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ENCODE cell lines, expression (Ernst 2011)
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Results for GAGAACU
Z-value: 0.10
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miRNA associated with seed GAGAACU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-146a-5p
|
MIMAT0000449 |
|
hsa-miR-146b-5p
|
MIMAT0002809 |
|
hsa-miR-7153-5p
|
MIMAT0028216 |
Activity profile of GAGAACU motif
Sorted Z-values of GAGAACU motif
Network of associatons between targets according to the STRING database.
First level regulatory network of GAGAACU
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_+_56014949 | 0.07 |
ENST00000327381.6 |
XKR4 |
XK, Kell blood group complex subunit-related family, member 4 |
| chr9_+_71320596 | 0.03 |
ENST00000265382.3 |
PIP5K1B |
phosphatidylinositol-4-phosphate 5-kinase, type I, beta |
| chr6_-_90121938 | 0.02 |
ENST00000369415.4 |
RRAGD |
Ras-related GTP binding D |
| chr3_-_79068594 | 0.02 |
ENST00000436010.2 |
ROBO1 |
roundabout, axon guidance receptor, homolog 1 (Drosophila) |
| chr2_+_113239710 | 0.02 |
ENST00000233336.6 |
TTL |
tubulin tyrosine ligase |
| chr4_+_85504075 | 0.02 |
ENST00000295887.5 |
CDS1 |
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 |
| chr8_+_104831472 | 0.02 |
ENST00000262231.10 ENST00000507740.1 |
RIMS2 |
regulating synaptic membrane exocytosis 2 |
| chr10_+_120967072 | 0.02 |
ENST00000392870.2 |
GRK5 |
G protein-coupled receptor kinase 5 |
| chr2_+_85198216 | 0.02 |
ENST00000456682.1 ENST00000409785.4 |
KCMF1 |
potassium channel modulatory factor 1 |
| chr18_+_11981427 | 0.01 |
ENST00000269159.3 |
IMPA2 |
inositol(myo)-1(or 4)-monophosphatase 2 |
| chr2_-_166930131 | 0.01 |
ENST00000303395.4 ENST00000409050.1 ENST00000423058.2 ENST00000375405.3 |
SCN1A |
sodium channel, voltage-gated, type I, alpha subunit |
| chr2_-_208030647 | 0.01 |
ENST00000309446.6 |
KLF7 |
Kruppel-like factor 7 (ubiquitous) |
| chr6_+_160390102 | 0.01 |
ENST00000356956.1 |
IGF2R |
insulin-like growth factor 2 receptor |
| chr17_-_38020392 | 0.01 |
ENST00000346872.3 ENST00000439167.2 ENST00000377945.3 ENST00000394189.2 ENST00000377944.3 ENST00000377958.2 ENST00000535189.1 ENST00000377952.2 |
IKZF3 |
IKAROS family zinc finger 3 (Aiolos) |
| chr18_+_19749386 | 0.01 |
ENST00000269216.3 |
GATA6 |
GATA binding protein 6 |
| chr4_-_100867864 | 0.01 |
ENST00000442697.2 |
DNAJB14 |
DnaJ (Hsp40) homolog, subfamily B, member 14 |
| chr15_+_92396920 | 0.01 |
ENST00000318445.6 |
SLCO3A1 |
solute carrier organic anion transporter family, member 3A1 |
| chr3_-_138553594 | 0.01 |
ENST00000477593.1 ENST00000483968.1 |
PIK3CB |
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta |
| chr1_+_32930647 | 0.01 |
ENST00000609129.1 |
ZBTB8B |
zinc finger and BTB domain containing 8B |
| chr4_-_41750922 | 0.01 |
ENST00000226382.2 |
PHOX2B |
paired-like homeobox 2b |
| chr10_+_88516396 | 0.01 |
ENST00000372037.3 |
BMPR1A |
bone morphogenetic protein receptor, type IA |
| chr3_-_164913777 | 0.01 |
ENST00000475390.1 |
SLITRK3 |
SLIT and NTRK-like family, member 3 |
| chr3_-_52479043 | 0.01 |
ENST00000231721.2 ENST00000475739.1 |
SEMA3G |
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G |
| chr22_-_37915535 | 0.01 |
ENST00000403299.1 |
CARD10 |
caspase recruitment domain family, member 10 |
| chr17_-_30669138 | 0.00 |
ENST00000225805.4 ENST00000577809.1 |
C17orf75 |
chromosome 17 open reading frame 75 |
| chr8_-_89339705 | 0.00 |
ENST00000286614.6 |
MMP16 |
matrix metallopeptidase 16 (membrane-inserted) |
| chr1_+_26737253 | 0.00 |
ENST00000326279.6 |
LIN28A |
lin-28 homolog A (C. elegans) |
| chr2_-_37193606 | 0.00 |
ENST00000379213.2 ENST00000263918.4 |
STRN |
striatin, calmodulin binding protein |
| chr14_+_103388976 | 0.00 |
ENST00000299155.5 |
AMN |
amnion associated transmembrane protein |
| chr20_+_62795827 | 0.00 |
ENST00000328439.1 ENST00000536311.1 |
MYT1 |
myelin transcription factor 1 |
| chrX_-_41782249 | 0.00 |
ENST00000442742.2 ENST00000421587.2 ENST00000378166.4 ENST00000318588.9 ENST00000361962.4 |
CASK |
calcium/calmodulin-dependent serine protein kinase (MAGUK family) |
| chr1_+_32573636 | 0.00 |
ENST00000373625.3 |
KPNA6 |
karyopherin alpha 6 (importin alpha 7) |
| chr17_+_28804380 | 0.00 |
ENST00000225724.5 ENST00000451249.2 ENST00000467337.2 ENST00000581721.1 ENST00000414833.2 |
GOSR1 |
golgi SNAP receptor complex member 1 |
| chr9_-_34589700 | 0.00 |
ENST00000351266.4 |
CNTFR |
ciliary neurotrophic factor receptor |
| chr8_+_1449532 | 0.00 |
ENST00000421627.2 |
DLGAP2 |
discs, large (Drosophila) homolog-associated protein 2 |
| chr3_-_125094093 | 0.00 |
ENST00000484491.1 ENST00000492394.1 ENST00000471196.1 ENST00000468369.1 ENST00000544464.1 ENST00000485866.1 ENST00000360647.4 |
ZNF148 |
zinc finger protein 148 |
| chr13_+_27131887 | 0.00 |
ENST00000335327.5 |
WASF3 |
WAS protein family, member 3 |
| chr17_-_8055747 | 0.00 |
ENST00000317276.4 ENST00000581703.1 |
PER1 |
period circadian clock 1 |
| chr15_-_52821247 | 0.00 |
ENST00000399231.3 ENST00000399233.2 |
MYO5A |
myosin VA (heavy chain 12, myoxin) |
| chr6_+_76458909 | 0.00 |
ENST00000369981.3 ENST00000369985.4 |
MYO6 |
myosin VI |
| chr14_-_25519095 | 0.00 |
ENST00000419632.2 ENST00000358326.2 ENST00000396700.1 ENST00000548724.1 |
STXBP6 |
syntaxin binding protein 6 (amisyn) |