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ENCODE cell lines, expression (Ernst 2011)

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Results for GGAGUGU

Z-value: 0.25

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miRNA associated with seed GGAGUGU

NamemiRBASE accession
hsa-miR-122-5p
MIMAT0000421

Activity profile of GGAGUGU motif

Sorted Z-values of GGAGUGU motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GGAGUGU

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr1_-_72748417 0.27 ENST00000357731.5
 NEGR1
 neuronal growth regulator 1
chr2_-_96811170 0.23 ENST00000288943.4
 DUSP2
 dual specificity phosphatase 2
chr16_+_69599861 0.22 ENST00000354436.2
 NFAT5
 nuclear factor of activated T-cells 5, tonicity-responsive
chr7_+_94285637 0.21 ENST00000482108.1
ENST00000488574.1
 PEG10
 paternally expressed 10
chr10_-_74856608 0.15 ENST00000307116.2
ENST00000373008.2
ENST00000412021.2
ENST00000394890.2
ENST00000263556.3
ENST00000440381.1
 P4HA1
 prolyl 4-hydroxylase, alpha polypeptide I
chr16_+_30077055 0.14 ENST00000564595.2
ENST00000569798.1
 ALDOA
 aldolase A, fructose-bisphosphate
chr10_+_70480963 0.12 ENST00000265872.6
ENST00000535016.1
ENST00000538031.1
ENST00000543719.1
ENST00000539539.1
ENST00000543225.1
ENST00000536012.1
ENST00000494903.2
 CCAR1
 cell division cycle and apoptosis regulator 1
chr15_-_34628951 0.11 ENST00000397707.2
ENST00000560611.1
 SLC12A6
 solute carrier family 12 (potassium/chloride transporter), member 6
chr1_-_245027833 0.10 ENST00000444376.2
 HNRNPU
 heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
chr10_-_23003460 0.10 ENST00000376573.4
 PIP4K2A
 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr8_-_29208183 0.10 ENST00000240100.2
 DUSP4
 dual specificity phosphatase 4
chr8_-_57123815 0.09 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
 PLAG1
 pleiomorphic adenoma gene 1
chr4_-_103266219 0.08 ENST00000394833.2
 SLC39A8
 solute carrier family 39 (zinc transporter), member 8
chr6_+_72596604 0.07 ENST00000348717.5
ENST00000517960.1
ENST00000518273.1
ENST00000522291.1
ENST00000521978.1
ENST00000520567.1
ENST00000264839.7
 RIMS1
 regulating synaptic membrane exocytosis 1
chr17_-_27916621 0.06 ENST00000225394.3
 GIT1
 G protein-coupled receptor kinase interacting ArfGAP 1
chr6_+_108881012 0.06 ENST00000343882.6
 FOXO3
 forkhead box O3
chr19_-_47291843 0.06 ENST00000542575.2
 SLC1A5
 solute carrier family 1 (neutral amino acid transporter), member 5
chr11_+_119076745 0.06 ENST00000264033.4
 CBL
 Cbl proto-oncogene, E3 ubiquitin protein ligase
chr5_+_162864575 0.05 ENST00000512163.1
ENST00000393929.1
ENST00000340828.2
ENST00000511683.2
ENST00000510097.1
ENST00000511490.2
ENST00000510664.1
 CCNG1
 cyclin G1
chr5_+_96271141 0.05 ENST00000231368.5
 LNPEP
 leucyl/cystinyl aminopeptidase
chr15_-_72523454 0.05 ENST00000565154.1
ENST00000565184.1
ENST00000389093.3
ENST00000449901.2
ENST00000335181.5
ENST00000319622.6
 PKM
 pyruvate kinase, muscle
chr17_+_41857793 0.05 ENST00000449302.3
 C17orf105
 chromosome 17 open reading frame 105
chr7_-_95225768 0.04 ENST00000005178.5
 PDK4
 pyruvate dehydrogenase kinase, isozyme 4
chr8_+_102504651 0.04 ENST00000251808.3
ENST00000521085.1
 GRHL2
 grainyhead-like 2 (Drosophila)
chr1_+_36348790 0.04 ENST00000373204.4
 AGO1
 argonaute RISC catalytic component 1
chr6_+_152011628 0.03 ENST00000404742.1
ENST00000440973.1
 ESR1
 estrogen receptor 1
chr1_+_27114418 0.03 ENST00000078527.4
 PIGV
 phosphatidylinositol glycan anchor biosynthesis, class V
chr19_-_2456922 0.03 ENST00000582871.1
ENST00000325327.3
 LMNB2
 lamin B2
chr20_+_32581452 0.03 ENST00000375114.3
ENST00000448364.1
 RALY
 RALY heterogeneous nuclear ribonucleoprotein
chr6_-_45983581 0.03 ENST00000339561.6
 CLIC5
 chloride intracellular channel 5
chr7_+_100318423 0.02 ENST00000252723.2
 EPO
 erythropoietin
chr14_+_33408449 0.02 ENST00000346562.2
ENST00000341321.4
ENST00000548645.1
ENST00000356141.4
ENST00000357798.5
 NPAS3
 neuronal PAS domain protein 3
chr19_-_8373173 0.02 ENST00000537716.2
ENST00000301458.5
 CD320
 CD320 molecule
chr6_-_35464727 0.02 ENST00000402886.3
 TEAD3
 TEA domain family member 3
chr22_+_38201114 0.02 ENST00000340857.2
 H1F0
 H1 histone family, member 0
chr21_-_40685477 0.02 ENST00000342449.3
 BRWD1
 bromodomain and WD repeat domain containing 1
chr11_-_108369101 0.02 ENST00000323468.5
 KDELC2
 KDEL (Lys-Asp-Glu-Leu) containing 2
chr8_-_117886955 0.01 ENST00000297338.2
 RAD21
 RAD21 homolog (S. pombe)
chr19_-_6279932 0.01 ENST00000252674.7
 MLLT1
 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
chr1_-_109940550 0.01 ENST00000256637.6
 SORT1
 sortilin 1
chr5_-_11904152 0.00 ENST00000304623.8
ENST00000458100.2
 CTNND2
 catenin (cadherin-associated protein), delta 2
chr2_-_219925189 0.00 ENST00000295731.6
 IHH
 indian hedgehog
chr17_-_4269768 0.00 ENST00000396981.2
 UBE2G1
 ubiquitin-conjugating enzyme E2G 1
chr16_-_30381580 0.00 ENST00000409939.3
 TBC1D10B
 TBC1 domain family, member 10B
chr14_-_77787198 0.00 ENST00000261534.4
 POMT2
 protein-O-mannosyltransferase 2

Gene Ontology Analysis

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0016222 procollagen-proline 4-dioxygenase complex(GO:0016222)
0.0 0.1 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0071477 hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0 0.1 GO:0001544 initiation of primordial ovarian follicle growth(GO:0001544)
0.0 0.2 GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401)
0.0 0.1 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.1 GO:0036229 glutamine secretion(GO:0010585) L-glutamine import(GO:0036229) L-glutamine import into cell(GO:1903803)
0.0 0.0 GO:0060671 epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.0 0.1 GO:0016309 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309)
0.0 0.2 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798)
0.0 0.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.0 GO:0004743 pyruvate kinase activity(GO:0004743)
0.0 0.0 GO:0004740 pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740)
0.0 0.1 GO:0022820 potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820)