDB3	LIM domain binding 3
chr13_+_113622810	0.33	ENST00000397030.1	MCF2L	MCF.2 cell line derived transforming sequence-like
chr13_+_113622757	0.33	ENST00000375604.2	MCF2L	MCF.2 cell line derived transforming sequence-like
chr14_+_75536335	0.33	ENST00000554763.1 ENST00000439583.2 ENST00000526130.1 ENST00000525046.1	ZC2HC1C	zinc finger, C2HC-type containing 1C
chr1_-_151431909	0.33	ENST00000361398.3 ENST00000271715.2	POGZ	pogo transposable element with ZNF domain
chr12_+_7282795	0.33	ENST00000266546.6	CLSTN3	calsyntenin 3
chr12_+_1100370	0.32	ENST00000543086.3 ENST00000546231.2 ENST00000397203.2	ERC1	ELKS/RAB6-interacting/CAST family member 1
chr14_-_23540826	0.32	ENST00000357481.2	ACIN1	apoptotic chromatin condensation inducer 1
chr1_+_3388181	0.32	ENST00000418137.1 ENST00000413250.2	ARHGEF16	Rho guanine nucleotide exchange factor (GEF) 16
chr10_-_73848764	0.32	ENST00000317376.4 ENST00000412663.1	SPOCK2	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
chr19_-_7293942	0.31	ENST00000341500.5 ENST00000302850.5	INSR	insulin receptor
chr14_+_105952648	0.31	ENST00000330233.7	CRIP1	cysteine-rich protein 1 (intestinal)
chr1_-_151431647	0.30	ENST00000368863.2 ENST00000409503.1 ENST00000491586.1 ENST00000533351.1 ENST00000540984.1	POGZ	pogo transposable element with ZNF domain
chr9_+_136325089	0.30	ENST00000291722.7 ENST00000316948.4 ENST00000540581.1	CACFD1	calcium channel flower domain containing 1
chr8_+_28748099	0.30	ENST00000519047.1	HMBOX1	homeobox containing 1
chr7_+_107110488	0.30	ENST00000304402.4	GPR22	G protein-coupled receptor 22
chr2_+_27070964	0.29	ENST00000288699.6	DPYSL5	dihydropyrimidinase-like 5
chr16_-_68482440	0.29	ENST00000219334.5	SMPD3	sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
chr9_+_135854091	0.29	ENST00000450530.1 ENST00000534944.1	GFI1B	growth factor independent 1B transcription repressor
chr14_+_75536280	0.29	ENST00000238686.8	ZC2HC1C	zinc finger, C2HC-type containing 1C
chr2_-_219134822	0.29	ENST00000444053.1 ENST00000248450.4	AAMP	angio-associated, migratory cell protein
chr10_+_102106829	0.28	ENST00000370355.2	SCD	stearoyl-CoA desaturase (delta-9-desaturase)
chr16_+_30662360	0.28	ENST00000542965.2	PRR14	proline rich 14
chr11_+_64879317	0.28	ENST00000526809.1 ENST00000279263.7 ENST00000524986.1 ENST00000534371.1 ENST00000540748.1 ENST00000525385.1 ENST00000345348.5 ENST00000531321.1 ENST00000529414.1 ENST00000526085.1 ENST00000530750.1	TM7SF2	transmembrane 7 superfamily member 2
chrX_-_48827976	0.28	ENST00000218176.3	KCND1	potassium voltage-gated channel, Shal-related subfamily, member 1
chr3_+_5020801	0.28	ENST00000256495.3	BHLHE40	basic helix-loop-helix family, member e40
chr17_-_37382105	0.28	ENST00000333461.5	STAC2	SH3 and cysteine rich domain 2
chr10_+_17851362	0.28	ENST00000331429.2 ENST00000457317.1	MRC1L1	cDNA FLJ56855, highly similar to Macrophage mannose receptor 1
chr20_-_35492048	0.27	ENST00000237536.4	SOGA1	suppressor of glucose, autophagy associated 1
chr11_+_63655987	0.27	ENST00000509502.2 ENST00000512060.1	MARK2	MAP/microtubule affinity-regulating kinase 2
chr5_-_58295712	0.27	ENST00000317118.8	PDE4D	phosphodiesterase 4D, cAMP-specific
chr1_-_1051455	0.27	ENST00000379339.1 ENST00000480643.1 ENST00000434641.1 ENST00000421241.2	C1orf159	chromosome 1 open reading frame 159
chr6_+_161412759	0.27	ENST00000366919.2 ENST00000392142.4 ENST00000366920.2 ENST00000348824.7	MAP3K4	mitogen-activated protein kinase kinase kinase 4
chr10_+_104678032	0.27	ENST00000369878.4 ENST00000369875.3	CNNM2	cyclin M2
chr8_-_19459993	0.26	ENST00000454498.2 ENST00000520003.1	CSGALNACT1	chondroitin sulfate N-acetylgalactosaminyltransferase 1
chr8_+_28747884	0.26	ENST00000287701.10 ENST00000444075.1 ENST00000403668.2 ENST00000519662.1 ENST00000558662.1 ENST00000523613.1 ENST00000560599.1 ENST00000397358.3	HMBOX1	homeobox containing 1
chr19_+_984313	0.26	ENST00000251289.5 ENST00000587001.2 ENST00000607440.1	WDR18	WD repeat domain 18
chr17_-_34890732	0.26	ENST00000268852.9	MYO19	myosin XIX
chr17_+_38465441	0.26	ENST00000577646.1 ENST00000254066.5	RARA	retinoic acid receptor, alpha
chr12_+_112279782	0.26	ENST00000550735.2	MAPKAPK5	mitogen-activated protein kinase-activated protein kinase 5
chr22_-_43411106	0.25	ENST00000453643.1 ENST00000263246.3 ENST00000337959.4	PACSIN2	protein kinase C and casein kinase substrate in neurons 2
chr3_-_185826286	0.25	ENST00000537818.1 ENST00000422039.1 ENST00000434744.1	ETV5	ets variant 5
chr9_+_112403088	0.25	ENST00000448454.2	PALM2	paralemmin 2
chr16_-_30381580	0.25	ENST00000409939.3	TBC1D10B	TBC1 domain family, member 10B
chr8_+_145582231	0.24	ENST00000526338.1 ENST00000402965.1 ENST00000534725.1 ENST00000532887.1 ENST00000329994.2	SLC52A2	solute carrier family 52 (riboflavin transporter), member 2
chr17_+_43971643	0.24	ENST00000344290.5 ENST00000262410.5 ENST00000351559.5 ENST00000340799.5 ENST00000535772.1 ENST00000347967.5	MAPT	microtubule-associated protein tau
chr10_+_104678102	0.24	ENST00000433628.2	CNNM2	cyclin M2
chr17_-_34890759	0.23	ENST00000431794.3	MYO19	myosin XIX
chr8_+_145582217	0.23	ENST00000530047.1 ENST00000527078.1	SLC52A2	solute carrier family 52 (riboflavin transporter), member 2
chr17_-_42296855	0.23	ENST00000436088.1	UBTF	upstream binding transcription factor, RNA polymerase I
chr14_-_22005018	0.23	ENST00000546363.1	SALL2	spalt-like transcription factor 2
chr1_+_110453514	0.22	ENST00000369802.3 ENST00000420111.2	CSF1	colony stimulating factor 1 (macrophage)
chr14_-_24553834	0.22	ENST00000397002.2	NRL	neural retina leucine zipper
chr16_-_28506840	0.22	ENST00000569430.1	CLN3	ceroid-lipofuscinosis, neuronal 3
chr10_-_102090243	0.22	ENST00000338519.3 ENST00000353274.3 ENST00000318222.3	PKD2L1	polycystic kidney disease 2-like 1
chr4_+_39408470	0.22	ENST00000257408.4	KLB	klotho beta
chr4_-_140223614	0.22	ENST00000394223.1	NDUFC1	NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
chr19_+_37407212	0.21	ENST00000427117.1 ENST00000587130.1 ENST00000333987.7 ENST00000415168.1 ENST00000444991.1	ZNF568	zinc finger protein 568
chr7_-_137686791	0.21	ENST00000452463.1 ENST00000330387.6 ENST00000456390.1	CREB3L2	cAMP responsive element binding protein 3-like 2
chr16_-_29478016	0.21	ENST00000549858.1 ENST00000551411.1	RP11-345J4.3	Uncharacterized protein
chr1_-_41950342	0.21	ENST00000372587.4	EDN2	endothelin 2
chrX_+_9217932	0.21	ENST00000432442.1	GS1-519E5.1	GS1-519E5.1
chr11_-_46142948	0.21	ENST00000257821.4	PHF21A	PHD finger protein 21A
chr17_+_73472575	0.21	ENST00000375248.5	KIAA0195	KIAA0195
chr8_+_136470270	0.21	ENST00000524199.1	KHDRBS3	KH domain containing, RNA binding, signal transduction associated 3
chr1_+_110198714	0.21	ENST00000336075.5 ENST00000326729.5	GSTM4	glutathione S-transferase mu 4
chr21_-_45682099	0.20	ENST00000270172.3 ENST00000418993.1	DNMT3L	DNA (cytosine-5-)-methyltransferase 3-like
chr19_+_49403562	0.20	ENST00000407032.1 ENST00000452087.1 ENST00000411700.1	NUCB1	nucleobindin 1
chr10_+_111985713	0.20	ENST00000239007.7	MXI1	MAX interactor 1, dimerization protein
chr14_+_23791159	0.20	ENST00000557702.1	PABPN1	poly(A) binding protein, nuclear 1
chr14_-_75536182	0.20	ENST00000555463.1	ACYP1	acylphosphatase 1, erythrocyte (common) type
chr7_+_65338230	0.19	ENST00000360768.3	VKORC1L1	vitamin K epoxide reductase complex, subunit 1-like 1
chr8_+_145582633	0.19	ENST00000540505.1	SLC52A2	solute carrier family 52 (riboflavin transporter), member 2
chr19_-_40331345	0.19	ENST00000597224.1	FBL	fibrillarin
chr6_+_144904334	0.19	ENST00000367526.4	UTRN	utrophin
chr7_-_44180673	0.19	ENST00000457314.1 ENST00000447951.1 ENST00000431007.1	MYL7	myosin, light chain 7, regulatory
chr16_+_69958887	0.18	ENST00000568684.1	WWP2	WW domain containing E3 ubiquitin protein ligase 2
chr17_-_74023474	0.18	ENST00000301607.3	EVPL	envoplakin

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	4.2	GO:0034363	intermediate-density lipoprotein particle(GO:0034363)
0.4	1.4	GO:0031838	haptoglobin-hemoglobin complex(GO:0031838)
0.2	1.5	GO:0045179	apical cortex(GO:0045179)
0.2	0.9	GO:0070369	beta-catenin-TCF7L2 complex(GO:0070369)
0.1	0.9	GO:1990682	CSF1-CSF1R complex(GO:1990682)
0.1	0.3	GO:1990876	cytoplasmic side of nuclear pore(GO:1990876)
0.1	0.6	GO:0045298	tubulin complex(GO:0045298)
0.1	2.1	GO:0097386	glial cell projection(GO:0097386)
0.1	1.3	GO:1990712	HFE-transferrin receptor complex(GO:1990712)
0.1	1.8	GO:0005890	sodium:potassium-exchanging ATPase complex(GO:0005890)
0.1	0.5	GO:0005784	Sec61 translocon complex(GO:0005784) translocon complex(GO:0071256)
0.1	0.2	GO:0098592	cytoplasmic side of apical plasma membrane(GO:0098592)
0.1	0.2	GO:0090498	extrinsic component of Golgi membrane(GO:0090498)
0.1	0.2	GO:0031428	box C/D snoRNP complex(GO:0031428)
0.1	0.3	GO:0005899	insulin receptor complex(GO:0005899)
0.1	4.6	GO:0055038	recycling endosome membrane(GO:0055038)
0.1	0.9	GO:0031095	platelet dense tubular network membrane(GO:0031095)
0.1	0.2	GO:0000818	nuclear MIS12/MIND complex(GO:0000818) condensed chromosome inner kinetochore(GO:0000939)
0.1	0.2	GO:0005608	laminin-3 complex(GO:0005608)
0.1	0.2	GO:0005726	perichromatin fibrils(GO:0005726)
0.0	0.7	GO:0042405	nuclear inclusion body(GO:0042405)
0.0	0.4	GO:0016013	syntrophin complex(GO:0016013)
0.0	0.3	GO:0000137	Golgi cis cisterna(GO:0000137)
0.0	1.4	GO:0030057	desmosome(GO:0030057)
0.0	1.0	GO:0005861	troponin complex(GO:0005861)
0.0	0.3	GO:0061574	ASAP complex(GO:0061574)
0.0	1.3	GO:0005719	nuclear euchromatin(GO:0005719)
0.0	0.1	GO:0072536	interleukin-23 receptor complex(GO:0072536)
0.0	0.3	GO:0097427	microtubule bundle(GO:0097427)
0.0	0.3	GO:0008385	IkappaB kinase complex(GO:0008385)
0.0	0.4	GO:0042627	chylomicron(GO:0042627)
0.0	0.2	GO:0098554	cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0	0.1	GO:0071565	nBAF complex(GO:0071565)
0.0	1.2	GO:0045171	intercellular bridge(GO:0045171)
0.0	0.6	GO:0070822	Sin3-type complex(GO:0070822)
0.0	0.1	GO:0035370	UBC13-UEV1A complex(GO:0035370)
0.0	0.1	GO:0097513	myosin II filament(GO:0097513)
0.0	0.2	GO:0070938	contractile ring(GO:0070938)
0.0	0.5	GO:0005779	integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0	0.1	GO:0033588	Elongator holoenzyme complex(GO:0033588)
0.0	0.6	GO:0005697	telomerase holoenzyme complex(GO:0005697)
0.0	1.5	GO:0043195	terminal bouton(GO:0043195)
0.0	0.2	GO:0017146	NMDA selective glutamate receptor complex(GO:0017146)
0.0	0.1	GO:1905202	3-methylcrotonyl-CoA carboxylase complex, mitochondrial(GO:0002169) methylcrotonoyl-CoA carboxylase complex(GO:1905202)
0.0	1.1	GO:0032580	Golgi cisterna membrane(GO:0032580)
0.0	1.0	GO:0017053	transcriptional repressor complex(GO:0017053)
0.0	0.1	GO:0042555	MCM complex(GO:0042555)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	4.2	GO:0070653	high-density lipoprotein particle receptor binding(GO:0070653)
0.5	2.1	GO:0004356	glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.5	1.4	GO:0052596	tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.4	3.3	GO:0004873	asialoglycoprotein receptor activity(GO:0004873)
0.3	1.3	GO:0004998	transferrin receptor activity(GO:0004998)
0.2	1.4	GO:0030492	hemoglobin binding(GO:0030492)
0.2	0.6	GO:1902122	chenodeoxycholic acid binding(GO:1902122)
0.2	0.7	GO:0032217	riboflavin transporter activity(GO:0032217)
0.2	0.9	GO:0043183	vascular endothelial growth factor receptor 1 binding(GO:0043183)
0.1	0.9	GO:0005157	macrophage colony-stimulating factor receptor binding(GO:0005157)
0.1	0.6	GO:0099609	microtubule lateral binding(GO:0099609)
0.1	0.6	GO:0004706	JUN kinase kinase kinase activity(GO:0004706)
0.1	4.4	GO:0005109	frizzled binding(GO:0005109)
0.1	1.8	GO:0005391	sodium:potassium-exchanging ATPase activity(GO:0005391)
0.1	1.0	GO:0060002	plus-end directed microfilament motor activity(GO:0060002)
0.1	0.5	GO:0070697	activin receptor binding(GO:0070697)
0.1	1.0	GO:0005007	fibroblast growth factor-activated receptor activity(GO:0005007)
0.1	1.7	GO:0003680	AT DNA binding(GO:0003680)
0.1	0.7	GO:0001733	galactosylceramide sulfotransferase activity(GO:0001733) galactose 3-O-sulfotransferase activity(GO:0050694)
0.1	0.2	GO:0017166	vinculin binding(GO:0017166)
0.1	0.3	GO:0004768	stearoyl-CoA 9-desaturase activity(GO:0004768) acyl-CoA desaturase activity(GO:0016215)
0.1	0.3	GO:0050613	delta14-sterol reductase activity(GO:0050613)
0.1	2.0	GO:0043560	insulin receptor substrate binding(GO:0043560)
0.1	0.6	GO:0005324	long-chain fatty acid transporter activity(GO:0005324)
0.1	0.3	GO:0008955	peptidoglycan glycosyltransferase activity(GO:0008955)
0.1	0.3	GO:0035939	microsatellite binding(GO:0035939)
0.1	1.2	GO:0031014	troponin T binding(GO:0031014)
0.1	0.7	GO:0086083	cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083)
0.1	0.5	GO:0072542	protein phosphatase activator activity(GO:0072542)
0.1	0.4	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.1	1.7	GO:0005001	transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198)
0.1	0.3	GO:0050291	sphingosine N-acyltransferase activity(GO:0050291)
0.1	0.4	GO:0030229	very-low-density lipoprotein particle receptor activity(GO:0030229)
0.1	0.6	GO:0003720	telomerase activity(GO:0003720) RNA-directed DNA polymerase activity(GO:0003964)
0.1	1.0	GO:0045295	gamma-catenin binding(GO:0045295)
0.1	0.2	GO:0008422	beta-glucosidase activity(GO:0008422)
0.1	1.0	GO:0005385	zinc ion transmembrane transporter activity(GO:0005385)
0.1	0.2	GO:0098770	FBXO family protein binding(GO:0098770)
0.1	0.2	GO:0043559	insulin binding(GO:0043559)
0.0	0.2	GO:0016900	oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor(GO:0016900) vitamin-K-epoxide reductase (warfarin-sensitive) activity(GO:0047057)
0.0	3.6	GO:0019003	GDP binding(GO:0019003)
0.0	0.1	GO:0008475	procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823)
0.0	0.3	GO:0044323	retinoic acid-responsive element binding(GO:0044323)
0.0	0.2	GO:0031708	endothelin B receptor binding(GO:0031708)
0.0	0.3	GO:0015245	fatty acid transporter activity(GO:0015245)
0.0	0.7	GO:0102391	decanoate--CoA ligase activity(GO:0102391)
0.0	0.3	GO:0001165	RNA polymerase I upstream control element sequence-specific DNA binding(GO:0001165)
0.0	0.3	GO:0005250	A-type (transient outward) potassium channel activity(GO:0005250)
0.0	0.4	GO:0015232	heme transporter activity(GO:0015232)
0.0	0.9	GO:0070742	C2H2 zinc finger domain binding(GO:0070742)
0.0	0.1	GO:0004878	complement component C5a receptor activity(GO:0004878)
0.0	0.1	GO:0004886	9-cis retinoic acid receptor activity(GO:0004886)
0.0	0.5	GO:0015095	magnesium ion transmembrane transporter activity(GO:0015095)
0.0	0.5	GO:0034450	ubiquitin-ubiquitin ligase activity(GO:0034450)
0.0	0.1	GO:0004694	eukaryotic translation initiation factor 2alpha kinase activity(GO:0004694)
0.0	0.2	GO:0003998	acylphosphatase activity(GO:0003998)
0.0	1.0	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0	0.7	GO:0051371	muscle alpha-actinin binding(GO:0051371)
0.0	0.2	GO:0016300	tRNA (uracil) methyltransferase activity(GO:0016300)
0.0	0.3	GO:0005049	nuclear export signal receptor activity(GO:0005049)
0.0	0.3	GO:0043426	MRF binding(GO:0043426)
0.0	0.2	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0	0.5	GO:0043522	leucine zipper domain binding(GO:0043522)
0.0	1.3	GO:0050699	WW domain binding(GO:0050699)
0.0	0.1	GO:0042020	interleukin-23 binding(GO:0042019) interleukin-23 receptor activity(GO:0042020)
0.0	0.3	GO:0004767	sphingomyelin phosphodiesterase activity(GO:0004767)
0.0	0.1	GO:0010484	H3 histone acetyltransferase activity(GO:0010484)
0.0	0.5	GO:0031702	type 1 angiotensin receptor binding(GO:0031702)
0.0	0.2	GO:0016015	morphogen activity(GO:0016015) laminin-1 binding(GO:0043237)
0.0	0.1	GO:0034481	chondroitin sulfotransferase activity(GO:0034481)
0.0	0.4	GO:0004089	carbonate dehydratase activity(GO:0004089)
0.0	0.9	GO:0030507	spectrin binding(GO:0030507)
0.0	0.1	GO:0008526	phosphatidylinositol transporter activity(GO:0008526)
0.0	0.4	GO:0050998	nitric-oxide synthase binding(GO:0050998)
0.0	0.1	GO:0060961	phospholipase D inhibitor activity(GO:0060961)
0.0	0.1	GO:0016309	1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309)
0.0	0.1	GO:0097199	cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097199)
0.0	0.1	GO:0051139	metal ion:proton antiporter activity(GO:0051139)
0.0	0.1	GO:0016176	superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0	0.1	GO:0008480	sarcosine dehydrogenase activity(GO:0008480) oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor(GO:0046997)
0.0	0.4	GO:0008301	DNA binding, bending(GO:0008301)
0.0	0.1	GO:0005332	gamma-aminobutyric acid:sodium symporter activity(GO:0005332) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.0	0.5	GO:0042288	MHC class I protein binding(GO:0042288)
0.0	0.2	GO:0001094	TFIID-class transcription factor binding(GO:0001094)
0.0	0.3	GO:0031698	beta-2 adrenergic receptor binding(GO:0031698)
0.0	0.1	GO:0004305	ethanolamine kinase activity(GO:0004305)
0.0	0.2	GO:0019215	intermediate filament binding(GO:0019215)
0.0	0.3	GO:0009931	calcium-dependent protein serine/threonine kinase activity(GO:0009931)
0.0	0.1	GO:0044020	histone methyltransferase activity (H4-R3 specific)(GO:0044020)
0.0	0.3	GO:0070300	phosphatidic acid binding(GO:0070300)
0.0	0.1	GO:0004485	methylcrotonoyl-CoA carboxylase activity(GO:0004485)
0.0	0.5	GO:0043027	cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027)
0.0	0.2	GO:0042043	neurexin family protein binding(GO:0042043)
0.0	0.1	GO:0001591	dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.0	0.2	GO:0019864	IgG binding(GO:0019864)
0.0	0.3	GO:0008191	metalloendopeptidase inhibitor activity(GO:0008191)
0.0	0.1	GO:0003945	N-acetyllactosamine synthase activity(GO:0003945)
0.0	0.3	GO:0050321	tau-protein kinase activity(GO:0050321)
0.0	0.7	GO:0070063	RNA polymerase binding(GO:0070063)
0.0	0.1	GO:0008454	alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.0	0.0	GO:0070644	vitamin D response element binding(GO:0070644)
0.0	0.1	GO:0030898	actin-dependent ATPase activity(GO:0030898)
0.0	2.6	GO:0061630	ubiquitin protein ligase activity(GO:0061630)
0.0	0.2	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.0	0.2	GO:0043295	glutathione binding(GO:0043295)
0.0	0.2	GO:0008331	high voltage-gated calcium channel activity(GO:0008331)
0.0	0.6	GO:0002039	p53 binding(GO:0002039)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	6.7	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.0	0.9	PID VEGF VEGFR PATHWAY	VEGF and VEGFR signaling network
0.0	0.6	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.0	4.8	PID P73PATHWAY	p73 transcription factor network
0.0	1.8	PID IL1 PATHWAY	IL1-mediated signaling events
0.0	1.0	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0	1.0	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor
0.0	1.4	PID RHOA REG PATHWAY	Regulation of RhoA activity
0.0	1.3	PID NFAT TFPATHWAY	Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0	0.6	PID REELIN PATHWAY	Reelin signaling pathway
0.0	1.4	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.0	0.8	PID HES HEY PATHWAY	Notch-mediated HES/HEY network
0.0	0.8	PID INTEGRIN2 PATHWAY	Beta2 integrin cell surface interactions
0.0	1.0	PID BMP PATHWAY	BMP receptor signaling
0.0	0.7	PID IL12 STAT4 PATHWAY	IL12 signaling mediated by STAT4
0.0	0.8	PID SYNDECAN 4 PATHWAY	Syndecan-4-mediated signaling events
0.0	0.3	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.0	0.1	PID S1P S1P4 PATHWAY	S1P4 pathway
0.0	0.5	PID MAPK TRK PATHWAY	Trk receptor signaling mediated by the MAPK pathway
0.0	0.2	PID LYSOPHOSPHOLIPID PATHWAY	LPA receptor mediated events
0.0	0.3	ST JNK MAPK PATHWAY	JNK MAPK Pathway
0.0	0.2	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	7.0	REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS	Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus
0.2	4.2	REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT	Genes involved in Chylomicron-mediated lipid transport
0.1	2.1	REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION	Genes involved in Amino acid synthesis and interconversion (transamination)
0.1	1.5	REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION	Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
0.1	1.0	REACTOME ZINC TRANSPORTERS	Genes involved in Zinc transporters
0.1	2.2	REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS	Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.1	0.1	REACTOME SIGNALING BY NOTCH4	Genes involved in Signaling by NOTCH4
0.1	0.8	REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS	Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0	0.6	REACTOME SIGNALING BY FGFR3 MUTANTS	Genes involved in Signaling by FGFR3 mutants
0.0	0.9	REACTOME VEGF LIGAND RECEPTOR INTERACTIONS	Genes involved in VEGF ligand-receptor interactions
0.0	0.5	REACTOME IRAK1 RECRUITS IKK COMPLEX	Genes involved in IRAK1 recruits IKK complex
0.0	0.7	REACTOME PROCESSING OF INTRONLESS PRE MRNAS	Genes involved in Processing of Intronless Pre-mRNAs
0.0	0.7	REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS	Genes involved in Synthesis of very long-chain fatty acyl-CoAs
0.0	1.0	REACTOME KINESINS	Genes involved in Kinesins
0.0	0.7	REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION	Genes involved in Apoptosis induced DNA fragmentation
0.0	0.6	REACTOME ALPHA LINOLENIC ACID ALA METABOLISM	Genes involved in alpha-linolenic acid (ALA) metabolism
0.0	0.3	REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL	Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol
0.0	1.7	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.0	0.1	REACTOME FGFR4 LIGAND BINDING AND ACTIVATION	Genes involved in FGFR4 ligand binding and activation
0.0	0.4	REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE	Genes involved in Reversible Hydration of Carbon Dioxide
0.0	1.6	REACTOME STRIATED MUSCLE CONTRACTION	Genes involved in Striated Muscle Contraction
0.0	0.2	REACTOME FATTY ACYL COA BIOSYNTHESIS	Genes involved in Fatty Acyl-CoA Biosynthesis
0.0	0.9	REACTOME REGULATION OF BETA CELL DEVELOPMENT	Genes involved in Regulation of beta-cell development
0.0	1.0	REACTOME GLYCOSPHINGOLIPID METABOLISM	Genes involved in Glycosphingolipid metabolism
0.0	2.9	REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION	Genes involved in Factors involved in megakaryocyte development and platelet production
0.0	0.6	REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE	Genes involved in Formation of Fibrin Clot (Clotting Cascade)
0.0	0.4	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.0	0.6	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.0	0.2	REACTOME FGFR LIGAND BINDING AND ACTIVATION	Genes involved in FGFR ligand binding and activation
0.0	0.8	REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS	Genes involved in Apoptotic cleavage of cellular proteins
0.0	0.4	REACTOME MRNA 3 END PROCESSING	Genes involved in mRNA 3'-end processing
0.0	0.5	REACTOME SIGNALING BY BMP	Genes involved in Signaling by BMP
0.0	0.3	REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION	Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.0	0.4	REACTOME CHONDROITIN SULFATE BIOSYNTHESIS	Genes involved in Chondroitin sulfate biosynthesis
0.0	0.5	REACTOME ERK MAPK TARGETS	Genes involved in ERK/MAPK targets
0.0	0.3	REACTOME INSULIN RECEPTOR RECYCLING	Genes involved in Insulin receptor recycling
0.0	0.2	REACTOME HORMONE LIGAND BINDING RECEPTORS	Genes involved in Hormone ligand-binding receptors
0.0	0.1	REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION	Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.4	4.2	GO:0060620	regulation of cholesterol import(GO:0060620) negative regulation of cholesterol import(GO:0060621) regulation of sterol import(GO:2000909) negative regulation of sterol import(GO:2000910)
1.1	4.3	GO:0038018	Wnt receptor catabolic process(GO:0038018)
0.7	3.4	GO:0002415	immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415)
0.5	2.1	GO:0006542	glutamine biosynthetic process(GO:0006542)
0.5	1.4	GO:2000296	negative regulation of hydrogen peroxide catabolic process(GO:2000296)
0.4	1.3	GO:1903697	negative regulation of microvillus assembly(GO:1903697)
0.3	0.9	GO:0035854	regulation of primitive erythrocyte differentiation(GO:0010725) eosinophil fate commitment(GO:0035854)
0.3	0.9	GO:0060319	primitive erythrocyte differentiation(GO:0060319) regulation of protein kinase D signaling(GO:1903570) positive regulation of protein kinase D signaling(GO:1903572)
0.3	0.9	GO:0090427	activation of meiosis(GO:0090427)
0.3	0.8	GO:2000977	midbrain-hindbrain boundary morphogenesis(GO:0021555) trochlear nerve development(GO:0021558) regulation of timing of neuron differentiation(GO:0060164) regulation of forebrain neuron differentiation(GO:2000977)
0.3	0.8	GO:0044537	regulation of circulating fibrinogen levels(GO:0044537)
0.3	0.8	GO:0019853	L-ascorbic acid biosynthetic process(GO:0019853) negative regulation of DNA catabolic process(GO:1903625) regulation of aminoacyl-tRNA ligase activity(GO:1903630)
0.2	1.0	GO:0030037	actin filament reorganization involved in cell cycle(GO:0030037)
0.2	1.5	GO:2001181	positive regulation of interleukin-10 secretion(GO:2001181)
0.2	7.5	GO:0045746	negative regulation of Notch signaling pathway(GO:0045746)
0.2	0.7	GO:1904247	positive regulation of polynucleotide adenylyltransferase activity(GO:1904247)
0.2	1.3	GO:0098707	ferrous iron import into cell(GO:0097460) ferrous iron import across plasma membrane(GO:0098707)
0.2	0.6	GO:0070858	nitrogen catabolite regulation of transcription from RNA polymerase II promoter(GO:0001079) nitrogen catabolite activation of transcription from RNA polymerase II promoter(GO:0001080) regulation of urea metabolic process(GO:0034255) intracellular bile acid receptor signaling pathway(GO:0038185) negative regulation of bile acid biosynthetic process(GO:0070858) interleukin-17 secretion(GO:0072615) nitrogen catabolite regulation of transcription(GO:0090293) nitrogen catabolite activation of transcription(GO:0090294) regulation of nitrogen cycle metabolic process(GO:1903314) negative regulation of bile acid metabolic process(GO:1904252) positive regulation of glutamate metabolic process(GO:2000213) regulation of ammonia assimilation cycle(GO:2001248) positive regulation of ammonia assimilation cycle(GO:2001250)
0.2	1.0	GO:0060741	prostate gland stromal morphogenesis(GO:0060741)
0.2	0.9	GO:1904141	positive regulation of odontogenesis of dentin-containing tooth(GO:0042488) mammary gland fat development(GO:0060611) positive regulation of macrophage colony-stimulating factor signaling pathway(GO:1902228) positive regulation of response to macrophage colony-stimulating factor(GO:1903971) positive regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903974) positive regulation of microglial cell migration(GO:1904141)
0.2	0.7	GO:0032218	riboflavin transport(GO:0032218)
0.2	0.5	GO:0061386	closure of optic fissure(GO:0061386) negative regulation of integrin-mediated signaling pathway(GO:2001045)
0.2	0.6	GO:0015910	peroxisomal long-chain fatty acid import(GO:0015910)
0.2	0.6	GO:1903691	positive regulation of wound healing, spreading of epidermal cells(GO:1903691)
0.2	0.9	GO:1902730	regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010908) positive regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010909) canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition(GO:0044334) positive regulation of proteoglycan biosynthetic process(GO:1902730)
0.1	1.3	GO:1904352	positive regulation of protein catabolic process in the vacuole(GO:1904352)
0.1	0.9	GO:0070560	protein secretion by platelet(GO:0070560)
0.1	0.7	GO:0048133	germ-line stem cell division(GO:0042078) male germ-line stem cell asymmetric division(GO:0048133) germline stem cell asymmetric division(GO:0098728)
0.1	1.1	GO:1902474	positive regulation of protein localization to synapse(GO:1902474)
0.1	1.8	GO:1990573	potassium ion import across plasma membrane(GO:1990573)
0.1	0.4	GO:0008063	Toll signaling pathway(GO:0008063)
0.1	0.8	GO:0043353	enucleate erythrocyte differentiation(GO:0043353)
0.1	0.7	GO:0021999	neural plate anterior/posterior regionalization(GO:0021999)
0.1	0.5	GO:1904977	lymphatic endothelial cell migration(GO:1904977)
0.1	0.5	GO:1904154	positive regulation of retrograde protein transport, ER to cytosol(GO:1904154)
0.1	0.9	GO:0071578	zinc II ion transmembrane import(GO:0071578)
0.1	0.5	GO:0007352	zygotic specification of dorsal/ventral axis(GO:0007352)
0.1	0.1	GO:0003415	chondrocyte hypertrophy(GO:0003415)
0.1	0.7	GO:0006682	galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)
0.1	0.7	GO:0086042	cardiac muscle cell-cardiac muscle cell adhesion(GO:0086042) bundle of His cell-Purkinje myocyte adhesion involved in cell communication(GO:0086073)
0.1	0.2	GO:1900175	positive regulation of epithelial cell proliferation involved in prostate gland development(GO:0060769) regulation of nodal signaling pathway involved in determination of left/right asymmetry(GO:1900145) regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry(GO:1900175)
0.1	0.6	GO:0007256	activation of JNKK activity(GO:0007256)
0.1	0.6	GO:0007598	blood coagulation, extrinsic pathway(GO:0007598)
0.1	0.5	GO:1903385	regulation of homophilic cell adhesion(GO:1903385)
0.1	0.3	GO:1990535	transformation of host cell by virus(GO:0019087) neuron projection maintenance(GO:1990535)
0.1	0.2	GO:0060585	positive regulation of the force of heart contraction by chemical signal(GO:0003099) regulation of prostaglandin-endoperoxide synthase activity(GO:0060584) positive regulation of prostaglandin-endoperoxide synthase activity(GO:0060585)
0.1	0.4	GO:0002943	tRNA dihydrouridine synthesis(GO:0002943)
0.1	1.0	GO:0051256	mitotic spindle midzone assembly(GO:0051256)
0.1	0.3	GO:0007538	primary sex determination(GO:0007538)
0.1	0.5	GO:2000491	positive regulation of hepatic stellate cell activation(GO:2000491)
0.1	0.3	GO:0019276	UDP-N-acetylgalactosamine metabolic process(GO:0019276) chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0050653)
0.1	0.3	GO:0060010	Sertoli cell fate commitment(GO:0060010)
0.1	0.2	GO:0038162	erythropoietin-mediated signaling pathway(GO:0038162)
0.1	3.3	GO:0018196	peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1	0.6	GO:0006335	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.1	0.2	GO:0045872	positive regulation of rhodopsin gene expression(GO:0045872)
0.1	0.2	GO:0035752	lysosomal lumen pH elevation(GO:0035752)
0.1	0.2	GO:1990637	response to prolactin(GO:1990637)
0.1	0.6	GO:0035414	negative regulation of catenin import into nucleus(GO:0035414)
0.1	0.4	GO:1903659	regulation of complement-dependent cytotoxicity(GO:1903659)
0.0	0.1	GO:1903371	regulation of endoplasmic reticulum tubular network organization(GO:1903371)
0.0	0.3	GO:0006642	triglyceride mobilization(GO:0006642)
0.0	0.2	GO:0018364	peptidyl-glutamine methylation(GO:0018364)
0.0	1.5	GO:0051354	negative regulation of oxidoreductase activity(GO:0051354)
0.0	0.5	GO:0032808	lacrimal gland development(GO:0032808)
0.0	0.2	GO:0021564	vagus nerve development(GO:0021564)
0.0	1.2	GO:0060445	branching involved in salivary gland morphogenesis(GO:0060445)
0.0	0.2	GO:0090080	positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway(GO:0090080)
0.0	0.3	GO:0050915	sensory perception of sour taste(GO:0050915)
0.0	0.9	GO:0003416	endochondral bone growth(GO:0003416)
0.0	0.1	GO:0046946	hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.0	0.6	GO:0051382	kinetochore assembly(GO:0051382)
0.0	0.3	GO:0070836	caveola assembly(GO:0070836)
0.0	0.5	GO:1903830	magnesium ion transmembrane transport(GO:1903830)
0.0	1.5	GO:0090140	regulation of mitochondrial fission(GO:0090140)
0.0	0.4	GO:0034447	very-low-density lipoprotein particle clearance(GO:0034447)
0.0	0.4	GO:0014809	regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.0	0.1	GO:0038178	complement component C5a signaling pathway(GO:0038178)
0.0	0.1	GO:0003408	optic cup formation involved in camera-type eye development(GO:0003408)
0.0	0.4	GO:0015886	heme transport(GO:0015886)
0.0	0.3	GO:0045657	positive regulation of monocyte differentiation(GO:0045657)
0.0	0.4	GO:0034378	chylomicron assembly(GO:0034378)
0.0	0.1	GO:0006447	regulation of translational initiation by iron(GO:0006447)
0.0	0.3	GO:0043615	astrocyte cell migration(GO:0043615)
0.0	0.2	GO:0072249	metanephric glomerular epithelium development(GO:0072244) metanephric glomerular visceral epithelial cell differentiation(GO:0072248) metanephric glomerular visceral epithelial cell development(GO:0072249) metanephric glomerular epithelial cell differentiation(GO:0072312) metanephric glomerular epithelial cell development(GO:0072313)
0.0	0.1	GO:0061198	fungiform papilla formation(GO:0061198)
0.0	0.2	GO:0014894	response to muscle inactivity involved in regulation of muscle adaptation(GO:0014877) response to denervation involved in regulation of muscle adaptation(GO:0014894)
0.0	0.1	GO:1902044	regulation of Fas signaling pathway(GO:1902044)
0.0	0.1	GO:0039506	modulation by virus of host molecular function(GO:0039506) suppression by virus of host molecular function(GO:0039507) suppression by virus of host catalytic activity(GO:0039513) modulation by virus of host catalytic activity(GO:0039516) suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process(GO:0039650) negative regulation by symbiont of host catalytic activity(GO:0052053) negative regulation by symbiont of host molecular function(GO:0052056) modulation by symbiont of host catalytic activity(GO:0052148)
0.0	0.1	GO:0000965	mitochondrial RNA 3'-end processing(GO:0000965)
0.0	0.3	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0	0.1	GO:0038155	interleukin-23-mediated signaling pathway(GO:0038155)
0.0	0.3	GO:0006685	sphingomyelin catabolic process(GO:0006685) positive regulation of sphingolipid biosynthetic process(GO:0090154) positive regulation of ceramide biosynthetic process(GO:2000304)
0.0	0.1	GO:0061088	regulation of sequestering of zinc ion(GO:0061088)
0.0	0.2	GO:0045144	meiotic sister chromatid segregation(GO:0045144)
0.0	0.3	GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
0.0	0.3	GO:0090400	stress-induced premature senescence(GO:0090400)
0.0	0.4	GO:0097034	mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0	0.7	GO:0035338	long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.0	0.1	GO:0055073	cadmium ion homeostasis(GO:0055073)
0.0	0.4	GO:0046949	fatty-acyl-CoA biosynthetic process(GO:0046949)
0.0	0.2	GO:0072718	response to cisplatin(GO:0072718)
0.0	0.6	GO:0035563	positive regulation of chromatin binding(GO:0035563)
0.0	0.3	GO:0045721	negative regulation of gluconeogenesis(GO:0045721)
0.0	0.1	GO:1904627	response to phorbol 13-acetate 12-myristate(GO:1904627) cellular response to phorbol 13-acetate 12-myristate(GO:1904628)
0.0	0.2	GO:0018916	nitrobenzene metabolic process(GO:0018916)
0.0	0.6	GO:0016338	calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.0	0.3	GO:1902659	regulation of glucose mediated signaling pathway(GO:1902659)
0.0	0.1	GO:0072675	multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.0	0.2	GO:1903715	regulation of aerobic respiration(GO:1903715)
0.0	0.1	GO:0031914	negative regulation of synaptic plasticity(GO:0031914)
0.0	0.1	GO:0090038	negative regulation of protein kinase C signaling(GO:0090038)
0.0	0.1	GO:0014054	positive regulation of gamma-aminobutyric acid secretion(GO:0014054)
0.0	0.7	GO:0006309	apoptotic DNA fragmentation(GO:0006309)
0.0	0.1	GO:0021769	orbitofrontal cortex development(GO:0021769) glial cell-derived neurotrophic factor secretion(GO:0044467) regulation of glial cell-derived neurotrophic factor secretion(GO:1900166) positive regulation of glial cell-derived neurotrophic factor secretion(GO:1900168)
0.0	1.2	GO:0034260	negative regulation of GTPase activity(GO:0034260)
0.0	0.0	GO:0048294	negative regulation of isotype switching to IgE isotypes(GO:0048294)
0.0	1.4	GO:0045652	regulation of megakaryocyte differentiation(GO:0045652)
0.0	0.1	GO:0042636	negative regulation of hair cycle(GO:0042636)
0.0	0.1	GO:1903788	mycotoxin catabolic process(GO:0043387) aflatoxin catabolic process(GO:0046223) organic heteropentacyclic compound catabolic process(GO:1901377) regulation of glutathione biosynthetic process(GO:1903786) positive regulation of glutathione biosynthetic process(GO:1903788)
0.0	0.3	GO:0021516	dorsal spinal cord development(GO:0021516)
0.0	0.2	GO:0017187	peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214)
0.0	0.2	GO:0002098	tRNA wobble uridine modification(GO:0002098)
0.0	0.1	GO:1901052	sarcosine metabolic process(GO:1901052) sarcosine catabolic process(GO:1901053)
0.0	0.1	GO:0036496	regulation of translational initiation by eIF2 alpha dephosphorylation(GO:0036496)
0.0	0.1	GO:0034729	histone H3-K79 methylation(GO:0034729)
0.0	0.1	GO:0006268	DNA unwinding involved in DNA replication(GO:0006268)
0.0	0.2	GO:0071763	nuclear membrane organization(GO:0071763)
0.0	0.1	GO:0060088	auditory receptor cell stereocilium organization(GO:0060088)
0.0	0.5	GO:0035825	reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0	0.3	GO:0033689	negative regulation of osteoblast proliferation(GO:0033689)
0.0	0.8	GO:0045604	regulation of epidermal cell differentiation(GO:0045604)
0.0	1.3	GO:0016032	viral process(GO:0016032)
0.0	0.0	GO:0032621	interleukin-18 production(GO:0032621)
0.0	0.2	GO:0010642	negative regulation of platelet-derived growth factor receptor signaling pathway(GO:0010642)
0.0	0.2	GO:0071467	cellular response to pH(GO:0071467)
0.0	0.1	GO:0042631	cellular response to water deprivation(GO:0042631)
0.0	0.3	GO:0051569	regulation of histone H3-K4 methylation(GO:0051569)
0.0	1.0	GO:0033275	muscle filament sliding(GO:0030049) actin-myosin filament sliding(GO:0033275)
0.0	0.2	GO:0007252	I-kappaB phosphorylation(GO:0007252)
0.0	0.1	GO:0034384	high-density lipoprotein particle clearance(GO:0034384)
0.0	0.3	GO:0043153	entrainment of circadian clock by photoperiod(GO:0043153)
0.0	0.6	GO:0030212	hyaluronan metabolic process(GO:0030212)
0.0	0.2	GO:0035970	peptidyl-threonine dephosphorylation(GO:0035970)
0.0	0.1	GO:0017182	peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0	0.1	GO:0007512	adult heart development(GO:0007512)
0.0	0.1	GO:0007221	positive regulation of transcription of Notch receptor target(GO:0007221)
0.0	0.3	GO:0046513	ceramide biosynthetic process(GO:0046513)
0.0	0.1	GO:0032790	ribosome disassembly(GO:0032790)