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ENCODE cell lines, expression (Ernst 2011)

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Results for GAUAUGU

Z-value: 0.25

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miRNA associated with seed GAUAUGU

NamemiRBASE accession
hsa-miR-190a-5p
MIMAT0000458
hsa-miR-190b
MIMAT0004929

Activity profile of GAUAUGU motif

Sorted Z-values of GAUAUGU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GAUAUGU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr12_-_31744031 0.36 ENST00000389082.5
 DENND5B
 DENN/MADD domain containing 5B
chr18_-_53255766 0.30 ENST00000566286.1
ENST00000564999.1
ENST00000566279.1
ENST00000354452.3
ENST00000356073.4
 TCF4
 transcription factor 4
chr5_+_61602055 0.25 ENST00000381103.2
 KIF2A
 kinesin heavy chain member 2A
chr8_+_61591337 0.22 ENST00000423902.2
 CHD7
 chromodomain helicase DNA binding protein 7
chr12_+_27396901 0.18 ENST00000541191.1
ENST00000389032.3
 STK38L
 serine/threonine kinase 38 like
chr7_+_24612935 0.14 ENST00000222644.5
 MPP6
 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
chr19_-_1652575 0.13 ENST00000587235.1
ENST00000262965.5
 TCF3
 transcription factor 3
chr2_+_208394616 0.11 ENST00000432329.2
ENST00000353267.3
ENST00000445803.1
 CREB1
 cAMP responsive element binding protein 1
chr22_+_40573921 0.11 ENST00000454349.2
ENST00000335727.9
 TNRC6B
 trinucleotide repeat containing 6B
chrX_-_33146477 0.10 ENST00000378677.2
 DMD
 dystrophin
chr4_+_128703295 0.10 ENST00000296464.4
ENST00000508549.1
 HSPA4L
 heat shock 70kDa protein 4-like
chr2_+_228336849 0.07 ENST00000409979.2
ENST00000310078.8
 AGFG1
 ArfGAP with FG repeats 1
chr12_-_102874416 0.07 ENST00000392904.1
ENST00000337514.6
 IGF1
 insulin-like growth factor 1 (somatomedin C)
chr11_-_31839488 0.06 ENST00000419022.1
ENST00000379132.3
ENST00000379129.2
 PAX6
 paired box 6
chr3_-_160283348 0.06 ENST00000334256.4
 KPNA4
 karyopherin alpha 4 (importin alpha 3)
chr3_+_173116225 0.06 ENST00000457714.1
 NLGN1
 neuroligin 1
chr1_-_212004090 0.06 ENST00000366997.4
 LPGAT1
 lysophosphatidylglycerol acyltransferase 1
chr20_-_48099182 0.06 ENST00000371741.4
 KCNB1
 potassium voltage-gated channel, Shab-related subfamily, member 1
chr15_-_68498376 0.05 ENST00000540479.1
ENST00000395465.3
 CALML4
 calmodulin-like 4
chr6_-_91006461 0.04 ENST00000257749.4
ENST00000343122.3
ENST00000406998.2
ENST00000453877.1
 BACH2
 BTB and CNC homology 1, basic leucine zipper transcription factor 2
chr2_+_114647504 0.04 ENST00000263238.2
 ACTR3
 ARP3 actin-related protein 3 homolog (yeast)
chr3_-_126076264 0.04 ENST00000296233.3
 KLF15
 Kruppel-like factor 15
chr7_+_5085452 0.04 ENST00000353796.3
ENST00000396912.1
ENST00000396904.2
 RBAK
RBAK-RBAKDN
 RB-associated KRAB zinc finger
RBAK-RBAKDN readthrough
chr2_-_61765315 0.03 ENST00000406957.1
ENST00000401558.2
 XPO1
 exportin 1 (CRM1 homolog, yeast)
chr12_-_111021110 0.03 ENST00000354300.3
 PPTC7
 PTC7 protein phosphatase homolog (S. cerevisiae)
chr11_-_30038490 0.02 ENST00000328224.6
 KCNA4
 potassium voltage-gated channel, shaker-related subfamily, member 4
chrX_-_109561294 0.02 ENST00000372059.2
ENST00000262844.5
 AMMECR1
 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr1_-_33283754 0.02 ENST00000373477.4
 YARS
 tyrosyl-tRNA synthetase
chr15_-_52821247 0.01 ENST00000399231.3
ENST00000399233.2
 MYO5A
 myosin VA (heavy chain 12, myoxin)
chr8_-_122653630 0.01 ENST00000303924.4
 HAS2
 hyaluronan synthase 2
chr7_-_26240357 0.01 ENST00000354667.4
ENST00000356674.7
 HNRNPA2B1
 heterogeneous nuclear ribonucleoprotein A2/B1
chr19_-_33793430 0.01 ENST00000498907.2
 CEBPA
 CCAAT/enhancer binding protein (C/EBP), alpha
chr8_+_64081118 0.01 ENST00000539294.1
 YTHDF3
 YTH domain family, member 3
chr6_+_69345166 0.00 ENST00000370598.1
 BAI3
 brain-specific angiogenesis inhibitor 3

Gene Ontology Analysis

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070644 vitamin D response element binding(GO:0070644)
0.0 0.3 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0 0.1 GO:1990763 arrestin family protein binding(GO:1990763)

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0003221 right ventricular cardiac muscle tissue morphogenesis(GO:0003221)
0.0 0.1 GO:0098923 retrograde trans-synaptic signaling by soluble gas(GO:0098923) trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by trans-synaptic complex(GO:0099545)
0.0 0.1 GO:1904550 chemotaxis to arachidonic acid(GO:0034670) response to arachidonic acid(GO:1904550)
0.0 0.1 GO:0002326 B cell lineage commitment(GO:0002326) immunoglobulin V(D)J recombination(GO:0033152)
0.0 0.1 GO:0010701 positive regulation of norepinephrine secretion(GO:0010701)
0.0 0.0 GO:0016344 meiotic chromosome movement towards spindle pole(GO:0016344)
0.0 0.1 GO:0001834 trophectodermal cell proliferation(GO:0001834) regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075)
0.0 0.1 GO:0003322 pancreatic A cell development(GO:0003322)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990589 ATF4-CREB1 transcription factor complex(GO:1990589)
0.0 0.1 GO:0016013 syntrophin complex(GO:0016013)