ENCODE cell lines, expression (Ernst 2011)
Name | miRBASE accession |
---|---|
hsa-miR-219a-5p
|
MIMAT0000276 |
hsa-miR-4782-3p
|
MIMAT0019945 |
hsa-miR-6766-3p
|
MIMAT0027433 |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_89007491 | 1.63 |
ENST00000327483.5 ENST00000564416.1 |
CBFA2T3 |
core-binding factor, runt domain, alpha subunit 2; translocated to, 3 |
chr1_-_31230650 | 1.29 |
ENST00000294507.3 |
LAPTM5 |
lysosomal protein transmembrane 5 |
chr5_+_112312416 | 1.17 |
ENST00000389063.2 |
DCP2 |
decapping mRNA 2 |
chr11_-_86666427 | 1.02 |
ENST00000531380.1 |
FZD4 |
frizzled family receptor 4 |
chr8_+_38614807 | 0.99 |
ENST00000330691.6 ENST00000348567.4 |
TACC1 |
transforming, acidic coiled-coil containing protein 1 |
chr15_-_61521495 | 0.95 |
ENST00000335670.6 |
RORA |
RAR-related orphan receptor A |
chr9_+_137218362 | 0.84 |
ENST00000481739.1 |
RXRA |
retinoid X receptor, alpha |
chr6_+_42749759 | 0.80 |
ENST00000314073.5 |
GLTSCR1L |
GLTSCR1-like |
chr16_+_85646763 | 0.79 |
ENST00000411612.1 ENST00000253458.7 |
GSE1 |
Gse1 coiled-coil protein |
chr4_-_105416039 | 0.78 |
ENST00000394767.2 |
CXXC4 |
CXXC finger protein 4 |
chr15_+_74833518 | 0.75 |
ENST00000346246.5 |
ARID3B |
AT rich interactive domain 3B (BRIGHT-like) |
chr18_-_31803435 | 0.74 |
ENST00000589544.1 ENST00000269185.4 ENST00000261592.5 |
NOL4 |
nucleolar protein 4 |
chr12_+_94542459 | 0.70 |
ENST00000258526.4 |
PLXNC1 |
plexin C1 |
chr21_+_45285050 | 0.65 |
ENST00000291572.8 |
AGPAT3 |
1-acylglycerol-3-phosphate O-acyltransferase 3 |
chr6_+_47445467 | 0.63 |
ENST00000359314.5 |
CD2AP |
CD2-associated protein |
chr17_-_66287257 | 0.62 |
ENST00000327268.4 |
SLC16A6 |
solute carrier family 16, member 6 |
chr6_-_166582107 | 0.62 |
ENST00000296946.2 ENST00000461348.2 ENST00000366871.3 |
T |
T, brachyury homolog (mouse) |
chr9_-_127905736 | 0.61 |
ENST00000336505.6 ENST00000373549.4 |
SCAI |
suppressor of cancer cell invasion |
chrX_-_118986911 | 0.61 |
ENST00000276201.2 ENST00000345865.2 |
UPF3B |
UPF3 regulator of nonsense transcripts homolog B (yeast) |
chr17_-_29151794 | 0.59 |
ENST00000324238.6 |
CRLF3 |
cytokine receptor-like factor 3 |
chr4_-_109089573 | 0.59 |
ENST00000265165.1 |
LEF1 |
lymphoid enhancer-binding factor 1 |
chr22_-_21213029 | 0.56 |
ENST00000572273.1 ENST00000255882.6 |
PI4KA |
phosphatidylinositol 4-kinase, catalytic, alpha |
chr19_+_926000 | 0.54 |
ENST00000263620.3 |
ARID3A |
AT rich interactive domain 3A (BRIGHT-like) |
chr11_+_123396528 | 0.54 |
ENST00000322282.7 ENST00000529750.1 |
GRAMD1B |
GRAM domain containing 1B |
chr6_+_107811162 | 0.53 |
ENST00000317357.5 |
SOBP |
sine oculis binding protein homolog (Drosophila) |
chr1_-_212004090 | 0.53 |
ENST00000366997.4 |
LPGAT1 |
lysophosphatidylglycerol acyltransferase 1 |
chr4_-_23891693 | 0.52 |
ENST00000264867.2 |
PPARGC1A |
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha |
chr3_+_43328004 | 0.52 |
ENST00000454177.1 ENST00000429705.2 ENST00000296088.7 ENST00000437827.1 |
SNRK |
SNF related kinase |
chr8_+_61591337 | 0.52 |
ENST00000423902.2 |
CHD7 |
chromodomain helicase DNA binding protein 7 |
chr6_+_167412665 | 0.48 |
ENST00000366847.4 |
FGFR1OP |
FGFR1 oncogene partner |
chr7_-_128695147 | 0.46 |
ENST00000482320.1 ENST00000393245.1 ENST00000471234.1 |
TNPO3 |
transportin 3 |
chr21_+_22370608 | 0.46 |
ENST00000400546.1 |
NCAM2 |
neural cell adhesion molecule 2 |
chr4_+_57774042 | 0.45 |
ENST00000309042.7 |
REST |
RE1-silencing transcription factor |
chr11_-_30038490 | 0.43 |
ENST00000328224.6 |
KCNA4 |
potassium voltage-gated channel, shaker-related subfamily, member 4 |
chr10_-_81205373 | 0.43 |
ENST00000372336.3 |
ZCCHC24 |
zinc finger, CCHC domain containing 24 |
chr10_-_99258135 | 0.42 |
ENST00000327238.10 ENST00000327277.7 ENST00000355839.6 ENST00000437002.1 ENST00000422685.1 |
MMS19 |
MMS19 nucleotide excision repair homolog (S. cerevisiae) |
chr10_-_94003003 | 0.41 |
ENST00000412050.4 |
CPEB3 |
cytoplasmic polyadenylation element binding protein 3 |
chr2_+_54683419 | 0.39 |
ENST00000356805.4 |
SPTBN1 |
spectrin, beta, non-erythrocytic 1 |
chr3_-_72496035 | 0.39 |
ENST00000477973.2 |
RYBP |
RING1 and YY1 binding protein |
chr12_-_120554534 | 0.38 |
ENST00000538903.1 ENST00000534951.1 |
RAB35 |
RAB35, member RAS oncogene family |
chr7_+_21467642 | 0.38 |
ENST00000222584.3 ENST00000432066.2 |
SP4 |
Sp4 transcription factor |
chr2_-_172017343 | 0.37 |
ENST00000431350.2 ENST00000360843.3 |
TLK1 |
tousled-like kinase 1 |
chr11_-_72853091 | 0.37 |
ENST00000311172.7 ENST00000409314.1 |
FCHSD2 |
FCH and double SH3 domains 2 |
chr2_-_208634287 | 0.36 |
ENST00000295417.3 |
FZD5 |
frizzled family receptor 5 |
chr1_+_2985760 | 0.35 |
ENST00000378391.2 ENST00000514189.1 ENST00000270722.5 |
PRDM16 |
PR domain containing 16 |
chr3_+_69812877 | 0.35 |
ENST00000457080.1 ENST00000328528.6 |
MITF |
microphthalmia-associated transcription factor |
chr14_+_74111578 | 0.35 |
ENST00000554113.1 ENST00000555631.2 ENST00000553645.2 ENST00000311089.3 ENST00000555919.3 ENST00000554339.1 ENST00000554871.1 |
DNAL1 |
dynein, axonemal, light chain 1 |
chr5_+_118407053 | 0.35 |
ENST00000311085.8 ENST00000539542.1 |
DMXL1 |
Dmx-like 1 |
chr12_-_93835665 | 0.34 |
ENST00000552442.1 ENST00000550657.1 |
UBE2N |
ubiquitin-conjugating enzyme E2N |
chr3_-_53080047 | 0.34 |
ENST00000482396.1 ENST00000358080.2 ENST00000296295.6 ENST00000394752.3 |
SFMBT1 |
Scm-like with four mbt domains 1 |
chr13_+_58206655 | 0.34 |
ENST00000377918.3 |
PCDH17 |
protocadherin 17 |
chr4_-_122744998 | 0.33 |
ENST00000274026.5 |
CCNA2 |
cyclin A2 |
chr7_+_73703728 | 0.33 |
ENST00000361545.5 ENST00000223398.6 |
CLIP2 |
CAP-GLY domain containing linker protein 2 |
chr4_+_38665810 | 0.32 |
ENST00000261438.5 ENST00000514033.1 |
KLF3 |
Kruppel-like factor 3 (basic) |
chr5_+_65440032 | 0.32 |
ENST00000334121.6 |
SREK1 |
splicing regulatory glutamine/lysine-rich protein 1 |
chr10_+_11206925 | 0.32 |
ENST00000354440.2 ENST00000315874.4 ENST00000427450.1 |
CELF2 |
CUGBP, Elav-like family member 2 |
chr3_+_14989076 | 0.32 |
ENST00000413118.1 ENST00000425241.1 |
NR2C2 |
nuclear receptor subfamily 2, group C, member 2 |
chr14_+_60715928 | 0.30 |
ENST00000395076.4 |
PPM1A |
protein phosphatase, Mg2+/Mn2+ dependent, 1A |
chr3_+_152017181 | 0.30 |
ENST00000498502.1 ENST00000324196.5 ENST00000545754.1 ENST00000357472.3 |
MBNL1 |
muscleblind-like splicing regulator 1 |
chr12_+_60083118 | 0.29 |
ENST00000261187.4 ENST00000543448.1 |
SLC16A7 |
solute carrier family 16 (monocarboxylate transporter), member 7 |
chr3_-_128212016 | 0.28 |
ENST00000498200.1 ENST00000341105.2 |
GATA2 |
GATA binding protein 2 |
chr6_-_16761678 | 0.28 |
ENST00000244769.4 ENST00000436367.1 |
ATXN1 |
ataxin 1 |
chr19_+_14017003 | 0.27 |
ENST00000318003.7 |
CC2D1A |
coiled-coil and C2 domain containing 1A |
chr4_+_75858290 | 0.26 |
ENST00000513238.1 |
PARM1 |
prostate androgen-regulated mucin-like protein 1 |
chr6_+_72596604 | 0.26 |
ENST00000348717.5 ENST00000517960.1 ENST00000518273.1 ENST00000522291.1 ENST00000521978.1 ENST00000520567.1 ENST00000264839.7 |
RIMS1 |
regulating synaptic membrane exocytosis 1 |
chr7_+_39989611 | 0.24 |
ENST00000181839.4 |
CDK13 |
cyclin-dependent kinase 13 |
chr1_+_33283043 | 0.24 |
ENST00000373476.1 ENST00000373475.5 ENST00000529027.1 ENST00000398243.3 |
S100PBP |
S100P binding protein |
chr3_-_125094093 | 0.24 |
ENST00000484491.1 ENST00000492394.1 ENST00000471196.1 ENST00000468369.1 ENST00000544464.1 ENST00000485866.1 ENST00000360647.4 |
ZNF148 |
zinc finger protein 148 |
chr2_-_70995307 | 0.22 |
ENST00000264436.4 ENST00000355733.3 ENST00000447731.2 ENST00000430656.1 ENST00000413157.2 |
ADD2 |
adducin 2 (beta) |
chr4_+_55095264 | 0.22 |
ENST00000257290.5 |
PDGFRA |
platelet-derived growth factor receptor, alpha polypeptide |
chr3_-_24536253 | 0.22 |
ENST00000428492.1 ENST00000396671.2 ENST00000431815.1 ENST00000418247.1 ENST00000416420.1 ENST00000356447.4 |
THRB |
thyroid hormone receptor, beta |
chr2_+_24714729 | 0.22 |
ENST00000406961.1 ENST00000405141.1 |
NCOA1 |
nuclear receptor coactivator 1 |
chr2_-_148778258 | 0.21 |
ENST00000392857.5 ENST00000457954.1 ENST00000392858.1 ENST00000542387.1 |
ORC4 |
origin recognition complex, subunit 4 |
chr6_-_86352642 | 0.21 |
ENST00000355238.6 |
SYNCRIP |
synaptotagmin binding, cytoplasmic RNA interacting protein |
chr2_-_122407097 | 0.21 |
ENST00000409078.3 |
CLASP1 |
cytoplasmic linker associated protein 1 |
chr17_-_73975444 | 0.20 |
ENST00000293217.5 ENST00000537812.1 |
ACOX1 |
acyl-CoA oxidase 1, palmitoyl |
chr7_+_139044621 | 0.20 |
ENST00000354926.4 |
C7orf55-LUC7L2 |
C7orf55-LUC7L2 readthrough |
chr17_+_80477571 | 0.20 |
ENST00000335255.5 |
FOXK2 |
forkhead box K2 |
chr11_+_61583721 | 0.19 |
ENST00000257261.6 |
FADS2 |
fatty acid desaturase 2 |
chr9_+_112403088 | 0.19 |
ENST00000448454.2 |
PALM2 |
paralemmin 2 |
chr1_+_65730385 | 0.19 |
ENST00000263441.7 ENST00000395325.3 |
DNAJC6 |
DnaJ (Hsp40) homolog, subfamily C, member 6 |
chr19_-_14316980 | 0.18 |
ENST00000361434.3 ENST00000340736.6 |
LPHN1 |
latrophilin 1 |
chr2_+_166326157 | 0.17 |
ENST00000421875.1 ENST00000314499.7 ENST00000409664.1 |
CSRNP3 |
cysteine-serine-rich nuclear protein 3 |
chr2_+_177028805 | 0.17 |
ENST00000249440.3 |
HOXD3 |
homeobox D3 |
chr16_-_87525651 | 0.16 |
ENST00000268616.4 |
ZCCHC14 |
zinc finger, CCHC domain containing 14 |
chr4_+_174292058 | 0.16 |
ENST00000296504.3 |
SAP30 |
Sin3A-associated protein, 30kDa |
chr15_+_57210818 | 0.16 |
ENST00000438423.2 ENST00000267811.5 ENST00000452095.2 ENST00000559609.1 ENST00000333725.5 |
TCF12 |
transcription factor 12 |
chr11_+_86748863 | 0.16 |
ENST00000340353.7 |
TMEM135 |
transmembrane protein 135 |
chr1_+_167190066 | 0.16 |
ENST00000367866.2 ENST00000429375.2 ENST00000452019.1 ENST00000420254.3 ENST00000541643.3 |
POU2F1 |
POU class 2 homeobox 1 |
chr1_+_180601139 | 0.15 |
ENST00000367590.4 ENST00000367589.3 |
XPR1 |
xenotropic and polytropic retrovirus receptor 1 |
chr19_-_2050852 | 0.15 |
ENST00000541165.1 ENST00000591601.1 |
MKNK2 |
MAP kinase interacting serine/threonine kinase 2 |
chr2_-_201936302 | 0.15 |
ENST00000453765.1 ENST00000452799.1 ENST00000446678.1 ENST00000418596.3 |
FAM126B |
family with sequence similarity 126, member B |
chr1_+_28696111 | 0.15 |
ENST00000373839.3 |
PHACTR4 |
phosphatase and actin regulator 4 |
chr18_+_18943554 | 0.14 |
ENST00000580732.2 |
GREB1L |
growth regulation by estrogen in breast cancer-like |
chr3_+_137483579 | 0.14 |
ENST00000306087.1 |
SOX14 |
SRY (sex determining region Y)-box 14 |
chr22_-_47134077 | 0.14 |
ENST00000541677.1 ENST00000216264.8 |
CERK |
ceramide kinase |
chr22_+_39101728 | 0.14 |
ENST00000216044.5 ENST00000484657.1 |
GTPBP1 |
GTP binding protein 1 |
chr19_-_55690758 | 0.13 |
ENST00000590851.1 |
SYT5 |
synaptotagmin V |
chr6_+_89790490 | 0.13 |
ENST00000336032.3 |
PNRC1 |
proline-rich nuclear receptor coactivator 1 |
chr2_+_204192942 | 0.13 |
ENST00000295851.5 ENST00000261017.5 |
ABI2 |
abl-interactor 2 |
chr18_-_45663666 | 0.13 |
ENST00000535628.2 |
ZBTB7C |
zinc finger and BTB domain containing 7C |
chr5_-_133561752 | 0.13 |
ENST00000519718.1 ENST00000481195.1 |
CTD-2410N18.5 PPP2CA |
S-phase kinase-associated protein 1 protein phosphatase 2, catalytic subunit, alpha isozyme |
chr22_+_31518938 | 0.13 |
ENST00000412985.1 ENST00000331075.5 ENST00000412277.2 ENST00000420017.1 ENST00000400294.2 ENST00000405300.1 ENST00000404390.3 |
INPP5J |
inositol polyphosphate-5-phosphatase J |
chr16_+_69796209 | 0.13 |
ENST00000359154.2 ENST00000561780.1 ENST00000563659.1 ENST00000448661.1 |
WWP2 |
WW domain containing E3 ubiquitin protein ligase 2 |
chr8_-_72268889 | 0.12 |
ENST00000388742.4 |
EYA1 |
eyes absent homolog 1 (Drosophila) |
chr4_+_79697495 | 0.12 |
ENST00000502871.1 ENST00000335016.5 |
BMP2K |
BMP2 inducible kinase |
chr14_+_33408449 | 0.12 |
ENST00000346562.2 ENST00000341321.4 ENST00000548645.1 ENST00000356141.4 ENST00000357798.5 |
NPAS3 |
neuronal PAS domain protein 3 |
chr19_-_17414179 | 0.12 |
ENST00000594194.1 ENST00000247706.3 |
ABHD8 |
abhydrolase domain containing 8 |
chr22_-_37882395 | 0.12 |
ENST00000416983.3 ENST00000424765.2 ENST00000356998.3 |
MFNG |
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
chr15_+_44829255 | 0.12 |
ENST00000261868.5 ENST00000424492.3 |
EIF3J |
eukaryotic translation initiation factor 3, subunit J |
chr19_-_47616992 | 0.12 |
ENST00000253048.5 |
ZC3H4 |
zinc finger CCCH-type containing 4 |
chr5_-_14871866 | 0.12 |
ENST00000284268.6 |
ANKH |
ANKH inorganic pyrophosphate transport regulator |
chr8_+_37654424 | 0.11 |
ENST00000315215.7 |
GPR124 |
G protein-coupled receptor 124 |
chr2_-_166930131 | 0.11 |
ENST00000303395.4 ENST00000409050.1 ENST00000423058.2 ENST00000375405.3 |
SCN1A |
sodium channel, voltage-gated, type I, alpha subunit |
chr14_-_91976488 | 0.11 |
ENST00000554684.1 ENST00000337238.4 ENST00000428424.2 ENST00000554511.1 |
SMEK1 |
SMEK homolog 1, suppressor of mek1 (Dictyostelium) |
chr6_+_152011628 | 0.11 |
ENST00000404742.1 ENST00000440973.1 |
ESR1 |
estrogen receptor 1 |
chr1_+_199996702 | 0.11 |
ENST00000367362.3 |
NR5A2 |
nuclear receptor subfamily 5, group A, member 2 |
chr8_-_71316021 | 0.11 |
ENST00000452400.2 |
NCOA2 |
nuclear receptor coactivator 2 |
chr1_-_115632035 | 0.11 |
ENST00000433172.1 ENST00000369514.2 ENST00000369516.2 ENST00000369515.2 |
TSPAN2 |
tetraspanin 2 |
chr9_+_37800758 | 0.10 |
ENST00000242323.7 |
DCAF10 |
DDB1 and CUL4 associated factor 10 |
chr12_-_42538657 | 0.10 |
ENST00000398675.3 |
GXYLT1 |
glucoside xylosyltransferase 1 |
chr7_+_155089486 | 0.10 |
ENST00000340368.4 ENST00000344756.4 ENST00000425172.1 ENST00000342407.5 |
INSIG1 |
insulin induced gene 1 |
chr2_+_170440844 | 0.10 |
ENST00000260970.3 ENST00000433207.1 ENST00000409714.3 ENST00000462903.1 |
PPIG |
peptidylprolyl isomerase G (cyclophilin G) |
chr16_-_68482440 | 0.09 |
ENST00000219334.5 |
SMPD3 |
sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) |
chr15_+_91411810 | 0.09 |
ENST00000268171.3 |
FURIN |
furin (paired basic amino acid cleaving enzyme) |
chr3_+_29322803 | 0.09 |
ENST00000396583.3 ENST00000383767.2 |
RBMS3 |
RNA binding motif, single stranded interacting protein 3 |
chr1_+_160336851 | 0.09 |
ENST00000302101.5 |
NHLH1 |
nescient helix loop helix 1 |
chr5_+_31193847 | 0.09 |
ENST00000514738.1 ENST00000265071.2 |
CDH6 |
cadherin 6, type 2, K-cadherin (fetal kidney) |
chr20_-_48770174 | 0.08 |
ENST00000341698.2 |
TMEM189-UBE2V1 |
TMEM189-UBE2V1 readthrough |
chr19_-_47975417 | 0.08 |
ENST00000236877.6 |
SLC8A2 |
solute carrier family 8 (sodium/calcium exchanger), member 2 |
chr14_+_102228123 | 0.08 |
ENST00000422945.2 ENST00000554442.1 ENST00000556260.2 ENST00000328724.5 ENST00000557268.1 |
PPP2R5C |
protein phosphatase 2, regulatory subunit B', gamma |
chr7_-_138666053 | 0.08 |
ENST00000440172.1 ENST00000422774.1 |
KIAA1549 |
KIAA1549 |
chr15_+_72766651 | 0.08 |
ENST00000379887.4 |
ARIH1 |
ariadne RBR E3 ubiquitin protein ligase 1 |
chr1_+_178995021 | 0.08 |
ENST00000263733.4 |
FAM20B |
family with sequence similarity 20, member B |
chr1_-_224033596 | 0.07 |
ENST00000391878.2 ENST00000343537.7 |
TP53BP2 |
tumor protein p53 binding protein, 2 |
chr17_+_77751931 | 0.06 |
ENST00000310942.4 ENST00000269399.5 |
CBX2 |
chromobox homolog 2 |
chr1_-_152332480 | 0.06 |
ENST00000388718.5 |
FLG2 |
filaggrin family member 2 |
chr10_+_102505468 | 0.06 |
ENST00000361791.3 ENST00000355243.3 ENST00000428433.1 ENST00000370296.2 |
PAX2 |
paired box 2 |
chr19_+_1407517 | 0.06 |
ENST00000336761.6 ENST00000233078.4 |
DAZAP1 |
DAZ associated protein 1 |
chr2_+_198365122 | 0.05 |
ENST00000604458.1 |
HSPE1-MOB4 |
HSPE1-MOB4 readthrough |
chr1_+_20208870 | 0.05 |
ENST00000375120.3 |
OTUD3 |
OTU domain containing 3 |
chr20_-_48770244 | 0.05 |
ENST00000371650.5 ENST00000371652.4 ENST00000557021.1 |
TMEM189 |
transmembrane protein 189 |
chr4_+_3768075 | 0.05 |
ENST00000509482.1 ENST00000330055.5 |
ADRA2C |
adrenoceptor alpha 2C |
chr2_-_38604398 | 0.05 |
ENST00000443098.1 ENST00000449130.1 ENST00000378954.4 ENST00000539122.1 ENST00000419554.2 ENST00000451483.1 ENST00000406122.1 |
ATL2 |
atlastin GTPase 2 |
chr6_-_109703663 | 0.05 |
ENST00000368961.5 |
CD164 |
CD164 molecule, sialomucin |
chr3_-_33481835 | 0.05 |
ENST00000283629.3 |
UBP1 |
upstream binding protein 1 (LBP-1a) |
chr6_+_56954867 | 0.05 |
ENST00000370708.4 ENST00000370702.1 |
ZNF451 |
zinc finger protein 451 |
chr9_+_110045537 | 0.04 |
ENST00000358015.3 |
RAD23B |
RAD23 homolog B (S. cerevisiae) |
chr5_+_142149955 | 0.04 |
ENST00000378004.3 |
ARHGAP26 |
Rho GTPase activating protein 26 |
chr18_+_43914159 | 0.04 |
ENST00000588679.1 ENST00000269439.7 ENST00000543885.1 |
RNF165 |
ring finger protein 165 |
chr15_-_25684110 | 0.04 |
ENST00000232165.3 |
UBE3A |
ubiquitin protein ligase E3A |
chr1_-_179198702 | 0.04 |
ENST00000502732.1 |
ABL2 |
c-abl oncogene 2, non-receptor tyrosine kinase |
chr11_-_47788847 | 0.04 |
ENST00000263773.5 |
FNBP4 |
formin binding protein 4 |
chr16_+_58497567 | 0.04 |
ENST00000258187.5 |
NDRG4 |
NDRG family member 4 |
chr9_+_115983808 | 0.03 |
ENST00000374210.6 ENST00000374212.4 |
SLC31A1 |
solute carrier family 31 (copper transporter), member 1 |
chr17_-_72889697 | 0.03 |
ENST00000310226.6 |
FADS6 |
fatty acid desaturase 6 |
chr18_+_905104 | 0.03 |
ENST00000579794.1 |
ADCYAP1 |
adenylate cyclase activating polypeptide 1 (pituitary) |
chr7_+_30067973 | 0.03 |
ENST00000258679.7 ENST00000449726.1 ENST00000396257.2 ENST00000396259.1 |
PLEKHA8 |
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 |
chr2_+_113033164 | 0.03 |
ENST00000409871.1 ENST00000343936.4 |
ZC3H6 |
zinc finger CCCH-type containing 6 |
chrX_+_128674213 | 0.03 |
ENST00000371113.4 ENST00000357121.5 |
OCRL |
oculocerebrorenal syndrome of Lowe |
chr10_-_75634260 | 0.03 |
ENST00000372765.1 ENST00000351293.3 |
CAMK2G |
calcium/calmodulin-dependent protein kinase II gamma |
chr3_+_150126101 | 0.02 |
ENST00000361875.3 ENST00000361136.2 |
TSC22D2 |
TSC22 domain family, member 2 |
chr17_-_40021656 | 0.02 |
ENST00000319121.3 |
KLHL11 |
kelch-like family member 11 |
chr2_+_46769798 | 0.02 |
ENST00000238738.4 |
RHOQ |
ras homolog family member Q |
chr8_-_99306611 | 0.02 |
ENST00000341166.3 |
NIPAL2 |
NIPA-like domain containing 2 |
chr5_-_114598548 | 0.02 |
ENST00000379615.3 ENST00000419445.1 |
PGGT1B |
protein geranylgeranyltransferase type I, beta subunit |
chr4_-_153457197 | 0.02 |
ENST00000281708.4 |
FBXW7 |
F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |
chr13_+_22245522 | 0.02 |
ENST00000382353.5 |
FGF9 |
fibroblast growth factor 9 |
chr1_+_184356188 | 0.01 |
ENST00000235307.6 |
C1orf21 |
chromosome 1 open reading frame 21 |
chr11_+_120207787 | 0.01 |
ENST00000397843.2 ENST00000356641.3 |
ARHGEF12 |
Rho guanine nucleotide exchange factor (GEF) 12 |
chr8_+_104033277 | 0.01 |
ENST00000518857.1 ENST00000395862.3 |
ATP6V1C1 |
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 |
chr20_-_48729670 | 0.01 |
ENST00000371657.5 |
UBE2V1 |
ubiquitin-conjugating enzyme E2 variant 1 |
chr3_-_116164306 | 0.01 |
ENST00000490035.2 |
LSAMP |
limbic system-associated membrane protein |
chr20_-_8000426 | 0.00 |
ENST00000527925.1 ENST00000246024.2 |
TMX4 |
thioredoxin-related transmembrane protein 4 |
chr10_-_120514720 | 0.00 |
ENST00000369151.3 ENST00000340214.4 |
CACUL1 |
CDK2-associated, cullin domain 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 0.8 | GO:0045994 | positive regulation of translational initiation by iron(GO:0045994) |
0.3 | 1.0 | GO:0061304 | extracellular matrix-cell signaling(GO:0035426) retinal blood vessel morphogenesis(GO:0061304) |
0.2 | 0.7 | GO:0032911 | negative regulation of transforming growth factor beta1 production(GO:0032911) |
0.2 | 0.6 | GO:0007509 | mesoderm migration involved in gastrulation(GO:0007509) |
0.2 | 1.6 | GO:1903715 | regulation of aerobic respiration(GO:1903715) |
0.2 | 0.5 | GO:0014878 | response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878) regulation of progesterone biosynthetic process(GO:2000182) |
0.2 | 0.5 | GO:0003221 | right ventricular cardiac muscle tissue morphogenesis(GO:0003221) |
0.2 | 1.2 | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290) |
0.2 | 0.5 | GO:2000705 | dense core granule biogenesis(GO:0061110) regulation of dense core granule biogenesis(GO:2000705) |
0.1 | 0.6 | GO:0071895 | odontoblast differentiation(GO:0071895) |
0.1 | 0.4 | GO:0045900 | negative regulation of translational elongation(GO:0045900) |
0.1 | 0.8 | GO:0007352 | zygotic specification of dorsal/ventral axis(GO:0007352) |
0.1 | 0.4 | GO:0060061 | Spemann organizer formation(GO:0060061) |
0.1 | 0.3 | GO:0071314 | cellular response to cocaine(GO:0071314) |
0.1 | 0.4 | GO:1900042 | positive regulation of interleukin-2 secretion(GO:1900042) |
0.1 | 0.3 | GO:0010725 | regulation of primitive erythrocyte differentiation(GO:0010725) eosinophil fate commitment(GO:0035854) |
0.1 | 0.2 | GO:0072275 | metanephric glomerulus morphogenesis(GO:0072275) metanephric glomerulus vasculature morphogenesis(GO:0072276) metanephric glomerular capillary formation(GO:0072277) |
0.1 | 0.3 | GO:1904016 | response to Thyroglobulin triiodothyronine(GO:1904016) |
0.1 | 0.2 | GO:0008050 | female courtship behavior(GO:0008050) |
0.1 | 1.0 | GO:0021702 | cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702) |
0.1 | 0.4 | GO:0000160 | phosphorelay signal transduction system(GO:0000160) |
0.1 | 0.3 | GO:0006499 | N-terminal protein myristoylation(GO:0006499) |
0.0 | 0.1 | GO:2001045 | closure of optic fissure(GO:0061386) negative regulation of integrin-mediated signaling pathway(GO:2001045) |
0.0 | 0.3 | GO:2000807 | regulation of synaptic vesicle clustering(GO:2000807) |
0.0 | 0.4 | GO:0090336 | positive regulation of brown fat cell differentiation(GO:0090336) |
0.0 | 0.6 | GO:0016024 | CDP-diacylglycerol biosynthetic process(GO:0016024) |
0.0 | 0.4 | GO:0001672 | regulation of chromatin assembly or disassembly(GO:0001672) |
0.0 | 0.3 | GO:1901475 | pyruvate transport(GO:0006848) pyruvate transmembrane transport(GO:1901475) |
0.0 | 0.2 | GO:0021615 | glossopharyngeal nerve morphogenesis(GO:0021615) |
0.0 | 0.1 | GO:1901301 | regulation of cargo loading into COPII-coated vesicle(GO:1901301) |
0.0 | 0.5 | GO:0036148 | phosphatidylglycerol acyl-chain remodeling(GO:0036148) |
0.0 | 0.2 | GO:0070934 | CRD-mediated mRNA stabilization(GO:0070934) |
0.0 | 0.2 | GO:1903690 | negative regulation of wound healing, spreading of epidermal cells(GO:1903690) |
0.0 | 0.4 | GO:0048227 | plasma membrane to endosome transport(GO:0048227) |
0.0 | 0.3 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
0.0 | 0.3 | GO:0070070 | proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072) |
0.0 | 0.3 | GO:0033182 | regulation of histone ubiquitination(GO:0033182) |
0.0 | 0.6 | GO:0035024 | negative regulation of Rho protein signal transduction(GO:0035024) |
0.0 | 0.1 | GO:0061113 | pancreas morphogenesis(GO:0061113) |
0.0 | 0.2 | GO:0030643 | cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502) |
0.0 | 0.5 | GO:0034453 | microtubule anchoring(GO:0034453) |
0.0 | 0.2 | GO:0016191 | synaptic vesicle uncoating(GO:0016191) |
0.0 | 0.4 | GO:0035518 | histone H2A monoubiquitination(GO:0035518) |
0.0 | 0.7 | GO:0071526 | semaphorin-plexin signaling pathway(GO:0071526) |
0.0 | 0.4 | GO:0036109 | alpha-linolenic acid metabolic process(GO:0036109) |
0.0 | 0.1 | GO:0031087 | deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087) |
0.0 | 0.1 | GO:0021650 | vestibulocochlear nerve morphogenesis(GO:0021648) vestibulocochlear nerve formation(GO:0021650) |
0.0 | 0.6 | GO:0044803 | multi-organism membrane organization(GO:0044803) |
0.0 | 0.1 | GO:0014004 | microglia differentiation(GO:0014004) microglia development(GO:0014005) |
0.0 | 0.5 | GO:0007158 | neuron cell-cell adhesion(GO:0007158) |
0.0 | 0.1 | GO:0032811 | negative regulation of epinephrine secretion(GO:0032811) |
0.0 | 0.3 | GO:0097151 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.0 | 0.1 | GO:0072513 | positive regulation of secondary heart field cardioblast proliferation(GO:0072513) |
0.0 | 0.1 | GO:2000601 | positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601) |
0.0 | 0.2 | GO:0070816 | phosphorylation of RNA polymerase II C-terminal domain(GO:0070816) |
0.0 | 0.1 | GO:1990167 | protein K27-linked deubiquitination(GO:1990167) |
0.0 | 0.1 | GO:0060523 | prostate epithelial cord elongation(GO:0060523) |
0.0 | 0.1 | GO:0019227 | neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870) |
0.0 | 0.1 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.8 | GO:0004886 | 9-cis retinoic acid receptor activity(GO:0004886) |
0.2 | 0.5 | GO:0032184 | SUMO polymer binding(GO:0032184) |
0.1 | 1.0 | GO:0008142 | oxysterol binding(GO:0008142) |
0.1 | 1.2 | GO:0050072 | m7G(5')pppN diphosphatase activity(GO:0050072) |
0.1 | 0.5 | GO:0030292 | protein tyrosine kinase inhibitor activity(GO:0030292) |
0.1 | 0.3 | GO:0001069 | regulatory region RNA binding(GO:0001069) |
0.1 | 0.6 | GO:0004430 | 1-phosphatidylinositol 4-kinase activity(GO:0004430) |
0.1 | 0.2 | GO:0005017 | platelet-derived growth factor-activated receptor activity(GO:0005017) |
0.1 | 0.3 | GO:0005477 | pyruvate secondary active transmembrane transporter activity(GO:0005477) |
0.1 | 0.5 | GO:0047144 | 2-acylglycerol-3-phosphate O-acyltransferase activity(GO:0047144) |
0.1 | 0.2 | GO:0004768 | stearoyl-CoA 9-desaturase activity(GO:0004768) acyl-CoA desaturase activity(GO:0016215) |
0.1 | 1.4 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
0.1 | 0.3 | GO:0034046 | poly(G) binding(GO:0034046) |
0.1 | 0.2 | GO:0043515 | kinetochore binding(GO:0043515) |
0.0 | 0.6 | GO:0003841 | 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) |
0.0 | 0.6 | GO:0005172 | vascular endothelial growth factor receptor binding(GO:0005172) |
0.0 | 0.7 | GO:0030284 | estrogen receptor activity(GO:0030284) |
0.0 | 0.7 | GO:0017154 | semaphorin receptor activity(GO:0017154) |
0.0 | 0.2 | GO:0000822 | inositol hexakisphosphate binding(GO:0000822) |
0.0 | 0.5 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
0.0 | 0.1 | GO:0030375 | thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375) |
0.0 | 0.3 | GO:0033192 | calmodulin-dependent protein phosphatase activity(GO:0033192) |
0.0 | 0.1 | GO:0033829 | O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829) |
0.0 | 0.5 | GO:0015271 | outward rectifier potassium channel activity(GO:0015271) |
0.0 | 0.4 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.0 | 0.1 | GO:0005315 | inorganic phosphate transmembrane transporter activity(GO:0005315) |
0.0 | 0.2 | GO:0003997 | acyl-CoA oxidase activity(GO:0003997) |
0.0 | 0.1 | GO:0072542 | protein phosphatase activator activity(GO:0072542) |
0.0 | 0.1 | GO:0035252 | UDP-xylosyltransferase activity(GO:0035252) xylosyltransferase activity(GO:0042285) |
0.0 | 0.4 | GO:0030955 | potassium ion binding(GO:0030955) |
0.0 | 0.1 | GO:0001727 | lipid kinase activity(GO:0001727) |
0.0 | 0.2 | GO:0070324 | thyroid hormone binding(GO:0070324) |
0.0 | 0.3 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
0.0 | 0.2 | GO:0017162 | aryl hydrocarbon receptor binding(GO:0017162) |
0.0 | 0.1 | GO:0004938 | alpha2-adrenergic receptor activity(GO:0004938) |
0.0 | 0.5 | GO:0008139 | nuclear localization sequence binding(GO:0008139) |
0.0 | 0.6 | GO:0005487 | nucleocytoplasmic transporter activity(GO:0005487) |
0.0 | 0.4 | GO:0030506 | ankyrin binding(GO:0030506) |
0.0 | 1.7 | GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding(GO:0000980) |
0.0 | 0.3 | GO:0051010 | microtubule plus-end binding(GO:0051010) |
0.0 | 0.5 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.0 | 0.2 | GO:0052658 | inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658) |
0.0 | 0.2 | GO:0003688 | DNA replication origin binding(GO:0003688) |
0.0 | 0.4 | GO:0030159 | receptor signaling complex scaffold activity(GO:0030159) |
0.0 | 0.1 | GO:0005432 | calcium:sodium antiporter activity(GO:0005432) |
0.0 | 0.6 | GO:0008028 | monocarboxylic acid transmembrane transporter activity(GO:0008028) |
0.0 | 3.2 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.0 | 0.2 | GO:0008353 | RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | PID AVB3 INTEGRIN PATHWAY | Integrins in angiogenesis |
0.0 | 1.4 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 1.3 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 1.0 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 0.5 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 0.5 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.9 | PID ERBB4 PATHWAY | ErbB4 signaling events |
0.0 | 1.6 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 0.6 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 0.3 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 1.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 0.3 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
0.0 | 0.5 | ST P38 MAPK PATHWAY | p38 MAPK Pathway |
0.0 | 0.2 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.6 | PID RHOA PATHWAY | RhoA signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.6 | GO:0019034 | viral replication complex(GO:0019034) |
0.1 | 0.3 | GO:0043291 | RAVE complex(GO:0043291) |
0.1 | 0.3 | GO:0031372 | UBC13-MMS2 complex(GO:0031372) |
0.1 | 0.3 | GO:0097124 | cyclin A2-CDK2 complex(GO:0097124) |
0.1 | 0.2 | GO:0002945 | cyclin K-CDK13 complex(GO:0002945) |
0.1 | 1.2 | GO:0031332 | RISC complex(GO:0016442) RNAi effector complex(GO:0031332) |
0.1 | 0.4 | GO:0071817 | MMXD complex(GO:0071817) |
0.1 | 0.6 | GO:1990907 | beta-catenin-TCF complex(GO:1990907) |
0.1 | 0.4 | GO:0032437 | cuticular plate(GO:0032437) |
0.1 | 0.3 | GO:0042272 | nuclear RNA export factor complex(GO:0042272) |
0.0 | 0.3 | GO:0036157 | outer dynein arm(GO:0036157) |
0.0 | 0.9 | GO:0097440 | apical dendrite(GO:0097440) |
0.0 | 0.2 | GO:0030981 | cortical microtubule cytoskeleton(GO:0030981) |
0.0 | 0.2 | GO:0097452 | GAIT complex(GO:0097452) |
0.0 | 0.1 | GO:1990769 | proximal neuron projection(GO:1990769) |
0.0 | 0.1 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.0 | 0.6 | GO:0035145 | exon-exon junction complex(GO:0035145) |
0.0 | 1.8 | GO:0045334 | clathrin-coated endocytic vesicle(GO:0045334) |
0.0 | 0.2 | GO:0000808 | origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664) |
0.0 | 0.2 | GO:0008290 | F-actin capping protein complex(GO:0008290) |
0.0 | 0.1 | GO:0000137 | Golgi cis cisterna(GO:0000137) |
0.0 | 0.3 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.0 | 0.6 | GO:0031941 | filamentous actin(GO:0031941) |
0.0 | 0.5 | GO:0016235 | aggresome(GO:0016235) |
0.0 | 0.1 | GO:0031209 | SCAR complex(GO:0031209) |
0.0 | 0.1 | GO:0097550 | transcriptional preinitiation complex(GO:0097550) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.1 | 1.2 | REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE | Genes involved in mRNA Decay by 5' to 3' Exoribonuclease |
0.0 | 0.6 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.0 | 0.4 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.0 | 0.5 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |
0.0 | 1.0 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.0 | 0.7 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.6 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.0 | 0.4 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.0 | 0.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.2 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
0.0 | 0.3 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.5 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.0 | 0.6 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
0.0 | 0.3 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |
0.0 | 0.3 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.0 | 1.4 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |