hg18_v1_chr1_+_151456683_151456683	0.728839	MSX1,2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr1_-_188713324_188713393	0.704498	MSX1,2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr7_-_96471544_96471550	0.599145	MSX1,2.p2	AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)
hg18_v1_chr11_-_83071084_83071115	0.54217	MSX1,2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr6_-_52060327_52060381	0.524387	MSX1,2.p2	AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg18_v1_chrX_+_115481774_115481817	0.450787	MSX1,2.p2	AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14
hg18_v1_chr4_-_41579325_41579348	0.448491	MSX1,2.p2	
hg18_v1_chr17_+_65582981_65583070	0.423489	MSX1,2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr2_-_68952006_68952152	0.419408	MSX1,2.p2	BC069080|BMP10|27302|bone morphogenetic protein 10	BC101734|BMP10|27302|bone morphogenetic protein 10	BC105063|BMP10|27302|bone morphogenetic protein 10	AF101441|BMP10|27302|bone morphogenetic protein 10	NM_014482|BMP10|27302|bone morphogenetic protein 10
hg18_v1_chr17_-_30909219_30909222	0.405729	MSX1,2.p2	BC140847|SLFN14|342618|schlafen family member 14	BC157877|SLFN14|342618|schlafen family member 14	BC157879|SLFN14|342618|schlafen family member 14	NM_001129820|SLFN14|342618|schlafen family member 14
hg18_v1_chr7_+_94377145_94377145	0.391687	MSX1,2.p2	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr3_-_127810087_127810087	0.385572	MSX1,2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr12_+_70119785_70119849	0.380388	MSX1,2.p2	AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5	AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5
hg18_v1_chr4_-_159311959_159311984	0.37293	MSX1,2.p2	AL834177|FAM198B|51313|family with sequence similarity 198, member B	AM392540|FAM198B|51313|family with sequence similarity 198, member B	AM392704|FAM198B|51313|family with sequence similarity 198, member B
hg18_v1_chrX_-_11194015_11194044	0.37281	MSX1,2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr9_+_119506428_119506442	0.357623	MSX1,2.p2	AK293068|TLR4|7099|toll-like receptor 4	AK303730|TLR4|7099|toll-like receptor 4
hg18_v1_chr7_+_80069439_80069476	0.353595	MSX1,2.p2	NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)	AK129899|CD36|948|CD36 molecule (thrombospondin receptor)	AK300101|CD36|948|CD36 molecule (thrombospondin receptor)	AK312920|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr3_+_129690735_129690768	0.344822	MSX1,2.p2	
hg18_v1_chr19_-_14030970_14030970	0.334171	MSX1,2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg18_v1_chr4_-_66218777_66218807	0.325654	MSX1,2.p2	AB209375|EPHA5|2044|EPH receptor A5
hg18_v1_chrX_-_15530112_15530198	0.322755	MSX1,2.p2	AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
hg18_v1_chr8_-_30826074_30826149	0.303203	MSX1,2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr5_+_169713458_169713458	0.30132	MSX1,2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg18_v1_chr9_+_119506446_119506571	0.299089	MSX1,2.p2	U93091|TLR4|7099|toll-like receptor 4	BC025294|TLR4|7099|toll-like receptor 4	AK226155|TLR4|7099|toll-like receptor 4	U88880|TLR4|7099|toll-like receptor 4	BC117422|TLR4|7099|toll-like receptor 4	BC143841|TLR4|7099|toll-like receptor 4	AB445638|TLR4|7099|toll-like receptor 4
hg18_v1_chrX_+_115481848_115481883	0.293257	MSX1,2.p2	BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14
hg18_v1_chr11_-_100505667_100505759	0.287958	MSX1,2.p2	AK304853|PGR|5241|progesterone receptor	NM_000926|PGR|5241|progesterone receptor
hg18_v1_chr10_-_51678318_51678375	0.283154	MSX1,2.p2	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg18_v1_chr9_+_1040367_1040374	0.276569	MSX1,2.p2	Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2
hg18_v1_chr3_-_139315011_139315011	0.269922	MSX1,2.p2	AK057406|DZIP1L|199221|DAZ interacting protein 1-like	NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like
hg18_v1_chr3_+_69895310_69895396	0.269807	MSX1,2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr2_+_114916368_114916368	0.268283	MSX1,2.p2	BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr9_-_21472311_21472311	0.267917	MSX1,2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr6_-_46155937_46156043	0.265366	MSX1,2.p2	AY032602|CLIC5|53405|chloride intracellular channel 5	AK097048|CLIC5|53405|chloride intracellular channel 5	NM_001114086|CLIC5|53405|chloride intracellular channel 5
hg18_v1_chr3_-_115380539_115380673	0.255162	MSX1,2.p2	AY228457|DRD3|1814|dopamine receptor D3	AY228458|DRD3|1814|dopamine receptor D3	NM_000796|DRD3|1814|dopamine receptor D3	NM_033663|DRD3|1814|dopamine receptor D3	AY228454|DRD3|1814|dopamine receptor D3
hg18_v1_chr4_+_77575276_77575276	0.245631	MSX1,2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr12_+_84792203_84792312	0.243877	MSX1,2.p2	AK312066|NTS|4922|neurotensin	BC010918|NTS|4922|neurotensin	NM_006183|NTS|4922|neurotensin	AF157682|NTS|4922|neurotensin	U91618|NTS|4922|neurotensin	CR541936|NTS|4922|neurotensin
hg18_v1_chr1_-_150328153_150328163	0.233991	MSX1,2.p2	BC137493|TCHHL1|126637|trichohyalin-like 1	AY456639|TCHHL1|126637|trichohyalin-like 1	NM_001008536|TCHHL1|126637|trichohyalin-like 1
hg18_v1_chr10_+_124020810_124020829	0.229886	MSX1,2.p2	AK058088|BTBD16|118663|BTB (POZ) domain containing 16	NM_144587|BTBD16|118663|BTB (POZ) domain containing 16	BC109261|BTBD16|118663|BTB (POZ) domain containing 16	BC109262|BTBD16|118663|BTB (POZ) domain containing 16
hg18_v1_chr9_+_18464138_18464228	0.22166	MSX1,2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chrX_+_99726445_99726670	0.220875	MSX1,2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg18_v1_chr6_+_127940011_127940011	0.214259	MSX1,2.p2	AK303850|C6orf58|352999|chromosome 6 open reading frame 58	BC062712|C6orf58|352999|chromosome 6 open reading frame 58	NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58
hg18_v1_chr9_+_1040333_1040356	0.21186	MSX1,2.p2	BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2	NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2	BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2	NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2	AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2	AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2
hg18_v1_chr9_+_134843918_134843918	0.209254	MSX1,2.p2	AY428733|GFI1B|8328|growth factor independent 1B transcription repressor	NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor	NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor
hg18_v1_chrX_-_133620103_133620178	0.20673	MSX1,2.p2	CR618096|PLAC1|10761|placenta-specific 1	CR603619|PLAC1|10761|placenta-specific 1	BC022335|PLAC1|10761|placenta-specific 1	AF234654|PLAC1|10761|placenta-specific 1	BC066327|PLAC1|10761|placenta-specific 1	AK075086|PLAC1|10761|placenta-specific 1	NM_021796|PLAC1|10761|placenta-specific 1
hg18_v1_chr8_-_27171814_27171844	0.199146	MSX1,2.p2	CR591479|STMN4|81551|stathmin-like 4	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg18_v1_chr6_+_154373323_154373328	0.196418	MSX1,2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr5_+_140757787_140757878	0.19545	MSX1,2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr10_-_50269912_50269912	0.194432	MSX1,2.p2	NM_001080520|DRGX|644168|dorsal root ganglia homeobox
hg18_v1_chr3_+_99484421_99484421	0.190313	MSX1,2.p2	NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2
hg18_v1_chrX_-_19598912_19599042	0.19003	MSX1,2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chrX_-_110542040_110542115	0.186425	MSX1,2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr3_+_189425886_189425970	0.184046	MSX1,2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr8_+_24354387_24354566	0.183522	MSX1,2.p2	BC058037|ADAM7|8756|ADAM metallopeptidase domain 7	AK292492|ADAM7|8756|ADAM metallopeptidase domain 7	NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7	AF215824|ADAM7|8756|ADAM metallopeptidase domain 7
hg18_v1_chr16_-_29817841_29818110	0.18253	MSX1,2.p2	EU176661|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	BC000567|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245820|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245821|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245822|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AK293675|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AY358404|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_001114099|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_001114100|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_012410|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_201575|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AK299103|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2
hg18_v1_chr10_+_94823636_94823656	0.179947	MSX1,2.p2	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1
hg18_v1_chr12_+_7039453_7039465	0.178823	MSX1,2.p2	
hg18_v1_chr8_-_27171852_27171897	0.177986	MSX1,2.p2	AK297415|STMN4|81551|stathmin-like 4
hg18_v1_chr1_-_229071957_229071957	0.177169	MSX1,2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr4_+_71096830_71096832	0.173905	MSX1,2.p2	EF113908|ODAM|54959|odontogenic, ameloblast asssociated	NM_017855|ODAM|54959|odontogenic, ameloblast asssociated
hg18_v1_chr2_-_192420168_192420265	0.173784	MSX1,2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr5_-_22248630_22248646	0.169768	MSX1,2.p2	AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr1_+_205344200_205344345	0.167849	MSX1,2.p2	BC022312|C4BPA|722|complement component 4 binding protein, alpha	NM_000715|C4BPA|722|complement component 4 binding protein, alpha	AK303798|C4BPA|722|complement component 4 binding protein, alpha	AK313164|C4BPA|722|complement component 4 binding protein, alpha	M31452|C4BPA|722|complement component 4 binding protein, alpha	AK303793|C4BPA|722|complement component 4 binding protein, alpha
hg18_v1_chrX_+_28515479_28515601	0.161008	MSX1,2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg18_v1_chr5_+_34723420_34723420	0.15875	MSX1,2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg18_v1_chr12_-_112058403_112058426	0.157069	MSX1,2.p2	AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg18_v1_chr21_-_31049566_31049616	0.152559	MSX1,2.p2	NM_181619|KRTAP21-1|337977|keratin associated protein 21-1	AB096960|KRTAP21-1|337977|keratin associated protein 21-1	BC105029|KRTAP21-1|337977|keratin associated protein 21-1	BC105031|KRTAP21-1|337977|keratin associated protein 21-1
hg18_v1_chrX_+_16578201_16578235	0.151687	MSX1,2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg18_v1_chr12_+_887272_887414	0.150816	MSX1,2.p2	BC013629|WNK1|65125|WNK lysine deficient protein kinase 1
hg18_v1_chr5_-_160211623_160211796	0.149145	MSX1,2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chrX_+_128966844_128966931	0.144099	MSX1,2.p2	NM_021946|BCORL1|63035|BCL6 corepressor-like 1	AK074089|BCORL1|63035|BCL6 corepressor-like 1
hg18_v1_chr16_+_55042936_55043020	0.143575	MSX1,2.p2	AK001688|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK022130|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC032919|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	CR615197|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK304584|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AB046832|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg18_v1_chr3_-_71262426_71262435	0.142558	MSX1,2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chrX_+_38096679_38096857	0.139893	MSX1,2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg18_v1_chr9_-_115880281_115880362	0.139642	MSX1,2.p2	CR607981|AMBP|259|alpha-1-microglobulin/bikunin precursor	X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr3_+_52803823_52803855	0.136595	MSX1,2.p2	NM_002217|ITIH3|3699|inter-alpha (globulin) inhibitor H3	X67055|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK222757|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK298450|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107604|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107605|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107814|ITIH3|3699|inter-alpha (globulin) inhibitor H3
hg18_v1_chr3_+_12367993_12368131	0.136157	MSX1,2.p2	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma	U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma	U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma	AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg18_v1_chr4_-_77176163_77176373	0.135707	MSX1,2.p2	BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11	DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11	EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11	Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11	U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11	U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11	AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11	BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11	NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11
hg18_v1_chr2_-_162808123_162808290	0.131002	MSX1,2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chr17_-_25685175_25685202	0.130761	MSX1,2.p2	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1
hg18_v1_chr2_-_165133239_165133262	0.129411	MSX1,2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr17_+_72380323_72380387	0.126548	MSX1,2.p2	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg18_v1_chr7_+_136203938_136203955	0.125668	MSX1,2.p2	AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2	AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2	NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2	NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2	AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2	AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2
hg18_v1_chr2_-_144994349_144994434	0.12341	MSX1,2.p2	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2	AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2
hg18_v1_chr12_-_89922888_89922933	0.122164	MSX1,2.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg18_v1_chr17_-_15109315_15109372	0.121038	MSX1,2.p2	BC091499|PMP22|5376|peripheral myelin protein 22	D11428|PMP22|5376|peripheral myelin protein 22	NM_000304|PMP22|5376|peripheral myelin protein 22
hg18_v1_chr3_+_69895651_69895651	0.119445	MSX1,2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr4_+_89115825_89115843	0.117667	MSX1,2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1	CR602900|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr2_+_102169864_102169897	0.116878	MSX1,2.p2	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2	NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2	U49065|IL1RL2|8808|interleukin 1 receptor-like 2	BC107064|IL1RL2|8808|interleukin 1 receptor-like 2
hg18_v1_chrX_+_66705407_66705407	0.113212	MSX1,2.p2	NM_001011645|AR|367|androgen receptor
hg18_v1_chr4_+_89115892_89115920	0.11175	MSX1,2.p2	AK290104|SPP1|6696|secreted phosphoprotein 1	M83248|SPP1|6696|secreted phosphoprotein 1	AK315461|SPP1|6696|secreted phosphoprotein 1	CR594911|SPP1|6696|secreted phosphoprotein 1	CR614125|SPP1|6696|secreted phosphoprotein 1	CR615073|SPP1|6696|secreted phosphoprotein 1	CR624176|SPP1|6696|secreted phosphoprotein 1	CR590765|SPP1|6696|secreted phosphoprotein 1	CR592228|SPP1|6696|secreted phosphoprotein 1	CR592500|SPP1|6696|secreted phosphoprotein 1	CR593010|SPP1|6696|secreted phosphoprotein 1	CR594618|SPP1|6696|secreted phosphoprotein 1	CR594667|SPP1|6696|secreted phosphoprotein 1	CR595305|SPP1|6696|secreted phosphoprotein 1	CR597759|SPP1|6696|secreted phosphoprotein 1	CR599125|SPP1|6696|secreted phosphoprotein 1	CR600744|SPP1|6696|secreted phosphoprotein 1	CR603247|SPP1|6696|secreted phosphoprotein 1	CR610220|SPP1|6696|secreted phosphoprotein 1	CR610546|SPP1|6696|secreted phosphoprotein 1	CR610609|SPP1|6696|secreted phosphoprotein 1	CR612096|SPP1|6696|secreted phosphoprotein 1	CR616812|SPP1|6696|secreted phosphoprotein 1	CR618220|SPP1|6696|secreted phosphoprotein 1	CR618369|SPP1|6696|secreted phosphoprotein 1	CR619881|SPP1|6696|secreted phosphoprotein 1	CR620974|SPP1|6696|secreted phosphoprotein 1	CR621360|SPP1|6696|secreted phosphoprotein 1	CR621428|SPP1|6696|secreted phosphoprotein 1	CR622075|SPP1|6696|secreted phosphoprotein 1	CR624537|SPP1|6696|secreted phosphoprotein 1	CR624945|SPP1|6696|secreted phosphoprotein 1	CR625643|SPP1|6696|secreted phosphoprotein 1	CR626718|SPP1|6696|secreted phosphoprotein 1	CR624416|SPP1|6696|secreted phosphoprotein 1	CR610252|SPP1|6696|secreted phosphoprotein 1	CR625710|SPP1|6696|secreted phosphoprotein 1	AF052124|SPP1|6696|secreted phosphoprotein 1	CR591902|SPP1|6696|secreted phosphoprotein 1	CR594254|SPP1|6696|secreted phosphoprotein 1	CR594979|SPP1|6696|secreted phosphoprotein 1	CR600714|SPP1|6696|secreted phosphoprotein 1	CR601143|SPP1|6696|secreted phosphoprotein 1	CR602328|SPP1|6696|secreted phosphoprotein 1	CR603218|SPP1|6696|secreted phosphoprotein 1	CR606646|SPP1|6696|secreted phosphoprotein 1	CR610677|SPP1|6696|secreted phosphoprotein 1	CR613156|SPP1|6696|secreted phosphoprotein 1	CR614191|SPP1|6696|secreted phosphoprotein 1	CR615383|SPP1|6696|secreted phosphoprotein 1	CR624157|SPP1|6696|secreted phosphoprotein 1	CR591781|SPP1|6696|secreted phosphoprotein 1	CR605902|SPP1|6696|secreted phosphoprotein 1	CR614122|SPP1|6696|secreted phosphoprotein 1	CR593792|SPP1|6696|secreted phosphoprotein 1	CR596475|SPP1|6696|secreted phosphoprotein 1	CR601537|SPP1|6696|secreted phosphoprotein 1	CR608403|SPP1|6696|secreted phosphoprotein 1	CR613454|SPP1|6696|secreted phosphoprotein 1	CR617515|SPP1|6696|secreted phosphoprotein 1	CR618080|SPP1|6696|secreted phosphoprotein 1	CR619414|SPP1|6696|secreted phosphoprotein 1	CR591447|SPP1|6696|secreted phosphoprotein 1	CR593987|SPP1|6696|secreted phosphoprotein 1	CR596445|SPP1|6696|secreted phosphoprotein 1	CR600682|SPP1|6696|secreted phosphoprotein 1	CR608709|SPP1|6696|secreted phosphoprotein 1	CR609665|SPP1|6696|secreted phosphoprotein 1	CR613613|SPP1|6696|secreted phosphoprotein 1	CR624029|SPP1|6696|secreted phosphoprotein 1	CR625747|SPP1|6696|secreted phosphoprotein 1	CR626471|SPP1|6696|secreted phosphoprotein 1	CR616615|SPP1|6696|secreted phosphoprotein 1	CR607920|SPP1|6696|secreted phosphoprotein 1	CR611180|SPP1|6696|secreted phosphoprotein 1	CR618956|SPP1|6696|secreted phosphoprotein 1	CR623036|SPP1|6696|secreted phosphoprotein 1	CR613121|SPP1|6696|secreted phosphoprotein 1	CR591466|SPP1|6696|secreted phosphoprotein 1	CR600336|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr19_-_6621078_6621170	0.109514	MSX1,2.p2	CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14
hg18_v1_chr9_-_115880372_115880408	0.108042	MSX1,2.p2	X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor	AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr4_-_157006827_157006874	0.107815	MSX1,2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr4_+_89115862_89115890	0.10712	MSX1,2.p2	CR621274|SPP1|6696|secreted phosphoprotein 1	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr3_+_68136056_68136143	0.105333	MSX1,2.p2	AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
hg18_v1_chr6_+_132901119_132901121	0.105219	MSX1,2.p2	BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)
hg18_v1_chr20_+_71230_71275	0.10447	MSX1,2.p2	AK225987|DEFB126|81623|defensin, beta 126	AJ236910|DEFB126|81623|defensin, beta 126	BC069294|DEFB126|81623|defensin, beta 126	NM_030931|DEFB126|81623|defensin, beta 126	AF525928|DEFB126|81623|defensin, beta 126	AY122478|DEFB126|81623|defensin, beta 126
hg18_v1_chr21_-_18697829_18697843	0.104036	MSX1,2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr11_-_114593838_114593879	0.103799	MSX1,2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr2_+_137464931_137464931	0.102649	MSX1,2.p2	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B
hg18_v1_chr9_+_110664366_110664423	0.100637	MSX1,2.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg18_v1_chr4_+_15038726_15038765	0.100401	MSX1,2.p2	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg18_v1_chr21_+_30724442_30724464	0.0999613	MSX1,2.p2	AB096941|KRTAP13-4|284827|keratin associated protein 13-4	BC131691|KRTAP13-4|284827|keratin associated protein 13-4	NM_181600|KRTAP13-4|284827|keratin associated protein 13-4
hg18_v1_chr2_-_21087435_21087487	0.0995853	MSX1,2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr12_-_9252227_9252232	0.0989223	MSX1,2.p2	BC111756|PZP|5858|pregnancy-zone protein	AK313639|PZP|5858|pregnancy-zone protein	NM_002864|PZP|5858|pregnancy-zone protein	X54380|PZP|5858|pregnancy-zone protein
hg18_v1_chr2_-_192419896_192420071	0.0988707	MSX1,2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chr3_-_139333813_139333918	0.098348	MSX1,2.p2	BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase
hg18_v1_chr12_-_89922875_89922881	0.0972054	MSX1,2.p2	U59111|EPYC|1833|epiphycan
hg18_v1_chr1_+_203106600_203106612	0.0969451	MSX1,2.p2	AK308686|NFASC|23114|neurofascin
hg18_v1_chr20_+_43283423_43283444	0.0968006	MSX1,2.p2	BC005262|SEMG2|6407|semenogelin II	M81652|SEMG2|6407|semenogelin II	NM_003008|SEMG2|6407|semenogelin II	AK312932|SEMG2|6407|semenogelin II	BC056675|SEMG2|6407|semenogelin II	BC070306|SEMG2|6407|semenogelin II
hg18_v1_chr22_+_38296703_38296703	0.0963373	MSX1,2.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg18_v1_chr17_-_15495534_15495691	0.0957083	MSX1,2.p2	BC001564|TRIM16|10626|tripartite motif containing 16	CR457136|TRIM16|10626|tripartite motif containing 16	EU446937|TRIM16|10626|tripartite motif containing 16	AK002035|TRIM16|10626|tripartite motif containing 16	AK314557|TRIM16|10626|tripartite motif containing 16
hg18_v1_chr9_-_115880425_115880491	0.095417	MSX1,2.p2	AK310791|AMBP|259|alpha-1-microglobulin/bikunin precursor	CR615737|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr8_-_114518194_114518417	0.0951376	MSX1,2.p2	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3	AY210419|CSMD3|114788|CUB and Sushi multiple domains 3	BC140003|CSMD3|114788|CUB and Sushi multiple domains 3	AB114604|CSMD3|114788|CUB and Sushi multiple domains 3	NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3	NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3
hg18_v1_chr2_-_210726539_210726633	0.0946327	MSX1,2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr21_-_30836051_30836053	0.0943717	MSX1,2.p2	AB096947|KRTAP19-6|337973|keratin associated protein 19-6	AB096948|KRTAP19-6|337973|keratin associated protein 19-6	NM_181612|KRTAP19-6|337973|keratin associated protein 19-6	BC101813|KRTAP19-6|337973|keratin associated protein 19-6	BC101815|KRTAP19-6|337973|keratin associated protein 19-6
hg18_v1_chr4_-_44348414_44348414	0.0943473	MSX1,2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr5_+_139856688_139856810	0.0943081	MSX1,2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr14_-_104330982_104330982	0.0932546	MSX1,2.p2	BX648205|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_005163|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr11_+_130745580_130745778	0.0925214	MSX1,2.p2	NM_001048209|NTM|50863|neurotrimin	AK315964|NTM|50863|neurotrimin	AK293487|NTM|50863|neurotrimin	AY358331|NTM|50863|neurotrimin
hg18_v1_chr1_-_19058741_19058743	0.0908978	MSX1,2.p2	NM_152232|TAS1R2|80834|taste receptor, type 1, member 2
hg18_v1_chr11_-_40272239_40272239	0.089986	MSX1,2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg18_v1_chrX_+_22927998_22928013	0.0881483	MSX1,2.p2	AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53	NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53	BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53	BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
hg18_v1_chr11_-_10671608_10671704	0.0878116	MSX1,2.p2	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr13_-_34948758_34948835	0.085615	MSX1,2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chr3_-_99236520_99236520	0.0853462	MSX1,2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chrX_-_19898302_19898302	0.0849927	MSX1,2.p2	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr7_+_5609416_5609548	0.0839529	MSX1,2.p2	CR595478|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	CR602051|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr11_+_114054409_114054507	0.0839132	MSX1,2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr1_+_195179533_195179632	0.0824863	MSX1,2.p2	BC022283|CFHR2|3080|complement factor H-related 2	NM_005666|CFHR2|3080|complement factor H-related 2	X64877|CFHR2|3080|complement factor H-related 2	DQ891405|CFHR2|3080|complement factor H-related 2	DQ894582|CFHR2|3080|complement factor H-related 2
hg18_v1_chr17_-_10217046_10217046	0.081509	MSX1,2.p2	AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle	NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle
hg18_v1_chrX_-_131181141_131181224	0.0813923	MSX1,2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr4_+_89115923_89115952	0.0813237	MSX1,2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1	CR617116|SPP1|6696|secreted phosphoprotein 1	CR615698|SPP1|6696|secreted phosphoprotein 1	CR612712|SPP1|6696|secreted phosphoprotein 1	CR604739|SPP1|6696|secreted phosphoprotein 1	CR610632|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr1_+_195123766_195123855	0.0812992	MSX1,2.p2	AK292752|CFHR4|10877|complement factor H-related 4	NM_006684|CFHR4|10877|complement factor H-related 4	X98337|CFHR4|10877|complement factor H-related 4	AJ640130|CFHR4|10877|complement factor H-related 4	BC074957|CFHR4|10877|complement factor H-related 4
hg18_v1_chr12_-_69837831_69837886	0.0809031	MSX1,2.p2	AK223022|TSPAN8|7103|tetraspanin 8	AK313112|TSPAN8|7103|tetraspanin 8
hg18_v1_chr12_+_49634048_49634048	0.0807218	MSX1,2.p2	NM_001109619|HIGD1C|613227|HIG1 hypoxia inducible domain family, member 1C
hg18_v1_chr12_+_52105131_52105136	0.0798885	MSX1,2.p2	CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II
hg18_v1_chr6_+_50894397_50894591	0.0797661	MSX1,2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg18_v1_chr5_+_140698537_140698722	0.0795076	MSX1,2.p2	NM_018915|PCDHGA2|56113|protocadherin gamma subfamily A, 2	NM_032009|PCDHGA2|56113|protocadherin gamma subfamily A, 2	BC093871|PCDHGA2|56113|protocadherin gamma subfamily A, 2	BC104950|PCDHGA2|56113|protocadherin gamma subfamily A, 2	AF152322|PCDHGA2|56113|protocadherin gamma subfamily A, 2	AF152508|PCDHGA2|56113|protocadherin gamma subfamily A, 2
hg18_v1_chr1_-_104040594_104040595	0.0784508	MSX1,2.p2	AK292341|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr13_+_57103789_57103789	0.0783114	MSX1,2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr12_+_53178834_53178834	0.0776562	MSX1,2.p2	AK300783|NCKAP1L|3071|NCK-associated protein 1-like	NM_001184976|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr3_-_71262405_71262422	0.0775703	MSX1,2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr12_+_56114724_56114936	0.0772263	MSX1,2.p2	AK314849|INHBC|3626|inhibin, beta C	BC020693|INHBC|3626|inhibin, beta C	NM_005538|INHBC|3626|inhibin, beta C	BC130324|INHBC|3626|inhibin, beta C	BC130326|INHBC|3626|inhibin, beta C
hg18_v1_chr12_-_44877769_44877868	0.0761333	MSX1,2.p2	CR595454|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chrX_-_24600661_24600899	0.0750624	MSX1,2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr11_-_59140192_59140192	0.0748667	MSX1,2.p2	AF185696|OSBP|5007|oxysterol binding protein	M86917|OSBP|5007|oxysterol binding protein	NM_002556|OSBP|5007|oxysterol binding protein
hg18_v1_chr1_+_150029798_150029978	0.0744918	MSX1,2.p2	
hg18_v1_chr3_+_185377341_185377366	0.0742402	MSX1,2.p2	CR608244|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit
hg18_v1_chr6_-_130578110_130578186	0.0740301	MSX1,2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr15_-_68128924_68129002	0.0733653	MSX1,2.p2	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr6_-_123999640_123999844	0.0732624	MSX1,2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr10_+_68355797_68355845	0.0732376	MSX1,2.p2	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3
hg18_v1_chr4_+_71330797_71330797	0.0728385	MSX1,2.p2	NM_001145006|MUC7|4589|mucin 7, secreted
hg18_v1_chr14_-_93324518_93324518	0.0721078	MSX1,2.p2	AY225516|PRIMA1|145270|proline rich membrane anchor 1	AY225517|PRIMA1|145270|proline rich membrane anchor 1	NM_178013|PRIMA1|145270|proline rich membrane anchor 1
hg18_v1_chr16_-_3025542_3025542	0.0719197	MSX1,2.p2	BC128602|CCDC64B|146439|coiled-coil domain containing 64B	NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B
hg18_v1_chr21_-_30720100_30720114	0.0714725	MSX1,2.p2	BC103965|KRTAP13-3|337960|keratin associated protein 13-3	NM_181622|KRTAP13-3|337960|keratin associated protein 13-3	AB096940|KRTAP13-3|337960|keratin associated protein 13-3
hg18_v1_chr16_-_55042614_55042809	0.0714692	MSX1,2.p2	AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR621599|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR617016|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR616196|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR603883|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg18_v1_chr12_+_54172413_54172413	0.0702963	MSX1,2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr7_+_120415958_120416044	0.0699963	MSX1,2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr11_-_102100833_102100894	0.0693358	MSX1,2.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg18_v1_chr17_-_19592178_19592337	0.0692721	MSX1,2.p2	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1
hg18_v1_chr9_+_18464090_18464103	0.0686317	MSX1,2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr19_-_51109875_51109967	0.0664605	MSX1,2.p2	BC042883|NANOS2|339345|nanos homolog 2 (Drosophila)	NM_001029861|NANOS2|339345|nanos homolog 2 (Drosophila)	BC117484|NANOS2|339345|nanos homolog 2 (Drosophila)	BC117486|NANOS2|339345|nanos homolog 2 (Drosophila)
hg18_v1_chr19_+_6723801_6723815	0.0660619	MSX1,2.p2	
hg18_v1_chrX_+_119621771_119621862	0.0660143	MSX1,2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr2_+_176695658_176695772	0.0656744	MSX1,2.p2	BC044855|HOXD9|3235|homeobox D9	NM_014213|HOXD9|3235|homeobox D9	X59372|HOXD9|3235|homeobox D9
hg18_v1_chr10_+_85944383_85944497	0.0654575	MSX1,2.p2	BC038799|CDHR1|92211|cadherin-related family member 1	NM_001171971|CDHR1|92211|cadherin-related family member 1	NM_033100|CDHR1|92211|cadherin-related family member 1	AB053448|CDHR1|92211|cadherin-related family member 1
hg18_v1_chrX_-_48713194_48713196	0.0651446	MSX1,2.p2	BC045659|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1	NM_004979|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1
hg18_v1_chr14_-_105997732_105997770	0.0647383	MSX1,2.p2	BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg18_v1_chr3_-_188903038_188903038	0.064707	MSX1,2.p2	BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2	NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2
hg18_v1_chr19_+_6723705_6723743	0.0646126	MSX1,2.p2	NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor	AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor	AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor
hg18_v1_chr5_-_36337756_36337767	0.0643591	MSX1,2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr5_-_138238877_138238886	0.0635404	MSX1,2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chrX_+_119621933_119622010	0.0633096	MSX1,2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr12_+_111713931_111713931	0.0619899	MSX1,2.p2	NM_001143854|RPH3A|22895|rabphilin 3A homolog (mouse)	NM_014954|RPH3A|22895|rabphilin 3A homolog (mouse)
hg18_v1_chrX_-_131089552_131089730	0.0612083	MSX1,2.p2	FJ717411|FRMD7|90167|FERM domain containing 7	BC114371|FRMD7|90167|FERM domain containing 7	AK125336|FRMD7|90167|FERM domain containing 7	NM_194277|FRMD7|90167|FERM domain containing 7
hg18_v1_chr12_-_121277972_121278020	0.0605224	MSX1,2.p2	BC046209|DIABLO|56616|diablo homolog (Drosophila)	NM_019887|DIABLO|56616|diablo homolog (Drosophila)	NM_138929|DIABLO|56616|diablo homolog (Drosophila)
hg18_v1_chrX_-_43717864_43717864	0.0597843	MSX1,2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr16_+_55042924_55042934	0.0596377	MSX1,2.p2	NM_018233|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK022752|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg18_v1_chr1_+_31655607_31655634	0.0593841	MSX1,2.p2	NM_001199037|SERINC2|347735|serine incorporator 2	AK298512|SERINC2|347735|serine incorporator 2
hg18_v1_chr3_-_150578148_150578176	0.0586435	MSX1,2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr14_-_106282128_106282517	0.0579057	MSX1,2.p2	AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr3_+_185377430_185377530	0.0576566	MSX1,2.p2	U36188|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	DQ892876|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	DQ895915|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit	BT007308|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit
hg18_v1_chr1_+_66772393_66772552	0.0573662	MSX1,2.p2	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1
hg18_v1_chr1_+_151209751_151209764	0.0570698	MSX1,2.p2	NM_173080|SPRR4|163778|small proline-rich protein 4	BC112170|SPRR4|163778|small proline-rich protein 4	BC112172|SPRR4|163778|small proline-rich protein 4	BC069445|SPRR4|163778|small proline-rich protein 4	BC069549|SPRR4|163778|small proline-rich protein 4
hg18_v1_chr3_-_194579207_194579325	0.0567768	MSX1,2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr22_+_34109095_34109222	0.0567581	MSX1,2.p2	CR609687|HMOX1|3162|heme oxygenase (decycling) 1	CR625992|HMOX1|3162|heme oxygenase (decycling) 1	AF051791|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chrX_+_144716619_144716750	0.0566474	MSX1,2.p2	NM_004709|CXorf1|9142|chromosome X open reading frame 1	Y08902|CXorf1|9142|chromosome X open reading frame 1	BC113600|CXorf1|9142|chromosome X open reading frame 1	BC113604|CXorf1|9142|chromosome X open reading frame 1
hg18_v1_chr6_+_131613196_131613400	0.0565804	MSX1,2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chrX_-_135690699_135690740	0.0561511	MSX1,2.p2	D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg18_v1_chr3_+_46591048_46591048	0.0560807	MSX1,2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg18_v1_chr3_+_101720753_101720778	0.0552822	MSX1,2.p2	BC040355|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr4_+_86918870_86918874	0.0552267	MSX1,2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr10_-_98315090_98315173	0.0551053	MSX1,2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr5_+_15553288_15553310	0.0546796	MSX1,2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr1_-_200182090_200182313	0.0543801	MSX1,2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr11_+_55700669_55700669	0.0543397	MSX1,2.p2	NM_001005492|OR5J2|282775|olfactory receptor, family 5, subfamily J, member 2
hg18_v1_chr12_+_111714096_111714128	0.0536448	MSX1,2.p2	AK316112|RPH3A|22895|rabphilin 3A homolog (mouse)	BC017259|RPH3A|22895|rabphilin 3A homolog (mouse)
hg18_v1_chr8_-_72437020_72437039	0.0536026	MSX1,2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr7_+_143423073_143423133	0.0535938	MSX1,2.p2	BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12	BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12	NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12
hg18_v1_chrX_+_16874651_16875056	0.0533466	MSX1,2.p2	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2	AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2	AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2
hg18_v1_chr5_-_35974493_35974637	0.0530875	MSX1,2.p2	NM_001042625|CAPSL|133690|calcyphosine-like	BC017586|CAPSL|133690|calcyphosine-like	NM_144647|CAPSL|133690|calcyphosine-like
hg18_v1_chr3_+_125586241_125586386	0.0530677	MSX1,2.p2	AK131379|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr12_-_14024187_14024319	0.0523376	MSX1,2.p2	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg18_v1_chr7_+_111850367_111850490	0.0519358	MSX1,2.p2	AK313211|IFRD1|3475|interferon-related developmental regulator 1	NM_001007245|IFRD1|3475|interferon-related developmental regulator 1	NM_001197080|IFRD1|3475|interferon-related developmental regulator 1	AK315967|IFRD1|3475|interferon-related developmental regulator 1	AK308066|IFRD1|3475|interferon-related developmental regulator 1
hg18_v1_chr17_+_36647795_36647804	0.0516453	MSX1,2.p2	NM_031963|KRTAP9-8|83901|keratin associated protein 9-8	BC074981|KRTAP9-8|83901|keratin associated protein 9-8	BC074982|KRTAP9-8|83901|keratin associated protein 9-8
hg18_v1_chr11_-_27637771_27637771	0.0515416	MSX1,2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr10_-_119124727_119125016	0.0512242	MSX1,2.p2	BC012186|PDZD8|118987|PDZ domain containing 8	BC028375|PDZD8|118987|PDZ domain containing 8	NM_173791|PDZD8|118987|PDZ domain containing 8	AK091746|PDZD8|118987|PDZ domain containing 8	BC033019|PDZD8|118987|PDZ domain containing 8
hg18_v1_chr4_-_68793928_68794006	0.050465	MSX1,2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg18_v1_chr3_-_71625318_71625396	0.0500645	MSX1,2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg18_v1_chr8_-_102005697_102005703	0.050023	MSX1,2.p2	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr11_+_56512922_56512964	0.0499435	MSX1,2.p2	BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2	NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2
hg18_v1_chr1_+_118273869_118273884	0.0492804	MSX1,2.p2	BC058836|WDR3|10885|WD repeat domain 3
hg18_v1_chr16_+_31105579_31105626	0.0489819	MSX1,2.p2	
hg18_v1_chr19_+_56956264_56956276	0.0487681	MSX1,2.p2	NM_001005738|FPR2|2358|formyl peptide receptor 2	M88107|FPR2|2358|formyl peptide receptor 2	D10922|FPR2|2358|formyl peptide receptor 2	AK290557|FPR2|2358|formyl peptide receptor 2
hg18_v1_chr2_-_51112743_51112782	0.0485224	MSX1,2.p2	BC046631|NRXN1|9378|neurexin 1
hg18_v1_chr11_-_85146691_85146691	0.0480892	MSX1,2.p2	BC136450|SYTL2|54843|synaptotagmin-like 2	BC144114|SYTL2|54843|synaptotagmin-like 2	BC144115|SYTL2|54843|synaptotagmin-like 2	NM_001162951|SYTL2|54843|synaptotagmin-like 2	NM_001162953|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr10_+_115501202_115501202	0.0480463	MSX1,2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr12_+_53809731_53809819	0.0471341	MSX1,2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr6_-_26038817_26038924	0.0471179	MSX1,2.p2	U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2	NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2
hg18_v1_chr19_+_53016910_53017024	0.0469299	MSX1,2.p2	NM_000554|CRX|1406|cone-rod homeobox	DQ426868|CRX|1406|cone-rod homeobox	BC016664|CRX|1406|cone-rod homeobox	BC053672|CRX|1406|cone-rod homeobox
hg18_v1_chr14_+_100365162_100365302	0.0465	MSX1,2.p2	AF052114|MEG3|55384|maternally expressed 3 (non-protein coding)	CR613369|MEG3|55384|maternally expressed 3 (non-protein coding)
hg18_v1_chrX_+_30171768_30171768	0.046478	MSX1,2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg18_v1_chr11_-_58099884_58099965	0.0461581	MSX1,2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chrX_-_129347101_129347191	0.0458977	MSX1,2.p2	AY288416|GPR119|139760|G protein-coupled receptor 119	BC101166|GPR119|139760|G protein-coupled receptor 119	BC101167|GPR119|139760|G protein-coupled receptor 119	BC101168|GPR119|139760|G protein-coupled receptor 119	BC095502|GPR119|139760|G protein-coupled receptor 119	BC126179|GPR119|139760|G protein-coupled receptor 119	BC126181|GPR119|139760|G protein-coupled receptor 119	NM_178471|GPR119|139760|G protein-coupled receptor 119
hg18_v1_chr8_+_75899326_75899326	0.0457664	MSX1,2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr14_+_22375632_22375648	0.0456578	MSX1,2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr1_+_103999663_103999664	0.0453867	MSX1,2.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr19_-_63177713_63177713	0.0449772	MSX1,2.p2	BC033933|C19orf18|147685|chromosome 19 open reading frame 18	NM_152474|C19orf18|147685|chromosome 19 open reading frame 18
hg18_v1_chr22_-_24107543_24107543	0.0448476	MSX1,2.p2	BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like	NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like
hg18_v1_chr14_-_105796665_105796782	0.044693	MSX1,2.p2	AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31	X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23	AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC015760|IGHM|3507|immunoglobulin heavy constant mu	BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097950|IGHM|3507|immunoglobulin heavy constant mu	AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg18_v1_chr5_-_90645974_90646029	0.0446241	MSX1,2.p2	AK091866|LOC100505994|100505994|hypothetical LOC100505994
hg18_v1_chr12_+_99712504_99712866	0.044219	MSX1,2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg18_v1_chr7_+_143378393_143378427	0.0438141	MSX1,2.p2	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5
hg18_v1_chr10_-_74384485_74384549	0.04338	MSX1,2.p2	AF349540|PLA2G12B|84647|phospholipase A2, group XIIB	BC093996|PLA2G12B|84647|phospholipase A2, group XIIB	BC111946|PLA2G12B|84647|phospholipase A2, group XIIB	BC143532|PLA2G12B|84647|phospholipase A2, group XIIB	AY358032|PLA2G12B|84647|phospholipase A2, group XIIB	NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB	AF339053|PLA2G12B|84647|phospholipase A2, group XIIB	AK313712|PLA2G12B|84647|phospholipase A2, group XIIB
hg18_v1_chr9_+_133295297_133295309	0.043279	MSX1,2.p2	NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr1_+_195055483_195055605	0.042909	MSX1,2.p2	NM_002113|CFHR1|3078|complement factor H-related 1	BC107771|CFHR1|3078|complement factor H-related 1	AK290830|CFHR1|3078|complement factor H-related 1	BC016755|CFHR1|3078|complement factor H-related 1	M65292|CFHR1|3078|complement factor H-related 1	M65293|CFHR1|3078|complement factor H-related 1	X56210|CFHR1|3078|complement factor H-related 1	DQ892762|CFHR1|3078|complement factor H-related 1	DQ896007|CFHR1|3078|complement factor H-related 1	X56209|CFHR1|3078|complement factor H-related 1
hg18_v1_chrX_+_12834659_12834698	0.0425534	MSX1,2.p2	AK314240|TLR8|51311|toll-like receptor 8	NM_138636|TLR8|51311|toll-like receptor 8	AF246971|TLR8|51311|toll-like receptor 8	AY358296|TLR8|51311|toll-like receptor 8	BC101074|TLR8|51311|toll-like receptor 8	BC101075|TLR8|51311|toll-like receptor 8	BC101076|TLR8|51311|toll-like receptor 8	BC101077|TLR8|51311|toll-like receptor 8	AF245703|TLR8|51311|toll-like receptor 8
hg18_v1_chr3_-_101316038_101316046	0.0424706	MSX1,2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr1_-_118273701_118273709	0.0415745	MSX1,2.p2	BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2
hg18_v1_chr11_+_55869996_55870090	0.040856	MSX1,2.p2	BC146844|OR8K1|390157|olfactory receptor, family 8, subfamily K, member 1	NM_001002907|OR8K1|390157|olfactory receptor, family 8, subfamily K, member 1
hg18_v1_chr7_+_141136485_141136630	0.0407906	MSX1,2.p2	BC095522|TAS2R5|54429|taste receptor, type 2, member 5	NM_018980|TAS2R5|54429|taste receptor, type 2, member 5	BC101586|TAS2R5|54429|taste receptor, type 2, member 5	BC101588|TAS2R5|54429|taste receptor, type 2, member 5	BC069509|TAS2R5|54429|taste receptor, type 2, member 5
hg18_v1_chr12_-_11030777_11030777	0.0403161	MSX1,2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr2_-_180135559_180135559	0.0402253	MSX1,2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr2_+_162908828_162908860	0.0397558	MSX1,2.p2	NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein
hg18_v1_chr1_+_180685878_180685914	0.0396051	MSX1,2.p2	NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1	AK302768|RGSL1|353299|regulator of G-protein signaling like 1	BC142944|RGSL1|353299|regulator of G-protein signaling like 1	AL136902|RGSL1|353299|regulator of G-protein signaling like 1
hg18_v1_chr3_-_150578207_150578257	0.0395335	MSX1,2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chrX_-_100920493_100920637	0.0392634	MSX1,2.p2	BC018009|GK|2710|glycerol kinase
hg18_v1_chr12_+_53177789_53177803	0.0391929	MSX1,2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr5_-_137576881_137576923	0.0389599	MSX1,2.p2	AF191341|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	BT009810|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	DQ891686|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	DQ894870|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	BC017713|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	AF053977|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	BC005258|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	BC010944|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	AK291610|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	AB011472|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	AK223250|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)
hg18_v1_chr1_+_54132447_54132471	0.0380419	MSX1,2.p2	AK290780|DIO1|1733|deiodinase, iodothyronine, type I	BC017955|DIO1|1733|deiodinase, iodothyronine, type I	BC107170|DIO1|1733|deiodinase, iodothyronine, type I	BC107171|DIO1|1733|deiodinase, iodothyronine, type I	NM_000792|DIO1|1733|deiodinase, iodothyronine, type I	NM_001039715|DIO1|1733|deiodinase, iodothyronine, type I	NM_001039716|DIO1|1733|deiodinase, iodothyronine, type I	NM_213593|DIO1|1733|deiodinase, iodothyronine, type I	FJ002243|DIO1|1733|deiodinase, iodothyronine, type I	FJ002244|DIO1|1733|deiodinase, iodothyronine, type I	AY560374|DIO1|1733|deiodinase, iodothyronine, type I	AY560375|DIO1|1733|deiodinase, iodothyronine, type I	AY560376|DIO1|1733|deiodinase, iodothyronine, type I	AY560377|DIO1|1733|deiodinase, iodothyronine, type I	AY560378|DIO1|1733|deiodinase, iodothyronine, type I	AY560379|DIO1|1733|deiodinase, iodothyronine, type I	AY560380|DIO1|1733|deiodinase, iodothyronine, type I	AY560381|DIO1|1733|deiodinase, iodothyronine, type I	AY560382|DIO1|1733|deiodinase, iodothyronine, type I	AY560383|DIO1|1733|deiodinase, iodothyronine, type I
hg18_v1_chr5_-_138238891_138238934	0.0378421	MSX1,2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr14_+_100365390_100365443	0.0375242	MSX1,2.p2	CR610233|MEG3|55384|maternally expressed 3 (non-protein coding)	CR609760|MEG3|55384|maternally expressed 3 (non-protein coding)
hg18_v1_chr9_-_115880366_115880371	0.0372398	MSX1,2.p2	AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chrX_+_52129872_52129872	0.0366791	MSX1,2.p2	DQ893147|XAGE2|9502|X antigen family, member 2	DQ896442|XAGE2|9502|X antigen family, member 2	NM_001079538|XAGE2B|728242|X antigen family, member 2B
hg18_v1_chr12_+_79362256_79362256	0.0363685	MSX1,2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr3_+_8518539_8518624	0.0360789	MSX1,2.p2	AK294455|LMCD1|29995|LIM and cysteine-rich domains 1	AK293849|LMCD1|29995|LIM and cysteine-rich domains 1	AF216709|LMCD1|29995|LIM and cysteine-rich domains 1	DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1	DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1
hg18_v1_chr10_-_74384569_74384587	0.0360148	MSX1,2.p2	AK311349|PLA2G12B|84647|phospholipase A2, group XIIB
hg18_v1_chr3_+_120375053_120375156	0.0352224	MSX1,2.p2	AK303924|UPK1B|7348|uroplakin 1B	AK313787|UPK1B|7348|uroplakin 1B	NM_006952|UPK1B|7348|uroplakin 1B	CR624397|UPK1B|7348|uroplakin 1B	AB002155|UPK1B|7348|uroplakin 1B
hg18_v1_chr3_-_188870799_188870894	0.0350262	MSX1,2.p2	BC032625|SST|6750|somatostatin	AK312177|SST|6750|somatostatin	NM_001048|SST|6750|somatostatin
hg18_v1_chr12_-_21545751_21545869	0.0349219	MSX1,2.p2	BC001052|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	AK291627|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_002907|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_032941|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)
hg18_v1_chr22_+_33792125_33792173	0.0345528	MSX1,2.p2	CR749372|ISX|91464|intestine-specific homeobox	AK025181|ISX|91464|intestine-specific homeobox	NM_001008494|ISX|91464|intestine-specific homeobox
hg18_v1_chr17_-_36403910_36403963	0.0334798	MSX1,2.p2	AJ406933|KRTAP3-3|85293|keratin associated protein 3-3	BC069099|KRTAP3-3|85293|keratin associated protein 3-3	BC069448|KRTAP3-3|85293|keratin associated protein 3-3	NM_033185|KRTAP3-3|85293|keratin associated protein 3-3	BC093845|KRTAP3-3|85293|keratin associated protein 3-3	BC093847|KRTAP3-3|85293|keratin associated protein 3-3
hg18_v1_chr6_-_56615544_56615652	0.0333334	MSX1,2.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg18_v1_chr7_+_143437539_143437608	0.033181	MSX1,2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg18_v1_chr1_+_118273887_118273916	0.0331717	MSX1,2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg18_v1_chrX_-_116991728_116991787	0.0327145	MSX1,2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr11_-_64484184_64484184	0.0323967	MSX1,2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg18_v1_chr2_+_102744921_102744973	0.0317985	MSX1,2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr2_+_233633348_233633372	0.0317501	MSX1,2.p2	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa	BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa	BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa
hg18_v1_chr5_+_60969392_60969392	0.0316709	MSX1,2.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr12_+_53177758_53177786	0.0315263	MSX1,2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr12_-_21379098_21379100	0.0312501	MSX1,2.p2	NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2
hg18_v1_chr1_+_226352179_226352387	0.0311004	MSX1,2.p2	CR615857|ARF1|375|ADP-ribosylation factor 1	CR592765|ARF1|375|ADP-ribosylation factor 1	CR626279|ARF1|375|ADP-ribosylation factor 1	BC010415|ARF1|375|ADP-ribosylation factor 1	CR614806|ARF1|375|ADP-ribosylation factor 1
hg18_v1_chr7_+_80145461_80145547	0.031083	MSX1,2.p2	CR604329|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr11_-_72141064_72141164	0.0310086	MSX1,2.p2	AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg18_v1_chr11_+_120478584_120478584	0.0308521	MSX1,2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chr4_-_155753332_155753410	0.0307836	MSX1,2.p2	NM_000509|FGG|2266|fibrinogen gamma chain	NM_021870|FGG|2266|fibrinogen gamma chain
hg18_v1_chr5_-_137576928_137576933	0.0306373	MSX1,2.p2	AK304635|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	NM_004661|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)
hg18_v1_chr6_-_28591542_28591548	0.0303796	MSX1,2.p2	BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)	BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)	AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)	NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)
hg18_v1_chr2_+_98070026_98070130	0.0302313	MSX1,2.p2	NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B	AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B	BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B	AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B	AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B	AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B	BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B	AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B	BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B
hg18_v1_chr15_+_89570333_89570497	0.0299738	MSX1,2.p2	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B	CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B	DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B	EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr15_+_90197884_90198010	0.0299522	MSX1,2.p2	NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1
hg18_v1_chr11_-_13474101_13474142	0.0293441	MSX1,2.p2	V00597|PTH|5741|parathyroid hormone	BC096142|PTH|5741|parathyroid hormone	BC096143|PTH|5741|parathyroid hormone	BC096144|PTH|5741|parathyroid hormone	BC096145|PTH|5741|parathyroid hormone	NM_000315|PTH|5741|parathyroid hormone
hg18_v1_chr3_+_187866464_187866493	0.029267	MSX1,2.p2	AK313381|HRG|3273|histidine-rich glycoprotein	BC069574|HRG|3273|histidine-rich glycoprotein	NM_000412|HRG|3273|histidine-rich glycoprotein	BC150591|HRG|3273|histidine-rich glycoprotein
hg18_v1_chr11_-_6870306_6870405	0.0291916	MSX1,2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr7_+_120416103_120416161	0.0290648	MSX1,2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chrX_-_110541029_110541029	0.0290524	MSX1,2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr1_+_119851348_119851622	0.0283195	MSX1,2.p2	CR622398|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR621102|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR603707|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR613080|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615472|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR614968|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR601599|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR602148|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR611232|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR611960|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR626548|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR593718|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617799|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR594828|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR590386|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR608288|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617775|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR608233|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615908|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR595151|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR600450|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR623220|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR593000|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR625130|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR592878|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR599088|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR601348|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR609339|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR612644|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615721|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR616641|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617417|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR618495|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR606137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR592176|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR597734|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR619906|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
hg18_v1_chr5_+_140714951_140714951	0.028166	MSX1,2.p2	AF152324|PCDHGA4|56111|protocadherin gamma subfamily A, 4	AF152511|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_018917|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_032053|PCDHGA4|56111|protocadherin gamma subfamily A, 4
hg18_v1_chr3_-_121065112_121065117	0.0273976	MSX1,2.p2	
hg18_v1_chr2_-_183095308_183095751	0.0270938	MSX1,2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr1_-_156923111_156923129	0.026944	MSX1,2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chrX_-_74292800_74292856	0.0266677	MSX1,2.p2	AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7
hg18_v1_chr12_-_6354818_6354975	0.0265886	MSX1,2.p2	AY365119|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	X76180|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha
hg18_v1_chr4_+_114190233_114190333	0.0264734	MSX1,2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr19_-_17819773_17819805	0.026374	MSX1,2.p2	BC028068|JAK3|3718|Janus kinase 3
hg18_v1_chr12_-_6354650_6354676	0.0262891	MSX1,2.p2	AK172792|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	NM_001159576|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha
hg18_v1_chr5_+_140790365_140790389	0.0259936	MSX1,2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr12_+_53177806_53177812	0.0259765	MSX1,2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr7_-_92693716_92693722	0.0257777	MSX1,2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg18_v1_chr5_-_35083996_35083996	0.025628	MSX1,2.p2	NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2
hg18_v1_chr17_-_9870292_9870400	0.0253375	MSX1,2.p2	AB007854|GAS7|8522|growth arrest-specific 7	AK225165|GAS7|8522|growth arrest-specific 7	AK299574|GAS7|8522|growth arrest-specific 7	NM_001130831|GAS7|8522|growth arrest-specific 7
hg18_v1_chr19_-_41091023_41091042	0.024884	MSX1,2.p2	AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein	BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein	AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein
hg18_v1_chr17_+_18027538_18027591	0.0246081	MSX1,2.p2	NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)
hg18_v1_chr3_+_129124591_129124593	0.0245341	MSX1,2.p2	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg18_v1_chr6_-_55848317_55848333	0.0241809	MSX1,2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr6_+_33365445_33365527	0.0240475	MSX1,2.p2	BC039033|PFDN6|10471|prefoldin subunit 6	BC059783|PFDN6|10471|prefoldin subunit 6	CR609151|PFDN6|10471|prefoldin subunit 6
hg18_v1_chr14_+_51025604_51025604	0.0237912	MSX1,2.p2	AL833158|FRMD6|122786|FERM domain containing 6	NM_001042481|FRMD6|122786|FERM domain containing 6
hg18_v1_chr1_+_110361634_110361667	0.0237395	MSX1,2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr6_-_55848346_55848351	0.0231882	MSX1,2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr15_-_64644758_64644888	0.0227503	MSX1,2.p2	AY358729|LCTL|197021|lactase-like	NM_207338|LCTL|197021|lactase-like
hg18_v1_chr17_-_4831644_4831708	0.0224575	MSX1,2.p2	AB020716|CAMTA2|23125|calmodulin binding transcription activator 2	BC167148|CAMTA2|23125|calmodulin binding transcription activator 2	BC167149|CAMTA2|23125|calmodulin binding transcription activator 2	BC167151|CAMTA2|23125|calmodulin binding transcription activator 2	BC167160|CAMTA2|23125|calmodulin binding transcription activator 2	EU832136|CAMTA2|23125|calmodulin binding transcription activator 2	EU832229|CAMTA2|23125|calmodulin binding transcription activator 2	AK302528|CAMTA2|23125|calmodulin binding transcription activator 2	AL833974|CAMTA2|23125|calmodulin binding transcription activator 2	BC142695|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2	NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2
hg18_v1_chr10_+_70881322_70881356	0.0223562	MSX1,2.p2	
hg18_v1_chr3_-_150578103_150578142	0.0221614	MSX1,2.p2	CR617959|TM4SF1|4071|transmembrane 4 L six family member 1	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr3_-_87408301_87408426	0.0220354	MSX1,2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr1_+_246468853_246468853	0.0218855	MSX1,2.p2	NM_017504|OR2M4|26245|olfactory receptor, family 2, subfamily M, member 4
hg18_v1_chr4_+_71372422_71372527	0.0215598	MSX1,2.p2	NM_152291|MUC7|4589|mucin 7, secreted	AK093828|MUC7|4589|mucin 7, secreted	AK312855|MUC7|4589|mucin 7, secreted	BX647190|MUC7|4589|mucin 7, secreted	BC025688|MUC7|4589|mucin 7, secreted	L13283|MUC7|4589|mucin 7, secreted
hg18_v1_chr1_-_145163520_145163618	0.0213699	MSX1,2.p2	BC035687|FMO5|2330|flavin containing monooxygenase 5	L37080|FMO5|2330|flavin containing monooxygenase 5	Z47553|FMO5|2330|flavin containing monooxygenase 5	BC020872|FMO5|2330|flavin containing monooxygenase 5	AK222728|FMO5|2330|flavin containing monooxygenase 5	AK225739|FMO5|2330|flavin containing monooxygenase 5
hg18_v1_chr3_+_161877640_161877658	0.0211988	MSX1,2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg18_v1_chrX_-_62891730_62891755	0.0210918	MSX1,2.p2	NM_001173480|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	NM_015185|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg18_v1_chr6_-_49862858_49863011	0.020801	MSX1,2.p2	BC038843|PGK2|5232|phosphoglycerate kinase 2	AK312770|PGK2|5232|phosphoglycerate kinase 2	NM_138733|PGK2|5232|phosphoglycerate kinase 2
hg18_v1_chr1_+_151596953_151596972	0.0201298	MSX1,2.p2	AK311882|S100A9|6280|S100 calcium binding protein A9	NM_002965|S100A9|6280|S100 calcium binding protein A9	X06233|S100A9|6280|S100 calcium binding protein A9	BC047681|S100A9|6280|S100 calcium binding protein A9	AF086362|S100A9|6280|S100 calcium binding protein A9
hg18_v1_chr15_-_38185865_38185940	0.019883	MSX1,2.p2	BC104983|BMF|90427|Bcl2 modifying factor	BC104985|BMF|90427|Bcl2 modifying factor	BC069328|BMF|90427|Bcl2 modifying factor	BC069505|BMF|90427|Bcl2 modifying factor	NM_033503|BMF|90427|Bcl2 modifying factor	AK024472|BMF|90427|Bcl2 modifying factor
hg18_v1_chr1_+_200246312_200246351	0.0194514	MSX1,2.p2	NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR609083|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg18_v1_chr5_-_138238953_138238963	0.0192754	MSX1,2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr9_-_115880494_115880576	0.0191474	MSX1,2.p2	AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor	BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor	NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr3_+_45042754_45042858	0.0191153	MSX1,2.p2	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B	NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B	X64559|CLEC3B|7123|C-type lectin domain family 3, member B	BC011024|CLEC3B|7123|C-type lectin domain family 3, member B	CR595857|CLEC3B|7123|C-type lectin domain family 3, member B	CR541981|CLEC3B|7123|C-type lectin domain family 3, member B	CR542009|CLEC3B|7123|C-type lectin domain family 3, member B
hg18_v1_chr11_-_8636958_8636958	0.0187267	MSX1,2.p2	AB002296|TRIM66|9866|tripartite motif containing 66	NM_014818|TRIM66|9866|tripartite motif containing 66
hg18_v1_chr3_-_52269467_52269508	0.0185625	MSX1,2.p2	BC018941|WDR82|80335|WD repeat domain 82	AK074290|WDR82|80335|WD repeat domain 82
hg18_v1_chr10_+_95507555_95507717	0.0183698	MSX1,2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	CR621199|LGI1|9211|leucine-rich, glioma inactivated 1	CR621328|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg18_v1_chr1_-_167969802_167969845	0.018229	MSX1,2.p2	BC131551|SELE|6401|selectin E	M24736|SELE|6401|selectin E	M30640|SELE|6401|selectin E	BC142677|SELE|6401|selectin E	BC142711|SELE|6401|selectin E	AK314214|SELE|6401|selectin E	NM_000450|SELE|6401|selectin E
hg18_v1_chr3_+_110338250_110338256	0.0182266	MSX1,2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr2_+_169645862_169645862	0.0180317	MSX1,2.p2	AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr2_-_162638174_162638243	0.0179863	MSX1,2.p2	AY429533|DPP4|1803|dipeptidyl-peptidase 4	AY429531|DPP4|1803|dipeptidyl-peptidase 4	AY429532|DPP4|1803|dipeptidyl-peptidase 4	BC013329|DPP4|1803|dipeptidyl-peptidase 4	AB451339|DPP4|1803|dipeptidyl-peptidase 4	AB451488|DPP4|1803|dipeptidyl-peptidase 4	M80536|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr1_-_167865973_167866000	0.017783	MSX1,2.p2	M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)	AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)	BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)	NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)
hg18_v1_chr14_-_63076155_63076164	0.017741	MSX1,2.p2	AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg18_v1_chr19_+_60168463_60168463	0.0174228	MSX1,2.p2	NM_001174081|NLRP2|55655|NLR family, pyrin domain containing 2
hg18_v1_chr11_+_91724909_91724909	0.0172518	MSX1,2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr16_-_65838899_65838956	0.017	MSX1,2.p2	AK301157|FHOD1|29109|formin homology 2 domain containing 1	NM_013241|FHOD1|29109|formin homology 2 domain containing 1
hg18_v1_chr2_-_96238234_96238288	0.0160226	MSX1,2.p2	AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg18_v1_chr12_-_110410730_110410798	0.0159494	MSX1,2.p2	CR619107|ATXN2|6311|ataxin 2
hg18_v1_chrX_-_62891712_62891729	0.0158892	MSX1,2.p2	BC018106|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	BC043497|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	AB007884|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg18_v1_chrX_+_54963953_54964012	0.0157486	MSX1,2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg18_v1_chrX_+_123062143_123062279	0.0154653	MSX1,2.p2	AK026678|STAG2|10735|stromal antigen 2
hg18_v1_chr17_+_46176105_46176113	0.0152012	MSX1,2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr19_-_17236522_17236572	0.0149198	MSX1,2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	CR599813|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg18_v1_chr9_+_115970599_115970708	0.0146687	MSX1,2.p2	AB058773|COL27A1|85301|collagen, type XXVII, alpha 1
hg18_v1_chrX_-_135690770_135690781	0.014437	MSX1,2.p2	BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg18_v1_chr17_-_4831388_4831460	0.0142866	MSX1,2.p2	AL831849|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2	NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2
hg18_v1_chr19_+_54068300_54068302	0.0140756	MSX1,2.p2	DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A	EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A	CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A
hg18_v1_chr14_+_22375656_22375697	0.0136697	MSX1,2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr7_-_86433139_86433226	0.013629	MSX1,2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr4_+_47403107_47403116	0.01336	MSX1,2.p2	
hg18_v1_chr7_+_106292932_106292967	0.0132677	MSX1,2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr3_+_50119261_50119280	0.0131367	MSX1,2.p2	CR618011|RBM5|10181|RNA binding motif protein 5
hg18_v1_chr1_+_29086206_29086282	0.0129564	MSX1,2.p2	M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg18_v1_chr1_+_31823097_31823185	0.0129331	MSX1,2.p2	AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1
hg18_v1_chr1_+_26516967_26517007	0.0127011	MSX1,2.p2	NM_001803|CD52|1043|CD52 molecule
hg18_v1_chr1_+_15637521_15637547	0.0125085	MSX1,2.p2	BC015118|CTRC|11330|chymotrypsin C (caldecrin)	CR749296|CTRC|11330|chymotrypsin C (caldecrin)	NM_007272|CTRC|11330|chymotrypsin C (caldecrin)	AK289447|CTRC|11330|chymotrypsin C (caldecrin)	BC059779|CTRC|11330|chymotrypsin C (caldecrin)	S82198|CTRC|11330|chymotrypsin C (caldecrin)
hg18_v1_chr1_+_144198658_144198802	0.0124014	MSX1,2.p2	CR627381|LIX1L|128077|Lix1 homolog (mouse)-like
hg18_v1_chr12_+_21545965_21546006	0.0122213	MSX1,2.p2	NM_016072|GOLT1B|51026|golgi transport 1B	AK311331|GOLT1B|51026|golgi transport 1B	AF068292|GOLT1B|51026|golgi transport 1B	AK309736|GOLT1B|51026|golgi transport 1B
hg18_v1_chr4_+_71235259_71235344	0.0121486	MSX1,2.p2	NM_033122|CABS1|85438|calcium-binding protein, spermatid-specific 1	AK057459|CABS1|85438|calcium-binding protein, spermatid-specific 1	AK315022|CABS1|85438|calcium-binding protein, spermatid-specific 1	AF380838|CABS1|85438|calcium-binding protein, spermatid-specific 1	BC034492|CABS1|85438|calcium-binding protein, spermatid-specific 1	BC046111|CABS1|85438|calcium-binding protein, spermatid-specific 1
hg18_v1_chr10_+_685887_686016	0.0121362	MSX1,2.p2	AK096000|C10orf108|414235|chromosome 10 open reading frame 108	AK296168|C10orf108|414235|chromosome 10 open reading frame 108	AK096013|C10orf108|414235|chromosome 10 open reading frame 108
hg18_v1_chr21_+_44729875_44729881	0.0119609	MSX1,2.p2	
hg18_v1_chr14_-_72995032_72995056	0.0119208	MSX1,2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr2_-_237987579_237987588	0.0119027	MSX1,2.p2	NM_004369|COL6A3|1293|collagen, type VI, alpha 3	NM_057164|COL6A3|1293|collagen, type VI, alpha 3	NM_057165|COL6A3|1293|collagen, type VI, alpha 3	NM_057166|COL6A3|1293|collagen, type VI, alpha 3	NM_057167|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chr6_-_114490701_114490734	0.0117738	MSX1,2.p2	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
hg18_v1_chr10_+_98730977_98731137	0.011444	MSX1,2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg18_v1_chr10_+_7785235_7785288	0.0114272	MSX1,2.p2	NM_002216|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr14_-_72995012_72995029	0.0113448	MSX1,2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr7_-_16471817_16471998	0.0112991	MSX1,2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	CR614752|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	CR606874|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg18_v1_chr12_-_50871953_50872069	0.0109521	MSX1,2.p2	AJ717743|KRT80|144501|keratin 80	BC033114|KRT80|144501|keratin 80	BC065180|KRT80|144501|keratin 80	NM_001081492|KRT80|144501|keratin 80	NM_182507|KRT80|144501|keratin 80
hg18_v1_chr6_-_119512035_119512056	0.0107692	MSX1,2.p2	BX538186|FAM184A|79632|family with sequence similarity 184, member A	AK091682|FAM184A|79632|family with sequence similarity 184, member A	NM_001100411|FAM184A|79632|family with sequence similarity 184, member A
hg18_v1_chr11_-_123414917_123414917	0.0106324	MSX1,2.p2	NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7
hg18_v1_chr4_+_110968594_110968607	0.010008	MSX1,2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr1_+_110683580_110683580	0.00991828	MSX1,2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr1_+_185064654_185064769	0.00976371	MSX1,2.p2	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)	AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)	M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)	M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)	AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)	BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg18_v1_chrX_-_76824726_76824936	0.00967682	MSX1,2.p2	CR605020|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U09820|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK293241|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr1_-_19089971_19089971	0.00947739	MSX1,2.p2	AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1
hg18_v1_chr7_-_115458064_115458112	0.00944627	MSX1,2.p2	CR933605|TFEC|22797|transcription factor EC
hg18_v1_chr11_+_101488380_101488454	0.00940823	MSX1,2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg18_v1_chr1_+_200246370_200246444	0.0092897	MSX1,2.p2	U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR598418|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR597744|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg18_v1_chr16_-_32596378_32596378	0.00888877	MSX1,2.p2	NM_001099687|TP53TG3B|729355|TP53 target 3B
hg18_v1_chr1_-_165789586_165789628	0.00864549	MSX1,2.p2	CR609800|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR623745|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR626333|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR616545|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR611446|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR607435|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR625312|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR622061|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg18_v1_chr10_+_7785290_7785326	0.00827285	MSX1,2.p2	AK291379|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr8_+_76614757_76614781	0.0080136	MSX1,2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr12_-_54150188_54150188	0.00783007	MSX1,2.p2	NM_001005499|OR6C70|390327|olfactory receptor, family 6, subfamily C, member 70
hg18_v1_chr4_-_70547962_70548067	0.00773388	MSX1,2.p2	BC156239|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC157012|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	AJ006054|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC142640|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg18_v1_chr20_+_2224612_2224686	0.00766783	MSX1,2.p2	NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)
hg18_v1_chrX_+_103181171_103181171	0.00744294	MSX1,2.p2	AK093522|H2BFM|286436|H2B histone family, member M	NM_001164416|H2BFM|286436|H2B histone family, member M
hg18_v1_chr11_-_55460451_55460451	0.00704982	MSX1,2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr21_-_26294332_26294369	0.00637232	MSX1,2.p2	X06981|APP|351|amyloid beta (A4) precursor protein	X06982|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr12_-_15757114_15757149	0.00579509	MSX1,2.p2	AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr5_-_13997588_13997588	0.00541214	MSX1,2.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg18_v1_chr15_+_63701322_63701322	0.00539459	MSX1,2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg18_v1_chr4_+_71372263_71372263	0.00514033	MSX1,2.p2	NM_001145007|MUC7|4589|mucin 7, secreted
hg18_v1_chr1_+_100099353_100099353	0.00512187	MSX1,2.p2	M85168|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000645|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr5_+_126887056_126887131	0.00494295	MSX1,2.p2	AK090486|PRRC1|133619|proline-rich coiled-coil 1	EU831910|PRRC1|133619|proline-rich coiled-coil 1	EU832004|PRRC1|133619|proline-rich coiled-coil 1
hg18_v1_chr9_+_133295353_133295370	0.00474249	MSX1,2.p2	
hg18_v1_chr9_+_124416768_124416837	0.00470471	MSX1,2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg18_v1_chr12_+_105602606_105602721	0.00457872	MSX1,2.p2	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg18_v1_chr7_+_91762227_91762355	0.00406856	MSX1,2.p2	
hg18_v1_chr1_+_26517032_26517037	0.00383759	MSX1,2.p2	CR607239|CD52|1043|CD52 molecule
hg18_v1_chr8_-_102872614_102872614	0.00379134	MSX1,2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg18_v1_chr10_+_7785347_7785354	0.00326084	MSX1,2.p2	BC132685|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr16_-_82830804_82830856	0.00306067	MSX1,2.p2	BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4	BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4	NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4
hg18_v1_chr9_+_129870268_129870340	0.00230816	MSX1,2.p2	AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr1_+_200018380_200018437	0.00210436	MSX1,2.p2	AB033039|NAV1|89796|neuron navigator 1
hg18_v1_chr7_+_30704125_30704171	0.00179825	MSX1,2.p2	AK309519|INMT|11185|indolethylamine N-methyltransferase
hg18_v1_chr21_+_39117064_39117101	0.0010455	MSX1,2.p2	CR608636|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr3_-_170864111_170864256	0.000988898	MSX1,2.p2	BC069498|MECOM|2122|MDS1 and EVI1 complex locus	GQ352634|MECOM|2122|MDS1 and EVI1 complex locus	U43292|MECOM|2122|MDS1 and EVI1 complex locus	AK304098|MECOM|2122|MDS1 and EVI1 complex locus	NM_004991|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr18_-_5286013_5286055	0.000761549	MSX1,2.p2	AK313236|ZFP161|7541|zinc finger protein 161 homolog (mouse)	BC057282|ZFP161|7541|zinc finger protein 161 homolog (mouse)	NM_001143823|ZFP161|7541|zinc finger protein 161 homolog (mouse)	NM_003409|ZFP161|7541|zinc finger protein 161 homolog (mouse)
hg18_v1_chr11_+_61473931_61473931	0.000737677	MSX1,2.p2	BC015220|BEST1|7439|bestrophin 1	NM_001139443|BEST1|7439|bestrophin 1	NM_004183|BEST1|7439|bestrophin 1
hg18_v1_chr10_+_114123828_114123959	0.000564257	MSX1,2.p2	NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5
hg18_v1_chr2_+_165804157_165804200	0.000497917	MSX1,2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr12_+_49605010_49605126	1.3783e-05	MSX1,2.p2	AY358797|METTL7A|25840|methyltransferase like 7A	AK024409|METTL7A|25840|methyltransferase like 7A	AK307071|METTL7A|25840|methyltransferase like 7A	AK225689|METTL7A|25840|methyltransferase like 7A	AK225595|METTL7A|25840|methyltransferase like 7A	AK023693|METTL7A|25840|methyltransferase like 7A	AK293356|METTL7A|25840|methyltransferase like 7A	AJ536233|METTL7A|25840|methyltransferase like 7A	BC008180|METTL7A|25840|methyltransferase like 7A	BC004492|METTL7A|25840|methyltransferase like 7A	CR612149|METTL7A|25840|methyltransferase like 7A	EU832657|METTL7A|25840|methyltransferase like 7A	EU832734|METTL7A|25840|methyltransferase like 7A	AL050159|METTL7A|25840|methyltransferase like 7A	AF113007|METTL7A|25840|methyltransferase like 7A
