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ENCODE cell lines, expression (Ernst 2011)
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Results for GCCUGUC
Z-value: 0.13
Motif logo
miRNA associated with seed GCCUGUC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-214-5p
|
MIMAT0004564 |
Activity profile of GCCUGUC motif
Sorted Z-values of GCCUGUC motif
Network of associatons between targets according to the STRING database.
First level regulatory network of GCCUGUC
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_-_19157248 | 0.12 |
ENST00000242261.5 |
TWIST1 |
twist family bHLH transcription factor 1 |
| chr1_-_244013384 | 0.07 |
ENST00000366539.1 |
AKT3 |
v-akt murine thymoma viral oncogene homolog 3 |
| chr13_+_114238997 | 0.06 |
ENST00000538138.1 ENST00000375370.5 |
TFDP1 |
transcription factor Dp-1 |
| chr3_+_152017181 | 0.06 |
ENST00000498502.1 ENST00000324196.5 ENST00000545754.1 ENST00000357472.3 |
MBNL1 |
muscleblind-like splicing regulator 1 |
| chr1_+_145524891 | 0.05 |
ENST00000369304.3 |
ITGA10 |
integrin, alpha 10 |
| chr4_+_55095264 | 0.05 |
ENST00000257290.5 |
PDGFRA |
platelet-derived growth factor receptor, alpha polypeptide |
| chr5_-_146833485 | 0.04 |
ENST00000398514.3 |
DPYSL3 |
dihydropyrimidinase-like 3 |
| chr2_-_217560248 | 0.04 |
ENST00000233813.4 |
IGFBP5 |
insulin-like growth factor binding protein 5 |
| chr20_-_23030296 | 0.04 |
ENST00000377103.2 |
THBD |
thrombomodulin |
| chr3_-_171178157 | 0.04 |
ENST00000465393.1 ENST00000436636.2 ENST00000369326.5 ENST00000538048.1 ENST00000341852.6 |
TNIK |
TRAF2 and NCK interacting kinase |
| chr3_-_114790179 | 0.04 |
ENST00000462705.1 |
ZBTB20 |
zinc finger and BTB domain containing 20 |
| chr6_+_44187242 | 0.04 |
ENST00000393844.1 |
SLC29A1 |
solute carrier family 29 (equilibrative nucleoside transporter), member 1 |
| chr10_-_118032697 | 0.04 |
ENST00000439649.3 |
GFRA1 |
GDNF family receptor alpha 1 |
| chr1_-_203055129 | 0.03 |
ENST00000241651.4 |
MYOG |
myogenin (myogenic factor 4) |
| chr12_-_54673871 | 0.03 |
ENST00000209875.4 |
CBX5 |
chromobox homolog 5 |
| chr11_-_6633799 | 0.03 |
ENST00000299424.4 |
TAF10 |
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa |
| chr11_+_35684288 | 0.03 |
ENST00000299413.5 |
TRIM44 |
tripartite motif containing 44 |
| chr19_+_30433110 | 0.03 |
ENST00000542441.2 ENST00000392271.1 |
URI1 |
URI1, prefoldin-like chaperone |
| chr17_-_1465924 | 0.03 |
ENST00000573231.1 ENST00000576722.1 ENST00000576761.1 ENST00000576010.2 ENST00000313486.7 ENST00000539476.1 |
PITPNA |
phosphatidylinositol transfer protein, alpha |
| chr17_+_46184911 | 0.03 |
ENST00000580219.1 ENST00000452859.2 ENST00000393405.2 ENST00000439357.2 ENST00000359238.2 |
SNX11 |
sorting nexin 11 |
| chr12_-_42632016 | 0.03 |
ENST00000442791.3 ENST00000327791.4 ENST00000534854.2 ENST00000380788.3 ENST00000380790.4 |
YAF2 |
YY1 associated factor 2 |
| chr2_+_201676256 | 0.03 |
ENST00000452206.1 ENST00000410110.2 ENST00000409600.1 |
BZW1 |
basic leucine zipper and W2 domains 1 |
| chr12_+_70760056 | 0.02 |
ENST00000258111.4 |
KCNMB4 |
potassium large conductance calcium-activated channel, subfamily M, beta member 4 |
| chr15_-_89456593 | 0.02 |
ENST00000558029.1 ENST00000539437.1 ENST00000542878.1 ENST00000268151.7 ENST00000566497.1 |
MFGE8 |
milk fat globule-EGF factor 8 protein |
| chr16_-_85722530 | 0.02 |
ENST00000253462.3 |
GINS2 |
GINS complex subunit 2 (Psf2 homolog) |
| chr5_+_132387633 | 0.02 |
ENST00000304858.2 |
HSPA4 |
heat shock 70kDa protein 4 |
| chr12_-_56583332 | 0.02 |
ENST00000347471.4 ENST00000267064.4 ENST00000394023.3 |
SMARCC2 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 |
| chr6_-_75994536 | 0.02 |
ENST00000475111.2 ENST00000230461.6 |
TMEM30A |
transmembrane protein 30A |
| chr6_+_4021554 | 0.02 |
ENST00000337659.6 |
PRPF4B |
pre-mRNA processing factor 4B |
| chr9_+_77112244 | 0.02 |
ENST00000376896.3 |
RORB |
RAR-related orphan receptor B |
| chr2_+_191273052 | 0.02 |
ENST00000417958.1 ENST00000432036.1 ENST00000392328.1 |
MFSD6 |
major facilitator superfamily domain containing 6 |
| chr9_-_117568365 | 0.02 |
ENST00000374045.4 |
TNFSF15 |
tumor necrosis factor (ligand) superfamily, member 15 |
| chr14_-_61116168 | 0.02 |
ENST00000247182.6 |
SIX1 |
SIX homeobox 1 |
| chr3_-_125094093 | 0.02 |
ENST00000484491.1 ENST00000492394.1 ENST00000471196.1 ENST00000468369.1 ENST00000544464.1 ENST00000485866.1 ENST00000360647.4 |
ZNF148 |
zinc finger protein 148 |
| chr22_-_42466782 | 0.02 |
ENST00000396398.3 ENST00000403363.1 ENST00000402937.1 |
NAGA |
N-acetylgalactosaminidase, alpha- |
| chr11_-_6704513 | 0.02 |
ENST00000532203.1 ENST00000288937.6 |
MRPL17 |
mitochondrial ribosomal protein L17 |
| chr20_+_34894247 | 0.01 |
ENST00000373913.3 |
DLGAP4 |
discs, large (Drosophila) homolog-associated protein 4 |
| chr7_-_127983877 | 0.01 |
ENST00000415472.2 ENST00000478061.1 ENST00000223073.2 ENST00000459726.1 |
RBM28 |
RNA binding motif protein 28 |
| chr1_+_245133062 | 0.01 |
ENST00000366523.1 |
EFCAB2 |
EF-hand calcium binding domain 2 |
| chr17_-_45266542 | 0.01 |
ENST00000531206.1 ENST00000527547.1 ENST00000446365.2 ENST00000575483.1 ENST00000066544.3 |
CDC27 |
cell division cycle 27 |
| chr6_+_44238203 | 0.01 |
ENST00000451188.2 |
TMEM151B |
transmembrane protein 151B |
| chr17_+_30264014 | 0.01 |
ENST00000322652.5 ENST00000580398.1 |
SUZ12 |
SUZ12 polycomb repressive complex 2 subunit |
| chr14_+_75348592 | 0.01 |
ENST00000334220.4 |
DLST |
dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) |
| chr10_-_43903217 | 0.01 |
ENST00000357065.4 |
HNRNPF |
heterogeneous nuclear ribonucleoprotein F |
| chr3_+_137906109 | 0.01 |
ENST00000481646.1 ENST00000469044.1 ENST00000491704.1 ENST00000461600.1 |
ARMC8 |
armadillo repeat containing 8 |
| chr17_+_30677136 | 0.01 |
ENST00000394670.4 ENST00000321233.6 ENST00000394673.2 ENST00000341711.6 ENST00000579634.1 ENST00000580759.1 ENST00000342555.6 ENST00000577908.1 ENST00000394679.5 ENST00000582165.1 |
ZNF207 |
zinc finger protein 207 |
| chr1_+_36348790 | 0.01 |
ENST00000373204.4 |
AGO1 |
argonaute RISC catalytic component 1 |
| chr19_-_15560730 | 0.01 |
ENST00000389282.4 ENST00000263381.7 |
WIZ |
widely interspaced zinc finger motifs |
| chr11_-_6624801 | 0.01 |
ENST00000534343.1 ENST00000254605.6 |
RRP8 |
ribosomal RNA processing 8, methyltransferase, homolog (yeast) |
| chr9_-_74980113 | 0.01 |
ENST00000376962.5 ENST00000376960.4 ENST00000237937.3 |
ZFAND5 |
zinc finger, AN1-type domain 5 |
| chr15_+_92937058 | 0.01 |
ENST00000268164.3 |
ST8SIA2 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 |
| chr1_-_23857698 | 0.01 |
ENST00000361729.2 |
E2F2 |
E2F transcription factor 2 |
| chr8_+_59323823 | 0.01 |
ENST00000399598.2 |
UBXN2B |
UBX domain protein 2B |
| chr17_-_61523535 | 0.01 |
ENST00000584031.1 ENST00000392976.1 |
CYB561 |
cytochrome b561 |
| chr19_+_39616410 | 0.01 |
ENST00000602004.1 ENST00000599470.1 ENST00000321944.4 ENST00000593480.1 ENST00000358301.3 ENST00000593690.1 ENST00000599386.1 |
PAK4 |
p21 protein (Cdc42/Rac)-activated kinase 4 |
| chr16_-_69419871 | 0.01 |
ENST00000603068.1 ENST00000254942.3 ENST00000567296.2 |
TERF2 |
telomeric repeat binding factor 2 |
| chr6_-_39197226 | 0.01 |
ENST00000359534.3 |
KCNK5 |
potassium channel, subfamily K, member 5 |
| chr17_-_39890893 | 0.01 |
ENST00000393939.2 ENST00000347901.4 ENST00000341193.5 ENST00000310778.5 |
HAP1 |
huntingtin-associated protein 1 |
| chr11_-_62572901 | 0.01 |
ENST00000439713.2 ENST00000531131.1 ENST00000530875.1 ENST00000531709.2 ENST00000294172.2 |
NXF1 |
nuclear RNA export factor 1 |
| chrX_+_53078273 | 0.01 |
ENST00000332582.4 |
GPR173 |
G protein-coupled receptor 173 |
| chr2_+_25015968 | 0.01 |
ENST00000380834.2 ENST00000473706.1 |
CENPO |
centromere protein O |
| chr3_+_37493610 | 0.01 |
ENST00000264741.5 |
ITGA9 |
integrin, alpha 9 |
| chr16_+_54964740 | 0.00 |
ENST00000394636.4 |
IRX5 |
iroquois homeobox 5 |
| chrX_+_99839799 | 0.00 |
ENST00000373031.4 |
TNMD |
tenomodulin |
| chr1_+_117602925 | 0.00 |
ENST00000369466.4 |
TTF2 |
transcription termination factor, RNA polymerase II |
| chr14_+_60715928 | 0.00 |
ENST00000395076.4 |
PPM1A |
protein phosphatase, Mg2+/Mn2+ dependent, 1A |
| chr11_-_82782861 | 0.00 |
ENST00000524635.1 ENST00000526205.1 ENST00000527633.1 ENST00000533486.1 ENST00000533276.2 |
RAB30 |
RAB30, member RAS oncogene family |
| chr3_-_9291063 | 0.00 |
ENST00000383836.3 |
SRGAP3 |
SLIT-ROBO Rho GTPase activating protein 3 |
| chr18_-_18691739 | 0.00 |
ENST00000399799.2 |
ROCK1 |
Rho-associated, coiled-coil containing protein kinase 1 |
| chr4_+_699537 | 0.00 |
ENST00000419774.1 ENST00000362003.5 ENST00000400151.2 ENST00000427463.1 ENST00000470161.2 |
PCGF3 |
polycomb group ring finger 3 |
| chr3_-_197686847 | 0.00 |
ENST00000265239.6 |
IQCG |
IQ motif containing G |
| chr11_+_48002076 | 0.00 |
ENST00000418331.2 ENST00000440289.2 |
PTPRJ |
protein tyrosine phosphatase, receptor type, J |
| chr5_-_137090028 | 0.00 |
ENST00000314940.4 |
HNRNPA0 |
heterogeneous nuclear ribonucleoprotein A0 |
| chr20_+_10199468 | 0.00 |
ENST00000254976.2 ENST00000304886.2 |
SNAP25 |
synaptosomal-associated protein, 25kDa |
| chr16_+_29789561 | 0.00 |
ENST00000400752.4 |
ZG16 |
zymogen granule protein 16 |
| chr4_-_39460520 | 0.00 |
ENST00000503040.1 ENST00000504470.1 ENST00000508595.1 ENST00000295955.9 |
RPL9 |
ribosomal protein L9 |
| chr5_-_66492562 | 0.00 |
ENST00000256447.4 |
CD180 |
CD180 molecule |
| chr19_+_1752372 | 0.00 |
ENST00000382349.4 |
ONECUT3 |
one cut homeobox 3 |
Gene Ontology Analysis
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0034680 | integrin alpha10-beta1 complex(GO:0034680) |
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:2000276 | negative regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035359) negative regulation of oxidative phosphorylation uncoupler activity(GO:2000276) |
| 0.0 | 0.0 | GO:0072276 | metanephric glomerulus morphogenesis(GO:0072275) metanephric glomerulus vasculature morphogenesis(GO:0072276) metanephric glomerular capillary formation(GO:0072277) |
| 0.0 | 0.0 | GO:1904204 | regulation of skeletal muscle hypertrophy(GO:1904204) |
| 0.0 | 0.0 | GO:0014878 | response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0001069 | regulatory region RNA binding(GO:0001069) |
| 0.0 | 0.0 | GO:0005017 | platelet-derived growth factor-activated receptor activity(GO:0005017) |
| 0.0 | 0.1 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |