ENCODE cell lines, expression (Ernst 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Gene Symbol	Gene ID	Gene Info
RARB Links Ensembl NCBI GeneCards UniProt	ENSG00000077092.14	RARB

Gene	Promoter	Pearson corr. coef.	P-value	Plot
RARB	hg19_v2_chr3_+_25469724_25469773	-0.13	6.3e-01	Click!

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Promoter	Score	Transcript	Gene	Gene Info
chr19_-_9731872	2.47	ENST00000424629.1 ENST00000326044.5 ENST00000354661.4 ENST00000435550.1 ENST00000444611.1 ENST00000421525.1	ZNF561	zinc finger protein 561
chr7_+_73623717	2.31	ENST00000344995.5 ENST00000460943.1	LAT2	linker for activation of T cells family, member 2
chr2_-_21266935	2.17	ENST00000233242.1	APOB	apolipoprotein B
chr6_+_24495067	2.05	ENST00000357578.3 ENST00000546278.1 ENST00000491546.1	ALDH5A1	aldehyde dehydrogenase 5 family, member A1
chr17_-_28618948	1.70	ENST00000261714.6	BLMH	bleomycin hydrolase
chr17_-_62097904	1.44	ENST00000583366.1	ICAM2	intercellular adhesion molecule 2
chr7_-_144533074	1.42	ENST00000360057.3 ENST00000378099.3	TPK1	thiamin pyrophosphokinase 1
chr7_+_73624327	1.26	ENST00000361082.3 ENST00000275635.7 ENST00000470709.1	LAT2	linker for activation of T cells family, member 2
chr2_-_175499294	1.22	ENST00000392547.2	WIPF1	WAS/WASL interacting protein family, member 1
chr17_+_58677539	1.18	ENST00000305921.3	PPM1D	protein phosphatase, Mg2+/Mn2+ dependent, 1D
chr11_-_63381823	1.14	ENST00000323646.5	PLA2G16	phospholipase A2, group XVI
chr11_-_116708302	1.07	ENST00000375320.1 ENST00000359492.2 ENST00000375329.2 ENST00000375323.1	APOA1	apolipoprotein A-I
chr11_-_63381925	1.06	ENST00000415826.1	PLA2G16	phospholipase A2, group XVI
chrX_-_70329118	1.04	ENST00000374188.3	IL2RG	interleukin 2 receptor, gamma
chr1_-_111506562	0.95	ENST00000485275.2 ENST00000369763.4	LRIF1	ligand dependent nuclear receptor interacting factor 1
chr11_+_61520075	0.94	ENST00000278836.5	MYRF	myelin regulatory factor
chr15_+_81591757	0.92	ENST00000558332.1	IL16	interleukin 16
chr17_-_26903900	0.90	ENST00000395319.3 ENST00000581807.1 ENST00000584086.1 ENST00000395321.2	ALDOC	aldolase C, fructose-bisphosphate
chr8_-_27462822	0.90	ENST00000522098.1	CLU	clusterin
chr1_+_28206150	0.87	ENST00000456990.1	THEMIS2	thymocyte selection associated family member 2
chr2_+_68592305	0.83	ENST00000234313.7	PLEK	pleckstrin
chr5_+_125935960	0.82	ENST00000297540.4	PHAX	phosphorylated adaptor for RNA export
chr14_+_95078714	0.81	ENST00000393078.3 ENST00000393080.4 ENST00000467132.1	SERPINA3	serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
chr19_-_41256207	0.75	ENST00000598485.2 ENST00000470681.1 ENST00000339153.3 ENST00000598729.1	C19orf54	chromosome 19 open reading frame 54
chr16_-_1993260	0.74	ENST00000361871.3	MSRB1	methionine sulfoxide reductase B1
chr7_-_5998714	0.73	ENST00000539903.1	RSPH10B	radial spoke head 10 homolog B (Chlamydomonas)
chr11_+_308217	0.73	ENST00000602569.1	IFITM2	interferon induced transmembrane protein 2
chr10_-_65028938	0.70	ENST00000402544.1	JMJD1C	jumonji domain containing 1C
chr5_-_133968529	0.70	ENST00000402673.2	SAR1B	SAR1 homolog B (S. cerevisiae)
chr13_-_47012325	0.69	ENST00000409879.2	KIAA0226L	KIAA0226-like
chr10_-_101825151	0.68	ENST00000441382.1	CPN1	carboxypeptidase N, polypeptide 1
chrX_-_119709637	0.66	ENST00000404115.3	CUL4B	cullin 4B
chr4_-_100140331	0.66	ENST00000407820.2 ENST00000394897.1 ENST00000508558.1 ENST00000394899.2	ADH6	alcohol dehydrogenase 6 (class V)
chr2_+_88991162	0.65	ENST00000283646.4	RPIA	ribose 5-phosphate isomerase A
chr19_+_49468558	0.63	ENST00000331825.6	FTL	ferritin, light polypeptide
chr4_+_70146217	0.62	ENST00000335568.5 ENST00000511240.1	UGT2B28	UDP glucuronosyltransferase 2 family, polypeptide B28
chr2_-_97405775	0.62	ENST00000264963.4 ENST00000537039.1 ENST00000377079.4 ENST00000426463.2 ENST00000534882.1	LMAN2L	lectin, mannose-binding 2-like
chr6_-_31763721	0.62	ENST00000375663.3	VARS	valyl-tRNA synthetase
chr11_+_63870660	0.61	ENST00000246841.3	FLRT1	fibronectin leucine rich transmembrane protein 1
chr18_+_657578	0.61	ENST00000323274.10	TYMS	thymidylate synthetase
chr1_-_160313025	0.61	ENST00000368069.3 ENST00000241704.7	COPA	coatomer protein complex, subunit alpha
chr4_+_124317940	0.61	ENST00000505319.1 ENST00000339241.1	SPRY1	sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr11_+_95523621	0.60	ENST00000325542.5 ENST00000325486.5 ENST00000544522.1 ENST00000541365.1	CEP57	centrosomal protein 57kDa
chr6_+_49431073	0.59	ENST00000335783.3	CENPQ	centromere protein Q
chr19_+_50919056	0.59	ENST00000599632.1	CTD-2545M3.6	CTD-2545M3.6
chr8_+_74903580	0.59	ENST00000284818.2 ENST00000518893.1	LY96	lymphocyte antigen 96
chr1_+_248020481	0.57	ENST00000366481.3	TRIM58	tripartite motif containing 58
chr10_-_65028817	0.56	ENST00000542921.1	JMJD1C	jumonji domain containing 1C
chr3_+_127317066	0.55	ENST00000265056.7	MCM2	minichromosome maintenance complex component 2
chr1_-_15850676	0.52	ENST00000440484.1 ENST00000333868.5	CASP9	caspase 9, apoptosis-related cysteine peptidase
chr12_+_57943781	0.51	ENST00000455537.2 ENST00000286452.5	KIF5A	kinesin family member 5A
chr1_+_10534944	0.49	ENST00000356607.4 ENST00000538836.1 ENST00000491661.2	PEX14	peroxisomal biogenesis factor 14
chr19_+_21688366	0.49	ENST00000358491.4 ENST00000597078.1	ZNF429	zinc finger protein 429
chr22_-_37976082	0.46	ENST00000215886.4	LGALS2	lectin, galactoside-binding, soluble, 2
chr3_+_119316689	0.46	ENST00000273371.4	PLA1A	phospholipase A1 member A
chr13_+_73302047	0.46	ENST00000377814.2 ENST00000377815.3 ENST00000390667.5	BORA	bora, aurora kinase A activator
chr9_+_131217459	0.44	ENST00000497812.2 ENST00000393533.2	ODF2	outer dense fiber of sperm tails 2
chr1_+_17944832	0.44	ENST00000167825.4	ARHGEF10L	Rho guanine nucleotide exchange factor (GEF) 10-like
chr16_+_20462783	0.43	ENST00000574251.1 ENST00000576361.1 ENST00000417235.2 ENST00000573854.1 ENST00000424070.1 ENST00000536134.1 ENST00000219054.6 ENST00000575690.1 ENST00000571894.1	ACSM2A	acyl-CoA synthetase medium-chain family member 2A
chr6_-_31763408	0.42	ENST00000444930.2	VARS	valyl-tRNA synthetase
chr1_+_174669653	0.42	ENST00000325589.5	RABGAP1L	RAB GTPase activating protein 1-like
chr17_+_7155343	0.41	ENST00000573513.1 ENST00000354429.2 ENST00000574255.1 ENST00000396627.2 ENST00000356683.2	ELP5	elongator acetyltransferase complex subunit 5
chr8_+_48873453	0.41	ENST00000523944.1	MCM4	minichromosome maintenance complex component 4
chr14_-_39572345	0.40	ENST00000548032.2 ENST00000556092.1 ENST00000557280.1 ENST00000545328.2 ENST00000553970.1	SEC23A	Sec23 homolog A (S. cerevisiae)
chr16_-_20587599	0.40	ENST00000566384.1 ENST00000565232.1 ENST00000567001.1 ENST00000565322.1 ENST00000569344.1 ENST00000329697.6 ENST00000414188.2 ENST00000568882.1	ACSM2B	acyl-CoA synthetase medium-chain family member 2B
chr21_-_35284635	0.40	ENST00000429238.1	AP000304.12	AP000304.12
chr10_+_11784360	0.39	ENST00000379215.4 ENST00000420401.1	ECHDC3	enoyl CoA hydratase domain containing 3
chr20_-_32262165	0.39	ENST00000606690.1 ENST00000246190.6 ENST00000439478.1 ENST00000375238.4	NECAB3	N-terminal EF-hand calcium binding protein 3
chr19_+_35849723	0.38	ENST00000594310.1	FFAR3	free fatty acid receptor 3
chr6_+_31554962	0.37	ENST00000376092.3 ENST00000376086.3 ENST00000303757.8 ENST00000376093.2 ENST00000376102.3	LST1	leukocyte specific transcript 1
chr18_-_7117813	0.37	ENST00000389658.3	LAMA1	laminin, alpha 1
chr7_-_74489609	0.36	ENST00000329959.4 ENST00000503250.2 ENST00000543840.1	WBSCR16	Williams-Beuren syndrome chromosome region 16
chrX_+_129535937	0.34	ENST00000305536.6 ENST00000370947.1	RBMX2	RNA binding motif protein, X-linked 2
chr6_+_24495185	0.33	ENST00000348925.2	ALDH5A1	aldehyde dehydrogenase 5 family, member A1
chr7_-_123198284	0.33	ENST00000355749.2	NDUFA5	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
chr1_+_66258846	0.32	ENST00000341517.4	PDE4B	phosphodiesterase 4B, cAMP-specific
chr20_-_3185279	0.32	ENST00000354488.3 ENST00000380201.2	DDRGK1	DDRGK domain containing 1
chr3_+_119316721	0.31	ENST00000488919.1 ENST00000495992.1	PLA1A	phospholipase A1 member A
chr22_-_31063782	0.30	ENST00000404885.1 ENST00000403268.1 ENST00000407308.1 ENST00000342474.4 ENST00000334679.3	DUSP18	dual specificity phosphatase 18
chr17_+_41363854	0.30	ENST00000588693.1 ENST00000588659.1 ENST00000541594.1 ENST00000536052.1 ENST00000331615.3	TMEM106A	transmembrane protein 106A
chr7_-_6098770	0.29	ENST00000536084.1 ENST00000446699.1 ENST00000199389.6	EIF2AK1	eukaryotic translation initiation factor 2-alpha kinase 1
chr11_-_506316	0.28	ENST00000532055.1 ENST00000531540.1	RNH1	ribonuclease/angiogenin inhibitor 1
chr6_-_52149475	0.28	ENST00000419835.2 ENST00000229854.7 ENST00000596288.1	MCM3	minichromosome maintenance complex component 3
chrX_-_107975917	0.28	ENST00000563887.1	RP6-24A23.6	Uncharacterized protein
chr11_-_47788847	0.27	ENST00000263773.5	FNBP4	formin binding protein 4
chr5_-_147211190	0.27	ENST00000510027.2	SPINK1	serine peptidase inhibitor, Kazal type 1
chr19_-_54618650	0.27	ENST00000391757.1	TFPT	TCF3 (E2A) fusion partner (in childhood Leukemia)
chr11_-_1587166	0.26	ENST00000331588.4	DUSP8	dual specificity phosphatase 8
chr12_-_6716569	0.26	ENST00000544040.1 ENST00000545942.1	CHD4	chromodomain helicase DNA binding protein 4
chr14_-_24658053	0.26	ENST00000354464.6	IPO4	importin 4
chr6_-_49430886	0.26	ENST00000274813.3	MUT	methylmalonyl CoA mutase
chr6_+_31554779	0.25	ENST00000376090.2	LST1	leukocyte specific transcript 1
chr12_+_57810198	0.25	ENST00000598001.1	AC126614.1	HCG1818482; Uncharacterized protein
chr8_-_95274536	0.24	ENST00000297596.2 ENST00000396194.2	GEM	GTP binding protein overexpressed in skeletal muscle
chr17_-_41277317	0.23	ENST00000497488.1 ENST00000489037.1 ENST00000470026.1 ENST00000586385.1 ENST00000591534.1 ENST00000591849.1	BRCA1	breast cancer 1, early onset
chr17_-_41277370	0.23	ENST00000476777.1 ENST00000491747.2 ENST00000478531.1 ENST00000477152.1 ENST00000357654.3 ENST00000493795.1 ENST00000493919.1	BRCA1	breast cancer 1, early onset
chr5_+_53751445	0.23	ENST00000302005.1	HSPB3	heat shock 27kDa protein 3
chr6_-_24667180	0.23	ENST00000545995.1	TDP2	tyrosyl-DNA phosphodiesterase 2
chr12_+_6881678	0.23	ENST00000441671.2 ENST00000203629.2	LAG3	lymphocyte-activation gene 3
chr11_+_118938485	0.23	ENST00000300793.6	VPS11	vacuolar protein sorting 11 homolog (S. cerevisiae)
chr7_+_99425633	0.23	ENST00000354829.2 ENST00000421837.2 ENST00000417625.1 ENST00000342499.4 ENST00000444905.1 ENST00000415413.1 ENST00000312017.5 ENST00000222382.5	CYP3A43	cytochrome P450, family 3, subfamily A, polypeptide 43
chr19_-_33360647	0.23	ENST00000590341.1 ENST00000587772.1 ENST00000023064.4	SLC7A9	solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
chr6_-_24667232	0.23	ENST00000378198.4	TDP2	tyrosyl-DNA phosphodiesterase 2
chr17_+_35767301	0.22	ENST00000225396.6 ENST00000417170.1 ENST00000590005.1 ENST00000590957.1	TADA2A	transcriptional adaptor 2A
chr11_+_31531291	0.22	ENST00000350638.5 ENST00000379163.5 ENST00000395934.2	ELP4	elongator acetyltransferase complex subunit 4
chr5_+_446253	0.21	ENST00000315013.5	EXOC3	exocyst complex component 3
chr9_-_125590818	0.21	ENST00000259467.4	PDCL	phosducin-like
chr19_+_21324827	0.21	ENST00000600692.1 ENST00000599296.1 ENST00000594425.1 ENST00000311048.7	ZNF431	zinc finger protein 431
chr6_+_76311568	0.20	ENST00000370014.3	SENP6	SUMO1/sentrin specific peptidase 6
chr4_+_128802016	0.20	ENST00000270861.5 ENST00000515069.1 ENST00000513090.1 ENST00000507249.1	PLK4	polo-like kinase 4
chr6_-_35480705	0.20	ENST00000229771.6	TULP1	tubby like protein 1
chr17_-_44657017	0.20	ENST00000573185.1 ENST00000570550.1 ENST00000445552.2 ENST00000336125.5 ENST00000329240.4 ENST00000337845.7	ARL17A	ADP-ribosylation factor-like 17A
chr19_+_35862192	0.20	ENST00000597214.1	GPR42	G protein-coupled receptor 42 (gene/pseudogene)
chr2_+_108443388	0.19	ENST00000354986.4 ENST00000408999.3	RGPD4	RANBP2-like and GRIP domain containing 4
chr4_-_48082192	0.18	ENST00000507351.1	TXK	TXK tyrosine kinase
chr6_+_42141029	0.17	ENST00000372958.1	GUCA1A	guanylate cyclase activator 1A (retina)
chr18_-_32924372	0.16	ENST00000261332.6 ENST00000399061.3	ZNF24	zinc finger protein 24
chr1_+_16330723	0.16	ENST00000329454.2	C1orf64	chromosome 1 open reading frame 64
chr19_+_44507091	0.15	ENST00000429154.2 ENST00000585632.1	ZNF230	zinc finger protein 230
chr6_+_76311736	0.15	ENST00000447266.2	SENP6	SUMO1/sentrin specific peptidase 6
chr11_+_65029233	0.15	ENST00000265465.3	POLA2	polymerase (DNA directed), alpha 2, accessory subunit
chr16_-_1275257	0.15	ENST00000234798.4	TPSG1	tryptase gamma 1
chr19_+_35861831	0.14	ENST00000454971.1	GPR42	G protein-coupled receptor 42 (gene/pseudogene)
chr3_+_185304059	0.14	ENST00000427465.2	SENP2	SUMO1/sentrin/SMT3 specific peptidase 2
chr10_-_103599591	0.14	ENST00000348850.5	KCNIP2	Kv channel interacting protein 2
chr9_-_100459639	0.14	ENST00000375128.4	XPA	xeroderma pigmentosum, complementation group A
chr1_+_59775752	0.14	ENST00000371212.1	FGGY	FGGY carbohydrate kinase domain containing
chr17_+_28884130	0.13	ENST00000580161.1	TBC1D29	TBC1 domain family, member 29
chr4_-_84406218	0.13	ENST00000515303.1	FAM175A	family with sequence similarity 175, member A
chr2_-_107084826	0.13	ENST00000304514.7 ENST00000409886.3	RGPD3	RANBP2-like and GRIP domain containing 3
chr6_-_33771757	0.12	ENST00000507738.1 ENST00000266003.5 ENST00000430124.2	MLN	motilin
chr16_+_70380732	0.11	ENST00000302243.7	DDX19A	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
chr1_-_79472365	0.11	ENST00000370742.3	ELTD1	EGF, latrophilin and seven transmembrane domain containing 1
chrX_-_134429952	0.11	ENST00000370764.1	ZNF75D	zinc finger protein 75D
chr15_-_74504597	0.11	ENST00000416286.3	STRA6	stimulated by retinoic acid 6
chr16_+_56995854	0.11	ENST00000566128.1	CETP	cholesteryl ester transfer protein, plasma
chr8_+_67624653	0.11	ENST00000521198.2	SGK3	serum/glucocorticoid regulated kinase family, member 3
chr6_-_28367510	0.11	ENST00000361028.1	ZSCAN12	zinc finger and SCAN domain containing 12
chr2_-_176866978	0.10	ENST00000392540.2 ENST00000409660.1 ENST00000544803.1 ENST00000272748.4	KIAA1715	KIAA1715
chr9_+_130186653	0.10	ENST00000342483.5 ENST00000543471.1	ZNF79	zinc finger protein 79
chr10_-_27389320	0.09	ENST00000436985.2	ANKRD26	ankyrin repeat domain 26
chr17_+_26800648	0.09	ENST00000545060.1	SLC13A2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
chr19_+_39881951	0.08	ENST00000315588.5 ENST00000594368.1 ENST00000599213.2 ENST00000596297.1	MED29	mediator complex subunit 29
chr1_+_12834984	0.08	ENST00000357726.4	PRAMEF12	PRAME family member 12
chr7_+_20686946	0.08	ENST00000443026.2 ENST00000406935.1	ABCB5	ATP-binding cassette, sub-family B (MDR/TAP), member 5
chr11_+_111782934	0.08	ENST00000304298.3	HSPB2	Homo sapiens heat shock 27kDa protein 2 (HSPB2), mRNA.
chr11_-_89653576	0.08	ENST00000420869.1	TRIM49D1	tripartite motif containing 49D1
chr1_+_221051699	0.08	ENST00000366903.6	HLX	H2.0-like homeobox
chr22_+_21336267	0.08	ENST00000215739.8	LZTR1	leucine-zipper-like transcription regulator 1
chr2_-_152830441	0.08	ENST00000534999.1 ENST00000397327.2	CACNB4	calcium channel, voltage-dependent, beta 4 subunit
chrX_+_73164149	0.08	ENST00000602938.1 ENST00000602294.1 ENST00000602920.1 ENST00000602737.1 ENST00000602772.1	JPX	JPX transcript, XIST activator (non-protein coding)
chr12_-_52761262	0.08	ENST00000257901.3	KRT85	keratin 85
chr7_+_73624276	0.07	ENST00000475494.1 ENST00000398475.1	LAT2	linker for activation of T cells family, member 2
chr17_+_26800756	0.07	ENST00000537681.1	SLC13A2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
chr12_-_323689	0.07	ENST00000428720.1	SLC6A12	solute carrier family 6 (neurotransmitter transporter), member 12
chr7_-_99381798	0.07	ENST00000415003.1 ENST00000354593.2	CYP3A4	cytochrome P450, family 3, subfamily A, polypeptide 4
chr1_+_78245303	0.07	ENST00000370791.3 ENST00000443751.2	FAM73A	family with sequence similarity 73, member A
chr8_-_141774467	0.06	ENST00000520151.1 ENST00000519024.1 ENST00000519465.1	PTK2	protein tyrosine kinase 2
chr17_+_48046538	0.05	ENST00000240306.3	DLX4	distal-less homeobox 4
chr12_-_81763184	0.05	ENST00000548670.1 ENST00000541570.2 ENST00000553058.1	PPFIA2	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr6_+_31637944	0.05	ENST00000375864.4	LY6G5B	lymphocyte antigen 6 complex, locus G5B
chr16_+_2255841	0.05	ENST00000301725.7	MLST8	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr1_+_53392901	0.05	ENST00000371514.3 ENST00000528311.1 ENST00000371509.4 ENST00000407246.2 ENST00000371513.5	SCP2	sterol carrier protein 2
chr1_-_110950255	0.04	ENST00000483260.1 ENST00000474861.2 ENST00000602318.1	LAMTOR5	late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
chr1_-_110950564	0.04	ENST00000256644.4	LAMTOR5	late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
chr3_+_49297518	0.04	ENST00000440528.3	RP11-3B7.1	Uncharacterized protein
chr5_+_147774275	0.04	ENST00000513826.1	FBXO38	F-box protein 38
chr1_-_23521222	0.04	ENST00000374619.1	HTR1D	5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
chr3_+_184058125	0.04	ENST00000310585.4	FAM131A	family with sequence similarity 131, member A
chr2_+_11679963	0.04	ENST00000263834.5	GREB1	growth regulation by estrogen in breast cancer 1
chr13_+_28519343	0.03	ENST00000381026.3	ATP5EP2	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
chr2_-_136594740	0.03	ENST00000264162.2	LCT	lactase
chr16_-_4852915	0.03	ENST00000322048.7	ROGDI	rogdi homolog (Drosophila)
chr19_+_6361440	0.03	ENST00000245816.4	CLPP	caseinolytic mitochondrial matrix peptidase proteolytic subunit
chr2_+_177025619	0.02	ENST00000410016.1	HOXD3	homeobox D3
chr6_+_24667257	0.02	ENST00000537591.1 ENST00000230048.4	ACOT13	acyl-CoA thioesterase 13
chr18_-_19283649	0.02	ENST00000584464.1 ENST00000578270.1	ABHD3	abhydrolase domain containing 3
chr1_+_9005917	0.02	ENST00000549778.1 ENST00000480186.3 ENST00000377443.2 ENST00000377436.3 ENST00000377442.2	CA6	carbonic anhydrase VI
chr19_-_23869999	0.01	ENST00000601935.1 ENST00000359788.4 ENST00000600313.1 ENST00000596211.1 ENST00000599168.1	ZNF675	zinc finger protein 675
chr4_+_8594364	0.01	ENST00000360986.4	CPZ	carboxypeptidase Z
chr12_+_104682496	0.01	ENST00000378070.4	TXNRD1	thioredoxin reductase 1
chr1_+_52682052	0.01	ENST00000371591.1	ZFYVE9	zinc finger, FYVE domain containing 9
chr1_-_3713042	0.01	ENST00000378251.1	LRRC47	leucine rich repeat containing 47
chr8_+_24241969	0.01	ENST00000522298.1	ADAMDEC1	ADAM-like, decysin 1
chr1_-_23520755	0.01	ENST00000314113.3	HTR1D	5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
chr7_-_99381884	0.01	ENST00000336411.2	CYP3A4	cytochrome P450, family 3, subfamily A, polypeptide 4
chr2_-_152830479	0.01	ENST00000360283.6	CACNB4	calcium channel, voltage-dependent, beta 4 subunit
chr20_-_43729750	0.00	ENST00000537075.1 ENST00000306117.1	KCNS1	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
chr16_+_2255710	0.00	ENST00000397124.1 ENST00000565250.1	MLST8	MTOR associated protein, LST8 homolog (S. cerevisiae)

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	2.4	GO:0006540	glutamate decarboxylation to succinate(GO:0006540) gamma-aminobutyric acid catabolic process(GO:0009450)
0.4	1.4	GO:0042357	thiamine diphosphate metabolic process(GO:0042357)
0.3	1.0	GO:0006438	valyl-tRNA aminoacylation(GO:0006438)
0.3	2.2	GO:0046485	ether lipid metabolic process(GO:0046485)
0.3	2.2	GO:0006642	triglyceride mobilization(GO:0006642) response to selenium ion(GO:0010269)
0.3	1.7	GO:0043418	homocysteine catabolic process(GO:0043418)
0.3	1.1	GO:0010903	negative regulation of very-low-density lipoprotein particle remodeling(GO:0010903)
0.2	0.6	GO:0006014	D-ribose metabolic process(GO:0006014)
0.2	0.8	GO:0006408	snRNA export from nucleus(GO:0006408)
0.2	0.6	GO:0060940	epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.2	1.8	GO:0032286	central nervous system myelin maintenance(GO:0032286)
0.2	0.5	GO:0016561	protein import into peroxisome matrix, translocation(GO:0016561)
0.2	0.5	GO:0070512	regulation of histone H4-K20 methylation(GO:0070510) positive regulation of histone H4-K20 methylation(GO:0070512)
0.2	0.6	GO:0019860	dTTP biosynthetic process(GO:0006235) pyrimidine deoxyribonucleoside triphosphate biosynthetic process(GO:0009212) transformation of host cell by virus(GO:0019087) uracil metabolic process(GO:0019860)
0.1	1.0	GO:0038110	interleukin-2-mediated signaling pathway(GO:0038110)
0.1	0.8	GO:0070560	protein secretion by platelet(GO:0070560)
0.1	0.7	GO:0030070	insulin processing(GO:0030070)
0.1	1.0	GO:0006268	DNA unwinding involved in DNA replication(GO:0006268)
0.1	1.5	GO:0035970	peptidyl-threonine dephosphorylation(GO:0035970)
0.1	0.3	GO:0098937	dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937)
0.1	0.6	GO:0006880	intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1	0.4	GO:0090234	regulation of kinetochore assembly(GO:0090234)
0.1	0.3	GO:0019626	short-chain fatty acid catabolic process(GO:0019626)
0.1	0.6	GO:0032497	detection of lipopolysaccharide(GO:0032497)
0.1	0.7	GO:0030091	protein repair(GO:0030091)
0.1	0.3	GO:1903721	regulation of I-kappaB phosphorylation(GO:1903719) positive regulation of I-kappaB phosphorylation(GO:1903721)
0.1	0.2	GO:1901842	negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1	0.3	GO:0006447	regulation of translational initiation by iron(GO:0006447)
0.1	0.3	GO:0002879	positive regulation of acute inflammatory response to non-antigenic stimulus(GO:0002879)
0.1	0.7	GO:0006069	ethanol oxidation(GO:0006069)
0.1	1.3	GO:0033169	histone H3-K9 demethylation(GO:0033169)
0.1	0.2	GO:0045085	negative regulation of interleukin-2 biosynthetic process(GO:0045085)
0.1	0.8	GO:0070914	UV-damage excision repair(GO:0070914)
0.1	0.2	GO:0008616	queuosine biosynthetic process(GO:0008616) queuosine metabolic process(GO:0046116)
0.1	0.9	GO:0030388	fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0	3.6	GO:0002279	mast cell activation involved in immune response(GO:0002279) mast cell degranulation(GO:0043303)
0.0	0.5	GO:0032025	response to cobalt ion(GO:0032025)
0.0	0.3	GO:0010751	negative regulation of nitric oxide mediated signal transduction(GO:0010751)
0.0	0.8	GO:0030277	maintenance of gastrointestinal epithelium(GO:0030277)
0.0	0.2	GO:0060335	positive regulation of response to interferon-gamma(GO:0060332) positive regulation of interferon-gamma-mediated signaling pathway(GO:0060335)
0.0	0.3	GO:0072553	terminal button organization(GO:0072553)
0.0	0.9	GO:0050930	induction of positive chemotaxis(GO:0050930)
0.0	0.2	GO:0046601	positive regulation of centriole replication(GO:0046601)
0.0	0.4	GO:0036112	medium-chain fatty-acyl-CoA metabolic process(GO:0036112)
0.0	0.8	GO:0036150	phosphatidylserine acyl-chain remodeling(GO:0036150)
0.0	0.2	GO:0015811	L-cystine transport(GO:0015811)
0.0	0.6	GO:0030157	pancreatic juice secretion(GO:0030157)
0.0	0.4	GO:0042984	amyloid precursor protein biosynthetic process(GO:0042983) regulation of amyloid precursor protein biosynthetic process(GO:0042984)
0.0	0.2	GO:0035542	regulation of SNARE complex assembly(GO:0035542)
0.0	0.2	GO:0046604	positive regulation of mitotic centrosome separation(GO:0046604)
0.0	0.3	GO:1901898	negative regulation of relaxation of cardiac muscle(GO:1901898)
0.0	0.3	GO:0006335	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0	0.2	GO:1903546	protein localization to photoreceptor outer segment(GO:1903546)
0.0	0.1	GO:0036378	calcitriol biosynthetic process from calciol(GO:0036378)
0.0	0.1	GO:0016926	protein desumoylation(GO:0016926)
0.0	0.1	GO:0045163	clustering of voltage-gated potassium channels(GO:0045163)
0.0	0.1	GO:0061143	alveolar primary septum development(GO:0061143)
0.0	0.6	GO:0034453	microtubule anchoring(GO:0034453)
0.0	0.6	GO:0061641	CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.0	0.1	GO:0048749	compound eye development(GO:0048749)
0.0	0.4	GO:0090110	cargo loading into COPII-coated vesicle(GO:0090110)
0.0	0.2	GO:0031284	positive regulation of guanylate cyclase activity(GO:0031284)
0.0	0.1	GO:0045629	negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.0	0.5	GO:0090224	regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.0	0.1	GO:0019321	pentose metabolic process(GO:0019321)
0.0	0.1	GO:0055091	phospholipid homeostasis(GO:0055091)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	4.9	PID FCER1 PATHWAY	Fc-epsilon receptor I signaling in mast cells
0.0	2.6	PID HNF3A PATHWAY	FOXA1 transcription factor network
0.0	1.0	ST INTERLEUKIN 4 PATHWAY	Interleukin 4 (IL-4) Pathway
0.0	1.4	PID INTEGRIN2 PATHWAY	Beta2 integrin cell surface interactions
0.0	0.6	PID ARF 3PATHWAY	Arf1 pathway
0.0	0.5	SA CASPASE CASCADE	Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0	0.4	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.0	1.1	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.0	0.5	PID CD40 PATHWAY	CD40/CD40L signaling
0.0	1.2	PID P53 REGULATION PATHWAY	p53 pathway
0.0	0.9	PID PLK1 PATHWAY	PLK1 signaling events
0.0	0.6	PID ATR PATHWAY	ATR signaling pathway
0.0	0.9	PID E2F PATHWAY	E2F transcription factor network

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	3.9	REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT	Genes involved in Chylomicron-mediated lipid transport
0.1	2.2	REACTOME ACYL CHAIN REMODELLING OF PS	Genes involved in Acyl chain remodelling of PS
0.1	0.7	REACTOME ETHANOL OXIDATION	Genes involved in Ethanol oxidation
0.1	1.2	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
0.1	0.6	REACTOME COPI MEDIATED TRANSPORT	Genes involved in COPI Mediated Transport
0.1	1.9	REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION	Genes involved in GABA synthesis, release, reuptake and degradation
0.0	0.6	REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1	Genes involved in IKK complex recruitment mediated by RIP1
0.0	0.5	REACTOME ROLE OF DCC IN REGULATING APOPTOSIS	Genes involved in Role of DCC in regulating apoptosis
0.0	0.7	REACTOME IL 7 SIGNALING	Genes involved in Interleukin-7 signaling
0.0	1.0	REACTOME CYTOSOLIC TRNA AMINOACYLATION	Genes involved in Cytosolic tRNA aminoacylation
0.0	0.6	REACTOME GLUCURONIDATION	Genes involved in Glucuronidation
0.0	0.6	REACTOME G1 S SPECIFIC TRANSCRIPTION	Genes involved in G1/S-Specific Transcription
0.0	0.2	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0	0.5	REACTOME KINESINS	Genes involved in Kinesins
0.0	0.5	REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS	Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0	0.9	REACTOME GLYCOLYSIS	Genes involved in Glycolysis
0.0	1.1	REACTOME METABOLISM OF VITAMINS AND COFACTORS	Genes involved in Metabolism of vitamins and cofactors
0.0	0.6	REACTOME EGFR DOWNREGULATION	Genes involved in EGFR downregulation
0.0	1.9	REACTOME INTEGRIN CELL SURFACE INTERACTIONS	Genes involved in Integrin cell surface interactions
0.0	0.3	REACTOME DARPP 32 EVENTS	Genes involved in DARPP-32 events
0.0	1.7	REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2	Genes involved in Response to elevated platelet cytosolic Ca2+
0.0	0.4	REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC	Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0	0.8	REACTOME METABOLISM OF NON CODING RNA	Genes involved in Metabolism of non-coding RNA
0.0	0.2	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	2.2	GO:0035473	lipase binding(GO:0035473)
0.4	2.2	GO:0052740	1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.4	0.8	GO:0052739	phosphatidylserine 1-acylhydrolase activity(GO:0052739)
0.3	1.0	GO:0004832	valine-tRNA ligase activity(GO:0004832)
0.3	1.0	GO:0004913	interleukin-4 receptor activity(GO:0004913) interleukin-7 receptor activity(GO:0004917)
0.3	1.1	GO:0070653	high-density lipoprotein particle receptor binding(GO:0070653)
0.2	0.7	GO:0033743	peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.2	1.4	GO:0016778	diphosphotransferase activity(GO:0016778)
0.2	0.5	GO:0036317	tyrosyl-RNA phosphodiesterase activity(GO:0036317) 5'-tyrosyl-DNA phosphodiesterase activity(GO:0070260)
0.1	0.5	GO:0016936	galactoside binding(GO:0016936)
0.1	0.7	GO:0004024	alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1	0.3	GO:0004694	eukaryotic translation initiation factor 2alpha kinase activity(GO:0004694)
0.1	0.8	GO:0004321	fatty-acyl-CoA synthase activity(GO:0004321)
0.1	0.9	GO:0004332	fructose-bisphosphate aldolase activity(GO:0004332)
0.1	1.2	GO:0005522	profilin binding(GO:0005522)
0.1	1.3	GO:0032454	histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1	3.7	GO:0042169	SH2 domain binding(GO:0042169)
0.1	0.6	GO:0001875	lipopolysaccharide receptor activity(GO:0001875)
0.1	0.5	GO:0016929	SUMO-specific protease activity(GO:0016929)
0.1	0.2	GO:0042289	MHC class II protein binding(GO:0042289)
0.1	0.2	GO:0015361	low-affinity sodium:dicarboxylate symporter activity(GO:0015361)
0.1	0.9	GO:0051787	misfolded protein binding(GO:0051787)
0.1	0.8	GO:0015643	toxic substance binding(GO:0015643)
0.0	0.5	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0	0.6	GO:0008199	ferric iron binding(GO:0008199)
0.0	0.9	GO:0042609	CD4 receptor binding(GO:0042609)
0.0	2.4	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0	2.3	GO:0004180	carboxypeptidase activity(GO:0004180)
0.0	0.6	GO:1990825	sequence-specific mRNA binding(GO:1990825)
0.0	0.2	GO:0008479	queuine tRNA-ribosyltransferase activity(GO:0008479)
0.0	0.2	GO:0015184	L-cystine transmembrane transporter activity(GO:0015184)
0.0	0.6	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0	0.1	GO:0017129	triglyceride binding(GO:0017129)
0.0	0.2	GO:0008048	calcium sensitive guanylate cyclase activator activity(GO:0008048)
0.0	0.8	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0	0.6	GO:0003688	DNA replication origin binding(GO:0003688)
0.0	0.6	GO:0005537	mannose binding(GO:0005537)
0.0	0.9	GO:0043015	gamma-tubulin binding(GO:0043015)
0.0	1.2	GO:0051019	mitogen-activated protein kinase binding(GO:0051019)
0.0	0.3	GO:0008428	ribonuclease inhibitor activity(GO:0008428)
0.0	0.1	GO:0030343	vitamin D3 25-hydroxylase activity(GO:0030343) vitamin D 25-hydroxylase activity(GO:0070643)
0.0	0.3	GO:0031419	cobalamin binding(GO:0031419)
0.0	0.2	GO:0008607	phosphorylase kinase regulator activity(GO:0008607)
0.0	0.6	GO:0005104	fibroblast growth factor receptor binding(GO:0005104)
0.0	0.9	GO:0042974	retinoic acid receptor binding(GO:0042974)
0.0	0.1	GO:0046923	ER retention sequence binding(GO:0046923)
0.0	0.5	GO:0097200	cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200)
0.0	0.0	GO:0008422	beta-glucosidase activity(GO:0008422)
0.0	0.0	GO:0070538	oleic acid binding(GO:0070538)
0.0	0.7	GO:0004003	ATP-dependent DNA helicase activity(GO:0004003)
0.0	1.3	GO:0003684	damaged DNA binding(GO:0003684)
0.0	0.1	GO:0015562	efflux transmembrane transporter activity(GO:0015562)
0.0	0.1	GO:0015185	gamma-aminobutyric acid:sodium symporter activity(GO:0005332) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.0	0.5	GO:0019894	kinesin binding(GO:0019894)
0.0	0.5	GO:0048487	beta-tubulin binding(GO:0048487)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	3.2	GO:0034363	intermediate-density lipoprotein particle(GO:0034363)
0.2	0.6	GO:0070288	intracellular ferritin complex(GO:0008043) ferritin complex(GO:0070288)
0.1	0.5	GO:0043293	apoptosome(GO:0043293)
0.1	0.4	GO:0005608	laminin-3 complex(GO:0005608)
0.1	0.6	GO:0046696	lipopolysaccharide receptor complex(GO:0046696)
0.1	0.5	GO:0031436	BRCA1-BARD1 complex(GO:0031436)
0.1	3.6	GO:0042629	mast cell granule(GO:0042629)
0.1	1.2	GO:0042555	MCM complex(GO:0042555)
0.1	0.7	GO:0031465	Cul4B-RING E3 ubiquitin ligase complex(GO:0031465)
0.1	0.9	GO:0034366	spherical high-density lipoprotein particle(GO:0034366)
0.1	0.2	GO:0098536	deuterosome(GO:0098536)
0.1	0.4	GO:0001520	outer dense fiber(GO:0001520)
0.1	0.6	GO:0030126	COPI vesicle coat(GO:0030126)
0.1	1.4	GO:0031254	uropod(GO:0001931) cell trailing edge(GO:0031254)
0.1	0.5	GO:0033588	Elongator holoenzyme complex(GO:0033588)
0.1	0.4	GO:0000137	Golgi cis cisterna(GO:0000137)
0.0	0.3	GO:0032311	angiogenin-PRI complex(GO:0032311)
0.0	0.5	GO:0035253	ciliary rootlet(GO:0035253)
0.0	0.0	GO:0045261	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.0	2.7	GO:0005778	peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0	0.2	GO:0005658	alpha DNA polymerase:primase complex(GO:0005658)
0.0	0.8	GO:0002080	acrosomal membrane(GO:0002080)
0.0	0.2	GO:0000125	PCAF complex(GO:0000125)
0.0	0.6	GO:0044298	neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298)
0.0	0.1	GO:0000110	nucleotide-excision repair factor 1 complex(GO:0000110)
0.0	0.4	GO:0030127	COPII vesicle coat(GO:0030127)
0.0	0.2	GO:0030897	HOPS complex(GO:0030897)
0.0	0.1	GO:0071986	Ragulator complex(GO:0071986)
0.0	1.3	GO:0030134	ER to Golgi transport vesicle(GO:0030134)
0.0	0.3	GO:0005686	U2 snRNP(GO:0005686)
0.0	0.1	GO:0034364	high-density lipoprotein particle(GO:0034364)
0.0	0.3	GO:0000930	gamma-tubulin complex(GO:0000930)
0.0	0.3	GO:0031011	Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0	0.8	GO:0015030	Cajal body(GO:0015030)
0.0	0.9	GO:1904724	tertiary granule lumen(GO:1904724)