Project

ENCODE cell lines, expression (Ernst 2011)

Navigation
Downloads

Results for ZKSCAN3

Z-value: 0.44

Motif logo

logo of

Transcription factors associated with ZKSCAN3

Gene Symbol Gene ID Gene Info
ZKSCAN3
ENSG00000189298.9 ZKSCAN3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ZKSCAN3hg19_v2_chr6_+_28317685_283177610.039.1e-01Click!

Activity profile of ZKSCAN3 motif

Sorted Z-values of ZKSCAN3 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of ZKSCAN3

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:

Promoter Score Transcript Gene Gene Info
chr15_-_41624685 0.69 ENST00000560640.1
ENST00000220514.3
 OIP5
 Opa interacting protein 5
chr15_+_41624892 0.65 ENST00000260359.6
ENST00000450318.1
ENST00000450592.2
ENST00000559596.1
ENST00000414849.2
ENST00000560747.1
ENST00000560177.1
 NUSAP1
 nucleolar and spindle associated protein 1
chr12_+_100867486 0.51 ENST00000548884.1
 NR1H4
 nuclear receptor subfamily 1, group H, member 4
chr12_+_100867694 0.46 ENST00000392986.3
ENST00000549996.1
 NR1H4
 nuclear receptor subfamily 1, group H, member 4
chrX_+_23352133 0.43 ENST00000379361.4
 PTCHD1
 patched domain containing 1
chr12_+_109535923 0.43 ENST00000336865.2
 UNG
 uracil-DNA glycosylase
chr12_+_109535373 0.40 ENST00000242576.2
 UNG
 uracil-DNA glycosylase
chr1_+_66258846 0.37 ENST00000341517.4
 PDE4B
 phosphodiesterase 4B, cAMP-specific
chr14_-_106926724 0.35 ENST00000434710.1
 IGHV3-43
 immunoglobulin heavy variable 3-43
chr8_+_123793633 0.23 ENST00000314393.4
 ZHX2
 zinc fingers and homeoboxes 2
chr5_+_65018017 0.23 ENST00000380985.5
ENST00000502464.1
 NLN
 neurolysin (metallopeptidase M3 family)
chr1_+_226250379 0.23 ENST00000366815.3
ENST00000366814.3
 H3F3A
 H3 histone, family 3A
chr1_+_93913665 0.22 ENST00000271234.7
ENST00000370256.4
ENST00000260506.8
 FNBP1L
 formin binding protein 1-like
chr19_-_49258606 0.20 ENST00000310160.3
 FUT1
 fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)
chr1_+_156123359 0.18 ENST00000368284.1
ENST00000368286.2
ENST00000438830.1
 SEMA4A
 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr17_-_60142609 0.18 ENST00000397786.2
 MED13
 mediator complex subunit 13
chr1_+_156123318 0.18 ENST00000368285.3
 SEMA4A
 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr13_-_111567353 0.17 ENST00000310847.4
ENST00000267339.2
ENST00000375758.5
 ANKRD10
 ankyrin repeat domain 10
chr19_+_54372639 0.17 ENST00000391769.2
 MYADM
 myeloid-associated differentiation marker
chr19_+_49258775 0.17 ENST00000593756.1
 FGF21
 fibroblast growth factor 21
chr10_+_21823079 0.16 ENST00000377100.3
ENST00000377072.3
ENST00000446906.2
 MLLT10
 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
chr1_+_93913713 0.15 ENST00000604705.1
ENST00000370253.2
 FNBP1L
 formin binding protein 1-like
chr6_+_32936353 0.15 ENST00000374825.4
 BRD2
 bromodomain containing 2
chr15_+_74610894 0.14 ENST00000558821.1
ENST00000268082.4
 CCDC33
 coiled-coil domain containing 33
chr16_+_2479390 0.13 ENST00000397066.4
 CCNF
 cyclin F
chr18_-_74728998 0.12 ENST00000359645.3
ENST00000397875.3
ENST00000397869.3
ENST00000578193.1
ENST00000578873.1
ENST00000397866.4
ENST00000528160.1
ENST00000527041.1
ENST00000526111.1
ENST00000397865.5
ENST00000382582.3
 MBP
 myelin basic protein
chr10_+_21823243 0.12 ENST00000307729.7
ENST00000377091.2
 MLLT10
 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
chr6_-_35656712 0.11 ENST00000357266.4
ENST00000542713.1
 FKBP5
 FK506 binding protein 5
chr12_-_3982511 0.09 ENST00000427057.2
ENST00000228820.4
 PARP11
 poly (ADP-ribose) polymerase family, member 11
chr5_-_65017921 0.09 ENST00000381007.4
 SGTB
 small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr2_-_175351744 0.09 ENST00000295500.4
ENST00000392552.2
ENST00000392551.2
 GPR155
 G protein-coupled receptor 155
chr11_-_64013288 0.07 ENST00000542235.1
 PPP1R14B
 protein phosphatase 1, regulatory (inhibitor) subunit 14B
chr6_-_31508304 0.06 ENST00000376177.2
 DDX39B
 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
chr1_+_3598871 0.06 ENST00000603362.1
ENST00000604479.1
 TP73
 tumor protein p73
chr1_-_115259337 0.05 ENST00000369535.4
 NRAS
 neuroblastoma RAS viral (v-ras) oncogene homolog
chr12_-_3982548 0.05 ENST00000397096.2
ENST00000447133.3
ENST00000450737.2
 PARP11
 poly (ADP-ribose) polymerase family, member 11
chr22_-_50312052 0.04 ENST00000330817.6
 ALG12
 ALG12, alpha-1,6-mannosyltransferase
chr11_-_67272794 0.03 ENST00000436757.2
ENST00000356404.3
 PITPNM1
 phosphatidylinositol transfer protein, membrane-associated 1
chr14_-_106069247 0.03 ENST00000479229.1
 RP11-731F5.1
 RP11-731F5.1
chr2_+_191745560 0.03 ENST00000338435.4
 GLS
 glutaminase
chr11_+_66610883 0.03 ENST00000309657.3
ENST00000524506.1
 RCE1
 Ras converting CAAX endopeptidase 1
chr1_-_19811132 0.02 ENST00000433834.1
 CAPZB
 capping protein (actin filament) muscle Z-line, beta
chrX_+_153775821 0.01 ENST00000263518.6
ENST00000470142.1
ENST00000393549.2
ENST00000455588.2
ENST00000369602.3
 IKBKG
 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
chr1_-_28415075 0.01 ENST00000373863.3
ENST00000436342.2
ENST00000540618.1
ENST00000545175.1
 EYA3
 eyes absent homolog 3 (Drosophila)
chr12_-_113573495 0.00 ENST00000446861.3
 RASAL1
 RAS protein activator like 1 (GAP1 like)
chr22_+_50312316 0.00 ENST00000328268.4
 CRELD2
 cysteine-rich with EGF-like domains 2

Gene Ontology Analysis

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.0 0.7 REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere
0.0 0.2 REACTOME RNA POL I PROMOTER OPENING Genes involved in RNA Polymerase I Promoter Opening

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:1902122 chenodeoxycholic acid binding(GO:1902122)
0.1 0.8 GO:0097506 uracil DNA N-glycosylase activity(GO:0004844) deaminated base DNA N-glycosylase activity(GO:0097506)
0.0 0.4 GO:0038191 neuropilin binding(GO:0038191)
0.0 0.2 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.4 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.2 GO:0042809 vitamin D receptor binding(GO:0042809)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:2000213 nitrogen catabolite regulation of transcription from RNA polymerase II promoter(GO:0001079) nitrogen catabolite activation of transcription from RNA polymerase II promoter(GO:0001080) regulation of urea metabolic process(GO:0034255) intracellular bile acid receptor signaling pathway(GO:0038185) interleukin-17 secretion(GO:0072615) nitrogen catabolite regulation of transcription(GO:0090293) nitrogen catabolite activation of transcription(GO:0090294) regulation of nitrogen cycle metabolic process(GO:1903314) positive regulation of glutamate metabolic process(GO:2000213) regulation of ammonia assimilation cycle(GO:2001248) positive regulation of ammonia assimilation cycle(GO:2001250)
0.1 0.2 GO:1902809 skeletal muscle fiber differentiation(GO:0098528) regulation of skeletal muscle fiber differentiation(GO:1902809)
0.1 0.8 GO:0045008 depyrimidination(GO:0045008)
0.1 0.2 GO:0060623 regulation of chromosome condensation(GO:0060623)
0.0 0.7 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.2 GO:0090038 negative regulation of protein kinase C signaling(GO:0090038)
0.0 0.2 GO:1904640 response to methionine(GO:1904640)
0.0 0.4 GO:1901898 negative regulation of relaxation of cardiac muscle(GO:1901898)
0.0 0.4 GO:0021794 thalamus development(GO:0021794)
0.0 0.4 GO:0030050 vesicle transport along actin filament(GO:0030050)
0.0 0.1 GO:1904207 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.0 0.7 GO:0031055 chromatin remodeling at centromere(GO:0031055) CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.0 0.2 GO:0042354 fucose catabolic process(GO:0019317) L-fucose metabolic process(GO:0042354) L-fucose catabolic process(GO:0042355)
0.0 0.4 GO:0045063 T-helper 1 cell differentiation(GO:0045063)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0001740 Barr body(GO:0001740)
0.0 0.7 GO:0010369 chromocenter(GO:0010369)
0.0 1.0 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.1 GO:0033269 internode region of axon(GO:0033269)
0.0 0.4 GO:0000930 gamma-tubulin complex(GO:0000930)
0.0 0.7 GO:0005876 spindle microtubule(GO:0005876)