hg18_v1_chr6_+_114285209_114285646	2.21711	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr7_-_27186400_27186400	2.08318	SOX2.p2	NM_153715|HOXA10|3206|homeobox A10
hg18_v1_chr6_-_139654807_139654900	2.0793	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg18_v1_chr6_+_12398514_12398644	1.98648	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	CR605456|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	CR602522|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg18_v1_chr17_+_34114924_34115326	1.60093	SOX2.p2	BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr1_-_224993498_224993625	1.56262	SOX2.p2	BC015009|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B
hg18_v1_chr17_-_44006808_44006847	1.41341	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr6_-_33028790_33028876	1.24933	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr17_+_63252704_63252719	1.24558	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr7_+_128802719_128802719	1.22304	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr11_-_85108030_85108030	1.21195	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr1_-_115039614_115039761	1.16895	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg18_v1_chr12_-_24606616_24606649	1.13139	SOX2.p2	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr7_+_153633127_153633510	1.12619	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr1_-_7923464_7923473	1.08044	SOX2.p2	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr6_+_21701942_21702760	1.06802	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg18_v1_chr5_-_125956996_125956999	1.05798	SOX2.p2	CR595547|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1
hg18_v1_chr11_-_85107569_85107858	1.04394	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr3_-_150422474_150422521	1.03418	SOX2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg18_v1_chr2_+_33213111_33213308	1.01684	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chr7_+_20336849_20336875	0.996348	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg18_v1_chr17_+_63252668_63252691	0.973348	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr18_-_27594696_27594840	0.973113	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg18_v1_chr6_+_130381408_130381428	0.951323	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg18_v1_chr12_+_14429499_14429579	0.932765	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr10_-_13789628_13789762	0.929742	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr12_-_68369322_68369323	0.924802	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr15_-_32398220_32398320	0.923505	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg18_v1_chr10_-_62002672_62002721	0.918357	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr2_-_110665188_110665188	0.910729	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr4_+_146623405_146623412	0.896785	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg18_v1_chr3_-_150993299_150993299	0.895534	SOX2.p2	BC171805|C3orf16|389161|chromosome 3 open reading frame 16	NM_001144960|C3orf16|389161|chromosome 3 open reading frame 16
hg18_v1_chr5_-_71838875_71839004	0.883808	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg18_v1_chr1_+_12757570_12757570	0.868114	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg18_v1_chr2_-_1905508_1905609	0.858906	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr16_-_71639670_71639774	0.858114	SOX2.p2	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chr3_-_3127057_3127057	0.821536	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg18_v1_chr2_-_37752272_37752294	0.801211	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr20_-_45418818_45418973	0.784645	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr11_-_14342627_14342627	0.779616	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr17_+_55269974_55270203	0.771054	SOX2.p2	
hg18_v1_chr7_+_27190688_27190810	0.762985	SOX2.p2	
hg18_v1_chr2_-_70329067_70329379	0.759507	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr4_+_37655385_37655439	0.7516	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg18_v1_chr8_-_81155564_81155605	0.744181	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg18_v1_chr4_-_186969041_186969041	0.724591	SOX2.p2	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr6_+_155579788_155579852	0.713268	SOX2.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg18_v1_chr12_+_47498778_47498966	0.709497	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	BC041811|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	AK289709|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76555|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	U07139|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76556|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	L27584|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg18_v1_chr14_+_76298693_76298917	0.707843	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg18_v1_chr1_-_223907283_223907538	0.698636	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr6_+_36752244_36752244	0.696214	SOX2.p2	NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg18_v1_chr1_-_177106702_177106837	0.687948	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg18_v1_chr9_-_35640852_35640946	0.675568	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr1_-_26105954_26105954	0.674315	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr5_-_111119846_111119846	0.67266	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr13_+_92677012_92677845	0.669304	SOX2.p2	NM_005708|GPC6|10082|glypican 6	AF105267|GPC6|10082|glypican 6	AY358462|GPC6|10082|glypican 6	BC106947|GPC6|10082|glypican 6	AK304338|GPC6|10082|glypican 6	AK130013|GPC6|10082|glypican 6	AK290144|GPC6|10082|glypican 6	AK074741|GPC6|10082|glypican 6
hg18_v1_chr10_-_32707549_32707737	0.668572	SOX2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr4_-_186969202_186969218	0.667251	SOX2.p2	BC011883|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145671|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr3_-_194118321_194118340	0.664611	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg18_v1_chr1_+_144152864_144153034	0.656524	SOX2.p2	CR612183|TXNIP|10628|thioredoxin interacting protein	CR593638|TXNIP|10628|thioredoxin interacting protein	CR614030|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr6_-_134680888_134680888	0.65414	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr2_-_218551786_218551796	0.653519	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg18_v1_chr5_-_160211623_160211796	0.653451	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr1_-_32574185_32574443	0.653388	SOX2.p2	CR602280|MARCKSL1|65108|MARCKS-like 1	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	CR593904|MARCKSL1|65108|MARCKS-like 1	CR611715|MARCKSL1|65108|MARCKS-like 1	CR611461|MARCKSL1|65108|MARCKS-like 1	CR607885|MARCKSL1|65108|MARCKS-like 1	CR625318|MARCKSL1|65108|MARCKS-like 1	CR599424|MARCKSL1|65108|MARCKS-like 1	CR608551|MARCKSL1|65108|MARCKS-like 1	CR603178|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	CR595141|MARCKSL1|65108|MARCKS-like 1	CR595693|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	CR602564|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1	CR625187|MARCKSL1|65108|MARCKS-like 1	CR590657|MARCKSL1|65108|MARCKS-like 1	CR594797|MARCKSL1|65108|MARCKS-like 1	CR596259|MARCKSL1|65108|MARCKS-like 1	CR596703|MARCKSL1|65108|MARCKS-like 1	CR596974|MARCKSL1|65108|MARCKS-like 1	CR597180|MARCKSL1|65108|MARCKS-like 1	CR599096|MARCKSL1|65108|MARCKS-like 1	CR617460|MARCKSL1|65108|MARCKS-like 1	CR621540|MARCKSL1|65108|MARCKS-like 1	CR624801|MARCKSL1|65108|MARCKS-like 1
hg18_v1_chr6_-_29752909_29752909	0.641806	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg18_v1_chr21_+_36429079_36429360	0.640062	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg18_v1_chr7_+_134114912_134114947	0.632294	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg18_v1_chr18_+_27281729_27281755	0.632042	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chr17_+_74542066_74542169	0.624576	SOX2.p2	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1
hg18_v1_chr5_+_143171918_143171984	0.622953	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg18_v1_chr7_+_139175420_139175703	0.613207	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	CR625096|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr16_-_83703496_83703614	0.599915	SOX2.p2	BC093665|FAM92B|339145|family with sequence similarity 92, member B	BC111944|FAM92B|339145|family with sequence similarity 92, member B	AK126284|FAM92B|339145|family with sequence similarity 92, member B	NM_198491|FAM92B|339145|family with sequence similarity 92, member B
hg18_v1_chr4_+_120029426_120029639	0.599697	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg18_v1_chr6_+_121798443_121798605	0.594608	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg18_v1_chr17_-_30783631_30783655	0.593918	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr6_-_116973465_116973465	0.592216	SOX2.p2	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)
hg18_v1_chr3_-_194118627_194118643	0.591826	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg18_v1_chr3_-_150533948_150534237	0.586228	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg18_v1_chr7_-_7541974_7541984	0.580882	SOX2.p2	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1	BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1	AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1	NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1
hg18_v1_chr2_+_120233676_120234064	0.572258	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg18_v1_chr8_-_28403652_28403745	0.566798	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16	CR590799|FBXO16|157574|F-box protein 16
hg18_v1_chr15_+_50098730_50098776	0.56355	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr2_+_101874809_101875119	0.561816	SOX2.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr16_+_21518633_21518678	0.561027	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg18_v1_chr6_-_56816403_56816460	0.56005	SOX2.p2	U31850|DST|667|dystonin
hg18_v1_chr12_-_109842736_109842786	0.558427	SOX2.p2	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow
hg18_v1_chr17_-_39094787_39094815	0.5546	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr7_+_134114957_134114968	0.551124	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg18_v1_chr2_-_207738858_207738944	0.547175	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr22_-_20419975_20420122	0.542494	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr17_-_10393664_10393741	0.533993	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg18_v1_chr16_-_15742883_15743013	0.530517	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr5_+_138706029_138706097	0.526002	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr11_+_61005160_61005228	0.523839	SOX2.p2	NM_001170753|C11orf66|220004|chromosome 11 open reading frame 66	NM_145017|C11orf66|220004|chromosome 11 open reading frame 66	AK057333|C11orf66|220004|chromosome 11 open reading frame 66	BC043246|C11orf66|220004|chromosome 11 open reading frame 66
hg18_v1_chr16_-_69876262_69876360	0.523171	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg18_v1_chr1_+_242281199_242281214	0.52199	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr8_-_18710575_18710684	0.520833	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr8_-_93144039_93144111	0.51589	SOX2.p2	
hg18_v1_chr1_+_66570363_66570520	0.513214	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chrX_-_76928334_76928430	0.51299	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr2_+_169631777_169631965	0.508704	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr7_-_111633428_111633575	0.507982	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr11_+_36274300_36274413	0.507005	SOX2.p2	NM_001160167|PRR5L|79899|proline rich 5 like	AK055042|PRR5L|79899|proline rich 5 like
hg18_v1_chr1_+_154120170_154120225	0.50637	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr7_-_130891861_130891945	0.50514	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr7_+_20337249_20337270	0.502988	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr15_+_50098724_50098728	0.499884	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr3_-_69254226_69254435	0.49881	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg18_v1_chr12_+_50633430_50633430	0.497648	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr2_-_37752731_37753056	0.497217	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr6_-_159386007_159386171	0.495562	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr8_-_38444398_38444519	0.493289	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr13_-_22905822_22905859	0.491363	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr22_+_38903825_38904066	0.487983	SOX2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr14_-_91483757_91483798	0.484703	SOX2.p2	CR615971|FBLN5|10516|fibulin 5	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg18_v1_chr2_-_207739815_207739925	0.483894	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr6_-_134415311_134415481	0.477921	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg18_v1_chr4_-_187114407_187114525	0.477136	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr1_+_183970093_183970305	0.47408	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg18_v1_chr7_+_116099648_116099768	0.472779	SOX2.p2	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg18_v1_chr7_-_27190882_27190893	0.470234	SOX2.p2	CR612696|HOXA11|3207|homeobox A11
hg18_v1_chr6_-_11340886_11340886	0.469967	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr10_+_18280773_18280897	0.466954	SOX2.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg18_v1_chr12_-_10173947_10174134	0.46071	SOX2.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg18_v1_chr6_-_11340869_11340885	0.458533	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr10_-_61819493_61819493	0.456141	SOX2.p2	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr7_-_142293382_142293628	0.452466	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg18_v1_chr17_-_36915329_36915391	0.448263	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	CR591347|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg18_v1_chr18_+_7936885_7936928	0.447219	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg18_v1_chr12_-_68379331_68379462	0.447044	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr2_-_39201631_39201695	0.446408	SOX2.p2	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr6_-_42527760_42527842	0.445779	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg18_v1_chr4_-_72868598_72868805	0.445673	SOX2.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr15_-_31147376_31147679	0.441446	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg18_v1_chr3_+_3056307_3056307	0.441108	SOX2.p2	AF464063|CNTN4|152330|contactin 4	NM_175612|CNTN4|152330|contactin 4
hg18_v1_chr1_-_114215768_114215897	0.441085	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr15_+_69220841_69220887	0.440411	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg18_v1_chr17_-_1195096_1195116	0.437851	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr9_+_4480193_4480681	0.434902	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg18_v1_chr4_+_146622154_146622511	0.434099	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg18_v1_chr14_-_88953059_88953268	0.433753	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg18_v1_chr8_-_124622434_124622628	0.432244	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr15_-_68128924_68129002	0.43026	SOX2.p2	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr9_+_115678365_115678476	0.430075	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr1_-_202730135_202730642	0.428693	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chr1_+_203106600_203106612	0.428337	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg18_v1_chr4_-_74307637_74307650	0.427797	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr1_+_116455898_116455898	0.427091	SOX2.p2	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)	NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)
hg18_v1_chr15_-_29734833_29734833	0.425939	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg18_v1_chr7_-_26202626_26202771	0.425923	SOX2.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr7_+_93388951_93389086	0.425354	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR622777|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR596301|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR592688|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR603702|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR590486|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg18_v1_chr6_+_21774624_21774653	0.423542	SOX2.p2	AK300802|FLJ22536|401237|hypothetical locus LOC401237	AK026189|FLJ22536|401237|hypothetical locus LOC401237
hg18_v1_chr6_+_168161401_168161429	0.423316	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg18_v1_chr4_-_140696740_140697026	0.421364	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr1_-_180624380_180624393	0.421184	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr16_+_55373241_55373268	0.421015	SOX2.p2	AK056637|NUP93|9688|nucleoporin 93kDa
hg18_v1_chr11_+_101693403_101693435	0.419548	SOX2.p2	NM_001165|BIRC3|330|baculoviral IAP repeat containing 3	NM_182962|BIRC3|330|baculoviral IAP repeat containing 3	AF070674|BIRC3|330|baculoviral IAP repeat containing 3
hg18_v1_chr2_-_198248828_198249012	0.417482	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chr2_+_138438277_138438531	0.415652	SOX2.p2	NM_001024074|HNMT|3176|histamine N-methyltransferase	NM_001024075|HNMT|3176|histamine N-methyltransferase	NM_006895|HNMT|3176|histamine N-methyltransferase	AF523356|HNMT|3176|histamine N-methyltransferase	AF523357|HNMT|3176|histamine N-methyltransferase	AF523358|HNMT|3176|histamine N-methyltransferase	AF523359|HNMT|3176|histamine N-methyltransferase	AF523360|HNMT|3176|histamine N-methyltransferase	U08092|HNMT|3176|histamine N-methyltransferase	BC005907|HNMT|3176|histamine N-methyltransferase	AK301462|HNMT|3176|histamine N-methyltransferase	AK313804|HNMT|3176|histamine N-methyltransferase	BC020677|HNMT|3176|histamine N-methyltransferase	D16224|HNMT|3176|histamine N-methyltransferase	DQ891166|HNMT|3176|histamine N-methyltransferase	DQ894348|HNMT|3176|histamine N-methyltransferase
hg18_v1_chr1_+_8928508_8928532	0.415083	SOX2.p2	NM_001215|CA6|765|carbonic anhydrase VI	AK300652|CA6|765|carbonic anhydrase VI	BC034350|CA6|765|carbonic anhydrase VI	M57892|CA6|765|carbonic anhydrase VI	AB102863|CA6|765|carbonic anhydrase VI	AB103091|CA6|765|carbonic anhydrase VI
hg18_v1_chr2_+_203207912_203207957	0.414827	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr5_-_88235624_88235677	0.414628	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_-_20413838_20413962	0.41435	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr14_-_88090641_88091251	0.413131	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr17_+_64922420_64922522	0.411815	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR616398|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR624804|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR625265|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR604345|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr21_+_34112456_34112625	0.410996	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr6_+_144649142_144649204	0.410506	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr2_+_110013297_110013297	0.409495	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr3_-_121883647_121883819	0.408745	SOX2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg18_v1_chr20_+_17622319_17622319	0.406971	SOX2.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr4_-_52578542_52578542	0.405979	SOX2.p2	CR749811|LRRC66|339977|leucine rich repeat containing 66	NM_001024611|LRRC66|339977|leucine rich repeat containing 66
hg18_v1_chr2_-_56266408_56266418	0.405098	SOX2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr1_+_33494745_33494760	0.402775	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr20_+_30831298_30831318	0.402145	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr17_+_34115383_34115450	0.400927	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr12_+_91620749_91620749	0.400448	SOX2.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg18_v1_chr10_+_24795465_24795485	0.398864	SOX2.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg18_v1_chr10_-_14686243_14686404	0.398823	SOX2.p2	CR610285|FAM107B|83641|family with sequence similarity 107, member B	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chrX_+_135079461_135079461	0.397529	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr20_+_54541672_54541766	0.396866	SOX2.p2	BC014951|C20orf107|388799|chromosome 20 open reading frame 107	NM_001013646|C20orf107|388799|chromosome 20 open reading frame 107	CR593795|C20orf107|388799|chromosome 20 open reading frame 107
hg18_v1_chr6_-_138935359_138935443	0.396754	SOX2.p2	NM_020464|NHSL1|57224|NHS-like 1
hg18_v1_chr7_-_111633620_111633776	0.396669	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr9_+_102275310_102275340	0.39561	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chrX_-_76928142_76928232	0.395281	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr2_+_232281470_232281487	0.394687	SOX2.p2	CR612758|PTMA|5757|prothymosin, alpha	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	CR594103|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg18_v1_chr1_+_176577228_176577286	0.394446	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg18_v1_chr5_-_14924555_14925155	0.393506	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr8_+_32623792_32623792	0.393167	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr10_-_74863303_74863375	0.391422	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr9_+_132700462_132700515	0.39034	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr17_+_72958920_72959049	0.389981	SOX2.p2	AK299828|SEPT9|10801|septin 9
hg18_v1_chr3_+_153469421_153469444	0.388692	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr10_+_71232281_71232313	0.388117	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg18_v1_chr1_+_24158887_24158897	0.387573	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr2_+_152900076_152900362	0.386242	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg18_v1_chr5_-_171643399_171643442	0.385818	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr15_-_43280664_43280664	0.385746	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr2_-_217248967_217249092	0.385715	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr18_+_27210737_27210872	0.385658	SOX2.p2	AY177664|DSG4|147409|desmoglein 4	NM_001134453|DSG4|147409|desmoglein 4	NM_177986|DSG4|147409|desmoglein 4	AY168788|DSG4|147409|desmoglein 4	AY228236|DSG4|147409|desmoglein 4	BC132907|DSG4|147409|desmoglein 4	BC132909|DSG4|147409|desmoglein 4	AY227350|DSG4|147409|desmoglein 4
hg18_v1_chr6_+_144654565_144654657	0.385436	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg18_v1_chr15_+_50098700_50098723	0.38254	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr7_+_142270634_142270640	0.379957	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg18_v1_chr5_+_36642213_36642213	0.379708	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr7_+_128136347_128136379	0.3797	SOX2.p2	AK093161|FAM71F1|84691|family with sequence similarity 71, member F1	AK302221|FAM71F1|84691|family with sequence similarity 71, member F1	BC040906|FAM71F1|84691|family with sequence similarity 71, member F1	AK310426|FAM71F1|84691|family with sequence similarity 71, member F1
hg18_v1_chr5_-_171643247_171643372	0.37845	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr1_+_24158898_24158969	0.374562	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr17_-_39265965_39266340	0.373522	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg18_v1_chr3_+_25444753_25444805	0.373337	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr8_+_1436938_1436975	0.373269	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr3_+_39484073_39484198	0.372224	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein	CR610306|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg18_v1_chr9_+_132700567_132700651	0.371716	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr22_-_17798998_17799102	0.371359	SOX2.p2	CU013101|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CU013389|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CR456503|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X81844|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr7_+_44754978_44755054	0.36875	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr17_-_10265991_10265991	0.368156	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr6_+_111242516_111242536	0.367971	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg18_v1_chr22_-_17799177_17799214	0.367383	SOX2.p2	BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr2_+_169021039_169021204	0.367372	SOX2.p2	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr2_-_197883739_197883789	0.366751	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg18_v1_chr17_+_7682355_7682441	0.36612	SOX2.p2	
hg18_v1_chr12_-_120725210_120725271	0.366095	SOX2.p2	CR611200|LOC338799|338799|hypothetical LOC338799
hg18_v1_chr1_-_180624494_180624558	0.365956	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr2_-_188021117_188021265	0.365103	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr5_-_39400319_39400411	0.364751	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg18_v1_chr5_-_150501393_150501408	0.36475	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg18_v1_chr3_+_25444837_25444905	0.36468	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr4_-_170314382_170314407	0.364092	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr1_+_9634368_9634415	0.360216	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg18_v1_chr6_-_11340887_11340906	0.359212	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr2_-_152663454_152663498	0.357959	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr10_+_114699953_114700631	0.356988	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg18_v1_chr10_+_80672842_80673430	0.354632	SOX2.p2	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr7_-_135083906_135084133	0.353911	SOX2.p2	BC137311|FAM180A|389558|family with sequence similarity 180, member A	BC137312|FAM180A|389558|family with sequence similarity 180, member A	AK297754|FAM180A|389558|family with sequence similarity 180, member A	AY358803|FAM180A|389558|family with sequence similarity 180, member A	AK290250|FAM180A|389558|family with sequence similarity 180, member A	AK310180|FAM180A|389558|family with sequence similarity 180, member A	NM_205855|FAM180A|389558|family with sequence similarity 180, member A
hg18_v1_chr12_-_43593977_43593977	0.353591	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr14_-_94677807_94677807	0.353317	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr6_+_89847019_89847181	0.352474	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr17_+_3324096_3324153	0.351923	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg18_v1_chr6_-_71069347_71069571	0.350426	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg18_v1_chr8_-_108579270_108579458	0.350167	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr14_-_30746431_30746441	0.350029	SOX2.p2	NM_015382|HECTD1|25831|HECT domain containing 1
hg18_v1_chr22_+_29420792_29420898	0.347962	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg18_v1_chr18_+_3584056_3584228	0.347017	SOX2.p2	AK093095|FLJ35776|649446|hypothetical LOC649446	BC137437|FLJ35776|649446|hypothetical LOC649446
hg18_v1_chr17_-_36587965_36587985	0.346977	SOX2.p2	BC127252|KRTAP4-2|85291|keratin associated protein 4-2	AJ406934|KRTAP4-2|85291|keratin associated protein 4-2	NM_033062|KRTAP4-2|85291|keratin associated protein 4-2
hg18_v1_chr6_+_167445284_167445284	0.346435	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr1_+_40612891_40612935	0.346395	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg18_v1_chr20_-_29457650_29457729	0.346052	SOX2.p2	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg18_v1_chr11_+_20005704_20005712	0.346044	SOX2.p2	AK307574|NAV2|89797|neuron navigator 2
hg18_v1_chr15_-_81667169_81667668	0.344553	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr6_+_50789215_50789215	0.344344	SOX2.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg18_v1_chr11_+_65026382_65026392	0.342931	SOX2.p2	
hg18_v1_chr12_-_31635089_31635281	0.341864	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr2_+_206255376_206255471	0.340757	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg18_v1_chr1_-_166965034_166965071	0.340654	SOX2.p2	CR591165|DPT|1805|dermatopontin	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	CR614953|DPT|1805|dermatopontin	CR622672|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	CR596260|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg18_v1_chr6_-_29635680_29635680	0.340328	SOX2.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg18_v1_chr2_+_99344060_99344285	0.339514	SOX2.p2	AL133563|EIF5B|9669|eukaryotic translation initiation factor 5B	CR604527|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr22_-_17892859_17892893	0.339189	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5	CR626038|CLDN5|7122|claudin 5
hg18_v1_chr15_+_37330176_37330258	0.338478	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg18_v1_chr6_+_89847183_89847332	0.338474	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr9_-_36390817_36390977	0.337242	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg18_v1_chr16_-_22293097_22293496	0.335739	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr12_-_6103945_6104096	0.334873	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg18_v1_chr6_-_56824371_56824452	0.333541	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chr16_+_15435825_15435978	0.333408	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	CR623458|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45	CR616063|C16orf45|89927|chromosome 16 open reading frame 45
hg18_v1_chr2_-_55053398_55053426	0.332869	SOX2.p2	
hg18_v1_chr17_-_46479127_46479269	0.331549	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr18_-_21186107_21186215	0.331536	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr20_-_17459973_17460012	0.331371	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg18_v1_chr1_+_32251988_32252183	0.329852	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr1_+_242281175_242281183	0.329236	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr12_+_94135645_94136005	0.328912	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr3_+_23904086_23904139	0.32891	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr21_+_42583259_42583306	0.32885	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg18_v1_chr9_+_102275455_102275646	0.32825	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr4_+_39376058_39376341	0.327478	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	CR606205|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
hg18_v1_chr18_-_13905534_13905538	0.327255	SOX2.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg18_v1_chr2_+_190981257_190981360	0.324513	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr2_+_62787534_62787535	0.322298	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg18_v1_chr7_-_16811131_16811262	0.321698	SOX2.p2	BC015503|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	CR610899|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)
hg18_v1_chr11_+_60858611_60858725	0.320849	SOX2.p2	BC001341|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)
hg18_v1_chr11_+_57285809_57286021	0.319857	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg18_v1_chrX_-_110542040_110542115	0.319106	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr2_+_46779827_46779983	0.318349	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr2_+_181553783_181553926	0.318294	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr14_+_54046295_54046427	0.31809	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	CR601996|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg18_v1_chr12_+_54231249_54231277	0.317577	SOX2.p2	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4
hg18_v1_chr5_-_33927724_33927880	0.317553	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr22_+_19239221_19239393	0.317451	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr3_+_20056527_20056527	0.316376	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr16_-_20323533_20323559	0.316167	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg18_v1_chr1_-_41398126_41398191	0.315725	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr9_-_36365965_36366036	0.315525	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg18_v1_chr22_-_21814208_21814279	0.315183	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg18_v1_chr5_-_38631263_38631263	0.314814	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr17_+_30594192_30594220	0.314804	SOX2.p2	NM_144975|SLFN5|162394|schlafen family member 5	AK303632|SLFN5|162394|schlafen family member 5	BX647942|SLFN5|162394|schlafen family member 5	AK054668|SLFN5|162394|schlafen family member 5	AK303299|SLFN5|162394|schlafen family member 5	BC021238|SLFN5|162394|schlafen family member 5
hg18_v1_chr6_-_44388964_44389045	0.314593	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg18_v1_chr8_+_40130143_40130362	0.314355	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	CR594872|C8orf4|56892|chromosome 8 open reading frame 4	CR620271|C8orf4|56892|chromosome 8 open reading frame 4	CR622918|C8orf4|56892|chromosome 8 open reading frame 4	CR600720|C8orf4|56892|chromosome 8 open reading frame 4	CR616793|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4	CR602517|C8orf4|56892|chromosome 8 open reading frame 4	CR618129|C8orf4|56892|chromosome 8 open reading frame 4	CR607025|C8orf4|56892|chromosome 8 open reading frame 4
hg18_v1_chr20_-_41788975_41789055	0.313808	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr17_+_11864841_11864972	0.312928	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr1_-_85816520_85816637	0.312848	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr6_+_37245860_37246341	0.312231	SOX2.p2	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	CR591847|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg18_v1_chr5_-_33928049_33928055	0.31211	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr1_+_242283129_242283204	0.311684	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr6_-_89984214_89984214	0.311455	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg18_v1_chr5_+_132237253_132237258	0.310478	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chr14_-_22516271_22516271	0.308391	SOX2.p2	AK096128|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_198086|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr5_+_149960820_149960850	0.306716	SOX2.p2	AL831818|SYNPO|11346|synaptopodin	NM_001166208|SYNPO|11346|synaptopodin
hg18_v1_chr7_-_11838260_11838369	0.306346	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr20_-_55718351_55718439	0.306279	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr17_-_70901303_70901442	0.306218	SOX2.p2	AF498925|GRB2|2885|growth factor receptor-bound protein 2	CR450363|GRB2|2885|growth factor receptor-bound protein 2	CR541942|GRB2|2885|growth factor receptor-bound protein 2	DQ891830|GRB2|2885|growth factor receptor-bound protein 2	DQ894923|GRB2|2885|growth factor receptor-bound protein 2	L29511|GRB2|2885|growth factor receptor-bound protein 2
hg18_v1_chr10_-_30958631_30958652	0.306191	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg18_v1_chrX_-_55225668_55225668	0.306016	SOX2.p2	NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10
hg18_v1_chr2_-_26058941_26058948	0.305346	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg18_v1_chr12_+_91654395_91654441	0.305022	SOX2.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg18_v1_chr2_+_166034402_166034458	0.304573	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr11_+_111313227_111313360	0.303966	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr14_+_22059174_22059204	0.303302	SOX2.p2	
hg18_v1_chr20_+_58064360_58064420	0.302204	SOX2.p2	AK091179|C20orf197|284756|chromosome 20 open reading frame 197	NM_173644|C20orf197|284756|chromosome 20 open reading frame 197
hg18_v1_chr3_-_101077605_101077757	0.301841	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr1_+_87567136_87567158	0.301679	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg18_v1_chr9_+_133259330_133259444	0.301157	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr14_+_85066207_85066246	0.300825	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr5_-_137502975_137503030	0.300721	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr5_+_36642424_36642547	0.300002	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr14_-_89155078_89155619	0.299395	SOX2.p2	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg18_v1_chr19_-_59476734_59476844	0.29863	SOX2.p2	BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
hg18_v1_chr5_-_16795336_16795338	0.298375	SOX2.p2	AK316138|MYO10|4651|myosin X
hg18_v1_chr17_-_39094427_39094456	0.297757	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr4_-_83566802_83566811	0.297074	SOX2.p2	AK057480|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_+_101874765_101874783	0.296876	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr14_+_85066265_85066324	0.296717	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr10_+_11247059_11247146	0.295411	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr8_-_38444982_38445229	0.295335	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr3_-_15348811_15349080	0.294995	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr14_-_30746577_30746796	0.294187	SOX2.p2	
hg18_v1_chr6_+_106653429_106653566	0.292278	SOX2.p2	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr11_-_95715976_95716126	0.291895	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr4_+_166350620_166350637	0.291191	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg18_v1_chr1_-_53566331_53566408	0.291144	SOX2.p2	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr20_-_55719946_55719946	0.290748	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr1_-_240228987_240229007	0.290247	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chr14_-_19843969_19843994	0.2894	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr10_-_11693535_11693750	0.289331	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr14_+_22911857_22912167	0.289207	SOX2.p2	AF461739|IL25|64806|interleukin 25	NM_172314|IL25|64806|interleukin 25	AF305200|IL25|64806|interleukin 25	AY359127|IL25|64806|interleukin 25	NM_022789|IL25|64806|interleukin 25	BC104929|IL25|64806|interleukin 25	BC104931|IL25|64806|interleukin 25	AF458059|IL25|64806|interleukin 25	BC069565|IL25|64806|interleukin 25	EU831823|IL25|64806|interleukin 25	EU831900|IL25|64806|interleukin 25
hg18_v1_chr3_-_14964861_14964934	0.288973	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr3_+_187917791_187918024	0.28824	SOX2.p2	NM_000893|KNG1|3827|kininogen 1	NM_001102416|KNG1|3827|kininogen 1	NM_001166451|KNG1|3827|kininogen 1	AK303768|KNG1|3827|kininogen 1	CR606410|KNG1|3827|kininogen 1	CR590668|KNG1|3827|kininogen 1	AK298440|KNG1|3827|kininogen 1	AK315230|KNG1|3827|kininogen 1	CR590667|KNG1|3827|kininogen 1	CR607387|KNG1|3827|kininogen 1	AK290839|KNG1|3827|kininogen 1	BC060039|KNG1|3827|kininogen 1	CR591010|KNG1|3827|kininogen 1	K02566|KNG1|3827|kininogen 1	BC026253|KNG1|3827|kininogen 1
hg18_v1_chr7_-_26198673_26198679	0.287343	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr17_-_44026321_44026411	0.286921	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg18_v1_chr3_-_137395966_137395999	0.286439	SOX2.p2	AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)	NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)
hg18_v1_chr17_-_36725470_36725472	0.286195	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg18_v1_chr14_-_30565275_30565368	0.284233	SOX2.p2	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg18_v1_chr1_+_61320213_61321079	0.283278	SOX2.p2	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr17_-_36577949_36577949	0.283126	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg18_v1_chr10_-_104943000_104943074	0.28291	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr3_-_15515382_15515382	0.28269	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr5_+_176955595_176955637	0.281958	SOX2.p2	
hg18_v1_chr16_+_28993770_28993843	0.281657	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg18_v1_chr17_-_36594652_36594672	0.281526	SOX2.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg18_v1_chr17_-_45621571_45621615	0.281194	SOX2.p2	J00112|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr20_-_47963682_47963682	0.280742	SOX2.p2	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chr10_-_13429397_13429798	0.280368	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr3_-_188492163_188492503	0.28036	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg18_v1_chr2_-_86418143_86418346	0.280001	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg18_v1_chr5_+_55098469_55098495	0.279969	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr18_+_54682261_54682397	0.279934	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr11_+_6854431_6854454	0.279857	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chr17_+_35629080_35629200	0.27903	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg18_v1_chr14_-_91483325_91483563	0.278822	SOX2.p2	AJ133490|FBLN5|10516|fibulin 5	CR457140|FBLN5|10516|fibulin 5	CR604352|FBLN5|10516|fibulin 5	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg18_v1_chr16_-_3870121_3870121	0.278371	SOX2.p2	AB210043|CREBBP|1387|CREB binding protein	NM_001079846|CREBBP|1387|CREB binding protein	NM_004380|CREBBP|1387|CREB binding protein
hg18_v1_chr12_+_69046241_69046826	0.277738	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr8_+_144366442_144366517	0.277173	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg18_v1_chr13_-_73606362_73606432	0.276854	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr2_+_203208064_203208145	0.27679	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr15_+_91244563_91244606	0.27628	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr9_+_40690290_40690290	0.276053	SOX2.p2	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7	NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3
hg18_v1_chr1_+_109057078_109057078	0.275607	SOX2.p2	NM_001144937|FNDC7|163479|fibronectin type III domain containing 7
hg18_v1_chr15_-_72282146_72282272	0.275482	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr16_-_15741438_15741475	0.27543	SOX2.p2	BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr22_-_15453440_15453699	0.274556	SOX2.p2	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2
hg18_v1_chr8_-_38444675_38444848	0.274498	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr11_+_66034652_66034733	0.273959	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	CR625482|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg18_v1_chr16_-_20271530_20271537	0.273617	SOX2.p2	AK127643|UMOD|7369|uromodulin	AK055722|UMOD|7369|uromodulin	AK091961|UMOD|7369|uromodulin	AK096043|UMOD|7369|uromodulin	M15881|UMOD|7369|uromodulin	BC035975|UMOD|7369|uromodulin	AK127648|UMOD|7369|uromodulin	NM_001008389|UMOD|7369|uromodulin	NM_003361|UMOD|7369|uromodulin
hg18_v1_chr4_+_78172966_78173092	0.27356	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr17_+_45703765_45703765	0.273502	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg18_v1_chr2_-_30883775_30883820	0.272678	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg18_v1_chr14_+_65205750_65205885	0.272578	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr7_+_128615948_128615948	0.272417	SOX2.p2	BC009989|SMO|6608|smoothened homolog (Drosophila)	NM_005631|SMO|6608|smoothened homolog (Drosophila)
hg18_v1_chrX_+_135079120_135079120	0.272385	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr10_-_14686413_14686457	0.272085	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr20_+_23293020_23293020	0.27181	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chr2_-_36929520_36929549	0.270957	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr2_+_181553613_181553650	0.270624	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr20_-_20641122_20641334	0.270378	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg18_v1_chr5_+_35892747_35892834	0.26843	SOX2.p2	BC020717|IL7R|3575|interleukin 7 receptor	FJ529208|IL7R|3575|interleukin 7 receptor	NM_002185|IL7R|3575|interleukin 7 receptor	AK301220|IL7R|3575|interleukin 7 receptor	BC067537|IL7R|3575|interleukin 7 receptor	BC067538|IL7R|3575|interleukin 7 receptor	BC067539|IL7R|3575|interleukin 7 receptor	BC067540|IL7R|3575|interleukin 7 receptor	BC069999|IL7R|3575|interleukin 7 receptor	M29696|IL7R|3575|interleukin 7 receptor	AK315251|IL7R|3575|interleukin 7 receptor
hg18_v1_chr11_-_85074848_85074967	0.267893	SOX2.p2	CR595564|CCDC89|220388|coiled-coil domain containing 89	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg18_v1_chr5_+_140844810_140844927	0.266923	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg18_v1_chr6_-_133076873_133076889	0.26618	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr5_+_15553288_15553310	0.265073	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr4_-_24195113_24195235	0.264914	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr8_-_102029997_102030305	0.263039	SOX2.p2	CR611466|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	S79449|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ891706|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ894884|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	CR625952|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr6_+_29472310_29472455	0.262792	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg18_v1_chr15_+_78520634_78520686	0.262492	SOX2.p2	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chr8_+_59486376_59486502	0.262489	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg18_v1_chr6_+_126282078_126282170	0.262307	SOX2.p2	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr5_+_125828685_125828745	0.26216	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr15_-_72281904_72281919	0.261161	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr3_-_187744808_187744860	0.260296	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr9_-_36390212_36390295	0.26015	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr4_+_95348017_95348257	0.259328	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg18_v1_chr21_-_42172476_42172659	0.25897	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg18_v1_chr10_+_24795446_24795454	0.25849	SOX2.p2	AK300422|KIAA1217|56243|KIAA1217
hg18_v1_chr16_+_26985719_26985778	0.258269	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg18_v1_chr15_+_91248706_91248823	0.258004	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr2_+_54638957_54639182	0.257947	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr6_-_130072971_130073068	0.256503	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg18_v1_chr14_+_34831355_34831433	0.255774	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR593415|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg18_v1_chr10_+_69314714_69314882	0.255446	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chr20_-_43410437_43410501	0.254444	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg18_v1_chr1_+_184532027_184532033	0.2536	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr20_+_2743613_2743679	0.253281	SOX2.p2	AK312218|C20orf141|128653|chromosome 20 open reading frame 141	BC014591|C20orf141|128653|chromosome 20 open reading frame 141	NM_080739|C20orf141|128653|chromosome 20 open reading frame 141	AL713708|C20orf141|128653|chromosome 20 open reading frame 141
hg18_v1_chr1_-_45924770_45924888	0.253058	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg18_v1_chr3_+_115099007_115099092	0.25302	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg18_v1_chr7_+_73341640_73341807	0.252968	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr7_+_116447499_116447508	0.252741	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr13_-_32678142_32678186	0.252306	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr11_+_111313067_111313170	0.251766	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr2_+_85834111_85834922	0.25153	SOX2.p2	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)	AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)	BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)	AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)	BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)	AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)
hg18_v1_chr20_+_31613800_31613877	0.251481	SOX2.p2	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr6_+_135544138_135544145	0.251402	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr22_-_25205376_25205550	0.250974	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg18_v1_chr1_+_109827975_109828164	0.25066	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg18_v1_chr2_+_44356100_44356178	0.250431	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg18_v1_chr17_-_53420595_53420639	0.250231	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr4_+_113437947_113438006	0.24993	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr11_-_64403712_64403762	0.249927	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chrX_-_128616594_128616613	0.24981	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg18_v1_chr4_+_110968594_110968607	0.24957	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr20_+_17628592_17628604	0.249484	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr7_-_21951946_21952068	0.249383	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr10_+_86121526_86121671	0.248697	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr10_+_170423_170423	0.24825	SOX2.p2	NM_001161482|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg18_v1_chr15_-_68781662_68781700	0.24818	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr1_+_90233238_90233371	0.247683	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr20_-_118263_118321	0.247266	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr2_+_181553333_181553608	0.24647	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr2_-_156897286_156897532	0.245812	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr5_+_139856688_139856810	0.245171	SOX2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr11_+_20001130_20001211	0.244875	SOX2.p2	NM_001111019|NAV2|89797|neuron navigator 2
hg18_v1_chr7_-_150555153_150555263	0.244648	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg18_v1_chr8_+_21833162_21833227	0.244037	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg18_v1_chr14_+_19318240_19318321	0.24362	SOX2.p2	BC136987|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1	NM_001005500|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1
hg18_v1_chr12_+_12829807_12829881	0.243457	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr2_+_218972963_218973087	0.242713	SOX2.p2	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chrX_+_70419766_70419766	0.242272	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr7_-_107558021_107558036	0.241582	SOX2.p2	BC142619|LAMB4|22798|laminin, beta 4	BC140804|LAMB4|22798|laminin, beta 4	BC144591|LAMB4|22798|laminin, beta 4	AF028816|LAMB4|22798|laminin, beta 4	AK300385|LAMB4|22798|laminin, beta 4	NM_007356|LAMB4|22798|laminin, beta 4
hg18_v1_chr17_-_59403932_59404009	0.241443	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg18_v1_chr7_+_111633972_111634041	0.241286	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg18_v1_chr12_+_62524778_62524849	0.241127	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr6_-_41148061_41148332	0.241039	SOX2.p2	CR620893|C6orf130|221443|chromosome 6 open reading frame 130	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg18_v1_chr5_-_36337756_36337767	0.240977	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr3_-_69212192_69212234	0.24075	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr15_+_91244422_91244559	0.240329	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr1_+_13784553_13784553	0.240242	SOX2.p2	NM_001006624|PDPN|10630|podoplanin	NM_001006625|PDPN|10630|podoplanin
hg18_v1_chr14_+_38772870_38773069	0.24021	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg18_v1_chr16_-_11282595_11282707	0.239784	SOX2.p2	BT006746|PRM1|5619|protamine 1	DQ892487|PRM1|5619|protamine 1	DQ895698|PRM1|5619|protamine 1	CR595410|PRM1|5619|protamine 1	CR607534|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	CR612045|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1	CR601490|PRM1|5619|protamine 1	CR625800|PRM1|5619|protamine 1
hg18_v1_chr14_+_22059212_22059254	0.239544	SOX2.p2	
hg18_v1_chr9_+_90193807_90193830	0.23954	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr1_-_17180659_17180667	0.239336	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg18_v1_chr22_+_21852911_21853187	0.238824	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg18_v1_chr11_+_6823458_6823489	0.238803	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg18_v1_chr7_+_28692122_28692294	0.237821	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr12_-_49076658_49076671	0.237764	SOX2.p2	BC054024|FAM186A|121006|family with sequence similarity 186, member A	AL833333|FAM186A|121006|family with sequence similarity 186, member A	NM_001145475|FAM186A|121006|family with sequence similarity 186, member A
hg18_v1_chr18_-_18251808_18251875	0.237406	SOX2.p2	BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1
hg18_v1_chr4_+_144654005_144654352	0.237026	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chrX_+_100220491_100220527	0.236143	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg18_v1_chr7_+_111633878_111633938	0.235944	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg18_v1_chr17_-_36347197_36347361	0.235643	SOX2.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg18_v1_chr6_+_28200365_28200391	0.235417	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg18_v1_chr4_+_88790477_88790482	0.235082	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg18_v1_chr17_-_60088459_60088600	0.235033	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr12_+_48047428_48047895	0.234782	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr17_+_45617676_45617862	0.233908	SOX2.p2	
hg18_v1_chr17_-_53515563_53515669	0.233863	SOX2.p2	
hg18_v1_chr15_-_72281833_72281878	0.233698	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr1_+_87569959_87570047	0.233668	SOX2.p2	CR599134|LMO4|8543|LIM domain only 4	BC065818|LMO4|8543|LIM domain only 4
hg18_v1_chr2_-_175578156_175578415	0.233403	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1
hg18_v1_chr1_+_162795538_162795683	0.232843	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg18_v1_chr16_-_30841938_30842090	0.231522	SOX2.p2	BC101464|NCRNA00095|283932|non-protein coding RNA 95	BC101988|NCRNA00095|283932|non-protein coding RNA 95	BC105687|NCRNA00095|283932|non-protein coding RNA 95	BC105926|NCRNA00095|283932|non-protein coding RNA 95	AK092263|NCRNA00095|283932|non-protein coding RNA 95
hg18_v1_chr3_+_188397967_188398105	0.231413	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg18_v1_chr15_-_54175954_54176025	0.231076	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr6_+_135544214_135544344	0.230934	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr7_-_76667045_76667100	0.230107	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr17_-_45617899_45617938	0.229665	SOX2.p2	J00113|COL1A1|1277|collagen, type I, alpha 1	M32798|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr2_-_74634569_74634595	0.229473	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg18_v1_chr1_+_89871281_89871424	0.22945	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr14_+_76297885_76298532	0.228651	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr13_-_29938029_29938081	0.228635	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr11_-_5523328_5523354	0.228441	SOX2.p2	NM_001005289|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1	BC136998|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1
hg18_v1_chr1_+_205068844_205068844	0.228263	SOX2.p2	AF453946|IL19|29949|interleukin 19	NM_013371|IL19|29949|interleukin 19
hg18_v1_chr15_+_90815910_90815910	0.227833	SOX2.p2	AK057393|C15orf32|145858|chromosome 15 open reading frame 32	NM_153040|C15orf32|145858|chromosome 15 open reading frame 32
hg18_v1_chr5_-_141318810_141318810	0.227658	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr5_+_138705469_138705516	0.22714	SOX2.p2	CR593605|PAIP2|51247|poly(A) binding protein interacting protein 2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr20_-_14266200_14266312	0.227012	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg18_v1_chr7_+_47661366_47661366	0.226948	SOX2.p2	AK126096|C7orf65|401335|chromosome 7 open reading frame 65	NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65
hg18_v1_chr2_+_108637698_108637699	0.226565	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr6_-_27548438_27548923	0.226482	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg18_v1_chr3_+_142175329_142175385	0.22642	SOX2.p2	CR602139|SLC25A36|55186|solute carrier family 25, member 36
hg18_v1_chr1_-_21375891_21375931	0.226174	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr17_-_45621312_45621316	0.226111	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr6_+_135544170_135544207	0.226053	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr11_-_4555625_4555626	0.225869	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr1_-_200380477_200380489	0.225841	SOX2.p2	CR597275|ARL8A|127829|ADP-ribosylation factor-like 8A	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr7_-_148356433_148356543	0.225493	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr6_-_46401174_46401352	0.225405	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2	CR604948|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr7_+_142850667_142850667	0.22515	SOX2.p2	BC100938|TAS2R60|338398|taste receptor, type 2, member 60	BC100939|TAS2R60|338398|taste receptor, type 2, member 60	BC100940|TAS2R60|338398|taste receptor, type 2, member 60	BC100941|TAS2R60|338398|taste receptor, type 2, member 60	NM_177437|TAS2R60|338398|taste receptor, type 2, member 60
hg18_v1_chr1_+_103898844_103898844	0.224988	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg18_v1_chr6_-_24985432_24985561	0.22482	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr6_-_13922525_13922969	0.223896	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr21_+_17807167_17807318	0.223845	SOX2.p2	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg18_v1_chr10_+_72642274_72642499	0.22361	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg18_v1_chr6_-_99904251_99904251	0.222604	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg18_v1_chr15_-_72282452_72282498	0.222257	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr5_+_76418545_76418662	0.222183	SOX2.p2	CR597892|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr8_+_12914143_12914143	0.221962	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg18_v1_chr2_+_217206327_217206441	0.221381	SOX2.p2	CR618404|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR625740|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR614828|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR595316|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR592781|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR602232|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR606610|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR607166|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR610845|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR611812|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR623237|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR624731|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR590929|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR603359|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg18_v1_chr21_+_36458708_36458708	0.221181	SOX2.p2	AJ237839|DOPEY2|9980|dopey family member 2	NM_005128|DOPEY2|9980|dopey family member 2
hg18_v1_chr17_+_70092651_70092651	0.221152	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg18_v1_chr17_-_36294962_36295023	0.22115	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr1_-_41259973_41260013	0.220918	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg18_v1_chr8_-_38445272_38445345	0.220832	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr3_+_173954940_173955053	0.220187	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr15_+_75074793_75074972	0.219808	SOX2.p2	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr1_-_171441234_171441319	0.219604	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr7_+_129693938_129693963	0.219467	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg18_v1_chr7_-_27108826_27108918	0.2194	SOX2.p2	AK096742|HOXA2|3199|homeobox A2	NM_006735|HOXA2|3199|homeobox A2
hg18_v1_chr17_+_54652609_54652752	0.219255	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg18_v1_chr7_+_38984133_38984133	0.21908	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr10_+_18589589_18589703	0.218931	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr11_-_101906640_101906699	0.218927	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg18_v1_chr9_-_14858974_14859024	0.218806	SOX2.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr15_+_57286313_57286376	0.218718	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr15_-_47042932_47042932	0.218178	SOX2.p2	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4
hg18_v1_chr6_+_123142559_123142638	0.217894	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr1_+_87567164_87567375	0.217876	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg18_v1_chr2_+_218972721_218972847	0.217727	SOX2.p2	AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chr14_-_19843918_19843965	0.216203	SOX2.p2	CR597562|TTC5|91875|tetratricopeptide repeat domain 5	CR600482|TTC5|91875|tetratricopeptide repeat domain 5	CR610331|TTC5|91875|tetratricopeptide repeat domain 5	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	CR608059|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr15_+_75074483_75074608	0.215823	SOX2.p2	AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	CR593209|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr1_+_87569889_87569938	0.215644	SOX2.p2	
hg18_v1_chr10_-_14856901_14856901	0.215551	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr7_+_116182676_116182699	0.214627	SOX2.p2	
hg18_v1_chr4_-_118226119_118226183	0.214031	SOX2.p2	CR596564|TRAM1L1|133022|translocation associated membrane protein 1-like 1	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1	BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1	NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1
hg18_v1_chr11_-_129689669_129689816	0.213929	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr16_+_6009095_6009357	0.213008	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr12_-_47869067_47869133	0.21246	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr1_-_16033866_16033977	0.211836	SOX2.p2	
hg18_v1_chr3_+_189425886_189425970	0.211752	SOX2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr3_-_11736946_11737284	0.211234	SOX2.p2	D50911|VGLL4|9686|vestigial like 4 (Drosophila)	BC001514|VGLL4|9686|vestigial like 4 (Drosophila)	AK130542|VGLL4|9686|vestigial like 4 (Drosophila)	BC000763|VGLL4|9686|vestigial like 4 (Drosophila)	BC003038|VGLL4|9686|vestigial like 4 (Drosophila)	NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr14_-_104333123_104333130	0.211022	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr1_-_206125877_206126015	0.210881	SOX2.p2	
hg18_v1_chr1_-_116184846_116184884	0.210048	SOX2.p2	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr2_+_228386800_228386871	0.2098	SOX2.p2	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg18_v1_chr17_-_44037332_44037355	0.20956	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr1_+_32777556_32777707	0.209487	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr5_+_27508139_27508182	0.209459	SOX2.p2	BC039509|LOC643401|643401|hypothetical protein LOC643401	BC046201|LOC643401|643401|hypothetical protein LOC643401
hg18_v1_chr3_+_186563529_186563723	0.209265	SOX2.p2	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr2_-_234317362_234317399	0.209118	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr15_-_81667773_81667828	0.208784	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr12_+_108452117_108452171	0.208403	SOX2.p2	AK304678|UBE3B|89910|ubiquitin protein ligase E3B
hg18_v1_chr5_+_172000793_172000924	0.208209	SOX2.p2	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg18_v1_chr16_+_30314276_30314347	0.20715	SOX2.p2	
hg18_v1_chr12_+_123339662_123339662	0.206669	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg18_v1_chr3_+_70068440_70068563	0.206399	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr3_-_194579207_194579325	0.206014	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr2_-_152299229_152299246	0.205977	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr15_-_57013058_57013090	0.205412	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr8_+_107529327_107529327	0.204994	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr7_+_116380590_116380653	0.204824	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr6_+_10663934_10663934	0.204697	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr14_-_34414201_34414239	0.204669	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr1_-_151780720_151780864	0.204328	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg18_v1_chr9_-_19368815_19368917	0.204206	SOX2.p2	BC035447|RPS6|6194|ribosomal protein S6
hg18_v1_chr6_+_112481970_112482251	0.204089	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg18_v1_chr7_-_158304062_158304201	0.204029	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chr1_+_151498802_151498802	0.203816	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr9_-_4289915_4290011	0.203691	SOX2.p2	DQ438877|GLIS3|169792|GLIS family zinc finger 3	DQ438881|GLIS3|169792|GLIS family zinc finger 3	DQ438886|GLIS3|169792|GLIS family zinc finger 3	DQ438891|GLIS3|169792|GLIS family zinc finger 3	DQ438898|GLIS3|169792|GLIS family zinc finger 3	DQ438901|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr17_-_76985538_76985644	0.20334	SOX2.p2	
hg18_v1_chr11_+_4564596_4564596	0.203177	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg18_v1_chr19_+_10574055_10574212	0.203022	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr5_+_132433979_132434025	0.202148	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr4_-_24195243_24195273	0.202024	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr15_+_82945223_82945347	0.201714	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr21_-_36870736_36870736	0.201425	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg18_v1_chr4_-_152316105_152316153	0.201089	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr11_+_10787328_10787419	0.200861	SOX2.p2	
hg18_v1_chr8_+_21833111_21833160	0.20073	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg18_v1_chr1_+_57093030_57093138	0.199808	SOX2.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide
hg18_v1_chr17_+_65009986_65010164	0.199786	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr7_-_91632525_91632525	0.199589	SOX2.p2	NM_001161528|LOC401387|401387|leucine-rich repeat and death domain-containing protein
hg18_v1_chr6_+_148705817_148705952	0.199482	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr8_+_79740813_79740938	0.199438	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr17_-_41625921_41625942	0.199138	SOX2.p2	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr1_+_50344550_50344550	0.197572	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr21_-_39642935_39642949	0.19757	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr12_+_54646814_54646899	0.197416	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	CR603533|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg18_v1_chr1_+_165330710_165330710	0.19721	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg18_v1_chr19_-_50963942_50963968	0.196989	SOX2.p2	
hg18_v1_chr20_+_34428857_34428857	0.196809	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg18_v1_chr16_+_24696069_24696181	0.196786	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chrX_+_41077594_41077594	0.196575	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr13_-_93929719_93929936	0.19612	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr17_+_58625086_58625100	0.196041	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr5_+_138705445_138705467	0.195887	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	CR592408|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2	CR611769|PAIP2|51247|poly(A) binding protein interacting protein 2	CR626771|PAIP2|51247|poly(A) binding protein interacting protein 2	CR600873|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr1_-_199742871_199743009	0.195814	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr10_+_11087259_11087268	0.195243	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr1_+_66570683_66570684	0.19502	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr1_-_53566171_53566330	0.194941	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr20_-_43609409_43609478	0.194752	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	BC003675|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg18_v1_chr4_-_189263395_189263401	0.194294	SOX2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg18_v1_chr5_-_178977441_178977522	0.194294	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr21_-_30460841_30460914	0.193464	SOX2.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg18_v1_chr17_-_45110339_45110523	0.193207	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	CR595475|SPOP|8405|speckle-type POZ protein	CR603514|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	CR592684|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	CR590571|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg18_v1_chr5_+_92944680_92944798	0.193174	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr7_+_141457977_141458039	0.192917	SOX2.p2	AK000645|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111973|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111975|LOC93432|93432|maltase-glucoamylase-like pseudogene
hg18_v1_chr2_-_160181206_160181325	0.192611	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr5_-_168204430_168204444	0.192603	SOX2.p2	
hg18_v1_chr7_-_128203079_128203079	0.192532	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg18_v1_chr13_+_97856148_97856267	0.192105	SOX2.p2	
hg18_v1_chr4_-_184478920_184478920	0.192078	SOX2.p2	NM_001111319|CLDN22|53842|claudin 22
hg18_v1_chr15_+_75074743_75074780	0.191572	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr17_-_44022595_44022629	0.191156	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg18_v1_chr17_-_23903772_23903786	0.191031	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	CR613554|UNC119|9094|unc-119 homolog (C. elegans)	CR600663|UNC119|9094|unc-119 homolog (C. elegans)
hg18_v1_chr16_+_24475129_24475130	0.190869	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr5_-_111120929_111121032	0.190367	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr5_-_175896829_175897037	0.189787	SOX2.p2	AB029023|RNF44|22838|ring finger protein 44	BC039833|RNF44|22838|ring finger protein 44	BC063297|RNF44|22838|ring finger protein 44	NM_014901|RNF44|22838|ring finger protein 44
hg18_v1_chr14_-_22825148_22825182	0.189709	SOX2.p2	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr7_+_116238309_116238359	0.18947	SOX2.p2	DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr19_-_44920451_44920507	0.189328	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chrX_-_99778340_99778503	0.188981	SOX2.p2	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr22_-_17303654_17303809	0.188817	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr4_+_77575276_77575276	0.188661	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr11_+_5862076_5862098	0.188334	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg18_v1_chr14_-_104333060_104333120	0.188108	SOX2.p2	BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr10_+_70150936_70151043	0.18806	SOX2.p2	AF465616|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK023438|CCAR1|55749|cell division cycle and apoptosis regulator 1	NM_018237|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307550|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK298004|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC058846|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK001701|CCAR1|55749|cell division cycle and apoptosis regulator 1	AY249140|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK122871|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK292649|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK299307|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307704|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307671|CCAR1|55749|cell division cycle and apoptosis regulator 1	BX647943|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC130626|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC132725|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC144118|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC108682|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr1_+_2927905_2927925	0.187205	SOX2.p2	NM_080431|ACTRT2|140625|actin-related protein T2	AK058153|ACTRT2|140625|actin-related protein T2	AK314500|ACTRT2|140625|actin-related protein T2	BC029499|ACTRT2|140625|actin-related protein T2
hg18_v1_chr10_-_105835609_105835630	0.186753	SOX2.p2	BC004478|COL17A1|1308|collagen, type XVII, alpha 1	NM_000494|COL17A1|1308|collagen, type XVII, alpha 1
hg18_v1_chr22_-_17799215_17799280	0.186733	SOX2.p2	NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr4_-_100284395_100284473	0.186537	SOX2.p2	M15943|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK290835|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK295556|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK313649|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	BC022319|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_000670|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide
hg18_v1_chr3_+_151171755_151171799	0.186533	SOX2.p2	BC012363|LOC646903|646903|hypothetical LOC646903	CR593252|LOC646903|646903|hypothetical LOC646903
hg18_v1_chr12_-_47869134_47869153	0.186286	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr6_+_15354278_15354505	0.18623	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr17_-_70039107_70039169	0.186129	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr1_+_201363458_201363483	0.186002	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg18_v1_chr2_-_160180197_160180323	0.185476	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chrX_-_15242589_15242601	0.185289	SOX2.p2	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr5_-_137542198_137542267	0.184831	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg18_v1_chr1_+_22200735_22200753	0.184683	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg18_v1_chr15_+_47502666_47502771	0.184392	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr5_+_121493113_121493176	0.184328	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chr3_+_66094324_66094324	0.184169	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr15_+_70193652_70193652	0.184114	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg18_v1_chr5_-_121842680_121842684	0.183983	SOX2.p2	
hg18_v1_chr6_+_12825818_12825911	0.183915	SOX2.p2	AK090769|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	AB051520|PHACTR1|221692|phosphatase and actin regulator 1	BC101526|PHACTR1|221692|phosphatase and actin regulator 1	BC101528|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr6_+_157141565_157141570	0.183851	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr8_+_54926920_54927012	0.183712	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg18_v1_chr10_+_102722275_102722275	0.183558	SOX2.p2	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg18_v1_chr1_+_165564904_165564941	0.183415	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr1_+_42701460_42701611	0.182941	SOX2.p2	AL832217|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr13_+_23451919_23451948	0.182825	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr1_-_85703198_85703228	0.182709	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr8_-_93144366_93144366	0.182595	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_+_7574992_7574997	0.182586	SOX2.p2	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg18_v1_chr6_-_35804337_35804337	0.182263	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr1_-_21375939_21375975	0.182137	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr4_-_40631397_40631473	0.182109	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr2_+_158666627_158666627	0.181236	SOX2.p2	AK122743|UPP2|151531|uridine phosphorylase 2	NM_173355|UPP2|151531|uridine phosphorylase 2
hg18_v1_chr15_+_67393795_67393795	0.18017	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr21_-_39642712_39642807	0.180142	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr6_-_29120930_29120995	0.17981	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr6_+_44463418_44463538	0.179725	SOX2.p2	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	CR594844|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)
hg18_v1_chr10_-_105835525_105835573	0.179674	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg18_v1_chr15_-_97607108_97607350	0.179397	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr20_+_34287814_34287860	0.179386	SOX2.p2	BC001751|C20orf4|25980|chromosome 20 open reading frame 4	BC019311|C20orf4|25980|chromosome 20 open reading frame 4	NM_015511|C20orf4|25980|chromosome 20 open reading frame 4
hg18_v1_chr1_+_84646621_84646738	0.179292	SOX2.p2	AF333389|DNASE2B|58511|deoxyribonuclease II beta	NM_058248|DNASE2B|58511|deoxyribonuclease II beta	BC080621|DNASE2B|58511|deoxyribonuclease II beta	BC065182|DNASE2B|58511|deoxyribonuclease II beta
hg18_v1_chr12_-_94469357_94469393	0.178964	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg18_v1_chr1_+_36160375_36160517	0.178937	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr20_+_19818209_19818245	0.178889	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr10_-_64698831_64699011	0.178887	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg18_v1_chr4_-_170428768_170428823	0.178883	SOX2.p2	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chrX_+_139912421_139912524	0.17873	SOX2.p2	AF098307|SPANXB1|728695|SPANX family, member B1	AJ457796|SPANXF1|171490|SPANX family, member F1	NM_032461|SPANXB1|728695|SPANX family, member B1	NM_139019|SPANXF1|171490|SPANX family, member F1	NM_145664|SPANXB2|100133171|SPANX family, member B2	BC034472|SPANXB1|728695|SPANX family, member B1	BC137533|SPANXB1|728695|SPANX family, member B1	BC137536|SPANXB1|728695|SPANX family, member B1	DQ892330|SPANXB1|728695|SPANX family, member B1	DQ895534|SPANXB1|728695|SPANX family, member B1
hg18_v1_chrX_+_10084984_10085125	0.178499	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg18_v1_chr19_-_14800275_14800275	0.178249	SOX2.p2	NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5
hg18_v1_chr2_-_203484445_203484674	0.177975	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	CR589963|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	CR613990|WDR12|55759|WD repeat domain 12	CR622430|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg18_v1_chr17_+_54997667_54997871	0.177798	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr2_+_234624084_234624169	0.177747	SOX2.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg18_v1_chr13_-_29937966_29938021	0.177678	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr13_+_23742846_23742950	0.177562	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr17_+_24394043_24394043	0.177287	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr2_+_108637916_108637940	0.177168	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr7_+_73136042_73136082	0.177163	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr1_+_144004589_144004727	0.177015	SOX2.p2	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8	AY894565|NBPF10|100132406|neuroblastoma breakpoint family, member 10	AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8	NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10
hg18_v1_chr22_+_21852743_21852858	0.176935	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg18_v1_chr17_-_70039187_70039207	0.176848	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr2_+_11600238_11600266	0.176661	SOX2.p2	BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr13_-_38510183_38510220	0.17656	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr1_+_207668787_207668790	0.176448	SOX2.p2	NM_001104548|LOC642587|642587|NPC-A-5
hg18_v1_chr3_+_174598937_174598937	0.176053	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr5_+_140871107_140871323	0.17579	SOX2.p2	
hg18_v1_chr6_+_44295219_44295449	0.17566	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr10_+_102749222_102749254	0.175622	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr17_-_10362583_10362583	0.175549	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr16_-_4263001_4263026	0.175303	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr9_-_126945536_126945689	0.174676	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr19_+_9157269_9157269	0.173907	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg18_v1_chr7_+_77005287_77005321	0.173634	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr1_-_224563461_224563577	0.173143	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr3_-_47798308_47798336	0.173052	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr5_+_86599575_86599589	0.172904	SOX2.p2	
hg18_v1_chr6_+_34964999_34965157	0.172803	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg18_v1_chr1_-_205210567_205210592	0.172559	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr2_-_63518589_63518644	0.172433	SOX2.p2	BC093752|WDPCP|51057|WD repeat containing planar cell polarity effector	BC093754|WDPCP|51057|WD repeat containing planar cell polarity effector	BC143426|WDPCP|51057|WD repeat containing planar cell polarity effector	NM_001042692|WDPCP|51057|WD repeat containing planar cell polarity effector	AF131737|WDPCP|51057|WD repeat containing planar cell polarity effector
hg18_v1_chr14_+_51525942_51526067	0.172095	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr13_-_32658215_32658215	0.171694	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr17_-_41626032_41626140	0.17153	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr8_+_1940282_1940348	0.171299	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chr1_-_206484258_206484287	0.171059	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr19_+_10932792_10932856	0.170989	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr20_+_34287793_34287813	0.170808	SOX2.p2	CR590998|C20orf4|25980|chromosome 20 open reading frame 4	AL117419|C20orf4|25980|chromosome 20 open reading frame 4
hg18_v1_chr20_-_23381478_23381481	0.170757	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg18_v1_chr1_+_43539239_43539329	0.170516	SOX2.p2	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg18_v1_chr2_-_38683119_38683272	0.170267	SOX2.p2	CR600541|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr19_-_14121728_14121872	0.170119	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg18_v1_chr3_+_190990142_190990283	0.17007	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg18_v1_chr9_-_73715666_73715825	0.169943	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr12_+_43972732_43972732	0.169727	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr14_-_34413831_34413888	0.169599	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr2_+_173794692_173794736	0.169553	SOX2.p2	CR606268|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK
hg18_v1_chr6_-_29635456_29635489	0.168942	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg18_v1_chr18_+_30652223_30652409	0.168911	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	CR621250|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr7_-_126670804_126670804	0.168517	SOX2.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr6_+_26473376_26473487	0.168323	SOX2.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	CR626326|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg18_v1_chr1_-_23730298_23730299	0.168169	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr2_+_152899837_152899996	0.168124	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg18_v1_chr19_-_15451203_15451316	0.167353	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg18_v1_chr22_-_20314366_20314434	0.167096	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr14_-_72563497_72563672	0.166888	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg18_v1_chr17_+_38576707_38576790	0.166344	SOX2.p2	AK299328|NBR1|4077|neighbor of BRCA1 gene 1	AK290005|NBR1|4077|neighbor of BRCA1 gene 1	AK297425|NBR1|4077|neighbor of BRCA1 gene 1	X76952|NBR1|4077|neighbor of BRCA1 gene 1	NM_005899|NBR1|4077|neighbor of BRCA1 gene 1	BC009808|NBR1|4077|neighbor of BRCA1 gene 1	AY450308|NBR1|4077|neighbor of BRCA1 gene 1
hg18_v1_chr9_+_136358134_136358139	0.166294	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr15_-_57013092_57013155	0.166274	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr3_-_47798337_47798339	0.16615	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chrX_+_70359780_70359871	0.166092	SOX2.p2	NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa	BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa	AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa	BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa
hg18_v1_chr2_-_134042500_134042517	0.165826	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chr11_+_5925152_5925152	0.165197	SOX2.p2	NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3
hg18_v1_chr7_+_73506172_73506316	0.165154	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr7_+_26208532_26208632	0.164701	SOX2.p2	
hg18_v1_chr12_-_52827275_52827422	0.164601	SOX2.p2	
hg18_v1_chr1_+_216585298_216585370	0.164531	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr18_+_11841388_11841510	0.16451	SOX2.p2	NM_020412|CHMP1B|57132|chromatin modifying protein 1B	AK314068|CHMP1B|57132|chromatin modifying protein 1B	CR609374|CHMP1B|57132|chromatin modifying protein 1B	BC065933|CHMP1B|57132|chromatin modifying protein 1B	CR595824|CHMP1B|57132|chromatin modifying protein 1B	CR600805|CHMP1B|57132|chromatin modifying protein 1B	CR616002|CHMP1B|57132|chromatin modifying protein 1B	CR618865|CHMP1B|57132|chromatin modifying protein 1B	CR609924|CHMP1B|57132|chromatin modifying protein 1B	CR595721|CHMP1B|57132|chromatin modifying protein 1B	BC012733|CHMP1B|57132|chromatin modifying protein 1B	AF281064|CHMP1B|57132|chromatin modifying protein 1B	CR626295|CHMP1B|57132|chromatin modifying protein 1B
hg18_v1_chr2_-_213723298_213723302	0.164479	SOX2.p2	AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr4_+_95898098_95898161	0.16437	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg18_v1_chr12_+_48765300_48765461	0.164329	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr20_-_51633042_51633042	0.164263	SOX2.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr12_-_51173238_51173447	0.16406	SOX2.p2	BT006899|KRT6A|3853|keratin 6A	BC125058|KRT6A|3853|keratin 6A	BC139753|KRT6A|3853|keratin 6A	DQ890619|KRT6A|3853|keratin 6A	DQ893788|KRT6A|3853|keratin 6A	BC069269|KRT6A|3853|keratin 6A	BC008807|KRT6A|3853|keratin 6A	BC014152|KRT6A|3853|keratin 6A	AK299386|KRT6A|3853|keratin 6A	AK299428|KRT6A|3853|keratin 6A	AK301686|KRT6A|3853|keratin 6A	AK290245|KRT6A|3853|keratin 6A	NM_005554|KRT6A|3853|keratin 6A
hg18_v1_chr7_+_73136254_73136286	0.163411	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr13_-_28190961_28191149	0.163256	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chr3_-_47798341_47798346	0.163051	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr5_+_36644187_36644320	0.162985	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr5_-_150306298_150306335	0.162976	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg18_v1_chr5_-_16791346_16791495	0.162925	SOX2.p2	AK295736|MYO10|4651|myosin X
hg18_v1_chr9_-_40782062_40782111	0.162809	SOX2.p2	AK057375|ZNF658|26149|zinc finger protein 658	AK292150|ZNF658|26149|zinc finger protein 658	NM_033160|ZNF658|26149|zinc finger protein 658
hg18_v1_chr2_-_26058831_26058871	0.162624	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg18_v1_chr1_-_222688337_222688430	0.162507	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg18_v1_chr21_+_30895276_30895310	0.162469	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr19_+_10932713_10932718	0.162219	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr15_-_38188333_38188441	0.16205	SOX2.p2	BC060783|BMF|90427|Bcl2 modifying factor	BC070043|BMF|90427|Bcl2 modifying factor	NM_001003940|BMF|90427|Bcl2 modifying factor
hg18_v1_chr1_+_12900031_12900099	0.161794	SOX2.p2	BC144565|PRAMEF7|441871|PRAME family member 7	NM_001012277|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr5_+_147754467_147754532	0.161732	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg18_v1_chr2_-_151052391_151052429	0.161712	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	CR626467|RND3|390|Rho family GTPase 3	CR607069|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg18_v1_chr14_-_34252695_34252784	0.161669	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr3_+_161040343_161040432	0.161498	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr2_-_110231431_110231431	0.161014	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr10_+_74323344_74323535	0.160922	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg18_v1_chr5_+_86599350_86599533	0.160806	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr11_-_47467094_47467152	0.159852	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr4_+_14950657_14950709	0.159379	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg18_v1_chr7_+_37746520_37746520	0.159124	SOX2.p2	AY288420|GPR141|353345|G protein-coupled receptor 141	BC120951|GPR141|353345|G protein-coupled receptor 141	BC120952|GPR141|353345|G protein-coupled receptor 141	NM_181791|GPR141|353345|G protein-coupled receptor 141
hg18_v1_chr1_+_15964045_15964065	0.159068	SOX2.p2	NM_001024216|FBLIM1|54751|filamin binding LIM protein 1	DQ891730|FBLIM1|54751|filamin binding LIM protein 1	DQ894907|FBLIM1|54751|filamin binding LIM protein 1	AY180161|FBLIM1|54751|filamin binding LIM protein 1
hg18_v1_chr20_-_54534387_54534387	0.159052	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg18_v1_chr16_-_15095590_15095668	0.15899	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg18_v1_chr2_+_100453375_100453375	0.158662	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr20_-_3710060_3710112	0.158504	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg18_v1_chr22_+_21852699_21852728	0.158448	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg18_v1_chr17_-_45620911_45620925	0.158395	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr10_-_98263434_98263672	0.1583	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg18_v1_chr18_+_19848749_19848760	0.157868	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg18_v1_chr17_+_39654808_39654935	0.157857	SOX2.p2	
hg18_v1_chr5_-_111120817_111120853	0.157614	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr14_-_80475636_80475636	0.157571	SOX2.p2	NM_152446|C14orf145|145508|chromosome 14 open reading frame 145
hg18_v1_chr19_+_10932719_10932781	0.157464	SOX2.p2	CR612486|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	CR597216|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr1_+_945472_945544	0.157402	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg18_v1_chr20_-_48980858_48981403	0.157327	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg18_v1_chr12_+_51777684_51777705	0.157183	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg18_v1_chr2_-_98713862_98713994	0.157102	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr1_+_211190476_211190605	0.156541	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr11_-_1586190_1586268	0.156459	SOX2.p2	AY597812|KRTAP5-3|387266|keratin associated protein 5-3	AB126072|KRTAP5-3|387266|keratin associated protein 5-3	NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3
hg18_v1_chr6_+_36318922_36318957	0.155956	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg18_v1_chr1_-_199742841_199742863	0.155821	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr12_-_69289889_69289890	0.155321	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr9_+_115303527_115303677	0.155072	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr15_-_39973566_39973566	0.155031	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg18_v1_chr17_+_52688842_52689102	0.154982	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr12_-_11354620_11354635	0.15493	SOX2.p2	BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4	BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4	K03207|PRB4|5545|proline-rich protein BstNI subfamily 4	NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4	BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4
hg18_v1_chr12_-_47735373_47735373	0.154919	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr12_-_88573949_88574015	0.154818	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chr11_-_129689524_129689559	0.154632	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr14_-_22515725_22515826	0.154628	SOX2.p2	AK025567|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr10_-_5050191_5050206	0.154496	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr1_+_26896519_26896593	0.154493	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr5_+_78567604_78567690	0.154441	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr16_-_4262696_4262962	0.154289	SOX2.p2	X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR610803|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR605422|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr19_-_47623340_47623417	0.154248	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg18_v1_chr6_-_112682573_112682604	0.15417	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg18_v1_chr15_+_78483624_78483954	0.153991	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chr19_-_2901583_2901642	0.153702	SOX2.p2	
hg18_v1_chr2_+_26110888_26111054	0.15369	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg18_v1_chr1_+_89871212_89871230	0.153574	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr15_+_76517623_76517734	0.153429	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	CR593632|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr1_-_12830728_12830899	0.153319	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr8_+_7731402_7731402	0.153266	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr1_-_163680941_163681215	0.153057	SOX2.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr5_-_64813459_64813502	0.152972	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg18_v1_chr5_-_111120764_111120807	0.152551	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr1_-_154987904_154988027	0.152331	SOX2.p2	AK298342|HDGF|3068|hepatoma-derived growth factor	AK315514|HDGF|3068|hepatoma-derived growth factor	BC018991|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr9_+_136358145_136358298	0.1522	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr11_+_16716723_16716749	0.15196	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr1_+_165565006_165565121	0.151795	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr7_-_27125738_27125738	0.151413	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg18_v1_chr4_-_54119159_54119192	0.151151	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr2_-_75641535_75641575	0.150977	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A	CR615454|FAM176A|84141|family with sequence similarity 176, member A
hg18_v1_chr9_-_87904844_87904965	0.150927	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr11_+_129689536_129689628	0.150816	SOX2.p2	AK091840|FLJ34521|646383|hypothetical protein LOC646383
hg18_v1_chr15_+_88345612_88345774	0.150799	SOX2.p2	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg18_v1_chr21_-_34209897_34210027	0.150785	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg18_v1_chr6_+_152053323_152053425	0.150754	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr9_+_39874941_39874982	0.150743	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr4_+_141397889_141397889	0.150718	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg18_v1_chr6_+_41148869_41148938	0.150605	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr1_+_25629968_25630176	0.150538	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr8_-_139995417_139995435	0.150511	SOX2.p2	AF406780|COL22A1|169044|collagen, type XXII, alpha 1	NM_152888|COL22A1|169044|collagen, type XXII, alpha 1
hg18_v1_chr16_-_74086790_74086807	0.1505	SOX2.p2	
hg18_v1_chr4_-_24195274_24195275	0.150452	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr1_-_230717850_230717934	0.150389	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg18_v1_chr16_-_70591377_70591377	0.150261	SOX2.p2	AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3	NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3
hg18_v1_chr8_-_74821636_74821789	0.150228	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr3_+_142587973_142587983	0.150092	SOX2.p2	
hg18_v1_chr16_+_67017_67017	0.14969	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg18_v1_chr2_+_218790364_218790438	0.149668	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg18_v1_chr9_-_122728993_122728993	0.149585	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr5_-_137882303_137882450	0.14958	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr4_-_141294682_141294883	0.149485	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg18_v1_chr1_+_32777358_32777358	0.14919	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr10_+_105717459_105717495	0.148921	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr2_+_211050653_211050677	0.148889	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr15_-_47125788_47126069	0.148842	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr14_+_99329198_99329716	0.148629	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg18_v1_chr19_+_1200882_1200886	0.148563	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chr2_-_128285136_128285211	0.148541	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	CR591938|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg18_v1_chr20_-_49612574_49612574	0.148114	SOX2.p2	EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr19_+_60077360_60077557	0.147962	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg18_v1_chr10_+_11087280_11087303	0.147788	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr15_+_100163424_100163445	0.147632	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr11_+_55842358_55842358	0.147347	SOX2.p2	NM_001005202|OR8K3|219473|olfactory receptor, family 8, subfamily K, member 3
hg18_v1_chr12_-_11230809_11230809	0.147027	SOX2.p2	BC131742|TAS2R42|353164|taste receptor, type 2, member 42	NM_181429|TAS2R42|353164|taste receptor, type 2, member 42
hg18_v1_chr7_-_86526880_86526949	0.146908	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr2_+_176737050_176737050	0.146875	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg18_v1_chr8_-_74821610_74821633	0.146806	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|hypothetical protein LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr4_+_95347773_95347895	0.14677	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg18_v1_chr4_-_87989291_87989439	0.146714	SOX2.p2	AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6
hg18_v1_chr15_+_61122957_61123066	0.146457	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg18_v1_chr14_-_23090606_23090714	0.146453	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr2_+_88148413_88148516	0.146452	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr1_+_199975674_199975702	0.146313	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg18_v1_chr5_-_27074407_27074449	0.145902	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg18_v1_chr11_-_85103438_85103438	0.145884	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr3_+_137224266_137224350	0.145844	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg18_v1_chr3_+_161040439_161040667	0.145294	SOX2.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr14_-_68689623_68689713	0.144992	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr12_-_14858358_14858382	0.144946	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr6_-_33016561_33016824	0.144835	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr15_-_68177244_68177258	0.144603	SOX2.p2	CR603419|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_+_148711419_148711529	0.144486	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr1_+_109450116_109450221	0.144328	SOX2.p2	
hg18_v1_chr7_+_73136085_73136098	0.144325	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr5_+_71538456_71538583	0.144142	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr1_+_176748834_176748945	0.144119	SOX2.p2	AL136694|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49	NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49	NM_032126|C1orf49|84066|chromosome 1 open reading frame 49	AK093269|C1orf49|84066|chromosome 1 open reading frame 49	BC034972|C1orf49|84066|chromosome 1 open reading frame 49	AM392874|C1orf49|84066|chromosome 1 open reading frame 49	AM393664|C1orf49|84066|chromosome 1 open reading frame 49
hg18_v1_chr5_+_147628567_147628615	0.143882	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg18_v1_chr3_-_47798390_47798412	0.143139	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr7_-_150411504_150411571	0.143058	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr5_+_162862808_162862925	0.142854	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	CR622441|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta	CR596069|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr21_-_39642880_39642920	0.142837	SOX2.p2	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr1_-_210070736_210070771	0.142664	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr6_+_123142344_123142452	0.142592	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr7_+_120752656_120752656	0.14243	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg18_v1_chr21_-_33709037_33709120	0.142232	SOX2.p2	
hg18_v1_chr17_-_36507900_36507900	0.142138	SOX2.p2	NM_031960|KRTAP4-8|728224|keratin associated protein 4-8
hg18_v1_chr17_-_1359745_1359821	0.142107	SOX2.p2	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K
hg18_v1_chr17_-_37590910_37590995	0.141882	SOX2.p2	AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor	NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor
hg18_v1_chr15_-_32289480_32289554	0.141585	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr16_+_24459173_24459557	0.14144	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr14_-_104332895_104332940	0.14138	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr21_+_46094301_46094331	0.141322	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chr2_+_201384842_201384877	0.141244	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr14_-_102045749_102045823	0.14116	SOX2.p2	AK291868|ANKRD9|122416|ankyrin repeat domain 9	CR616439|ANKRD9|122416|ankyrin repeat domain 9	CR609368|ANKRD9|122416|ankyrin repeat domain 9
hg18_v1_chr1_-_198643885_198643899	0.141042	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr3_+_39424109_39424178	0.140996	SOX2.p2	CR605409|RPSA|3921|ribosomal protein SA	CR596726|RPSA|3921|ribosomal protein SA	CR615235|RPSA|3921|ribosomal protein SA	CR618689|RPSA|3921|ribosomal protein SA	BC071970|RPSA|3921|ribosomal protein SA	CR599703|RPSA|3921|ribosomal protein SA	CR620609|RPSA|3921|ribosomal protein SA	CR624266|RPSA|3921|ribosomal protein SA	J03799|RPSA|3921|ribosomal protein SA	NM_001012321|RPSA|3921|ribosomal protein SA	BC068062|RPSA|3921|ribosomal protein SA	BC008867|RPSA|3921|ribosomal protein SA	S37431|RPSA|3921|ribosomal protein SA	DQ891146|RPSA|3921|ribosomal protein SA	DQ894326|RPSA|3921|ribosomal protein SA	BT007219|RPSA|3921|ribosomal protein SA	X61156|RPSA|3921|ribosomal protein SA
hg18_v1_chr7_+_73506333_73506410	0.140917	SOX2.p2	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chrX_+_103243762_103243918	0.140837	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg18_v1_chr3_-_51976428_51976521	0.140686	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg18_v1_chr17_-_36533903_36533944	0.140589	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg18_v1_chr16_-_45422540_45422638	0.140538	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr2_-_183095308_183095751	0.140532	SOX2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr17_-_38979178_38979327	0.140326	SOX2.p2	AK315961|ETV4|2118|ets variant 4	U18018|ETV4|2118|ets variant 4	NM_001079675|ETV4|2118|ets variant 4
hg18_v1_chr6_-_135417522_135417641	0.140127	SOX2.p2	EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)	EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)	BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)	BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)
hg18_v1_chr17_-_27693246_27693394	0.140122	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	CR618435|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	CR599009|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg18_v1_chr8_-_7718769_7718821	0.140053	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr8_+_110415725_110415813	0.140015	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr10_+_11247449_11247455	0.139905	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr6_-_25679197_25679277	0.139816	SOX2.p2	
hg18_v1_chr2_+_1397186_1397187	0.139813	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg18_v1_chr15_-_76890626_76890985	0.139657	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg18_v1_chr18_+_18969724_18969724	0.13953	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg18_v1_chr1_-_31311349_31311391	0.139357	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr22_+_29696662_29696813	0.139284	SOX2.p2	
hg18_v1_chr2_+_198377561_198377670	0.139219	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr9_-_90456824_90456894	0.139001	SOX2.p2	BC101432|LOC286238|286238|hypothetical protein LOC286238	BC101439|LOC286238|286238|hypothetical protein LOC286238	BC101440|LOC286238|286238|hypothetical protein LOC286238	BC101442|LOC286238|286238|hypothetical protein LOC286238	AK098532|LOC286238|286238|hypothetical protein LOC286238	NM_001100111|LOC286238|286238|hypothetical protein LOC286238
hg18_v1_chr3_+_153469206_153469405	0.138973	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chrX_+_100111352_100111352	0.13894	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg18_v1_chr20_+_31541565_31541700	0.138785	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr6_-_32299757_32299821	0.138671	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg18_v1_chr21_-_39642808_39642873	0.138548	SOX2.p2	BC071643|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619497|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619783|HMGN1|3150|high-mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high-mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high-mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr5_+_102229425_102229434	0.138408	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg18_v1_chrX_-_128804972_128805241	0.13822	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr11_-_66201794_66201881	0.138066	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	CR614869|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr5_+_15553539_15553549	0.13799	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr5_+_161045235_161045235	0.137735	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg18_v1_chr2_-_55130925_55130945	0.137608	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg18_v1_chr12_+_51777715_51777773	0.137605	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	CR590705|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg18_v1_chr1_+_109221124_109221144	0.137331	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr6_-_75972473_75972528	0.137188	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg18_v1_chr6_+_29902734_29902734	0.137182	SOX2.p2	AK302054|HLA-G|3135|major histocompatibility complex, class I, G	NM_002127|HLA-G|3135|major histocompatibility complex, class I, G
hg18_v1_chr5_+_65053749_65053956	0.13703	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr6_+_26359805_26359857	0.136955	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg18_v1_chr12_-_11313907_11313907	0.136771	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chr11_-_55757236_55757312	0.136601	SOX2.p2	NM_001004746|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2	BC136876|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2
hg18_v1_chr4_+_17225344_17225384	0.136537	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	CR605440|MED28|80306|mediator complex subunit 28	CR618837|MED28|80306|mediator complex subunit 28	CR619532|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	CR607989|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg18_v1_chr5_-_176833197_176833256	0.136466	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr7_-_107667728_107667849	0.136431	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr10_-_29794484_29794630	0.136109	SOX2.p2	BX648589|SVIL|6840|supervillin
hg18_v1_chr6_-_48186868_48186901	0.136106	SOX2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg18_v1_chr10_+_53744043_53744200	0.136045	SOX2.p2	NM_012242|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AK314902|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR625465|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594616|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR601383|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603553|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	BC001539|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AY359005|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594190|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR595444|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603030|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR605923|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591735|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR600818|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR604811|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR610857|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF127563|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF177394|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591322|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)
hg18_v1_chr1_+_22107137_22107137	0.13589	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr1_+_149395728_149395781	0.135878	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chr2_+_36777336_36777365	0.135792	SOX2.p2	NM_001177969|VIT|5212|vitrin	NM_001177970|VIT|5212|vitrin	NM_001177971|VIT|5212|vitrin	NM_001177972|VIT|5212|vitrin	NM_053276|VIT|5212|vitrin	AK299426|VIT|5212|vitrin
hg18_v1_chr2_-_169927258_169927393	0.135778	SOX2.p2	U33837|LRP2|4036|low density lipoprotein receptor-related protein 2	AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2	NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2
hg18_v1_chr19_-_1603325_1603352	0.135774	SOX2.p2	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg18_v1_chr2_+_201384889_201384893	0.13564	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr5_-_95184221_95184464	0.135416	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr11_+_4965996_4966015	0.135345	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chr1_-_143708467_143708467	0.13531	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr7_-_122985060_122985193	0.135142	SOX2.p2	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	CR606314|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa
hg18_v1_chr4_-_26100986_26101181	0.13487	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg18_v1_chr8_+_7340777_7340877	0.134859	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg18_v1_chr1_+_945399_945413	0.134451	SOX2.p2	
hg18_v1_chr3_-_47798381_47798382	0.134105	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr5_+_133479196_133479325	0.134104	SOX2.p2	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)
hg18_v1_chr5_+_61637701_61637759	0.133997	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr4_-_54119102_54119112	0.133781	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr7_-_105106844_105106844	0.133723	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chrX_-_19598912_19599042	0.133616	SOX2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr4_-_152368492_152368631	0.133533	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr12_+_67366989_67367072	0.133474	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg18_v1_chr22_-_41672990_41672990	0.133474	SOX2.p2	BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2
hg18_v1_chr2_+_54537842_54537901	0.133407	SOX2.p2	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr14_-_21108714_21108714	0.133382	SOX2.p2	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3
hg18_v1_chr7_-_130443379_130443425	0.133331	SOX2.p2	BC047367|FLJ43663|378805|hypothetical LOC378805	CR622681|FLJ43663|378805|hypothetical LOC378805
hg18_v1_chr19_-_7896974_7897058	0.133155	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg18_v1_chr18_-_22699650_22699717	0.133109	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr16_-_74086779_74086782	0.132871	SOX2.p2	
hg18_v1_chr11_-_119104463_119104722	0.132833	SOX2.p2	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg18_v1_chr6_-_46401363_46401489	0.132827	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2	NM_005822|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr4_+_90252990_90252990	0.132676	SOX2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg18_v1_chr12_+_26096757_26096763	0.13264	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr3_-_47798372_47798376	0.13263	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr1_-_54644269_54644483	0.13257	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg18_v1_chr14_-_68689058_68689132	0.132505	SOX2.p2	AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr1_-_149698516_149698594	0.13246	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr2_+_208103068_208103073	0.132453	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr8_+_63324053_63324184	0.132321	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr17_-_37034288_37034407	0.132215	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	CR621616|KRT17|3872|keratin 17	CR600963|KRT17|3872|keratin 17	CR615020|KRT17|3872|keratin 17	CR603789|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	CR622158|KRT17|3872|keratin 17	CR598766|KRT17|3872|keratin 17	CR612161|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	CR608860|KRT17|3872|keratin 17	CR618671|KRT17|3872|keratin 17	CR621301|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	CR595280|KRT17|3872|keratin 17	CR599780|KRT17|3872|keratin 17	CR608685|KRT17|3872|keratin 17	CR598735|KRT17|3872|keratin 17	CR599390|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg18_v1_chr10_+_97461525_97461525	0.132036	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr3_-_14963943_14963978	0.132015	SOX2.p2	
hg18_v1_chr10_-_21475493_21475493	0.131769	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg18_v1_chr22_+_36422940_36422956	0.131723	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg18_v1_chr20_+_54533191_54533230	0.131624	SOX2.p2	CR624258|C20orf106|200232|chromosome 20 open reading frame 106	NM_001012971|C20orf106|200232|chromosome 20 open reading frame 106	BC029411|C20orf106|200232|chromosome 20 open reading frame 106	BC105792|C20orf107|388799|chromosome 20 open reading frame 107	BC107704|C20orf106|200232|chromosome 20 open reading frame 106	BC070179|C20orf106|200232|chromosome 20 open reading frame 106
hg18_v1_chr12_+_54132264_54132264	0.131578	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr2_+_232281491_232281663	0.131431	SOX2.p2	CR592067|PTMA|5757|prothymosin, alpha	CR595284|PTMA|5757|prothymosin, alpha	CR612313|PTMA|5757|prothymosin, alpha	CR617850|PTMA|5757|prothymosin, alpha	BC098420|PTMA|5757|prothymosin, alpha	BC070480|PTMA|5757|prothymosin, alpha	CR592101|PTMA|5757|prothymosin, alpha	CR597059|PTMA|5757|prothymosin, alpha	CR599711|PTMA|5757|prothymosin, alpha	CR611351|PTMA|5757|prothymosin, alpha	CR612721|PTMA|5757|prothymosin, alpha	CR616215|PTMA|5757|prothymosin, alpha	CR623981|PTMA|5757|prothymosin, alpha	BC003510|PTMA|5757|prothymosin, alpha	BC051265|PTMA|5757|prothymosin, alpha	CR605128|PTMA|5757|prothymosin, alpha	CR626005|PTMA|5757|prothymosin, alpha	BC071879|PTMA|5757|prothymosin, alpha	BC071647|PTMA|5757|prothymosin, alpha	CR602673|PTMA|5757|prothymosin, alpha	CR599993|PTMA|5757|prothymosin, alpha	CR621770|PTMA|5757|prothymosin, alpha	M26708|PTMA|5757|prothymosin, alpha	CR623382|PTMA|5757|prothymosin, alpha	CR623715|PTMA|5757|prothymosin, alpha	CR621405|PTMA|5757|prothymosin, alpha	M14483|PTMA|5757|prothymosin, alpha	CR593816|PTMA|5757|prothymosin, alpha	CR592291|PTMA|5757|prothymosin, alpha	BC066905|PTMA|5757|prothymosin, alpha	CR601616|PTMA|5757|prothymosin, alpha	M14794|PTMA|5757|prothymosin, alpha	DQ892963|PTMA|5757|prothymosin, alpha	DQ896210|PTMA|5757|prothymosin, alpha	AF348514|PTMA|5757|prothymosin, alpha	AY169282|PTMA|5757|prothymosin, alpha	CR619087|PTMA|5757|prothymosin, alpha	CR599378|PTMA|5757|prothymosin, alpha	CR600163|PTMA|5757|prothymosin, alpha
hg18_v1_chr2_+_237143118_237143220	0.131324	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7	CR616388|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg18_v1_chr10_+_92970302_92970474	0.131305	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr4_-_89963177_89963431	0.131217	SOX2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chr10_-_118419459_118419470	0.13106	SOX2.p2	AK097587|C10orf82|143379|chromosome 10 open reading frame 82	BC021737|C10orf82|143379|chromosome 10 open reading frame 82	NM_144661|C10orf82|143379|chromosome 10 open reading frame 82
hg18_v1_chr5_+_67558217_67558217	0.131035	SOX2.p2	M61906|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr1_+_110361634_110361667	0.130871	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr1_+_146824811_146824892	0.130697	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg18_v1_chr2_+_87828718_87828750	0.130661	SOX2.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chr1_-_166372526_166372562	0.130639	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr1_-_152431175_152431232	0.130607	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr11_+_4976788_4976788	0.130584	SOX2.p2	NM_001004755|OR51L1|119682|olfactory receptor, family 51, subfamily L, member 1
hg18_v1_chr14_-_21049204_21049346	0.130555	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	CR591863|METTL3|56339|methyltransferase like 3	CR613091|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	CR591477|METTL3|56339|methyltransferase like 3	CR593531|METTL3|56339|methyltransferase like 3	CR598589|METTL3|56339|methyltransferase like 3	CR621767|METTL3|56339|methyltransferase like 3	CR626750|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	CR600918|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	CR594281|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	CR590636|METTL3|56339|methyltransferase like 3	CR606689|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg18_v1_chr2_-_164300758_164300768	0.130522	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr9_-_72673753_72673808	0.130319	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg18_v1_chr10_+_80743769_80743922	0.130306	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr14_-_22825072_22825147	0.13005	SOX2.p2	AB037864|HOMEZ|57594|homeobox and leucine zipper encoding	AF463523|HOMEZ|57594|homeobox and leucine zipper encoding	AK296927|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr17_-_45621140_45621160	0.130001	SOX2.p2	
hg18_v1_chr4_-_158111504_158111830	0.129906	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr12_+_67919619_67919693	0.129857	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr19_+_40824486_40824534	0.129683	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg18_v1_chr13_+_45174446_45174446	0.12957	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr3_-_140741167_140741179	0.129566	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg18_v1_chr11_+_112337491_112337543	0.129529	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1	EU832805|NCAM1|4684|neural cell adhesion molecule 1	GQ129418|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr4_+_24923490_24923601	0.129353	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg18_v1_chr2_-_170389669_170389698	0.129145	SOX2.p2	CR609377|METTL5|29081|methyltransferase like 5
hg18_v1_chr2_+_201384904_201384907	0.12888	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr2_-_39310176_39310240	0.128869	SOX2.p2	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4	AY847283|CDKL4|344387|cyclin-dependent kinase-like 4	NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4	BC144460|CDKL4|344387|cyclin-dependent kinase-like 4
hg18_v1_chr11_+_65027721_65028452	0.128383	SOX2.p2	
hg18_v1_chr3_+_38322430_38322486	0.128332	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14
hg18_v1_chr9_-_124329392_124329392	0.128089	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg18_v1_chr13_+_112349358_112349358	0.128022	SOX2.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr16_-_87878249_87878666	0.127835	SOX2.p2	BC041585|ANKRD11|29123|ankyrin repeat domain 11
hg18_v1_chr4_-_54119123_54119147	0.127593	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr20_+_60558104_60558104	0.127473	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr1_-_13483073_13483141	0.127472	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr19_+_44785003_44785047	0.127393	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg18_v1_chr1_+_100088394_100088632	0.127256	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr16_+_3473476_3473618	0.127195	SOX2.p2	AK095819|NAT15|79903|N-acetyltransferase 15 (GCN5-related, putative)
hg18_v1_chr7_-_92615593_92615620	0.127187	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr20_+_21231921_21232030	0.127186	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg18_v1_chr7_+_101245812_101246047	0.126961	SOX2.p2	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1
hg18_v1_chr10_+_11247419_11247444	0.12657	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr9_-_128910132_128910214	0.126564	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg18_v1_chr13_+_51496679_51496827	0.126503	SOX2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg18_v1_chr4_+_78298326_78298709	0.126449	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr6_+_131936057_131936115	0.126437	SOX2.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr21_-_26345294_26345335	0.126176	SOX2.p2	
hg18_v1_chr6_+_12622286_12622290	0.126151	SOX2.p2	
hg18_v1_chr2_+_54536780_54537452	0.126124	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr7_-_150411345_150411502	0.126117	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr17_-_30414789_30414871	0.126031	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr9_-_135334003_135334096	0.125959	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg18_v1_chr12_-_120270035_120270066	0.125832	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg18_v1_chr2_-_171631728_171631728	0.125668	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chr6_+_139391511_139391550	0.125494	SOX2.p2	NM_021243|C6orf115|58527|chromosome 6 open reading frame 115	AF161398|C6orf115|58527|chromosome 6 open reading frame 115
hg18_v1_chr5_-_180099663_180099704	0.125433	SOX2.p2	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1	BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1
hg18_v1_chr3_+_42952855_42952887	0.125246	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr22_+_18091065_18091070	0.12516	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg18_v1_chr14_-_22358752_22358853	0.124979	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR617040|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR605487|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR601579|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
hg18_v1_chr3_+_156280338_156280398	0.124961	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr10_+_11247467_11247530	0.124754	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr15_+_83724743_83725047	0.124185	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chr19_-_40939756_40939798	0.124141	SOX2.p2	CR603021|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR607202|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR618274|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg18_v1_chr14_+_76362467_76362629	0.124106	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg18_v1_chr3_-_46761248_46761248	0.124036	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg18_v1_chr1_-_247086686_247086776	0.124017	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	CR613756|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg18_v1_chr7_+_96583840_96583840	0.123862	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr1_+_164063684_164063736	0.123828	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr9_-_37455250_37455271	0.123496	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr4_+_57469122_57469266	0.123328	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg18_v1_chr3_-_47932479_47932615	0.123326	SOX2.p2	
hg18_v1_chr17_+_59875623_59875900	0.123102	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr8_+_79591074_79591204	0.123058	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr9_+_35032222_35032262	0.122861	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr15_+_40427592_40427592	0.122693	SOX2.p2	NM_212465|CAPN3|825|calpain 3, (p94)
hg18_v1_chr2_-_98714020_98714070	0.122588	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr5_+_10406980_10407037	0.122388	SOX2.p2	
hg18_v1_chr20_-_10602139_10602269	0.122217	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chrX_+_1693940_1694067	0.122173	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg18_v1_chr6_-_31789824_31789829	0.121964	SOX2.p2	
hg18_v1_chr1_+_194887630_194887870	0.121916	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr16_-_30705707_30706089	0.121798	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg18_v1_chr11_-_6998041_6998161	0.121725	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg18_v1_chr2_-_27399405_27399488	0.121461	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg18_v1_chr10_+_92970487_92970541	0.121368	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr10_+_115501202_115501202	0.121321	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr14_+_19365447_19365447	0.121242	SOX2.p2	NM_001004723|OR4N2|390429|olfactory receptor, family 4, subfamily N, member 2
hg18_v1_chr20_+_9146036_9146081	0.121183	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr7_+_129771865_129771936	0.121113	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr2_+_1396239_1396285	0.121107	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg18_v1_chr1_+_100089118_100089186	0.120993	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr17_+_72795567_72795581	0.120586	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg18_v1_chr4_-_83569476_83569571	0.120547	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr11_-_66201894_66201973	0.120475	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B	CR591230|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr6_+_28237529_28237548	0.120466	SOX2.p2	CR611340|ZNF389|651302|zinc finger protein 389	NM_001145129|ZNF389|651302|zinc finger protein 389
hg18_v1_chr9_-_36391149_36391201	0.120457	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg18_v1_chr4_+_72321113_72321188	0.120456	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr16_-_4263056_4263076	0.120456	SOX2.p2	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr19_+_7566698_7566944	0.120393	SOX2.p2	BC035808|KIAA1543|57662|KIAA1543	NM_001080429|KIAA1543|57662|KIAA1543	NM_020902|KIAA1543|57662|KIAA1543	BC020431|KIAA1543|57662|KIAA1543
hg18_v1_chr1_-_116185215_116185271	0.120349	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr20_-_34925483_34925614	0.120324	SOX2.p2	NM_080627|KIAA0889|140710|KIAA0889
hg18_v1_chr1_-_180822686_180822730	0.120267	SOX2.p2	BC114433|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	BC115697|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
hg18_v1_chr11_-_123130435_123130462	0.120236	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg18_v1_chr1_-_23758871_23758908	0.120164	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr5_+_90711887_90711949	0.120005	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr13_+_97403929_97403948	0.119933	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg18_v1_chr4_-_139382672_139382956	0.119755	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr2_+_89715037_89715081	0.119749	SOX2.p2	
hg18_v1_chr14_-_68689284_68689573	0.11971	SOX2.p2	BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5	BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5	AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr1_+_150937463_150937463	0.119677	SOX2.p2	BC119707|LCE2A|353139|late cornified envelope 2A	BC127647|LCE2A|353139|late cornified envelope 2A	NM_178428|LCE2A|353139|late cornified envelope 2A
hg18_v1_chr9_+_112470871_112471004	0.119588	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr7_+_22733626_22733661	0.119363	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr4_+_71261066_71261135	0.119347	SOX2.p2	AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A	NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg18_v1_chr15_+_63609791_63609893	0.119072	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr2_+_89849009_89849038	0.118957	SOX2.p2	
hg18_v1_chr11_-_123030091_123030351	0.118874	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chr10_+_49184658_49184926	0.118625	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr9_+_115382760_115382760	0.118533	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr14_+_69307914_69308067	0.118466	SOX2.p2	CR622610|SRSF5|6430|serine/arginine-rich splicing factor 5
hg18_v1_chr12_+_5473558_5473641	0.118445	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr10_-_98326435_98326563	0.118426	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr1_+_159395853_159395911	0.118404	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr4_+_76868850_76869027	0.118307	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr15_-_62782470_62782502	0.118255	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr5_+_137542315_137542315	0.11825	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg18_v1_chr2_+_201384880_201384887	0.118119	SOX2.p2	CR624660|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr2_-_179367925_179367967	0.117925	SOX2.p2	X98114|TTN|7273|titin	X98115|TTN|7273|titin
hg18_v1_chr15_-_50316996_50317000	0.117828	SOX2.p2	AF161352|MYO5C|55930|myosin VC
hg18_v1_chr11_-_27637771_27637771	0.117748	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr6_+_116939500_116939528	0.117665	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr3_+_161877640_161877658	0.117539	SOX2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg18_v1_chrX_-_31436335_31436335	0.117231	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr6_-_25044156_25044168	0.117161	SOX2.p2	AK299047|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr5_+_98132898_98132985	0.117161	SOX2.p2	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr14_+_23610582_23610637	0.117102	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	CR598214|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg18_v1_chr16_-_70474912_70474944	0.116903	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr3_+_14835472_14835472	0.116888	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg18_v1_chr17_-_36451189_36451238	0.116499	SOX2.p2	AB055057|KRTAP1-1|81851|keratin associated protein 1-1	BC101152|KRTAP1-3|81850|keratin associated protein 1-3	AJ406926|KRTAP1-1|81851|keratin associated protein 1-1	BC105069|KRTAP1-1|81851|keratin associated protein 1-1	BC105071|KRTAP1-1|81851|keratin associated protein 1-1	BC069321|KRTAP1-1|81851|keratin associated protein 1-1	BC069450|KRTAP1-1|81851|keratin associated protein 1-1	AB052868|KRTAP1-1|81851|keratin associated protein 1-1	AB052934|KRTAP1-1|81851|keratin associated protein 1-1	NM_030967|KRTAP1-1|81851|keratin associated protein 1-1
hg18_v1_chr14_+_51526071_51526107	0.116452	SOX2.p2	CR594131|C14orf166|51637|chromosome 14 open reading frame 166	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr1_+_145841569_145841569	0.11644	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chr1_+_22650934_22651092	0.116153	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr19_+_44886785_44886981	0.116124	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr6_-_76259976_76260217	0.116041	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr9_-_35738875_35739029	0.115944	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr3_+_156280129_156280157	0.115939	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr7_+_141054621_141054621	0.115872	SOX2.p2	AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)	NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)
hg18_v1_chr12_+_53809731_53809819	0.115851	SOX2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr17_+_72376022_72376500	0.115469	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg18_v1_chr7_+_128795280_128795369	0.115288	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr20_-_29751755_29751762	0.114812	SOX2.p2	
hg18_v1_chr20_-_33658823_33658850	0.114596	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr1_-_149213778_149213809	0.114591	SOX2.p2	AK290989|LASS2|29956|LAG1 homolog, ceramide synthase 2	BC001357|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr5_-_138746917_138746937	0.114534	SOX2.p2	NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chr1_+_22252385_22252400	0.114469	SOX2.p2	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)
hg18_v1_chr3_-_49434874_49435015	0.11445	SOX2.p2	BC007546|AMT|275|aminomethyltransferase	AK293481|AMT|275|aminomethyltransferase	AK293594|AMT|275|aminomethyltransferase	AK294592|AMT|275|aminomethyltransferase	AK290600|AMT|275|aminomethyltransferase	AK301072|AMT|275|aminomethyltransferase	AK091738|AMT|275|aminomethyltransferase	BC094771|AMT|275|aminomethyltransferase	AK296177|AMT|275|aminomethyltransferase	AK096062|AMT|275|aminomethyltransferase	D13811|AMT|275|aminomethyltransferase
hg18_v1_chr12_-_7709734_7709768	0.114365	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg18_v1_chr3_+_184898234_184898398	0.11418	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chr21_+_30929425_30929453	0.114024	SOX2.p2	AB096957|KRTAP20-2|337976|keratin associated protein 20-2	BC111084|KRTAP20-2|337976|keratin associated protein 20-2	NM_181616|KRTAP20-2|337976|keratin associated protein 20-2
hg18_v1_chr4_-_68766392_68766392	0.113887	SOX2.p2	AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like	NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like
hg18_v1_chrX_-_103060777_103060803	0.113712	SOX2.p2	AK026512|LOC100128594|100128594|hypothetical LOC100128594
hg18_v1_chr8_+_98725505_98725602	0.113603	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr13_-_74953873_74954806	0.113589	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr13_-_73605914_73606066	0.113354	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr5_+_72148173_72148320	0.113283	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr3_-_47909001_47909068	0.113279	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg18_v1_chr17_-_36719030_36719030	0.113166	SOX2.p2	NM_001146182|KRTAP16-1|100288060|keratin associated protein 16-1
hg18_v1_chr11_+_120478584_120478584	0.113142	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chr3_-_14963980_14964102	0.112944	SOX2.p2	
hg18_v1_chr1_+_120055941_120056168	0.112865	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	CR617402|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	CR619716|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	CR592544|PHGDH|26227|phosphoglycerate dehydrogenase	CR611188|PHGDH|26227|phosphoglycerate dehydrogenase	CR622574|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	CR600485|PHGDH|26227|phosphoglycerate dehydrogenase	CR612347|PHGDH|26227|phosphoglycerate dehydrogenase	CR616251|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg18_v1_chr22_-_30071761_30071970	0.112787	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr3_-_113334657_113334841	0.112776	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	CR625820|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg18_v1_chr11_+_93678450_93678450	0.112688	SOX2.p2	NM_001080486|FOLR4|390243|folate receptor 4 (delta) homolog (mouse)
hg18_v1_chr9_+_81377419_81377592	0.112679	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr4_-_147079018_147079236	0.112663	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr6_+_139136349_139136621	0.112595	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	CR598704|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	CR626300|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A	CR612663|CCDC28A|25901|coiled-coil domain containing 28A	CR626831|CCDC28A|25901|coiled-coil domain containing 28A
hg18_v1_chr6_-_24827265_24827381	0.112379	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg18_v1_chr1_+_243065630_243065647	0.112164	SOX2.p2	
hg18_v1_chr16_+_31401939_31401939	0.111775	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg18_v1_chr15_+_32048380_32048380	0.111755	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr7_+_26644014_26644014	0.111624	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg18_v1_chr10_-_28611020_28611072	0.111593	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr4_-_75938710_75938905	0.111442	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg18_v1_chr14_-_105589467_105589979	0.111055	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr2_+_119416214_119416380	0.111033	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	CR603381|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	CR623903|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure	CR590986|MARCO|8685|macrophage receptor with collagenous structure	CR595006|MARCO|8685|macrophage receptor with collagenous structure	CR614449|MARCO|8685|macrophage receptor with collagenous structure
hg18_v1_chr1_-_21373816_21373837	0.110885	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr7_-_92300573_92300833	0.110708	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr21_-_15358996_15359180	0.110707	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr12_-_25041639_25041719	0.110562	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr10_-_28631850_28632026	0.110555	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr14_+_38653177_38653260	0.110397	SOX2.p2	AF027150|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_001009182|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_001009183|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_003616|SIP1|8487|survival of motor neuron protein interacting protein 1	BC028095|SIP1|8487|survival of motor neuron protein interacting protein 1	BC104968|SIP1|8487|survival of motor neuron protein interacting protein 1	AK313947|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037701|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037702|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037703|SIP1|8487|survival of motor neuron protein interacting protein 1
hg18_v1_chr1_+_67923331_67923550	0.110365	SOX2.p2	CR612719|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR608507|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR613302|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR623510|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR609553|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg18_v1_chr2_+_135312655_135312722	0.110357	SOX2.p2	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase
hg18_v1_chr6_-_33879734_33879770	0.11018	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr1_+_89871231_89871236	0.110173	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr2_+_170298700_170298767	0.110112	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr10_+_63331018_63331018	0.109918	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr11_-_46572073_46572149	0.109912	SOX2.p2	AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1	AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr9_+_126158935_126159046	0.109876	SOX2.p2	
hg18_v1_chr19_+_10932583_10932709	0.109758	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr1_+_149165438_149165548	0.109527	SOX2.p2	NM_001145415|SETDB1|9869|SET domain, bifurcated 1	NM_012432|SETDB1|9869|SET domain, bifurcated 1	AK302461|SETDB1|9869|SET domain, bifurcated 1	AK308335|SETDB1|9869|SET domain, bifurcated 1	BC028671|SETDB1|9869|SET domain, bifurcated 1	D31891|SETDB1|9869|SET domain, bifurcated 1	BC009362|SETDB1|9869|SET domain, bifurcated 1
hg18_v1_chr6_+_18495559_18495734	0.109516	SOX2.p2	AK096832|RNF144B|255488|ring finger protein 144B	NM_182757|RNF144B|255488|ring finger protein 144B	AB076367|RNF144B|255488|ring finger protein 144B	BC063311|RNF144B|255488|ring finger protein 144B	AL832329|RNF144B|255488|ring finger protein 144B
hg18_v1_chr7_+_156128431_156128481	0.109376	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg18_v1_chr16_+_87741416_87741478	0.109304	SOX2.p2	
hg18_v1_chr10_+_11247243_11247259	0.109108	SOX2.p2	AK316354|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr5_-_138746840_138746901	0.109097	SOX2.p2	AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chr7_+_73506047_73506154	0.108944	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr7_-_128337997_128338008	0.108868	SOX2.p2	AK122706|KCP|375616|kielin/chordin-like protein	NM_001135914|KCP|375616|kielin/chordin-like protein	NM_199349|KCP|375616|kielin/chordin-like protein
hg18_v1_chr5_+_61637822_61637857	0.108846	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr2_+_37425240_37425382	0.108689	SOX2.p2	CR608310|QPCT|25797|glutaminyl-peptide cyclotransferase	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase	CR596088|QPCT|25797|glutaminyl-peptide cyclotransferase	CR623589|QPCT|25797|glutaminyl-peptide cyclotransferase
hg18_v1_chr18_+_21967813_21967880	0.108585	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg18_v1_chr10_+_11087345_11087348	0.108555	SOX2.p2	AK299548|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr1_-_200380321_200380473	0.108487	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr9_-_32540818_32540908	0.108365	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr2_+_196229715_196229926	0.10817	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr1_+_1256585_1256588	0.107588	SOX2.p2	NM_152228|TAS1R3|83756|taste receptor, type 1, member 3
hg18_v1_chr12_-_105165805_105166150	0.10736	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr15_-_68177283_68177312	0.107254	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr2_-_152663748_152663838	0.10725	SOX2.p2	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr16_+_65620715_65620864	0.107241	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr2_+_3683660_3683684	0.107142	SOX2.p2	AK302299|ALLC|55821|allantoicase	NM_018436|ALLC|55821|allantoicase	BC029652|ALLC|55821|allantoicase
hg18_v1_chr6_+_167624792_167624941	0.107102	SOX2.p2	AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)	BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)	BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)	BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)
hg18_v1_chr14_-_87806913_87807026	0.107053	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr1_+_243065590_243065628	0.106952	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr21_-_31332665_31332665	0.10678	SOX2.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr4_+_47181987_47182188	0.10674	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg18_v1_chr8_-_93181091_93181091	0.106441	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_-_114593838_114593879	0.106431	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr10_+_102749597_102749676	0.106398	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr4_-_170428681_170428684	0.105971	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr11_-_10787157_10787248	0.105967	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr5_-_176833259_176833299	0.105912	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr1_+_243065537_243065589	0.105851	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr17_-_17421503_17421503	0.105836	SOX2.p2	AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase	NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg18_v1_chr20_-_29774258_29774397	0.105738	SOX2.p2	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg18_v1_chr13_-_38510246_38510261	0.10552	SOX2.p2	NM_025138|C13orf23|80209|chromosome 13 open reading frame 23	NM_170719|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr8_+_136539290_136539476	0.105479	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr10_-_63698463_63698627	0.105428	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr5_+_56545657_56545714	0.105391	SOX2.p2	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1	AL136844|GPBP1|65056|GC-rich promoter binding protein 1	AM392551|GPBP1|65056|GC-rich promoter binding protein 1	AM393442|GPBP1|65056|GC-rich promoter binding protein 1
hg18_v1_chr8_+_42315132_42315299	0.105331	SOX2.p2	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	CR624336|POLB|5423|polymerase (DNA directed), beta	CR623008|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	NM_002690|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg18_v1_chr2_+_181554048_181554097	0.104919	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr11_-_85115105_85115158	0.104341	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr14_-_34414241_34414276	0.104223	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr12_+_67919583_67919618	0.104209	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr1_-_52293634_52293634	0.104155	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr1_-_155834357_155834493	0.104121	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr17_-_53847937_53848133	0.103928	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg18_v1_chr16_-_15644465_15644523	0.103901	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg18_v1_chr14_+_22410795_22410927	0.103613	SOX2.p2	NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10	CR626435|LRP10|26020|low density lipoprotein receptor-related protein 10	AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10	BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10
hg18_v1_chr6_-_105957458_105957620	0.103164	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg18_v1_chr14_-_30927931_30927931	0.103041	SOX2.p2	BC045764|HEATR5A|25938|HEAT repeat containing 5A	NM_015473|HEATR5A|25938|HEAT repeat containing 5A
hg18_v1_chr1_+_243065215_243065449	0.102986	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr17_+_59205244_59205264	0.102957	SOX2.p2	
hg18_v1_chr9_-_96395828_96395895	0.102694	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg18_v1_chr17_+_27838821_27838926	0.10268	SOX2.p2	
hg18_v1_chr19_+_49180171_49180220	0.102482	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg18_v1_chr10_+_88718167_88718250	0.102426	SOX2.p2	NM_006829|C10orf116|10974|chromosome 10 open reading frame 116	AK312031|C10orf116|10974|chromosome 10 open reading frame 116	BC004471|C10orf116|10974|chromosome 10 open reading frame 116	D45370|C10orf116|10974|chromosome 10 open reading frame 116
hg18_v1_chr14_+_23175383_23175541	0.102423	SOX2.p2	CR610479|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR611371|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR624957|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR602571|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR621782|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg18_v1_chr12_-_94135154_94135581	0.102182	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg18_v1_chr5_-_75044001_75044035	0.102142	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr20_-_5048443_5048668	0.102065	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen	CR617056|PCNA|5111|proliferating cell nuclear antigen	CR619580|PCNA|5111|proliferating cell nuclear antigen
hg18_v1_chr21_-_18113514_18113589	0.101977	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg18_v1_chr17_+_24944605_24944652	0.101961	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg18_v1_chrX_+_48253007_48253152	0.101611	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr17_-_40865987_40866033	0.101372	SOX2.p2	AK290650|SH3D20|201175|SH3 domain containing 20
hg18_v1_chr11_-_10786095_10786206	0.101201	SOX2.p2	BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr3_-_47798423_47798599	0.101073	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr20_-_10602429_10602710	0.10101	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr11_+_20000938_20000990	0.100937	SOX2.p2	AK298346|NAV2|89797|neuron navigator 2	AJ488208|NAV2|89797|neuron navigator 2
hg18_v1_chr2_+_187163232_187163312	0.100907	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr5_-_142057692_142057818	0.100431	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr16_+_68238460_68238571	0.100398	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr6_-_75972286_75972465	0.100364	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg18_v1_chr6_+_4721825_4722015	0.1003	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr14_-_34414277_34414300	0.100101	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr16_-_3870686_3870712	0.10005	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg18_v1_chr10_+_118295417_118295594	0.0997973	SOX2.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg18_v1_chr1_+_42773146_42773146	0.0996102	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr20_+_31106797_31106890	0.0994765	SOX2.p2	BC113398|C20orf185|359710|chromosome 20 open reading frame 185	BC113400|C20orf185|359710|chromosome 20 open reading frame 185	AF549189|C20orf185|359710|chromosome 20 open reading frame 185	NM_182658|C20orf185|359710|chromosome 20 open reading frame 185
hg18_v1_chr14_-_26136799_26136858	0.0994693	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg18_v1_chr7_-_116854765_116854812	0.0993975	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr7_+_2638156_2638303	0.0993815	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr2_-_232034638_232034709	0.0993749	SOX2.p2	AK001314|NCL|4691|nucleolin
hg18_v1_chr12_-_122322117_122322775	0.099318	SOX2.p2	DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR604217|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR598800|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1
hg18_v1_chr6_+_64344307_64344831	0.0992374	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr5_+_125995304_125995312	0.0989896	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48
hg18_v1_chr5_+_132037271_132037271	0.0989803	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chr22_+_17799341_17799424	0.0988986	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg18_v1_chrX_+_41468351_41468377	0.0987936	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg18_v1_chr16_-_1404635_1404723	0.0987513	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg18_v1_chr8_+_70567581_70567605	0.0986806	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr16_-_4502980_4503124	0.0986424	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr4_+_187227302_187227344	0.0985118	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg18_v1_chr1_-_26105477_26105579	0.0984979	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr6_-_153000226_153000226	0.0984205	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr6_-_30136734_30136950	0.0982193	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	CR611202|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg18_v1_chr15_-_21483457_21483495	0.09815	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr11_+_26972244_26972306	0.0981227	SOX2.p2	CR602973|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr6_-_90119068_90119156	0.0980799	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr18_+_41448763_41448763	0.0980563	SOX2.p2	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2
hg18_v1_chr5_-_172976196_172976210	0.0980337	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr16_-_79668304_79668372	0.0979876	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg18_v1_chr21_+_29439768_29439794	0.0979577	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg18_v1_chr4_+_71986927_71987035	0.0978163	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr1_-_222688623_222688623	0.0976223	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg18_v1_chr5_-_111121150_111121364	0.0975512	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chrX_+_107174855_107174976	0.0973721	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg18_v1_chr3_-_48911231_48911440	0.0970958	SOX2.p2	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	CR620282|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	CR607188|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
hg18_v1_chr19_+_702108_702151	0.0970834	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg18_v1_chr5_-_95044415_95044469	0.097003	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr12_-_9159707_9159739	0.0969611	SOX2.p2	AK307832|A2M|2|alpha-2-macroglobulin	AK312482|A2M|2|alpha-2-macroglobulin	AB209614|A2M|2|alpha-2-macroglobulin
hg18_v1_chr4_-_47709717_47709717	0.0969448	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr6_+_142510094_142510104	0.0969274	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr2_-_176656935_176656935	0.0969211	SOX2.p2	NM_001080458|EVX2|344191|even-skipped homeobox 2
hg18_v1_chr11_+_58888460_58888507	0.0968186	SOX2.p2	BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1	NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1
hg18_v1_chr5_+_137701122_137701185	0.0967982	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr17_+_59205289_59205316	0.0967503	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg18_v1_chr12_+_27288344_27288438	0.0966871	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr1_+_154318954_154319041	0.0966759	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr2_+_12774264_12775144	0.096645	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr19_+_59705824_59705946	0.0965805	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg18_v1_chr12_+_68459015_68459087	0.0963842	SOX2.p2	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr3_-_113842350_113842363	0.0963134	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr1_-_27871306_27871346	0.0963118	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chr3_-_47798347_47798362	0.0962861	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr11_+_6998275_6998275	0.0961106	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg18_v1_chr20_+_10363949_10364004	0.0960916	SOX2.p2	BC020787|C20orf94|128710|chromosome 20 open reading frame 94	BC026094|C20orf94|128710|chromosome 20 open reading frame 94	NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94
hg18_v1_chr12_+_54611212_54611349	0.0960181	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	CR616473|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg18_v1_chr7_+_150321771_150321824	0.0960133	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr2_+_47021866_47021948	0.0960064	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg18_v1_chr3_-_161584137_161584247	0.0959414	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg18_v1_chr1_+_22650930_22650933	0.0958544	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr2_-_21081694_21081813	0.0958017	SOX2.p2	X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr1_+_109221271_109221349	0.0957798	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr6_+_108987703_108987742	0.0957792	SOX2.p2	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3	CR623727|FOXO3|2309|forkhead box O3
hg18_v1_chr6_+_131613196_131613400	0.0957676	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr8_-_101227203_101227274	0.0957656	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg18_v1_chr10_-_33264491_33264491	0.095649	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg18_v1_chr11_-_18504939_18505072	0.0955899	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chrX_+_11687655_11687681	0.0953004	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr6_-_90119158_90119160	0.094862	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr1_-_24112345_24112438	0.0947967	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg18_v1_chr11_+_112337411_112337422	0.0947821	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr4_+_57468847_57468993	0.0947779	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg18_v1_chr19_-_49725387_49725387	0.0946607	SOX2.p2	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20
hg18_v1_chr9_+_4829763_4829773	0.0945987	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg18_v1_chr9_+_115382990_115383028	0.094565	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr8_-_95556460_95556531	0.0945253	SOX2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr5_+_140494971_140495201	0.0942741	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr17_+_62803824_62803918	0.0941446	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg18_v1_chr8_-_93099040_93099083	0.0939522	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr20_+_11846536_11846579	0.0938975	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg18_v1_chr12_+_52132353_52132414	0.0936443	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	CR602496|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr5_+_139008091_139008137	0.0935936	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr6_+_35812836_35812836	0.0935499	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg18_v1_chr12_-_31368347_31368362	0.0935165	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr14_-_102045849_102045888	0.0934639	SOX2.p2	CR595580|ANKRD9|122416|ankyrin repeat domain 9	BX161460|ANKRD9|122416|ankyrin repeat domain 9	NM_152326|ANKRD9|122416|ankyrin repeat domain 9	CR621329|ANKRD9|122416|ankyrin repeat domain 9
hg18_v1_chr6_-_49820030_49820126	0.0934536	SOX2.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chr9_-_139262009_139262042	0.093434	SOX2.p2	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg18_v1_chr8_-_80842452_80842652	0.0934045	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr4_+_3341521_3341521	0.0933932	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr11_+_124294355_124294355	0.0933878	SOX2.p2	AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1
hg18_v1_chr6_+_57062760_57062787	0.0933591	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg18_v1_chr19_+_45564549_45564697	0.0933314	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr17_-_60088773_60088881	0.0933288	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr12_-_101835510_101835510	0.0932449	SOX2.p2	L47726|PAH|5053|phenylalanine hydroxylase	NM_000277|PAH|5053|phenylalanine hydroxylase	U49897|PAH|5053|phenylalanine hydroxylase
hg18_v1_chr17_-_45626967_45627122	0.0930773	SOX2.p2	
hg18_v1_chr5_+_40877053_40877346	0.0930767	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg18_v1_chrX_-_100801472_100801518	0.0930541	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg18_v1_chr16_-_10696285_10696302	0.0930398	SOX2.p2	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg18_v1_chr1_+_199742906_199743063	0.0930045	SOX2.p2	
hg18_v1_chr2_-_197165495_197165579	0.0929785	SOX2.p2	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr10_-_103864651_103864785	0.0929614	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg18_v1_chr13_+_48582389_48582525	0.0928858	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr6_-_10939095_10939097	0.092868	SOX2.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chr12_-_107745455_107745455	0.092839	SOX2.p2	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chr3_-_47798279_47798307	0.0928188	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr14_+_68728235_68728304	0.0928083	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr1_-_152445432_152445522	0.0927248	SOX2.p2	NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189	BC127710|C1orf189|388701|chromosome 1 open reading frame 189	BC130509|C1orf189|388701|chromosome 1 open reading frame 189
hg18_v1_chr7_+_141265085_141265144	0.0927238	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg18_v1_chr4_-_47678187_47678306	0.0926385	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chrX_+_142794838_142794838	0.09257	SOX2.p2	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg18_v1_chr7_+_129634935_129634953	0.0923936	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg18_v1_chr1_+_15963580_15963616	0.0923415	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg18_v1_chr6_+_30796121_30796122	0.0922598	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chr1_-_57204208_57204400	0.0921035	SOX2.p2	BC130575|C8B|732|complement component 8, beta polypeptide	M16973|C8B|732|complement component 8, beta polypeptide	AK292740|C8B|732|complement component 8, beta polypeptide	AK313382|C8B|732|complement component 8, beta polypeptide	BC020701|C8B|732|complement component 8, beta polypeptide	NM_000066|C8B|732|complement component 8, beta polypeptide	AK298425|C8B|732|complement component 8, beta polypeptide	AK316209|C8B|732|complement component 8, beta polypeptide	AK298444|C8B|732|complement component 8, beta polypeptide
hg18_v1_chr12_-_49763405_49763501	0.0918832	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr3_+_2528272_2528289	0.0918349	SOX2.p2	AK095729|CNTN4|152330|contactin 4
hg18_v1_chr4_+_38740246_38740246	0.0914237	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr3_-_153470022_153470049	0.0914115	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr6_+_79844267_79844292	0.091035	SOX2.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr6_+_39868770_39868843	0.0908822	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg18_v1_chr17_-_40866062_40866078	0.0907803	SOX2.p2	BC067345|SH3D20|201175|SH3 domain containing 20	NM_174919|SH3D20|201175|SH3 domain containing 20
hg18_v1_chr7_+_94130752_94130882	0.0907178	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr2_+_79201118_79201139	0.0905759	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr19_+_46207335_46207421	0.090567	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chr1_+_203463654_203463759	0.0905166	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr2_-_55131096_55131118	0.0904838	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chr13_-_109757442_109757578	0.090395	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr7_+_89681069_89681069	0.0903864	SOX2.p2	AF526382|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2	AY358267|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2	NM_001040666|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2
hg18_v1_chr11_-_128279670_128279809	0.0903704	SOX2.p2	DQ891644|C11orf45|219833|chromosome 11 open reading frame 45	DQ894833|C11orf45|219833|chromosome 11 open reading frame 45
hg18_v1_chr7_+_102340579_102340757	0.0902957	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr2_-_55131202_55131237	0.0902154	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr2_+_10180304_10180376	0.0901128	SOX2.p2	CR596700|RRM2|6241|ribonucleotide reductase M2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	CR604378|RRM2|6241|ribonucleotide reductase M2	CR625489|RRM2|6241|ribonucleotide reductase M2	CR602150|RRM2|6241|ribonucleotide reductase M2	CR609838|RRM2|6241|ribonucleotide reductase M2	CR621427|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	CR614990|RRM2|6241|ribonucleotide reductase M2	CR590959|RRM2|6241|ribonucleotide reductase M2	CR618451|RRM2|6241|ribonucleotide reductase M2	CR603461|RRM2|6241|ribonucleotide reductase M2	CR602054|RRM2|6241|ribonucleotide reductase M2	CR608076|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr2_-_153282104_153282229	0.0899918	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg18_v1_chr7_-_97439500_97439561	0.0899323	SOX2.p2	BC015431|MGC72080|389538|MGC72080 pseudogene	BC042035|MGC72080|389538|MGC72080 pseudogene
hg18_v1_chr14_-_68689574_68689620	0.0898031	SOX2.p2	BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr11_+_125730773_125730817	0.0897969	SOX2.p2	CR598875|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR616349|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR602167|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614162|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595606|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595607|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR624587|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614499|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr14_+_62740878_62741014	0.089729	SOX2.p2	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	NM_020663|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg18_v1_chr7_+_128795178_128795266	0.0895011	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr2_-_40532651_40532802	0.0894765	SOX2.p2	Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr8_+_145158432_145158594	0.0893978	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chrX_-_19918958_19919101	0.0893858	SOX2.p2	AY092822|LOC729609|729609|hypothetical LOC729609
hg18_v1_chr8_-_93184629_93184633	0.0893031	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_+_49185035_49185298	0.0892598	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr1_-_151280201_151280218	0.089229	SOX2.p2	BC093801|SPRR2D|6703|small proline-rich protein 2D	BC093803|SPRR2D|6703|small proline-rich protein 2D	BC120938|SPRR2D|6703|small proline-rich protein 2D	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg18_v1_chr15_-_62782427_62782469	0.0892217	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_203208456_203208508	0.0891692	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr10_+_122600843_122600927	0.0891145	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr1_+_13615388_13615388	0.0891103	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr7_+_116447527_116447676	0.0890429	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr12_-_28016182_28016182	0.0889786	SOX2.p2	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg18_v1_chr1_-_166372244_166372247	0.0889378	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr3_+_150065732_150065784	0.0888942	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg18_v1_chr16_-_74086426_74086426	0.088835	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg18_v1_chr4_-_77097582_77097589	0.088676	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg18_v1_chr8_+_145136155_145136217	0.0886174	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr6_-_49789204_49789257	0.0886102	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg18_v1_chr1_-_95165089_95165368	0.08858	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr1_+_190811479_190811584	0.0884484	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr2_-_128332143_128332160	0.0884466	SOX2.p2	CR597179|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr7_+_104539548_104539681	0.0884045	SOX2.p2	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)
hg18_v1_chr17_-_31369046_31369117	0.0883547	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg18_v1_chr14_+_64041257_64041295	0.0883082	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chrX_-_85189194_85189221	0.0882318	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr22_-_20314274_20314356	0.0882147	SOX2.p2	CR596616|YDJC|150223|YdjC homolog (bacterial)	CR597037|YDJC|150223|YdjC homolog (bacterial)	BC064568|YDJC|150223|YdjC homolog (bacterial)	CR590781|YDJC|150223|YdjC homolog (bacterial)	CR613078|YDJC|150223|YdjC homolog (bacterial)	CR614195|YDJC|150223|YdjC homolog (bacterial)	CR618402|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	CR620409|YDJC|150223|YdjC homolog (bacterial)	CR624561|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	CR613432|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	CR600451|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr11_-_46572160_46572199	0.0878382	SOX2.p2	AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr2_+_228064531_228064539	0.0877686	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr6_+_30796123_30796283	0.0877626	SOX2.p2	CR611118|TUBB|203068|tubulin, beta	CR619520|TUBB|203068|tubulin, beta	CR598285|TUBB|203068|tubulin, beta	CR600934|TUBB|203068|tubulin, beta	CR601607|TUBB|203068|tubulin, beta	CR604162|TUBB|203068|tubulin, beta	CR607031|TUBB|203068|tubulin, beta	CR611872|TUBB|203068|tubulin, beta	CR612751|TUBB|203068|tubulin, beta	CR613221|TUBB|203068|tubulin, beta	BC002347|TUBB|203068|tubulin, beta	BC007605|TUBB|203068|tubulin, beta	CR592478|TUBB|203068|tubulin, beta	CR596484|TUBB|203068|tubulin, beta	CR601013|TUBB|203068|tubulin, beta	CR604556|TUBB|203068|tubulin, beta	CR604712|TUBB|203068|tubulin, beta	CR605680|TUBB|203068|tubulin, beta	CR608598|TUBB|203068|tubulin, beta	CR608834|TUBB|203068|tubulin, beta	CR613167|TUBB|203068|tubulin, beta	CR615486|TUBB|203068|tubulin, beta	CR617111|TUBB|203068|tubulin, beta	CR621812|TUBB|203068|tubulin, beta	CR626833|TUBB|203068|tubulin, beta	CR603160|TUBB|203068|tubulin, beta	CR607608|TUBB|203068|tubulin, beta	CR620946|TUBB|203068|tubulin, beta	AB062393|TUBB|203068|tubulin, beta	CR604797|TUBB|203068|tubulin, beta	CR608670|TUBB|203068|tubulin, beta	CR610589|TUBB|203068|tubulin, beta	CR612988|TUBB|203068|tubulin, beta	CR615095|TUBB|203068|tubulin, beta	CR616894|TUBB|203068|tubulin, beta	CR617779|TUBB|203068|tubulin, beta	CR623850|TUBB|203068|tubulin, beta	BC001938|TUBB|203068|tubulin, beta	BC005838|TUBB|203068|tubulin, beta	CR594368|TUBB|203068|tubulin, beta	CR595266|TUBB|203068|tubulin, beta	CR595417|TUBB|203068|tubulin, beta	CR599452|TUBB|203068|tubulin, beta	CR601344|TUBB|203068|tubulin, beta	CR602045|TUBB|203068|tubulin, beta	CR619202|TUBB|203068|tubulin, beta	CR620593|TUBB|203068|tubulin, beta	CR620764|TUBB|203068|tubulin, beta	CR591865|TUBB|203068|tubulin, beta	CR620650|TUBB|203068|tubulin, beta	CR625193|TUBB|203068|tubulin, beta	CR605815|TUBB|203068|tubulin, beta	AF070561|TUBB|203068|tubulin, beta	AF070593|TUBB|203068|tubulin, beta	BC013374|TUBB|203068|tubulin, beta	NM_178014|TUBB|203068|tubulin, beta	BC021909|TUBB|203068|tubulin, beta	BC019924|TUBB|203068|tubulin, beta	BC062532|TUBB|203068|tubulin, beta	CR591614|TUBB|203068|tubulin, beta	CR601589|TUBB|203068|tubulin, beta	CR612875|TUBB|203068|tubulin, beta	CR618338|TUBB|203068|tubulin, beta	CR626769|TUBB|203068|tubulin, beta	CR592844|TUBB|203068|tubulin, beta	CR593906|TUBB|203068|tubulin, beta	CR604912|TUBB|203068|tubulin, beta	CR611048|TUBB|203068|tubulin, beta	CR594478|TUBB|203068|tubulin, beta	CR590449|TUBB|203068|tubulin, beta	CR615318|TUBB|203068|tubulin, beta	CR606296|TUBB|203068|tubulin, beta	CR613923|TUBB|203068|tubulin, beta	CR615817|TUBB|203068|tubulin, beta	CR605898|TUBB|203068|tubulin, beta	CR595241|TUBB|203068|tubulin, beta	CR611874|TUBB|203068|tubulin, beta	CR624717|TUBB|203068|tubulin, beta	CR613213|TUBB|203068|tubulin, beta	AK297489|TUBB|203068|tubulin, beta	CR600973|TUBB|203068|tubulin, beta	DQ891742|TUBB|203068|tubulin, beta	DQ891828|TUBB|203068|tubulin, beta	DQ894920|TUBB|203068|tubulin, beta	CR596111|TUBB|203068|tubulin, beta	V00599|TUBB|203068|tubulin, beta
hg18_v1_chr1_+_224317044_224317055	0.0877062	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr16_+_83349816_83349878	0.0876542	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chr15_-_68177280_68177282	0.0875715	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr11_+_4571844_4571844	0.0874091	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg18_v1_chr14_+_59782222_59782227	0.0873035	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr2_+_101981888_101981890	0.0872555	SOX2.p2	BC027733|IL1R2|7850|interleukin 1 receptor, type II	CR616861|IL1R2|7850|interleukin 1 receptor, type II	BC012346|IL1R2|7850|interleukin 1 receptor, type II	NM_173343|IL1R2|7850|interleukin 1 receptor, type II
hg18_v1_chr1_+_61319976_61320121	0.0871705	SOX2.p2	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr8_-_53484753_53484994	0.0871511	SOX2.p2	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg18_v1_chrX_+_65300803_65300931	0.087088	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chr3_-_69381995_69382005	0.0870204	SOX2.p2	AK295045|FRMD4B|23150|FERM domain containing 4B
hg18_v1_chr4_-_83771386_83771404	0.086939	SOX2.p2	CR621269|SCD5|79966|stearoyl-CoA desaturase 5
hg18_v1_chr4_+_154397975_154398004	0.0868433	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr5_-_39460787_39460855	0.0867136	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr11_+_111666133_111666228	0.0867027	SOX2.p2	
hg18_v1_chr21_+_38550739_38550860	0.0866759	SOX2.p2	D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15
hg18_v1_chr19_-_47498300_47498701	0.0866691	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr4_-_83569572_83569642	0.0866547	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr10_+_70609986_70610056	0.0865923	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg18_v1_chr2_-_189752575_189752849	0.0864275	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr5_+_137701601_137701713	0.0862635	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr14_-_44673408_44673417	0.0858002	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa	CR613618|FKBP3|2287|FK506 binding protein 3, 25kDa	CR599673|FKBP3|2287|FK506 binding protein 3, 25kDa	CR623899|FKBP3|2287|FK506 binding protein 3, 25kDa	CR610696|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr16_+_66902369_66902551	0.085763	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	CR604457|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg18_v1_chr3_+_153014550_153014639	0.0857107	SOX2.p2	NM_001086|AADAC|13|arylacetamide deacetylase (esterase)	L32179|AADAC|13|arylacetamide deacetylase (esterase)	BC020706|AADAC|13|arylacetamide deacetylase (esterase)	AK290628|AADAC|13|arylacetamide deacetylase (esterase)	CR624107|AADAC|13|arylacetamide deacetylase (esterase)	BC032309|AADAC|13|arylacetamide deacetylase (esterase)
hg18_v1_chr1_-_199742864_199742868	0.0856873	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr22_+_17012704_17012764	0.0856871	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr7_+_129720209_129720255	0.085592	SOX2.p2	AK290993|CPA4|51200|carboxypeptidase A4	NM_001163446|CPA4|51200|carboxypeptidase A4	NM_016352|CPA4|51200|carboxypeptidase A4	BC052289|CPA4|51200|carboxypeptidase A4	AK310933|CPA4|51200|carboxypeptidase A4	AK298553|CPA4|51200|carboxypeptidase A4	AK298550|CPA4|51200|carboxypeptidase A4	AK299023|CPA4|51200|carboxypeptidase A4	AY358699|CPA4|51200|carboxypeptidase A4	AF095719|CPA4|51200|carboxypeptidase A4
hg18_v1_chr12_-_7935010_7935061	0.0855683	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg18_v1_chr20_+_43478120_43478217	0.0854263	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR602801|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR620597|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR604599|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR619784|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg18_v1_chr16_+_65701284_65701426	0.0854227	SOX2.p2	AF176088|C16orf70|80262|chromosome 16 open reading frame 70	BC004556|C16orf70|80262|chromosome 16 open reading frame 70	NM_025187|C16orf70|80262|chromosome 16 open reading frame 70
hg18_v1_chr16_+_15644624_15644624	0.0853725	SOX2.p2	BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)
hg18_v1_chr6_+_64403631_64403667	0.0853309	SOX2.p2	AK055678|PHF3|23469|PHD finger protein 3
hg18_v1_chr8_-_70908130_70908178	0.0853248	SOX2.p2	CR596526|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr1_+_159395912_159396026	0.0852854	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr2_-_75641587_75641610	0.0851509	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg18_v1_chr17_+_75366524_75366628	0.0850557	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg18_v1_chr4_-_152366970_152367109	0.0850285	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr6_-_80001116_80001173	0.0850071	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR604353|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr17_+_17548888_17548959	0.0850015	SOX2.p2	
hg18_v1_chr4_-_54152480_54152522	0.0848373	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr4_+_151218862_151219088	0.0847898	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg18_v1_chr8_-_145136125_145136202	0.0843656	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr8_+_92330691_92330722	0.0843411	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr11_+_123945102_123945298	0.0842821	SOX2.p2	BC137194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	BC137197|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	NM_001005194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	AY726592|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1
hg18_v1_chr8_-_105670410_105670437	0.0842723	SOX2.p2	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr12_-_107551783_107551800	0.0841004	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chrX_+_152608159_152608159	0.0840071	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg18_v1_chr14_+_20222175_20222211	0.0839542	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr12_+_130004404_130004408	0.083905	SOX2.p2	BX649116|GPR133|283383|G protein-coupled receptor 133	NM_198827|GPR133|283383|G protein-coupled receptor 133
hg18_v1_chr7_-_84589182_84589182	0.083832	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg18_v1_chr6_-_83832139_83832316	0.0837952	SOX2.p2	CR590287|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR604323|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR598717|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg18_v1_chr1_+_240078655_240078762	0.0836859	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr11_+_10786137_10786218	0.083621	SOX2.p2	AK055888|LOC144017|144017|hypothetical protein LOC144017
hg18_v1_chr1_-_31311073_31311136	0.0836169	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr12_-_9159742_9159778	0.0835895	SOX2.p2	M11313|A2M|2|alpha-2-macroglobulin	BC040071|A2M|2|alpha-2-macroglobulin	AY591530|A2M|2|alpha-2-macroglobulin
hg18_v1_chr2_+_61146542_61146622	0.0835829	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr4_-_170428564_170428680	0.0833619	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr9_+_676640_676693	0.0833356	SOX2.p2	
hg18_v1_chrX_+_73557809_73558134	0.083309	SOX2.p2	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
hg18_v1_chr7_+_143043871_143043895	0.0832356	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg18_v1_chr12_+_6925997_6926000	0.0832077	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr22_-_48607449_48607521	0.0831113	SOX2.p2	AK304776|BRD1|23774|bromodomain containing 1
hg18_v1_chr2_+_128644510_128644524	0.0830219	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg18_v1_chr2_-_55130963_55131090	0.0830088	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg18_v1_chr5_+_139008209_139008493	0.0829997	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr10_+_95507555_95507717	0.0829466	SOX2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	CR621199|LGI1|9211|leucine-rich, glioma inactivated 1	CR621328|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg18_v1_chr10_+_35455806_35455963	0.0829091	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_-_181826292_181826381	0.0828378	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr6_-_56824672_56824674	0.0827485	SOX2.p2	AK299898|DST|667|dystonin
hg18_v1_chrX_+_100692071_100692244	0.0823224	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR616090|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg18_v1_chr14_-_44673418_44673495	0.0822067	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr19_+_46503524_46503529	0.0821925	SOX2.p2	CR621310|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr2_+_176724358_176724560	0.0821476	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg18_v1_chr12_+_119418215_119418286	0.0816324	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr7_-_148212230_148212291	0.0815703	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr7_+_94130673_94130691	0.0813471	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr8_+_145136226_145136304	0.0813395	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr12_+_6926014_6926149	0.0812841	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr12_-_120781002_120781151	0.0811952	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg18_v1_chr4_+_88562726_88563080	0.0811891	SOX2.p2	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR619203|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR626425|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR597296|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR620878|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR604538|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg18_v1_chr3_-_121117647_121117670	0.0811769	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr19_-_11311254_11311347	0.0811097	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg18_v1_chr13_-_98757634_98757749	0.0810673	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr6_-_32271868_32271902	0.0808997	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg18_v1_chr17_-_40339919_40339965	0.0808832	SOX2.p2	CR591619|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr5_-_121441805_121441860	0.080822	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg18_v1_chr2_+_208103001_208103051	0.0807202	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr7_+_94953148_94953310	0.0804356	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg18_v1_chr9_+_66197108_66197135	0.0804224	SOX2.p2	
hg18_v1_chr8_-_10550026_10550075	0.0803841	SOX2.p2	AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1	NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1	AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1
hg18_v1_chr22_+_29333069_29333351	0.0802473	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	CR604069|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II	CR590469|TCN2|6948|transcobalamin II
hg18_v1_chr13_-_102209422_102209422	0.0802379	SOX2.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chr19_+_39402167_39402274	0.080154	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr7_-_148212292_148212309	0.0801345	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr19_-_17275083_17275281	0.0801007	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	CR618792|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg18_v1_chr3_-_172227461_172227461	0.0800986	SOX2.p2	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2
hg18_v1_chr6_-_105957669_105957707	0.080058	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg18_v1_chr3_+_139200347_139200391	0.0799779	SOX2.p2	AK098474|CLDN18|51208|claudin 18	NM_001002026|CLDN18|51208|claudin 18	AF349452|CLDN18|51208|claudin 18
hg18_v1_chrX_+_107569671_107569809	0.0799672	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg18_v1_chr1_+_165075304_165075329	0.0798979	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr2_+_84597087_84597089	0.079875	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg18_v1_chr2_+_208102860_208102916	0.0798503	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr3_+_113060716_113060806	0.0798261	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg18_v1_chr1_+_15957832_15957896	0.0797774	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1	CR604326|FBLIM1|54751|filamin binding LIM protein 1
hg18_v1_chr2_+_85213884_85214457	0.0797693	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg18_v1_chr11_+_111552298_111552332	0.0796928	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr21_-_26029830_26029854	0.0796312	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chrX_+_12904207_12904321	0.0794955	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr11_-_5964790_5964790	0.0794386	SOX2.p2	BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1	NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1
hg18_v1_chr2_-_160838397_160838474	0.0794022	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr1_-_17179694_17179779	0.079245	SOX2.p2	BC028033|MFAP2|4237|microfibrillar-associated protein 2	CR619947|MFAP2|4237|microfibrillar-associated protein 2	CR597163|MFAP2|4237|microfibrillar-associated protein 2	AK222751|MFAP2|4237|microfibrillar-associated protein 2	CR590231|MFAP2|4237|microfibrillar-associated protein 2	BC015039|MFAP2|4237|microfibrillar-associated protein 2	NM_001135248|MFAP2|4237|microfibrillar-associated protein 2	NM_002403|MFAP2|4237|microfibrillar-associated protein 2
hg18_v1_chr4_-_104240413_104240485	0.0791685	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR601062|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR625169|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR599040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR605040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg18_v1_chr16_+_66464492_66464499	0.0791217	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr6_-_31740466_31740533	0.0790457	SOX2.p2	AF087962|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chr4_+_15292500_15292601	0.07903	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr2_+_166137091_166137100	0.0789407	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr21_+_32706615_32707032	0.0788923	SOX2.p2	CR604238|C21orf63|59271|chromosome 21 open reading frame 63	CR605246|C21orf63|59271|chromosome 21 open reading frame 63	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63	CR615783|C21orf63|59271|chromosome 21 open reading frame 63	BC038710|C21orf63|59271|chromosome 21 open reading frame 63	CR608560|C21orf63|59271|chromosome 21 open reading frame 63	CR608969|C21orf63|59271|chromosome 21 open reading frame 63	CR608735|C21orf63|59271|chromosome 21 open reading frame 63	AF358258|C21orf63|59271|chromosome 21 open reading frame 63	AY040087|C21orf63|59271|chromosome 21 open reading frame 63
hg18_v1_chr2_-_128332161_128332174	0.078758	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr5_+_176492629_176492643	0.0787242	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr7_-_148356664_148356688	0.0786942	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr6_+_41622267_41622363	0.0786698	SOX2.p2	BC052803|FOXP4|116113|forkhead box P4
hg18_v1_chr13_-_107317460_107317460	0.0786367	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr5_-_9683462_9683462	0.0786312	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg18_v1_chr11_+_112337199_112337216	0.078604	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr6_+_31791063_31791111	0.0784519	SOX2.p2	AJ315535|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315536|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315537|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	BC125138|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	NM_021246|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D
hg18_v1_chr17_-_26648375_26648505	0.0784319	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg18_v1_chr8_-_110415448_110415646	0.0783758	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr17_+_50699965_50700006	0.0782711	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg18_v1_chr6_+_16251260_16251318	0.0782391	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr2_+_3605611_3605640	0.0779562	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg18_v1_chr11_-_118166797_118166889	0.0779165	SOX2.p2	BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr3_+_29297806_29298130	0.0778718	SOX2.p2	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chrX_-_43717864_43717864	0.077835	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr10_+_17310475_17310610	0.0777954	SOX2.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr17_-_74432800_74433047	0.0777068	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr1_-_95165037_95165086	0.0777068	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg18_v1_chr10_-_92671005_92671011	0.0776572	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr12_+_119418294_119418298	0.0776134	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr8_+_98725604_98725667	0.0775934	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg18_v1_chr14_-_105206106_105206249	0.0775404	SOX2.p2	
hg18_v1_chr1_+_12958129_12958135	0.0774686	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22
hg18_v1_chr2_+_208102937_208102995	0.0774321	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr20_-_19984685_19984689	0.0773746	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg18_v1_chr13_+_75108450_75108493	0.0771901	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg18_v1_chr19_-_60941551_60941579	0.0771645	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr10_-_30356344_30356531	0.0771489	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg18_v1_chr6_+_64403668_64403683	0.0770894	SOX2.p2	AK307869|PHF3|23469|PHD finger protein 3
hg18_v1_chr1_-_26197121_26197234	0.0770503	SOX2.p2	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	CR597579|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg18_v1_chr1_+_50347176_50347181	0.0770052	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr20_+_1194959_1194998	0.0769675	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg18_v1_chrX_-_47815944_47815944	0.076848	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chr5_+_175725050_175725140	0.0768042	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg18_v1_chr2_-_128285214_128285238	0.0767535	SOX2.p2	BC005401|WDR33|55339|WD repeat domain 33	NM_001006622|WDR33|55339|WD repeat domain 33	NM_001006623|WDR33|55339|WD repeat domain 33	NM_018383|WDR33|55339|WD repeat domain 33
hg18_v1_chr1_+_181871830_181872100	0.0767291	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr1_-_153109349_153109391	0.0764454	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr1_+_100590595_100590615	0.0764069	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr7_+_106897737_106897740	0.0763953	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr17_-_60088637_60088652	0.076322	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr6_+_88026338_88026428	0.0761961	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chr1_+_36121403_36121609	0.0761748	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr9_+_74326536_74326536	0.0760584	SOX2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg18_v1_chr21_-_38792173_38792297	0.0759536	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr9_-_139564656_139564806	0.0759237	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr1_+_203503214_203503300	0.0758495	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr9_+_107464558_107464598	0.0756131	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr15_-_84139182_84139216	0.075504	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr1_-_31311140_31311218	0.0754716	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr10_+_35455986_35456061	0.0753904	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chr11_-_101292462_101292462	0.0753354	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg18_v1_chr5_-_77880731_77880827	0.0753352	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr9_-_74169649_74170191	0.0752551	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr6_-_91063181_91063284	0.0751833	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr2_+_160180092_160180108	0.0751799	SOX2.p2	CR604974|LOC643072|643072|hypothetical LOC643072
hg18_v1_chr5_+_15553736_15553760	0.0751188	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr12_-_30721410_30721444	0.075106	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr9_-_74735669_74735747	0.0749978	SOX2.p2	CR601139|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg18_v1_chr5_-_138238877_138238886	0.0748629	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr3_-_48576204_48576225	0.0748603	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg18_v1_chr1_+_224317062_224317110	0.0748401	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr22_+_20316968_20317085	0.0746951	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg18_v1_chr1_-_172258129_172258147	0.0746345	SOX2.p2	
hg18_v1_chr19_-_6230797_6230809	0.0744297	SOX2.p2	
hg18_v1_chr6_+_47774247_47774260	0.0743733	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg18_v1_chr1_-_149213751_149213773	0.0743214	SOX2.p2	BC010032|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr5_-_39430180_39430277	0.0742824	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr5_+_69356827_69357015	0.0742531	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr11_+_56187713_56187737	0.0742502	SOX2.p2	BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1	NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1
hg18_v1_chr16_-_45562840_45562859	0.0742366	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg18_v1_chr15_-_62782512_62782532	0.0742074	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr5_-_16989290_16989367	0.0742012	SOX2.p2	BC050682|MYO10|4651|myosin X	BC041694|MYO10|4651|myosin X	BC108736|MYO10|4651|myosin X	BC032669|MYO10|4651|myosin X
hg18_v1_chr5_+_82803248_82803499	0.0741872	SOX2.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg18_v1_chr1_-_1701313_1701367	0.0741055	SOX2.p2	AF250320|NADK|65220|NAD kinase	NM_001198994|NADK|65220|NAD kinase
hg18_v1_chr14_-_23623657_23623673	0.0740592	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper
hg18_v1_chr12_+_52132154_52132169	0.0740583	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr14_+_38719462_38719593	0.0740432	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr17_-_24302450_24302462	0.0738852	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg18_v1_chr1_+_148305965_148306062	0.0738299	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg18_v1_chr6_+_53043729_53043729	0.0737356	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr17_+_55854636_55854687	0.0735773	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg18_v1_chr7_-_99899829_99899829	0.07353	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg18_v1_chr12_+_27288475_27288503	0.0734926	SOX2.p2	CR602115|STK38L|23012|serine/threonine kinase 38 like	AK304755|STK38L|23012|serine/threonine kinase 38 like	CR606717|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr15_-_35179650_35180047	0.0734568	SOX2.p2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2	AK056216|MEIS2|4212|Meis homeobox 2
hg18_v1_chr3_+_176059763_176059805	0.0733549	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr11_+_125730760_125730771	0.0731882	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr16_+_64958060_64958063	0.0731837	SOX2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr3_-_145049853_145050062	0.0729476	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr11_+_119701047_119701047	0.0728724	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr5_+_65408500_65408622	0.0728504	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr1_-_153107084_153107166	0.0728187	SOX2.p2	
hg18_v1_chr5_+_72504778_72504796	0.0727321	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg18_v1_chr11_+_125730822_125730878	0.0726962	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr2_+_167468220_167468220	0.0726922	SOX2.p2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2
hg18_v1_chr11_-_27679617_27679755	0.0726367	SOX2.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr3_-_186454509_186454579	0.0726128	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg18_v1_chr2_+_200879040_200879649	0.0726037	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr13_+_33290254_33290315	0.0725852	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr2_+_46779553_46779602	0.0724618	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr8_-_110762409_110762409	0.0722284	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr16_+_67131161_67131161	0.0720794	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr2_-_104834344_104834352	0.0720699	SOX2.p2	AK096498|LOC100506421|100506421|hypothetical LOC100506421
hg18_v1_chr12_-_49763566_49763715	0.0720367	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr20_+_29309127_29309127	0.0720133	SOX2.p2	DQ012019|DEFB115|245929|defensin, beta 115	NM_001037730|DEFB115|245929|defensin, beta 115
hg18_v1_chr22_+_23945611_23945611	0.0719794	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg18_v1_chr21_-_31049566_31049616	0.0719015	SOX2.p2	NM_181619|KRTAP21-1|337977|keratin associated protein 21-1	AB096960|KRTAP21-1|337977|keratin associated protein 21-1	BC105029|KRTAP21-1|337977|keratin associated protein 21-1	BC105031|KRTAP21-1|337977|keratin associated protein 21-1
hg18_v1_chr2_-_20375497_20375564	0.0718751	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr11_-_121492010_121492132	0.0718535	SOX2.p2	BC130361|BLID|414899|BH3-like motif containing, cell death inducer	BC130363|BLID|414899|BH3-like motif containing, cell death inducer	AF303179|BLID|414899|BH3-like motif containing, cell death inducer	NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer
hg18_v1_chr11_+_6898780_6898808	0.07185	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg18_v1_chrX_-_50573759_50573943	0.0718499	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg18_v1_chr6_+_144227265_144227265	0.0717117	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr5_-_39460687_39460730	0.0715706	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr8_+_61753912_61754132	0.0715214	SOX2.p2	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7	BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7	BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7	BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7	BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7	CR602498|CHD7|55636|chromodomain helicase DNA binding protein 7
hg18_v1_chr2_+_11212990_11213015	0.0714946	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr15_-_88148538_88148610	0.071457	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr19_+_10515570_10515590	0.0713762	SOX2.p2	AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr20_+_30409649_30410014	0.0713046	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg18_v1_chr4_+_123380569_123380579	0.0711697	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr2_-_39517633_39517794	0.0711679	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr20_+_30161173_30161231	0.0711561	SOX2.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg18_v1_chr7_-_99517128_99517398	0.0711274	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	CR616475|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg18_v1_chr6_-_132875858_132876029	0.0710901	SOX2.p2	U77942|STX7|8417|syntaxin 7	CR596095|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	CR615646|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	CR607128|STX7|8417|syntaxin 7	CR618907|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg18_v1_chr19_-_56223095_56223101	0.0710818	SOX2.p2	AB013730|KLK11|11012|kallikrein-related peptidase 11	BC022068|KLK11|11012|kallikrein-related peptidase 11	NM_001167605|KLK11|11012|kallikrein-related peptidase 11	NM_006853|KLK11|11012|kallikrein-related peptidase 11
hg18_v1_chr2_+_220017617_220017638	0.07107	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg18_v1_chr2_+_234265059_234265086	0.071042	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg18_v1_chr6_-_53121540_53121585	0.0710352	SOX2.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg18_v1_chr3_-_11660395_11660398	0.0710179	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr2_+_68548173_68548364	0.0708782	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg18_v1_chr1_-_181826086_181826277	0.0707871	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	CR593013|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr2_+_149119029_149119117	0.0706483	SOX2.p2	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)
hg18_v1_chr5_-_121441866_121441878	0.0706343	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg18_v1_chr11_-_10786875_10787026	0.0706271	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr19_+_4353658_4353775	0.0705166	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg18_v1_chr13_+_109935250_109935280	0.0704697	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg18_v1_chr14_+_68727946_68727967	0.0704403	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr1_+_40688360_40688414	0.0703999	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr12_+_62523648_62524339	0.0702753	SOX2.p2	
hg18_v1_chr16_+_75790849_75790876	0.0702309	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr12_-_52407470_52407573	0.0702218	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg18_v1_chr5_+_140583098_140583262	0.0701114	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg18_v1_chr1_-_153444304_153444342	0.0700746	SOX2.p2	CR590329|THBS3|7059|thrombospondin 3	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3
hg18_v1_chr16_+_66433712_66433720	0.0699277	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg18_v1_chr10_+_63331401_63331474	0.0697068	SOX2.p2	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr2_+_48698440_48698518	0.0696611	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg18_v1_chr1_-_166149867_166150076	0.0696376	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg18_v1_chrX_+_47114925_47115010	0.0696243	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg18_v1_chr11_+_94398069_94398069	0.0696048	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg18_v1_chr8_-_101384633_101384662	0.0691644	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr17_-_36792161_36792180	0.0690558	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg18_v1_chr19_-_57181862_57181914	0.0690538	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg18_v1_chr1_+_182287388_182287578	0.0690533	SOX2.p2	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR612120|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR606046|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR620942|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
hg18_v1_chr10_-_69661860_69661860	0.0690002	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr12_+_8557402_8557595	0.0689281	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg18_v1_chr1_+_182040837_182040991	0.0689266	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr17_-_21097170_21097348	0.068837	SOX2.p2	AK126856|C17orf103|256302|chromosome 17 open reading frame 103	NM_152914|C17orf103|256302|chromosome 17 open reading frame 103	BC029527|C17orf103|256302|chromosome 17 open reading frame 103
hg18_v1_chr4_+_154345039_154345071	0.0688325	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr5_+_140546839_140547077	0.0688077	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg18_v1_chr5_+_140537554_140537613	0.0687823	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg18_v1_chr12_+_108020305_108020514	0.0686597	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr1_+_211190631_211190661	0.0685504	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg18_v1_chr12_-_120218857_120218924	0.0684728	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr2_-_55131124_55131138	0.0684495	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr1_-_51660328_51660380	0.0682121	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr14_+_68727968_68728043	0.0680122	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr5_+_177415181_177415187	0.0675106	SOX2.p2	
hg18_v1_chr8_+_98725670_98725908	0.0674262	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	CR606229|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg18_v1_chr17_-_74432671_74432750	0.0674186	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr5_-_36036883_36036886	0.0674029	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg18_v1_chr15_-_96875133_96875133	0.0673644	SOX2.p2	AK097062|FAM169B|283777|family with sequence similarity 169, member B	NM_182562|FAM169B|283777|family with sequence similarity 169, member B
hg18_v1_chr2_+_216695062_216695162	0.067071	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr4_-_83569853_83570272	0.0670384	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr7_+_44754700_44754715	0.0670036	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr2_-_210744158_210744432	0.0668741	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr4_+_1842947_1843045	0.066788	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr11_+_26972203_26972234	0.0666717	SOX2.p2	NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr17_+_25828546_25828573	0.0666498	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg18_v1_chr7_-_55897938_55897975	0.0666472	SOX2.p2	AK301928|SEPT14|346288|septin 14	NM_207366|SEPT14|346288|septin 14
hg18_v1_chr1_+_165075345_165075394	0.0665128	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr17_+_71232370_71232378	0.066495	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg18_v1_chr11_+_100063061_100063616	0.0664672	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr17_+_23723113_23723156	0.0662625	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr16_-_66535457_66535572	0.0662474	SOX2.p2	M26268|LCAT|3931|lecithin-cholesterol acyltransferase	BT009748|LCAT|3931|lecithin-cholesterol acyltransferase	BC014781|LCAT|3931|lecithin-cholesterol acyltransferase	NM_000229|LCAT|3931|lecithin-cholesterol acyltransferase
hg18_v1_chr8_+_79590890_79590890	0.0661258	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr3_+_38238080_38238094	0.0660847	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr15_-_53822468_53822569	0.0660662	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr7_-_148356697_148356714	0.0660633	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr7_-_13997389_13997398	0.0660556	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg18_v1_chr1_+_40486159_40486226	0.0660414	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	CR613757|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg18_v1_chr6_-_31960735_31960765	0.0660352	SOX2.p2	CR624754|EHMT2|10919|euchromatic histone-lysine N-methyltransferase 2
hg18_v1_chr1_-_203985896_203985931	0.065948	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr2_+_10180145_10180275	0.0659169	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr3_-_57288019_57288019	0.0659156	SOX2.p2	AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14	BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr18_+_27425727_27425863	0.0659118	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg18_v1_chr10_+_98730977_98731137	0.0657822	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg18_v1_chr2_+_148318520_148318654	0.065723	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr7_+_142885087_142885087	0.0656387	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg18_v1_chr17_-_16413188_16413254	0.065601	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg18_v1_chr12_-_113326085_113326089	0.0655696	SOX2.p2	NM_080718|TBX5|6910|T-box 5	U80987|TBX5|6910|T-box 5	U89353|TBX5|6910|T-box 5	EU446658|TBX5|6910|T-box 5
hg18_v1_chr15_-_93671314_93671332	0.0655105	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr11_-_125055884_125056151	0.0654636	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1	NM_020109|ACRV1|56|acrosomal vesicle protein 1	NM_020110|ACRV1|56|acrosomal vesicle protein 1	NM_020111|ACRV1|56|acrosomal vesicle protein 1	NM_020113|ACRV1|56|acrosomal vesicle protein 1	NM_020115|ACRV1|56|acrosomal vesicle protein 1
hg18_v1_chr2_+_86800940_86801065	0.0654045	SOX2.p2	AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr5_-_83052606_83052775	0.0653023	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr6_+_39868116_39868119	0.0652467	SOX2.p2	
hg18_v1_chr22_-_30018329_30018519	0.0652175	SOX2.p2	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR623813|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR608796|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR626709|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR612619|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR612099|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg18_v1_chr22_-_37481403_37481418	0.0652136	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr4_-_186693574_186693705	0.0651354	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	CR605535|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	CR622133|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg18_v1_chr5_-_34078991_34079127	0.0651247	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg18_v1_chr11_-_65962836_65962889	0.0650342	SOX2.p2	CR600024|MRPL11|65003|mitochondrial ribosomal protein L11	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	CR622463|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg18_v1_chr1_-_68470585_68470905	0.0648736	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	CR624611|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg18_v1_chr21_-_29179482_29179586	0.0647922	SOX2.p2	CR612892|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	CR620576|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg18_v1_chr12_+_27288446_27288462	0.0647337	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr10_-_14412813_14412900	0.0645978	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr11_+_93940121_93940331	0.0645023	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg18_v1_chr12_-_10142779_10142930	0.0644686	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr9_-_74169445_74169645	0.0644103	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr4_+_160408447_160408447	0.0642154	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chrX_-_10495476_10495642	0.0640997	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr9_+_129066576_129066681	0.0640973	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg18_v1_chr5_-_138238953_138238963	0.0640661	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr4_+_106693225_106693237	0.0640249	SOX2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg18_v1_chr11_-_76862197_76862764	0.0640129	SOX2.p2	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg18_v1_chr10_+_69314944_69314966	0.0639811	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr16_-_8870343_8870379	0.0639775	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg18_v1_chr10_+_35934343_35934343	0.0639435	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg18_v1_chr11_+_16716751_16716970	0.0639021	SOX2.p2	BC103747|C11orf58|10944|chromosome 11 open reading frame 58	AK315382|C11orf58|10944|chromosome 11 open reading frame 58	BC007103|C11orf58|10944|chromosome 11 open reading frame 58	BC016352|C11orf58|10944|chromosome 11 open reading frame 58	BC020937|C11orf58|10944|chromosome 11 open reading frame 58	CR602799|C11orf58|10944|chromosome 11 open reading frame 58	CR592723|C11orf58|10944|chromosome 11 open reading frame 58	CR614521|C11orf58|10944|chromosome 11 open reading frame 58	CR606236|C11orf58|10944|chromosome 11 open reading frame 58	CR602558|C11orf58|10944|chromosome 11 open reading frame 58	CR623569|C11orf58|10944|chromosome 11 open reading frame 58	CR600300|C11orf58|10944|chromosome 11 open reading frame 58	CR616149|C11orf58|10944|chromosome 11 open reading frame 58	CR614900|C11orf58|10944|chromosome 11 open reading frame 58	U51678|C11orf58|10944|chromosome 11 open reading frame 58	CR456882|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr2_-_55131176_55131197	0.0638404	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr21_-_31012965_31012965	0.0638273	SOX2.p2	AB180042|KRTAP21-3|100288323|keratin associated protein 21-3	NM_001164435|KRTAP21-3|100288323|keratin associated protein 21-3
hg18_v1_chr20_+_43895802_43895965	0.0637946	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg18_v1_chr7_-_99536214_99536321	0.0637478	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr1_+_198263352_198263633	0.0637458	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg18_v1_chr4_+_25931745_25931815	0.0637324	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr15_-_21483503_21483548	0.0636981	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chr3_-_57557906_57558115	0.0636059	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	CR591617|ARF4|378|ADP-ribosylation factor 4	CR611234|ARF4|378|ADP-ribosylation factor 4	CR595935|ARF4|378|ADP-ribosylation factor 4	CR597516|ARF4|378|ADP-ribosylation factor 4	CR607207|ARF4|378|ADP-ribosylation factor 4	CR611196|ARF4|378|ADP-ribosylation factor 4	CR622582|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	CR615713|ARF4|378|ADP-ribosylation factor 4	CR607867|ARF4|378|ADP-ribosylation factor 4	CR596585|ARF4|378|ADP-ribosylation factor 4	CR618819|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg18_v1_chr11_+_5667494_5667687	0.0635975	SOX2.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr6_-_99957253_99957290	0.0635448	SOX2.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr6_+_12825022_12825037	0.0634018	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr3_-_188935363_188935388	0.0633563	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr2_-_55413253_55413327	0.0632348	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chr9_+_138341752_138341823	0.063073	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg18_v1_chr1_-_53010929_53010933	0.0629518	SOX2.p2	
hg18_v1_chr8_-_18915443_18915690	0.0629317	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr2_-_73860609_73860793	0.0628426	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg18_v1_chr2_-_27432781_27432890	0.0627779	SOX2.p2	BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg18_v1_chr12_+_52132151_52132153	0.0626123	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr20_+_30160952_30161108	0.0625207	SOX2.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg18_v1_chr1_-_203985752_203985779	0.0625005	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr13_-_40491405_40491482	0.0624066	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr7_-_157054403_157054504	0.0623519	SOX2.p2	CR590102|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR596761|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR604034|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg18_v1_chr10_-_92670764_92670828	0.0623403	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr11_+_128069340_128069364	0.0622706	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr12_+_63090008_63090082	0.0622617	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr18_-_35634247_35634285	0.0622367	SOX2.p2	AK090603|LOC647946|647946|hypothetical LOC647946
hg18_v1_chr16_+_67723988_67724019	0.062222	SOX2.p2	NM_032830|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr10_+_13243553_13243595	0.0621286	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr17_-_53387493_53387857	0.0620778	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg18_v1_chr6_+_148705421_148705491	0.0620778	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr7_+_93373755_93373755	0.0620718	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg18_v1_chr1_-_52293356_52293476	0.0620495	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR593611|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR612587|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR622088|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR611104|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr19_-_59516155_59516220	0.062043	SOX2.p2	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
hg18_v1_chr5_+_137231443_137231447	0.0620189	SOX2.p2	NM_001135940|MYOT|9499|myotilin	NM_006790|MYOT|9499|myotilin	AK300088|MYOT|9499|myotilin
hg18_v1_chr9_-_137938778_137939187	0.0620152	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg18_v1_chr6_-_105957651_105957651	0.0619935	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg18_v1_chr1_-_154988647_154988863	0.061906	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr21_-_33935883_33936029	0.0618525	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr22_-_40666168_40666168	0.0618381	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg18_v1_chr1_+_151873174_151873354	0.0615178	SOX2.p2	AF318362|C1orf77|26097|chromosome 1 open reading frame 77	AK095230|C1orf77|26097|chromosome 1 open reading frame 77	AK308713|C1orf77|26097|chromosome 1 open reading frame 77	AK309844|C1orf77|26097|chromosome 1 open reading frame 77	CR612307|C1orf77|26097|chromosome 1 open reading frame 77	BC120961|C1orf77|26097|chromosome 1 open reading frame 77	BC120962|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr15_-_62782399_62782413	0.0615014	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_219141761_219141921	0.0614234	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg18_v1_chr19_+_48792383_48792383	0.061399	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg18_v1_chr1_+_945331_945388	0.0613338	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg18_v1_chr11_+_4799126_4799191	0.0613278	SOX2.p2	BC136877|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2	NM_001004753|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2
hg18_v1_chr2_+_11600287_11600301	0.0612712	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr9_-_113561613_113561633	0.0612273	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr2_-_157890400_157890661	0.0611403	SOX2.p2	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg18_v1_chr3_-_153541468_153541468	0.0611226	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr17_-_34811377_34811475	0.0611175	SOX2.p2	BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20	DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20
hg18_v1_chr10_-_1769669_1769717	0.0610772	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg18_v1_chr1_-_20985677_20985733	0.0610307	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr10_+_35456095_35456188	0.0610249	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_+_226404037_226404283	0.061008	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa	BC035840|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg18_v1_chr3_-_115960807_115960813	0.0609976	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr12_-_9159780_9159787	0.0609116	SOX2.p2	BC026246|A2M|2|alpha-2-macroglobulin	BX647329|A2M|2|alpha-2-macroglobulin	CR749334|A2M|2|alpha-2-macroglobulin
hg18_v1_chr7_-_80386258_80386482	0.0608546	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg18_v1_chr18_+_3443771_3443771	0.0607756	SOX2.p2	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr11_-_5946299_5946299	0.0606867	SOX2.p2	NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5
hg18_v1_chr14_-_37133927_37133988	0.0606252	SOX2.p2	AM392863|FOXA1|3169|forkhead box A1	AM393239|FOXA1|3169|forkhead box A1	AM393310|FOXA1|3169|forkhead box A1	AM393369|FOXA1|3169|forkhead box A1	BC033890|FOXA1|3169|forkhead box A1
hg18_v1_chr15_+_38673734_38673778	0.0605687	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr15_+_29406335_29406925	0.0605623	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg18_v1_chr1_+_1836125_1836125	0.0605453	SOX2.p2	AF490905|CALML6|163688|calmodulin-like 6	AY566229|CALML6|163688|calmodulin-like 6	NM_138705|CALML6|163688|calmodulin-like 6
hg18_v1_chr10_-_103864579_103864639	0.0605438	SOX2.p2	AK300588|LDB1|8861|LIM domain binding 1
hg18_v1_chr17_+_69875140_69875239	0.0605336	SOX2.p2	BC143807|GPR142|350383|G protein-coupled receptor 142	AB196530|GPR142|350383|G protein-coupled receptor 142	AY288421|GPR142|350383|G protein-coupled receptor 142	NM_181790|GPR142|350383|G protein-coupled receptor 142
hg18_v1_chr4_-_158111995_158112023	0.060472	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr20_-_44151924_44151938	0.060439	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr16_-_87646856_87646885	0.0604319	SOX2.p2	
hg18_v1_chr16_-_30010705_30010791	0.0603084	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg18_v1_chr11_+_43622348_43622372	0.0603029	SOX2.p2	
hg18_v1_chr3_-_158704056_158704108	0.0602149	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr9_+_122923864_122923914	0.0602089	SOX2.p2	AK090600|CEP110|11064|centrosomal protein 110kDa	BC002932|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr16_+_66433882_66434085	0.0602006	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg18_v1_chr18_+_54681657_54682014	0.0601176	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr11_+_112337299_112337384	0.0600154	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr3_+_185515543_185515977	0.060008	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr14_+_19513442_19513517	0.0600065	SOX2.p2	BC140726|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15	NM_001005486|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15
hg18_v1_chr5_+_110455768_110455948	0.0599618	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg18_v1_chr12_+_123023521_123023844	0.0599118	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg18_v1_chr20_-_33793286_33793437	0.0598806	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr3_-_126325132_126325158	0.0598584	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr12_+_47162552_47162552	0.0598537	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg18_v1_chr5_-_121441910_121441958	0.0598201	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr7_+_22733290_22733406	0.0597818	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	CR590965|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr5_-_76418661_76418937	0.0596805	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg18_v1_chr16_-_67723971_67723975	0.0596137	SOX2.p2	AF525164|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK000407|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr1_-_199259447_199259462	0.0594739	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr16_+_66464519_66464536	0.0593942	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr22_-_30071565_30071686	0.0593538	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr10_+_97505398_97505662	0.0593214	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr14_-_59264044_59264183	0.0593182	SOX2.p2	DQ355431|RTN1|6252|reticulon 1	L10334|RTN1|6252|reticulon 1	NM_206857|RTN1|6252|reticulon 1
hg18_v1_chr11_+_93394025_93394025	0.0593085	SOX2.p2	NM_001098672|HEPHL1|341208|hephaestin-like 1
hg18_v1_chr6_-_33862690_33862696	0.0592872	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg18_v1_chr4_-_107508040_107508040	0.0592728	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg18_v1_chr12_-_9159789_9159861	0.0591346	SOX2.p2	NM_000014|A2M|2|alpha-2-macroglobulin
hg18_v1_chr7_-_92585205_92585234	0.0590976	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg18_v1_chr5_+_180399871_180399971	0.0590964	SOX2.p2	AK298113|BTNL9|153579|butyrophilin-like 9	BC062459|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr18_-_27518392_27518683	0.0590771	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg18_v1_chr6_-_139737477_139737477	0.0590766	SOX2.p2	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr12_-_107551694_107551713	0.059033	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr1_+_153445629_153445679	0.0589845	SOX2.p2	CR605982|MTX1|4580|metaxin 1	CR614718|MTX1|4580|metaxin 1	BC035616|MTX1|4580|metaxin 1	CR591813|MTX1|4580|metaxin 1	CR619225|MTX1|4580|metaxin 1
hg18_v1_chr22_+_28329649_28330080	0.0589407	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg18_v1_chr16_-_73858179_73858207	0.0589291	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr2_+_48610567_48610684	0.0588717	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg18_v1_chr6_-_152999678_152999793	0.0588667	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr3_+_43303005_43303141	0.0588638	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr5_+_139008139_139008197	0.0588019	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr19_+_12941431_12941474	0.0587292	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5
hg18_v1_chr13_+_31503436_31503446	0.0586965	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg18_v1_chr1_+_99884018_99884485	0.0586439	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr17_+_51585834_51585837	0.0585442	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg18_v1_chr14_+_51396799_51396881	0.0584255	SOX2.p2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr20_+_31783426_31783488	0.0584177	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341
hg18_v1_chr8_+_12847521_12847553	0.0583757	SOX2.p2	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg18_v1_chr8_+_38704860_38704860	0.0582642	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr22_+_34107051_34107086	0.0582448	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	CR623301|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	CR603909|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr14_-_23846904_23846989	0.0581983	SOX2.p2	CR611009|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr9_-_96442351_96442367	0.0581287	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr14_-_20642629_20642702	0.058112	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg18_v1_chr7_+_68702516_68702532	0.0581097	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg18_v1_chr12_+_61240542_61240614	0.058004	SOX2.p2	AK022671|MON2|23041|MON2 homolog (S. cerevisiae)
hg18_v1_chr5_-_95184121_95184197	0.0579075	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	CR618562|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)	CR611519|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr6_-_2696152_2696198	0.0578078	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg18_v1_chr1_-_67292286_67292443	0.0578036	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr16_-_88613287_88613514	0.0577922	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr2_+_172530120_172530246	0.0577777	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chrX_+_21960841_21961051	0.0577538	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg18_v1_chrX_+_49104714_49104724	0.0577362	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894127|GAGE1|2543|G antigen 1	DQ894341|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr2_+_204279442_204279608	0.0577188	SOX2.p2	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg18_v1_chr10_+_49562866_49562926	0.057716	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr5_+_132021763_132021816	0.0576925	SOX2.p2	BC096138|IL13|3596|interleukin 13	BC096139|IL13|3596|interleukin 13	BC096140|IL13|3596|interleukin 13	BC096141|IL13|3596|interleukin 13	NM_002188|IL13|3596|interleukin 13	X69079|IL13|3596|interleukin 13	L06801|IL13|3596|interleukin 13	AF043334|IL13|3596|interleukin 13
hg18_v1_chr15_+_66133625_66133708	0.0576342	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr19_-_50964336_50964336	0.0575965	SOX2.p2	NM_175875|SIX5|147912|SIX homeobox 5
hg18_v1_chr6_+_134800533_134800550	0.0574837	SOX2.p2	AK055166|LOC154092|154092|hypothetical LOC154092
hg18_v1_chr1_-_199742589_199742589	0.0574669	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr7_+_136849104_136849182	0.0574607	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr11_+_118497484_118497545	0.057352	SOX2.p2	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	CR599076|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg18_v1_chr5_+_156540425_156540565	0.0573312	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg18_v1_chr1_-_33585848_33585919	0.05732	SOX2.p2	
hg18_v1_chr2_-_178461710_178461711	0.0571762	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr17_+_70520339_70520405	0.0571648	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg18_v1_chr10_-_79298876_79298954	0.0571574	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg18_v1_chr22_+_34107087_34107166	0.0571092	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	CR611539|HMOX1|3162|heme oxygenase (decycling) 1	CR612068|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	CR617367|HMOX1|3162|heme oxygenase (decycling) 1	CR590034|HMOX1|3162|heme oxygenase (decycling) 1	CR595835|HMOX1|3162|heme oxygenase (decycling) 1	CR598003|HMOX1|3162|heme oxygenase (decycling) 1	CR600636|HMOX1|3162|heme oxygenase (decycling) 1	CR601640|HMOX1|3162|heme oxygenase (decycling) 1	CR605543|HMOX1|3162|heme oxygenase (decycling) 1	CR611293|HMOX1|3162|heme oxygenase (decycling) 1	CR612044|HMOX1|3162|heme oxygenase (decycling) 1	CR615878|HMOX1|3162|heme oxygenase (decycling) 1	CR615893|HMOX1|3162|heme oxygenase (decycling) 1	CR617513|HMOX1|3162|heme oxygenase (decycling) 1	CR622130|HMOX1|3162|heme oxygenase (decycling) 1	CR623799|HMOX1|3162|heme oxygenase (decycling) 1	CR625550|HMOX1|3162|heme oxygenase (decycling) 1	CR626132|HMOX1|3162|heme oxygenase (decycling) 1	CR592402|HMOX1|3162|heme oxygenase (decycling) 1	CR596243|HMOX1|3162|heme oxygenase (decycling) 1	CR615425|HMOX1|3162|heme oxygenase (decycling) 1	CR615434|HMOX1|3162|heme oxygenase (decycling) 1	CR623238|HMOX1|3162|heme oxygenase (decycling) 1	CR594865|HMOX1|3162|heme oxygenase (decycling) 1	CR624289|HMOX1|3162|heme oxygenase (decycling) 1	CR615696|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr17_-_7086369_7086464	0.0571079	SOX2.p2	CR457043|GABARAP|11337|GABA(A) receptor-associated protein	CR542235|GABARAP|11337|GABA(A) receptor-associated protein	CR624246|GABARAP|11337|GABA(A) receptor-associated protein	CR592433|GABARAP|11337|GABA(A) receptor-associated protein	BC106748|GABARAP|11337|GABA(A) receptor-associated protein	BC106749|GABARAP|11337|GABA(A) receptor-associated protein	CR597728|GABARAP|11337|GABA(A) receptor-associated protein	AF161586|GABARAP|11337|GABA(A) receptor-associated protein	AF044671|GABARAP|11337|GABA(A) receptor-associated protein
hg18_v1_chrX_+_71280758_71280758	0.0570881	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg18_v1_chr5_-_32424352_32424402	0.0569425	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr13_+_36291306_36291493	0.0569273	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg18_v1_chr17_-_53420473_53420593	0.056913	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chrX_-_106846253_106846366	0.0569118	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	CR600468|TSC22D3|1831|TSC22 domain family, member 3	CR622973|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr6_-_79844503_79844573	0.0568922	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr4_-_113777470_113777521	0.056841	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr15_+_66133709_66133721	0.0567781	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr4_-_106849252_106849329	0.0567702	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg18_v1_chr2_+_48610796_48610862	0.0567572	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr1_+_168767864_168767990	0.0567104	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr9_+_122890394_122890425	0.0567065	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr11_+_66952462_66952607	0.0566832	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593942|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR602192|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604258|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR605830|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR618047|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622954|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR599694|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622329|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593441|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604667|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR612509|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR597985|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR613481|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg18_v1_chr1_-_198644111_198644212	0.0565437	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg18_v1_chr7_+_113853790_113853942	0.0564557	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr7_-_44854188_44854200	0.0564398	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg18_v1_chr14_-_22634134_22634174	0.0561962	SOX2.p2	AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1	AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1
hg18_v1_chr7_+_6596183_6596468	0.0561821	SOX2.p2	BC001076|C7orf26|79034|chromosome 7 open reading frame 26	BC005121|C7orf26|79034|chromosome 7 open reading frame 26	AK056149|C7orf26|79034|chromosome 7 open reading frame 26	NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	CR620057|C7orf26|79034|chromosome 7 open reading frame 26
hg18_v1_chr1_-_184696839_184696861	0.0560871	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr1_-_31154023_31154247	0.0560471	SOX2.p2	AF248634|SDC3|9672|syndecan 3	NM_014654|SDC3|9672|syndecan 3
hg18_v1_chr7_+_127015650_127015827	0.0559419	SOX2.p2	CR592093|ARF5|381|ADP-ribosylation factor 5	CR624513|ARF5|381|ADP-ribosylation factor 5	AK307297|ARF5|381|ADP-ribosylation factor 5	CR598890|ARF5|381|ADP-ribosylation factor 5	CR619680|ARF5|381|ADP-ribosylation factor 5	AK308548|ARF5|381|ADP-ribosylation factor 5	BC033104|ARF5|381|ADP-ribosylation factor 5	CR610040|ARF5|381|ADP-ribosylation factor 5	CR619021|ARF5|381|ADP-ribosylation factor 5	CR625498|ARF5|381|ADP-ribosylation factor 5	CR624558|ARF5|381|ADP-ribosylation factor 5	CR618126|ARF5|381|ADP-ribosylation factor 5	M57567|ARF5|381|ADP-ribosylation factor 5	AK297026|ARF5|381|ADP-ribosylation factor 5	AK312107|ARF5|381|ADP-ribosylation factor 5	CR619769|ARF5|381|ADP-ribosylation factor 5	BC003043|ARF5|381|ADP-ribosylation factor 5	NM_001662|ARF5|381|ADP-ribosylation factor 5	AF493884|ARF5|381|ADP-ribosylation factor 5	BT007087|ARF5|381|ADP-ribosylation factor 5	CR614865|ARF5|381|ADP-ribosylation factor 5
hg18_v1_chr11_+_65164963_65164995	0.0557427	SOX2.p2	
hg18_v1_chr3_-_115825742_115825742	0.0557001	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr17_-_44026042_44026157	0.05556	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg18_v1_chr3_-_123584747_123584787	0.0554479	SOX2.p2	BC109378|CCDC58|131076|coiled-coil domain containing 58	BC054051|CCDC58|131076|coiled-coil domain containing 58	BC062725|CCDC58|131076|coiled-coil domain containing 58	NM_001017928|CCDC58|131076|coiled-coil domain containing 58
hg18_v1_chrX_-_13745134_13745152	0.0554338	SOX2.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg18_v1_chr6_+_33045070_33045089	0.0553704	SOX2.p2	
hg18_v1_chr22_-_35428848_35428848	0.0553185	SOX2.p2	NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2
hg18_v1_chr1_+_213245507_213245507	0.0553062	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr20_+_60311469_60311473	0.0552899	SOX2.p2	CR616656|ADRM1|11047|adhesion regulating molecule 1	CR604310|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr5_-_78318112_78318112	0.0552871	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg18_v1_chr3_-_171013145_171013413	0.0552571	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34	CR606238|LRRC34|151827|leucine rich repeat containing 34
hg18_v1_chr2_+_28892366_28892384	0.0552104	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg18_v1_chr17_-_39796649_39796847	0.0551816	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg18_v1_chr2_+_173129119_173129124	0.0550971	SOX2.p2	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg18_v1_chr4_+_175441619_175441757	0.0550534	SOX2.p2	NM_001145314|KIAA1712|80817|KIAA1712	BC038667|KIAA1712|80817|KIAA1712	AB051499|KIAA1712|80817|KIAA1712	AK094961|KIAA1712|80817|KIAA1712	AK292484|KIAA1712|80817|KIAA1712
hg18_v1_chr7_-_148212312_148212316	0.055051	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr10_+_91164418_91164519	0.0550335	SOX2.p2	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	CR624828|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg18_v1_chr3_-_113842553_113842594	0.0550032	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr11_+_69165065_69165118	0.0549899	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg18_v1_chr6_+_148705646_148705720	0.0549734	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr19_+_60803412_60803563	0.0549427	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg18_v1_chr7_+_91408086_91408348	0.0549158	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg18_v1_chr3_+_180763380_180763427	0.0548506	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	CR602120|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	CR597700|ACTL6A|86|actin-like 6A	CR613774|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg18_v1_chr6_+_29382381_29382445	0.0548204	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr21_-_32026276_32026338	0.0547931	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr2_-_74455161_74455369	0.0547414	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chr17_+_2187545_2187759	0.0546716	SOX2.p2	NM_014853|SGSM2|9905|small G protein signaling modulator 2	AB007857|SGSM2|9905|small G protein signaling modulator 2	NM_001098509|SGSM2|9905|small G protein signaling modulator 2	BC039204|SGSM2|9905|small G protein signaling modulator 2	AK294955|SGSM2|9905|small G protein signaling modulator 2	AB275762|SGSM2|9905|small G protein signaling modulator 2	AB449878|SGSM2|9905|small G protein signaling modulator 2	AK304263|SGSM2|9905|small G protein signaling modulator 2
hg18_v1_chr15_+_40353657_40353969	0.0546084	SOX2.p2	NM_198141|GANC|2595|glucosidase, alpha; neutral C	AK301467|GANC|2595|glucosidase, alpha; neutral C	AK074037|GANC|2595|glucosidase, alpha; neutral C	BC059406|GANC|2595|glucosidase, alpha; neutral C	BC093833|GANC|2595|glucosidase, alpha; neutral C	BC112051|GANC|2595|glucosidase, alpha; neutral C	AF545045|GANC|2595|glucosidase, alpha; neutral C	AF545046|GANC|2595|glucosidase, alpha; neutral C	AM392591|GANC|2595|glucosidase, alpha; neutral C	AM393467|GANC|2595|glucosidase, alpha; neutral C	BC151223|GANC|2595|glucosidase, alpha; neutral C
hg18_v1_chr4_-_88531353_88531478	0.0545962	SOX2.p2	AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg18_v1_chr7_-_105304159_105304283	0.0544203	SOX2.p2	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr6_-_79844618_79844656	0.0542395	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr2_-_202215593_202215684	0.054171	SOX2.p2	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr1_+_84636802_84636811	0.054152	SOX2.p2	AF274571|DNASE2B|58511|deoxyribonuclease II beta	NM_021233|DNASE2B|58511|deoxyribonuclease II beta	BC126136|DNASE2B|58511|deoxyribonuclease II beta	BC126138|DNASE2B|58511|deoxyribonuclease II beta
hg18_v1_chr2_+_178767317_178767623	0.0541474	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr6_+_153060722_153060874	0.0539825	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr7_+_2638108_2638150	0.0539825	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr10_-_98021144_98021322	0.0539383	SOX2.p2	AM180327|BLNK|29760|B-cell linker	AM180328|BLNK|29760|B-cell linker	AM180329|BLNK|29760|B-cell linker	AM180330|BLNK|29760|B-cell linker	AM180331|BLNK|29760|B-cell linker	AM180332|BLNK|29760|B-cell linker	AM180333|BLNK|29760|B-cell linker	AM180334|BLNK|29760|B-cell linker	AM180335|BLNK|29760|B-cell linker	AM180336|BLNK|29760|B-cell linker	AM180337|BLNK|29760|B-cell linker	AM180338|BLNK|29760|B-cell linker	AM180339|BLNK|29760|B-cell linker	AM180340|BLNK|29760|B-cell linker	AM180341|BLNK|29760|B-cell linker	AM180342|BLNK|29760|B-cell linker	AM180343|BLNK|29760|B-cell linker	AM180344|BLNK|29760|B-cell linker	AM180345|BLNK|29760|B-cell linker	AM180346|BLNK|29760|B-cell linker	BC018906|BLNK|29760|B-cell linker	CR598772|BLNK|29760|B-cell linker	BC110298|BLNK|29760|B-cell linker	AK027779|BLNK|29760|B-cell linker	AF068180|BLNK|29760|B-cell linker	AF068181|BLNK|29760|B-cell linker	AK225546|BLNK|29760|B-cell linker	NM_001114094|BLNK|29760|B-cell linker	NM_013314|BLNK|29760|B-cell linker
hg18_v1_chr19_+_43089720_43089785	0.0539217	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg18_v1_chr5_+_137231458_137231472	0.0538976	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg18_v1_chr2_+_24660849_24660913	0.0538863	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr19_-_50688310_50688357	0.0538631	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg18_v1_chr5_+_176492662_176492685	0.0538587	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr15_-_88143721_88143789	0.0536845	SOX2.p2	CR595462|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr11_+_72696963_72697141	0.0536624	SOX2.p2	AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr16_-_67723993_67723993	0.0536234	SOX2.p2	NM_001039690|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr5_-_1397941_1398104	0.0536229	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg18_v1_chr6_+_26071255_26071398	0.0534715	SOX2.p2	CR607808|TRIM38|10475|tripartite motif containing 38	CR936707|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr9_+_128716867_128716983	0.0533556	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg18_v1_chr6_+_43846735_43846961	0.0533448	SOX2.p2	M27281|VEGFA|7422|vascular endothelial growth factor A	M32977|VEGFA|7422|vascular endothelial growth factor A	AY047581|VEGFA|7422|vascular endothelial growth factor A	X62568|VEGFA|7422|vascular endothelial growth factor A	EU832814|VEGFA|7422|vascular endothelial growth factor A	GQ129408|VEGFA|7422|vascular endothelial growth factor A	AB021221|VEGFA|7422|vascular endothelial growth factor A	AB451322|VEGFA|7422|vascular endothelial growth factor A	AB451451|VEGFA|7422|vascular endothelial growth factor A	AF091352|VEGFA|7422|vascular endothelial growth factor A	AF214570|VEGFA|7422|vascular endothelial growth factor A	AF430806|VEGFA|7422|vascular endothelial growth factor A	AF486837|VEGFA|7422|vascular endothelial growth factor A	AJ010438|VEGFA|7422|vascular endothelial growth factor A	AY263145|VEGFA|7422|vascular endothelial growth factor A	AY500353|VEGFA|7422|vascular endothelial growth factor A	AY766116|VEGFA|7422|vascular endothelial growth factor A	DQ229900|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr12_-_11041740_11041740	0.0531388	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr2_+_148319033_148319191	0.0531215	SOX2.p2	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr6_+_42639929_42640035	0.0531153	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr4_-_83702123_83702154	0.0530686	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg18_v1_chr17_+_27838665_27838756	0.052926	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg18_v1_chr1_+_87566738_87566752	0.0529175	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr2_-_26395420_26395473	0.0529077	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg18_v1_chr12_+_30971104_30971158	0.0528852	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg18_v1_chr9_+_39345665_39345706	0.0528802	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr5_-_114659863_114659885	0.0527051	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg18_v1_chr2_-_38379031_38379115	0.0526915	SOX2.p2	AK316179|ATL2|64225|atlastin GTPase 2
hg18_v1_chr20_+_6696744_6696744	0.0526736	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg18_v1_chr9_-_96442377_96442390	0.052642	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr5_-_22889192_22889215	0.0525714	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr11_-_118167036_118167057	0.0523879	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr15_+_80434362_80434411	0.0523745	SOX2.p2	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2
hg18_v1_chr8_+_28407613_28407756	0.0523745	SOX2.p2	AK291480|FZD3|7976|frizzled homolog 3 (Drosophila)	AB039723|FZD3|7976|frizzled homolog 3 (Drosophila)	NM_017412|FZD3|7976|frizzled homolog 3 (Drosophila)
hg18_v1_chr5_+_161208119_161208146	0.0523509	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr12_+_52132176_52132244	0.0523308	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr17_+_35728039_35728062	0.0523025	SOX2.p2	AK292205|RARA|5914|retinoic acid receptor, alpha	FJ487576|RARA|5914|retinoic acid receptor, alpha
hg18_v1_chr4_-_83570318_83570437	0.0522898	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr18_-_51406841_51406859	0.0522418	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr14_-_105279582_105279607	0.0521857	SOX2.p2	
hg18_v1_chr22_-_37043163_37043312	0.0521582	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	CR591261|CSNK1E|1454|casein kinase 1, epsilon	CR596620|CSNK1E|1454|casein kinase 1, epsilon	CR601194|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon	CR618321|CSNK1E|1454|casein kinase 1, epsilon	CR601968|CSNK1E|1454|casein kinase 1, epsilon	CR614988|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr6_-_18263262_18263352	0.0521339	SOX2.p2	S62904|TPMT|7172|thiopurine S-methyltransferase	AK310420|TPMT|7172|thiopurine S-methyltransferase	U12387|TPMT|7172|thiopurine S-methyltransferase	BC005339|TPMT|7172|thiopurine S-methyltransferase	BC009596|TPMT|7172|thiopurine S-methyltransferase	NM_000367|TPMT|7172|thiopurine S-methyltransferase
hg18_v1_chr7_+_143683365_143683507	0.0520829	SOX2.p2	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg18_v1_chr8_+_70567634_70567652	0.052081	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg18_v1_chr8_+_62363078_62363131	0.0520458	SOX2.p2	NM_173519|CLVS1|157807|clavesin 1	AF445194|CLVS1|157807|clavesin 1	BC048992|CLVS1|157807|clavesin 1	AK091641|CLVS1|157807|clavesin 1	BC042617|CLVS1|157807|clavesin 1	CR591744|CLVS1|157807|clavesin 1	CR599613|CLVS1|157807|clavesin 1	AY094971|CLVS1|157807|clavesin 1	AK313040|CLVS1|157807|clavesin 1
hg18_v1_chr6_-_53517466_53517487	0.0520214	SOX2.p2	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit
hg18_v1_chr17_+_62804036_62804065	0.0519281	SOX2.p2	AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg18_v1_chr2_-_61566477_61566607	0.0518549	SOX2.p2	CR609163|XPO1|7514|exportin 1 (CRM1 homolog, yeast)
hg18_v1_chr17_-_38978772_38978830	0.0518501	SOX2.p2	BC016623|ETV4|2118|ets variant 4	AK290429|ETV4|2118|ets variant 4	AK299019|ETV4|2118|ets variant 4	AK312934|ETV4|2118|ets variant 4	NM_001986|ETV4|2118|ets variant 4
hg18_v1_chr6_-_31617704_31617746	0.0517056	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR600093|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR612427|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR623314|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR601722|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR625065|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR620111|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR590279|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chrX_-_2892288_2892493	0.0516697	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg18_v1_chr3_+_179736917_179736917	0.0515995	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr5_+_145297490_145297632	0.0515559	SOX2.p2	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2
hg18_v1_chr1_+_144149794_144150272	0.0515356	SOX2.p2	NM_006472|TXNIP|10628|thioredoxin interacting protein	AK301203|TXNIP|10628|thioredoxin interacting protein	BX537824|TXNIP|10628|thioredoxin interacting protein	AK226090|TXNIP|10628|thioredoxin interacting protein	S73591|TXNIP|10628|thioredoxin interacting protein	BC093702|TXNIP|10628|thioredoxin interacting protein	BC093704|TXNIP|10628|thioredoxin interacting protein	AY594328|TXNIP|10628|thioredoxin interacting protein	BC024305|TXNIP|10628|thioredoxin interacting protein	AK301148|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr6_-_33364727_33364775	0.0514133	SOX2.p2	CR597118|WDR46|9277|WD repeat domain 46
hg18_v1_chr16_-_19440786_19440969	0.0513755	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR624901|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR590251|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605351|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR607083|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605785|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR612471|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR591783|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR620034|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg18_v1_chr19_-_56222593_56222696	0.0512843	SOX2.p2	AY359014|KLK11|11012|kallikrein-related peptidase 11	AB012917|KLK11|11012|kallikrein-related peptidase 11	BC015551|KLK11|11012|kallikrein-related peptidase 11	AB041036|KLK11|11012|kallikrein-related peptidase 11	NM_144947|KLK11|11012|kallikrein-related peptidase 11
hg18_v1_chr1_+_1104939_1104972	0.0512284	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr5_-_118352122_118352152	0.0511716	SOX2.p2	BC114508|DTWD2|285605|DTW domain containing 2	BC114955|DTWD2|285605|DTW domain containing 2	AK091296|DTWD2|285605|DTW domain containing 2	NM_173666|DTWD2|285605|DTW domain containing 2
hg18_v1_chr2_+_11213020_11213044	0.0511527	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr14_-_37134050_37134085	0.0510905	SOX2.p2	AK313785|FOXA1|3169|forkhead box A1
hg18_v1_chr1_-_203985701_203985724	0.0510662	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr2_+_66516196_66516492	0.0510513	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg18_v1_chr5_+_156752739_156752794	0.0509125	SOX2.p2	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr19_+_10515591_10515765	0.0508962	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr2_-_55131157_55131175	0.050792	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr1_+_116727514_116727514	0.0506844	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr8_-_7320013_7320013	0.0506775	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr14_-_23107106_23107118	0.0506731	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chr12_+_30970882_30970973	0.0506232	SOX2.p2	AK293947|TSPAN11|441631|tetraspanin 11
hg18_v1_chr11_-_125730655_125730691	0.0504408	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr5_+_38439399_38439406	0.0502608	SOX2.p2	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182799|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg18_v1_chr1_+_68070573_68070579	0.0501985	SOX2.p2	
hg18_v1_chr11_+_117680504_117680877	0.050189	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr1_-_154484341_154484490	0.0501245	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	CR621140|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	CR618069|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	CR590814|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI	CR619912|PAQR6|79957|progestin and adipoQ receptor family member VI
hg18_v1_chr19_-_12695628_12695841	0.0500392	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg18_v1_chr14_+_64040979_64041044	0.0498774	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr12_-_113330574_113330629	0.0497717	SOX2.p2	AB051068|TBX5|6910|T-box 5	AF221714|TBX5|6910|T-box 5	NM_000192|TBX5|6910|T-box 5	NM_080717|TBX5|6910|T-box 5	Y09445|TBX5|6910|T-box 5
hg18_v1_chr15_+_80741876_80742015	0.0497633	SOX2.p2	BC007811|LOC80154|80154|hypothetical LOC80154	BC065260|LOC80154|80154|hypothetical LOC80154	AK026448|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr21_-_35153664_35153748	0.0497319	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr1_-_43410556_43410827	0.0497161	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg18_v1_chr1_+_198449278_198449278	0.0496749	SOX2.p2	NM_001105517|FAM58B|339521|family with sequence similarity 58, member B
hg18_v1_chrX_+_49213543_49213553	0.0494619	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr6_-_79844606_79844609	0.0494085	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr3_+_133801670_133801670	0.0493519	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg18_v1_chr1_+_209586328_209586328	0.0493319	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr21_+_29322100_29322128	0.0492871	SOX2.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg18_v1_chr5_+_6767717_6767784	0.0492736	SOX2.p2	NM_001171805|PAPD7|11044|PAP associated domain containing 7	NM_006999|PAPD7|11044|PAP associated domain containing 7	AF089896|PAPD7|11044|PAP associated domain containing 7	BC084567|PAPD7|11044|PAP associated domain containing 7
hg18_v1_chr1_-_148508030_148508155	0.0492717	SOX2.p2	CR591178|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr2_+_99320181_99320449	0.0491368	SOX2.p2	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr17_+_52689372_52689372	0.0491254	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr3_-_113842255_113842279	0.0490908	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr17_+_35728070_35728077	0.048992	SOX2.p2	AK130192|RARA|5914|retinoic acid receptor, alpha
hg18_v1_chr5_+_53849251_53849353	0.048992	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg18_v1_chr17_-_36570508_36570511	0.0489169	SOX2.p2	AJ406936|KRTAP4-4|84616|keratin associated protein 4-4	NM_032524|KRTAP4-4|84616|keratin associated protein 4-4	AJ296168|KRTAP4-4|84616|keratin associated protein 4-4
hg18_v1_chr2_-_138762909_138762922	0.0488703	SOX2.p2	
hg18_v1_chr6_-_108385905_108385995	0.0488588	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr3_+_186786655_186786900	0.0488145	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg18_v1_chr2_-_160764819_160764847	0.0487354	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg18_v1_chr2_-_133145539_133145621	0.048701	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr2_-_172458970_172459089	0.048629	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg18_v1_chr3_-_150569574_150569644	0.0485773	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr17_-_74361620_74361680	0.0485622	SOX2.p2	CR621263|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr20_+_254205_254268	0.0485508	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg18_v1_chr11_-_780065_780091	0.0484856	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr15_-_32446537_32447207	0.0483804	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	CR617279|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg18_v1_chr1_-_246525502_246525502	0.0483588	SOX2.p2	NM_001004692|OR2T12|127064|olfactory receptor, family 2, subfamily T, member 12
hg18_v1_chr2_-_190336168_190336197	0.0483204	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg18_v1_chr1_-_156816312_156816312	0.048307	SOX2.p2	NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1
hg18_v1_chr17_+_53515725_53515844	0.0482758	SOX2.p2	AK312125|DYNLL2|140735|dynein, light chain, LC8-type 2	NM_080677|DYNLL2|140735|dynein, light chain, LC8-type 2	BC010744|DYNLL2|140735|dynein, light chain, LC8-type 2
hg18_v1_chr4_+_41678469_41678596	0.048209	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg18_v1_chr4_-_145281237_145281353	0.0481933	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	CR619929|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg18_v1_chr13_-_35842289_35842316	0.048156	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr8_-_74822206_74822294	0.0480234	SOX2.p2	AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr22_-_43040063_43040063	0.0479909	SOX2.p2	NM_001099294|KIAA1644|85352|KIAA1644
hg18_v1_chr6_-_32742265_32742571	0.0478986	SOX2.p2	L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1
hg18_v1_chr16_-_54547443_54547443	0.0478495	SOX2.p2	AK294334|CES5A|221223|carboxylesterase 5A	NM_001190158|CES5A|221223|carboxylesterase 5A
hg18_v1_chr14_-_103098326_103098411	0.0477309	SOX2.p2	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chr21_+_37496616_37496639	0.0477247	SOX2.p2	CR593065|TTC3|7267|tetratricopeptide repeat domain 3
hg18_v1_chr14_+_23590939_23591093	0.0477063	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg18_v1_chr3_-_46879883_46879976	0.0476948	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg18_v1_chr11_+_93501811_93502126	0.0476403	SOX2.p2	AY359023|PANX1|24145|pannexin 1	FM201789|PANX1|24145|pannexin 1
hg18_v1_chr20_+_60311443_60311468	0.0476389	SOX2.p2	BC017245|ADRM1|11047|adhesion regulating molecule 1	BC093021|ADRM1|11047|adhesion regulating molecule 1	BC003059|ADRM1|11047|adhesion regulating molecule 1	AK297567|ADRM1|11047|adhesion regulating molecule 1	CR620862|ADRM1|11047|adhesion regulating molecule 1	D64154|ADRM1|11047|adhesion regulating molecule 1	CR600340|ADRM1|11047|adhesion regulating molecule 1	CR593414|ADRM1|11047|adhesion regulating molecule 1	CR619277|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr12_+_100512877_100512977	0.0476279	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg18_v1_chr7_-_44854222_44854281	0.0476017	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg18_v1_chr16_+_67724023_67724034	0.0475331	SOX2.p2	BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr6_-_79844658_79844894	0.0475107	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr20_-_44151952_44151969	0.0474418	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr17_-_7086466_7086508	0.0474131	SOX2.p2	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg18_v1_chr17_+_62261696_62261699	0.0473572	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg18_v1_chr19_-_57100052_57100116	0.0473487	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	CR590368|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg18_v1_chr17_+_60563963_60564120	0.0473082	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	CR613211|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg18_v1_chr18_-_49944986_49944994	0.0472776	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr15_-_53349775_53349876	0.0472658	SOX2.p2	AF125393|RAB27A|5873|RAB27A, member RAS oncogene family	NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family	U57094|RAB27A|5873|RAB27A, member RAS oncogene family	NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	U38654|RAB27A|5873|RAB27A, member RAS oncogene family
hg18_v1_chr11_+_93501791_93501807	0.0472153	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg18_v1_chr5_-_111121691_111121813	0.0471554	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr8_+_32698892_32698977	0.0470566	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg18_v1_chr1_-_17638797_17638825	0.0470408	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr12_-_11066436_11066485	0.0469979	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg18_v1_chr4_+_189153918_189153937	0.0469841	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)	CR624529|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg18_v1_chr2_-_56003859_56003859	0.0469642	SOX2.p2	NM_004105|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg18_v1_chr12_-_111114908_111114914	0.0469379	SOX2.p2	AF174498|C12orf51|283450|chromosome 12 open reading frame 51
hg18_v1_chr15_+_38673509_38673525	0.0468466	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr6_+_142510108_142510123	0.0467782	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr19_+_60858230_60858282	0.0467178	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg18_v1_chr3_-_189354510_189354619	0.0466782	SOX2.p2	BC042414|LOC339929|339929|hypothetical LOC339929
hg18_v1_chr20_-_30259007_30259266	0.0466593	SOX2.p2	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg18_v1_chr9_-_124280025_124280055	0.0466382	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr12_+_51730101_51730233	0.0465389	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr19_+_2115119_2115157	0.0465338	SOX2.p2	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg18_v1_chr17_-_74433048_74433096	0.0464974	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr8_+_64243741_64243767	0.0464957	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr1_-_172228673_172228832	0.0464904	SOX2.p2	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr10_-_91001566_91001639	0.0464786	SOX2.p2	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg18_v1_chrX_+_41191630_41191656	0.0463142	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg18_v1_chr9_+_111442888_111442892	0.0461916	SOX2.p2	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg18_v1_chr22_+_44828338_44828438	0.046124	SOX2.p2	
hg18_v1_chr2_-_200033445_200033528	0.0461182	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg18_v1_chr7_-_136678815_136678871	0.0460686	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg18_v1_chr21_+_40161216_40161278	0.04604	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg18_v1_chr4_+_100714995_100715066	0.0460115	SOX2.p2	AK225328|MTTP|4547|microsomal triglyceride transfer protein	BC062696|MTTP|4547|microsomal triglyceride transfer protein	X59657|MTTP|4547|microsomal triglyceride transfer protein	AK290793|MTTP|4547|microsomal triglyceride transfer protein	CR596497|MTTP|4547|microsomal triglyceride transfer protein	BC125110|MTTP|4547|microsomal triglyceride transfer protein	BC125111|MTTP|4547|microsomal triglyceride transfer protein	X75500|MTTP|4547|microsomal triglyceride transfer protein	X91148|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr5_+_61637993_61638061	0.0459995	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr2_-_121875610_121875641	0.0459605	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg18_v1_chr19_-_3930828_3931135	0.0459458	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg18_v1_chr6_-_80001043_80001111	0.0459237	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR599808|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr3_+_39346200_39346298	0.0458128	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr20_+_19903778_19903991	0.0457428	SOX2.p2	M37190|RIN2|54453|Ras and Rab interactor 2	CR617469|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr8_+_26491838_26491851	0.0456887	SOX2.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr11_+_63510876_63510903	0.0456833	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr11_+_69165018_69165056	0.0455601	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg18_v1_chr6_+_27215039_27215066	0.0455331	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	CR599017|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg18_v1_chr4_+_106849354_106849490	0.0454999	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg18_v1_chr6_+_87921980_87922037	0.0454735	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg18_v1_chr2_+_208284610_208284670	0.0454061	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr9_+_71009746_71009897	0.045313	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr1_-_31251315_31251371	0.0452834	SOX2.p2	CR592163|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr1_+_179269689_179269760	0.0452115	SOX2.p2	AK304645|MR1|3140|major histocompatibility complex, class I-related	AK290374|MR1|3140|major histocompatibility complex, class I-related	AK222910|MR1|3140|major histocompatibility complex, class I-related	CR602405|MR1|3140|major histocompatibility complex, class I-related
hg18_v1_chr16_+_64958025_64958043	0.0451823	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr6_-_111243309_111243529	0.04513	SOX2.p2	BC024247|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr11_+_72697310_72697316	0.0451037	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr1_-_219977424_219977424	0.0450818	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg18_v1_chr16_+_66433722_66433801	0.0450518	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg18_v1_chr10_+_59764718_59764967	0.0450365	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr7_+_94135384_94135392	0.0449959	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg18_v1_chr19_-_16103996_16104128	0.0449832	SOX2.p2	
hg18_v1_chr2_-_74460933_74460989	0.0449032	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg18_v1_chr17_-_36981830_36981835	0.0448929	SOX2.p2	BC121170|KRT9|3857|keratin 9	NM_000226|KRT9|3857|keratin 9	S69510|KRT9|3857|keratin 9	Z29074|KRT9|3857|keratin 9
hg18_v1_chr10_+_73393998_73394128	0.0448492	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg18_v1_chr12_+_119418299_119418347	0.0448434	SOX2.p2	CR590506|DYNLL1|8655|dynein, light chain, LC8-type 1	CR619359|DYNLL1|8655|dynein, light chain, LC8-type 1	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	CR607733|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1	CR609172|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr12_+_74014685_74014774	0.0448392	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chrX_+_48127911_48127911	0.0448285	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg18_v1_chr6_-_26307418_26307499	0.0447279	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr3_-_180452096_180452111	0.0446589	SOX2.p2	AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg18_v1_chr12_+_4700012_4700046	0.0446513	SOX2.p2	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg18_v1_chr13_+_21143083_21143214	0.0445729	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr3_-_25658829_25658855	0.0444818	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr6_+_160103500_160103534	0.0444113	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg18_v1_chr4_+_81337663_81337694	0.0444008	SOX2.p2	NM_001099403|PRDM8|56978|PR domain containing 8	BC071584|PRDM8|56978|PR domain containing 8	AK292137|PRDM8|56978|PR domain containing 8	BC027929|PRDM8|56978|PR domain containing 8
hg18_v1_chr1_+_234372454_234372545	0.0442748	SOX2.p2	BC012100|GPR137B|7107|G protein-coupled receptor 137B	NM_003272|GPR137B|7107|G protein-coupled receptor 137B	AK295408|GPR137B|7107|G protein-coupled receptor 137B	AK312908|GPR137B|7107|G protein-coupled receptor 137B	AK223632|GPR137B|7107|G protein-coupled receptor 137B	AK301552|GPR137B|7107|G protein-coupled receptor 137B	CR608564|GPR137B|7107|G protein-coupled receptor 137B	AF027826|GPR137B|7107|G protein-coupled receptor 137B	AY242135|GPR137B|7107|G protein-coupled receptor 137B	CR541770|GPR137B|7107|G protein-coupled receptor 137B
hg18_v1_chr22_+_42900168_42900211	0.0442706	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg18_v1_chr10_-_116434364_116434403	0.0442693	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg18_v1_chr12_+_16391795_16391978	0.0442558	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	CR618561|MGST1|4257|microsomal glutathione S-transferase 1	CR609242|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg18_v1_chr4_-_54152385_54152416	0.0442297	SOX2.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr3_+_19963534_19963853	0.0441702	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr6_+_73133152_73133205	0.0440994	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr10_+_102096761_102096902	0.044027	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg18_v1_chr3_-_10124763_10124914	0.0439901	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg18_v1_chr2_-_215953818_215953973	0.0439841	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg18_v1_chr3_-_113842237_113842248	0.0439731	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chrX_+_108666891_108667130	0.0439266	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr1_-_23567084_23567487	0.0439214	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg18_v1_chr6_+_26070957_26071068	0.0438807	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr17_-_35337288_35337428	0.0437818	SOX2.p2	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	CR620858|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)
hg18_v1_chr6_+_42639745_42639765	0.0437591	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr1_+_153213740_153213766	0.0437149	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg18_v1_chr3_-_161766005_161766023	0.0436919	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr6_-_83960351_83960412	0.0436355	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr2_-_77602843_77603009	0.043592	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg18_v1_chr21_-_30908093_30908119	0.0435872	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr17_+_7900926_7900928	0.0435491	SOX2.p2	
hg18_v1_chr11_-_2970098_2970105	0.0435059	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr14_+_20222575_20222657	0.0434764	SOX2.p2	CR623403|RNASE4|6038|ribonuclease, RNase A family, 4	CR622207|RNASE4|6038|ribonuclease, RNase A family, 4	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr7_-_148212336_148212382	0.0433294	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr3_+_42176662_42176857	0.0432893	SOX2.p2	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1	NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1	BC015922|TRAK1|22906|trafficking protein, kinesin binding 1	AK000754|TRAK1|22906|trafficking protein, kinesin binding 1	AM392573|TRAK1|22906|trafficking protein, kinesin binding 1	AM393596|TRAK1|22906|trafficking protein, kinesin binding 1	EU446989|TRAK1|22906|trafficking protein, kinesin binding 1
hg18_v1_chr2_-_161058120_161058290	0.0432733	SOX2.p2	D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr2_+_208284484_208284609	0.0432701	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr11_+_128069203_128069327	0.0432334	SOX2.p2	CR600005|FLI1|2313|Friend leukemia virus integration 1	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr2_+_11213053_11213175	0.0431856	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3	CR602070|PQLC3|130814|PQ loop repeat containing 3	CR624863|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr17_+_63252087_63252242	0.0431817	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr22_-_37043330_37043390	0.0431733	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon	CR617099|CSNK1E|1454|casein kinase 1, epsilon	CR622296|CSNK1E|1454|casein kinase 1, epsilon	CR592492|CSNK1E|1454|casein kinase 1, epsilon	CR599035|CSNK1E|1454|casein kinase 1, epsilon	CR618521|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr1_-_241485105_241485285	0.0429402	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr11_-_77026406_77026519	0.0429304	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR604322|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR605039|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR617856|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg18_v1_chr4_+_189297591_189297638	0.0428674	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr6_-_130578110_130578186	0.0428328	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr10_-_21854616_21854616	0.0428248	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg18_v1_chr17_-_60439764_60439772	0.0427938	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr6_-_47362102_47362179	0.0427604	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr3_+_188131209_188131334	0.042737	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr7_-_137182125_137182148	0.0426078	SOX2.p2	NM_004717|DGKI|9162|diacylglycerol kinase, iota
hg18_v1_chr8_+_104452961_104453097	0.042577	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr11_+_111551417_111551688	0.0425471	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr1_-_151873191_151873191	0.0424484	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg18_v1_chr1_-_33587998_33588083	0.042429	SOX2.p2	AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)
hg18_v1_chr7_+_149200937_149201013	0.0424252	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg18_v1_chr11_-_56267862_56267862	0.0423802	SOX2.p2	NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4
hg18_v1_chr10_+_105716925_105716984	0.0423713	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg18_v1_chr15_+_20444155_20444160	0.0423403	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr12_-_107551744_107551780	0.0423152	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr5_+_110455961_110456028	0.0422396	SOX2.p2	CR600030|WDR36|134430|WD repeat domain 36
hg18_v1_chr14_-_20921925_20922000	0.0422351	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr15_-_80125403_80125440	0.0421787	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr4_+_15292363_15292486	0.0421502	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr15_+_20444140_20444149	0.0421141	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr1_-_167603623_167603809	0.0419665	SOX2.p2	CR605539|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	CR599535|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr12_-_368517_368686	0.041959	SOX2.p2	AK225060|KDM5A|5927|lysine (K)-specific demethylase 5A	BC110916|KDM5A|5927|lysine (K)-specific demethylase 5A	S66431|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307580|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307689|KDM5A|5927|lysine (K)-specific demethylase 5A
hg18_v1_chr11_-_6661093_6661207	0.0419337	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr14_-_80757018_80757048	0.0418042	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg18_v1_chr20_+_60558369_60558429	0.0417624	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr11_-_2970126_2970136	0.0417576	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr1_+_84540921_84540921	0.0417426	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr2_+_157822355_157822723	0.0416302	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg18_v1_chr2_-_10870306_10870437	0.0415333	SOX2.p2	CR606263|PDIA6|10130|protein disulfide isomerase family A, member 6	CR614510|PDIA6|10130|protein disulfide isomerase family A, member 6	CR624923|PDIA6|10130|protein disulfide isomerase family A, member 6	CR617062|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595714|PDIA6|10130|protein disulfide isomerase family A, member 6	CR606166|PDIA6|10130|protein disulfide isomerase family A, member 6	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602648|PDIA6|10130|protein disulfide isomerase family A, member 6	CR607388|PDIA6|10130|protein disulfide isomerase family A, member 6	CR594255|PDIA6|10130|protein disulfide isomerase family A, member 6	CR622384|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595577|PDIA6|10130|protein disulfide isomerase family A, member 6	CR593821|PDIA6|10130|protein disulfide isomerase family A, member 6	CR599723|PDIA6|10130|protein disulfide isomerase family A, member 6	CR590867|PDIA6|10130|protein disulfide isomerase family A, member 6	CR601561|PDIA6|10130|protein disulfide isomerase family A, member 6	CR620116|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602748|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595109|PDIA6|10130|protein disulfide isomerase family A, member 6	CR608933|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chr1_-_203985932_203985939	0.0415314	SOX2.p2	
hg18_v1_chr10_-_13430024_13430067	0.0415245	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr6_+_37511383_37511447	0.0414665	SOX2.p2	
hg18_v1_chr2_-_206659140_206659172	0.041463	SOX2.p2	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chrX_-_110541029_110541029	0.0414591	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr16_+_49333513_49333605	0.0413892	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr16_+_68284252_68284329	0.0412939	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr16_+_56230707_56230930	0.0412861	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr15_-_88148177_88148182	0.0412263	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr14_-_49652944_49653097	0.0412075	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	CR597030|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg18_v1_chr21_+_44002290_44002434	0.0411186	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg18_v1_chr8_-_81949570_81949570	0.0411046	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr7_+_56086960_56087060	0.0410773	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr5_-_134762814_134762826	0.0410763	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	CR607903|H2AFY|9555|H2A histone family, member Y	CR622086|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr10_-_95452301_95452350	0.0410584	SOX2.p2	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR621041|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR625507|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg18_v1_chr10_+_80942362_80942362	0.0410544	SOX2.p2	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1	NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1
hg18_v1_chr6_+_151228577_151228651	0.0410092	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr9_+_139202874_139203020	0.0409704	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR620508|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR611889|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg18_v1_chr14_+_22633728_22633819	0.0408958	SOX2.p2	AK024794|C14orf119|55017|chromosome 14 open reading frame 119	CR622831|C14orf119|55017|chromosome 14 open reading frame 119
hg18_v1_chr14_-_20340830_20340875	0.040871	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr22_-_37043396_37043443	0.0408102	SOX2.p2	CR619665|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr20_+_60130963_60131116	0.0407007	SOX2.p2	CR622108|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)
hg18_v1_chr9_-_8723893_8723945	0.0406939	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr4_-_88531245_88531346	0.0406891	SOX2.p2	CR590939|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR603100|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR607201|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg18_v1_chr4_+_47403107_47403116	0.0406776	SOX2.p2	
hg18_v1_chr9_-_115101140_115101140	0.0405536	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr5_+_76418214_76418347	0.0405531	SOX2.p2	AK311179|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr11_-_55492514_55492565	0.0405011	SOX2.p2	NM_001005491|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136890|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136891|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1
hg18_v1_chr2_+_201385019_201385152	0.0404572	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr7_+_142670624_142670710	0.0404419	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	CR614943|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	CR600089|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1	CR615801|GSTK1|373156|glutathione S-transferase kappa 1	AK289570|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr2_-_70167569_70167665	0.0404342	SOX2.p2	BC040598|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr15_+_22832198_22832286	0.0404277	SOX2.p2	AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr12_+_48765209_48765299	0.0403145	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr5_+_133735004_133735187	0.0403005	SOX2.p2	CR604876|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR616089|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR625304|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)
hg18_v1_chr2_+_79200995_79201094	0.0402828	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr7_+_123083096_123083251	0.040277	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chr18_-_72336133_72336154	0.0401793	SOX2.p2	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr15_-_41000100_41000345	0.0401331	SOX2.p2	CR615164|TTBK2|146057|tau tubulin kinase 2	AF525400|TTBK2|146057|tau tubulin kinase 2	CR611465|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg18_v1_chr1_-_203985963_203985994	0.040043	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr16_-_3870714_3870722	0.04004	SOX2.p2	U85962|CREBBP|1387|CREB binding protein
hg18_v1_chr3_-_11598829_11598837	0.0400125	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr2_-_75791501_75791618	0.039986	SOX2.p2	BC064559|C2orf3|6936|chromosome 2 open reading frame 3	BC000853|C2orf3|6936|chromosome 2 open reading frame 3	EF158467|C2orf3|6936|chromosome 2 open reading frame 3	EF158468|C2orf3|6936|chromosome 2 open reading frame 3	AB026911|C2orf3|6936|chromosome 2 open reading frame 3	NM_003203|C2orf3|6936|chromosome 2 open reading frame 3
hg18_v1_chrX_-_15198509_15198509	0.039963	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg18_v1_chr17_-_44847215_44847279	0.039943	SOX2.p2	S85655|PHB|5245|prohibitin	CR599787|PHB|5245|prohibitin	CR618484|PHB|5245|prohibitin	CR617750|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	CR599633|PHB|5245|prohibitin	CR601626|PHB|5245|prohibitin	CR621290|PHB|5245|prohibitin	CR591049|PHB|5245|prohibitin	CR619581|PHB|5245|prohibitin	CR619685|PHB|5245|prohibitin	CR626185|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg18_v1_chr15_+_21361901_21362021	0.0399173	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr9_-_106730256_106730346	0.039906	SOX2.p2	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr8_-_95343716_95343740	0.0398437	SOX2.p2	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle	BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle	CR603445|GEM|2669|GTP binding protein overexpressed in skeletal muscle
hg18_v1_chrX_+_135406903_135407064	0.0397715	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr12_-_9913724_9913724	0.0397686	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr11_-_51269023_51269023	0.0397403	SOX2.p2	BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5	NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5
hg18_v1_chr12_-_6586736_6586789	0.0396928	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr4_+_53938666_53938766	0.0395062	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr3_+_195336625_195336630	0.0394856	SOX2.p2	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	BC005178|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg18_v1_chr1_-_43692134_43692246	0.039344	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr7_-_44854183_44854186	0.0393126	SOX2.p2	CR602318|H2AFV|94239|H2A histone family, member V
hg18_v1_chr12_-_120218926_120219091	0.0392775	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr3_-_161765765_161765812	0.0392491	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr1_+_53698070_53698167	0.0392167	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr16_+_87164319_87164340	0.0392131	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr7_+_149707338_149707382	0.0391187	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg18_v1_chr15_-_57452357_57452359	0.0390927	SOX2.p2	AK291688|MYO1E|4643|myosin IE
hg18_v1_chr11_-_118167108_118167181	0.0390849	SOX2.p2	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr2_-_210743622_210743708	0.0390652	SOX2.p2	AK124963|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr14_-_105279740_105279770	0.0390361	SOX2.p2	
hg18_v1_chr22_+_21852551_21852690	0.0389536	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg18_v1_chr11_+_113776582_113776642	0.0388291	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	CR592590|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7	CR593114|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr6_-_88468368_88468394	0.0387791	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg18_v1_chr10_+_94584449_94584449	0.0387277	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr19_-_49131250_49131299	0.038722	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg18_v1_chrX_+_122923279_122923358	0.038717	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr2_+_86800898_86800933	0.0386844	SOX2.p2	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr11_+_5667392_5667453	0.0386824	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr1_+_219119623_219119822	0.0386506	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg18_v1_chr9_-_139316523_139316559	0.0385508	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr7_+_44762311_44762373	0.0385127	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr1_+_199259664_199259757	0.0384659	SOX2.p2	
hg18_v1_chr5_+_180258682_180258879	0.0384017	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg18_v1_chr12_-_67643286_67643287	0.0383863	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg18_v1_chr17_-_44847214_44847214	0.0383535	SOX2.p2	BC095460|PHB|5245|prohibitin
hg18_v1_chr22_-_35233032_35233095	0.0383229	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg18_v1_chr6_-_31740645_31741141	0.0383172	SOX2.p2	AJ420471|GPANK1|7918|G patch domain and ankyrin repeats 1	CR602237|GPANK1|7918|G patch domain and ankyrin repeats 1	CR622551|GPANK1|7918|G patch domain and ankyrin repeats 1	CR594031|GPANK1|7918|G patch domain and ankyrin repeats 1	CR596414|GPANK1|7918|G patch domain and ankyrin repeats 1	CR605292|GPANK1|7918|G patch domain and ankyrin repeats 1	CR605834|GPANK1|7918|G patch domain and ankyrin repeats 1	CR626322|GPANK1|7918|G patch domain and ankyrin repeats 1	BC008783|GPANK1|7918|G patch domain and ankyrin repeats 1	BC018875|GPANK1|7918|G patch domain and ankyrin repeats 1	NM_033177|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chr6_+_17390910_17391056	0.0383069	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr1_-_153445592_153445610	0.0382829	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg18_v1_chr5_+_148941228_148941327	0.0382281	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg18_v1_chr6_-_111242883_111242939	0.038228	SOX2.p2	BC047513|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr6_+_149109841_149109963	0.0381666	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg18_v1_chr3_+_108578877_108579124	0.0381592	SOX2.p2	AK058091|CCDC54|84692|coiled-coil domain containing 54	NM_032600|CCDC54|84692|coiled-coil domain containing 54	BC030780|CCDC54|84692|coiled-coil domain containing 54	AF367469|CCDC54|84692|coiled-coil domain containing 54	DQ890829|CCDC54|84692|coiled-coil domain containing 54	DQ890830|CCDC54|84692|coiled-coil domain containing 54	DQ893985|CCDC54|84692|coiled-coil domain containing 54
hg18_v1_chr15_+_20444124_20444136	0.0381528	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr12_-_100979869_100979891	0.0380994	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53	CR609797|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr10_-_61570665_61570779	0.0380868	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr22_-_34566210_34566264	0.0380831	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr15_+_62578671_62578671	0.03804	SOX2.p2	NM_015042|ZNF609|23060|zinc finger protein 609
hg18_v1_chr11_-_118167065_118167065	0.0380301	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr10_-_119795663_119796405	0.0380286	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg18_v1_chr3_+_138020550_138020682	0.0380075	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	CR602043|TMEM22|80723|transmembrane protein 22	CR602057|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22	CR618483|TMEM22|80723|transmembrane protein 22
hg18_v1_chr3_-_152173475_152173475	0.0379936	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg18_v1_chr6_-_111243100_111243122	0.0379918	SOX2.p2	BC037289|CDK19|23097|cyclin-dependent kinase 19	NM_015076|CDK19|23097|cyclin-dependent kinase 19	AK292360|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_-_203985780_203985850	0.0379752	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr10_-_124595680_124595680	0.0379559	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg18_v1_chr2_+_61146866_61146866	0.0379085	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr16_+_24174374_24174376	0.0378566	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg18_v1_chr15_+_57067141_57067157	0.0376539	SOX2.p2	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr1_+_6607796_6607865	0.0376376	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR601567|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR609298|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR600833|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR620139|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr1_+_78888064_78888120	0.0375814	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr11_-_780103_780125	0.0375644	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr5_+_15553768_15553785	0.0374251	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr1_-_200182090_200182313	0.03738	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr21_+_26029542_26029597	0.0373722	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chrX_+_65152004_65152029	0.0372887	SOX2.p2	
hg18_v1_chr14_+_38720085_38720227	0.0372793	SOX2.p2	CR603037|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr5_-_137876416_137876489	0.0372748	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr15_-_99276933_99277061	0.0371016	SOX2.p2	
hg18_v1_chr5_+_140146059_140146059	0.0370426	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg18_v1_chr1_+_229731021_229731088	0.0370341	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg18_v1_chr15_+_64481270_64481273	0.0369927	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg18_v1_chr9_+_132990760_132990830	0.0369664	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg18_v1_chr18_-_71050268_71050319	0.0369587	SOX2.p2	BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	CR610486|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr14_-_20922001_20922018	0.0369289	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	CR616669|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr12_-_120591938_120591942	0.0369259	SOX2.p2	CR610648|MORN3|283385|MORN repeat containing 3	BC057760|MORN3|283385|MORN repeat containing 3	NM_173855|MORN3|283385|MORN repeat containing 3
hg18_v1_chr3_+_173043832_173043852	0.0368504	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg18_v1_chr5_+_86599902_86599920	0.0368238	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr14_-_23846993_23846995	0.0368187	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr12_-_53314891_53314945	0.0367698	SOX2.p2	AF238867|LACRT|90070|lacritin	BC069317|LACRT|90070|lacritin	NM_033277|LACRT|90070|lacritin	BC062217|LACRT|90070|lacritin
hg18_v1_chr1_-_200182338_200182340	0.0366718	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr11_-_88864061_88864380	0.0366365	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg18_v1_chr14_-_49170407_49170486	0.0365741	SOX2.p2	BC013322|C14orf104|55172|chromosome 14 open reading frame 104	BX248264|C14orf104|55172|chromosome 14 open reading frame 104	CR619602|C14orf104|55172|chromosome 14 open reading frame 104	BC011400|C14orf104|55172|chromosome 14 open reading frame 104	AK001425|C14orf104|55172|chromosome 14 open reading frame 104
hg18_v1_chr20_+_32755778_32755951	0.0365259	SOX2.p2	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr1_+_53300410_53300488	0.0364975	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_153703|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg18_v1_chr1_-_91259601_91259625	0.0364945	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr4_-_191185390_191185405	0.0364618	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001005217|FRG2|448831|FSHD region gene 2
hg18_v1_chrX_-_13745108_13745124	0.0364189	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg18_v1_chr17_-_40655347_40655423	0.0360261	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr5_-_133775491_133775506	0.0360019	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr10_+_86174665_86174686	0.0359525	SOX2.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr14_+_90650220_90650311	0.0358675	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr6_+_42639714_42639742	0.0358366	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr6_-_111242981_111243003	0.0358229	SOX2.p2	AJ420571|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr6_+_151228383_151228544	0.03582	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr6_+_88021644_88021755	0.0358141	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr14_-_75517198_75517250	0.0357839	SOX2.p2	AK313564|TGFB3|7043|transforming growth factor, beta 3	X14149|TGFB3|7043|transforming growth factor, beta 3	J03241|TGFB3|7043|transforming growth factor, beta 3
hg18_v1_chrX_+_86659370_86659552	0.0357489	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr21_+_26029602_26029672	0.035737	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr5_+_149526533_149526630	0.0356183	SOX2.p2	NM_001804|CDX1|1044|caudal type homeobox 1	AF239666|CDX1|1044|caudal type homeobox 1	U51095|CDX1|1044|caudal type homeobox 1	BC096249|CDX1|1044|caudal type homeobox 1	BC096250|CDX1|1044|caudal type homeobox 1	BC096251|CDX1|1044|caudal type homeobox 1	BC096252|CDX1|1044|caudal type homeobox 1	BC127122|CDX1|1044|caudal type homeobox 1
hg18_v1_chr15_-_57452361_57452364	0.035553	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg18_v1_chr15_+_99276982_99277089	0.0355502	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg18_v1_chr11_-_118167066_118167072	0.0353868	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chrX_+_22200950_22201008	0.0353816	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645
hg18_v1_chr2_-_170138558_170138669	0.0353469	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg18_v1_chr14_+_57964462_57964507	0.0353328	SOX2.p2	NM_014749|KIAA0586|9786|KIAA0586	BC066647|KIAA0586|9786|KIAA0586
hg18_v1_chrX_+_18618965_18618966	0.0352567	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg18_v1_chr5_+_43638495_43638698	0.0352243	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg18_v1_chr7_+_56086933_56086955	0.0351067	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr5_-_133775419_133775488	0.0350994	SOX2.p2	CR604625|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR612735|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR591520|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR602620|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr3_+_185516630_185516672	0.0350939	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr20_+_31219543_31219620	0.035026	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr5_-_88215034_88215049	0.0350253	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr17_-_2943039_2943039	0.0349555	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg18_v1_chr1_-_20985734_20985745	0.0347605	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr14_-_23847000_23847016	0.0347595	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr18_+_19973445_19973448	0.0347479	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg18_v1_chr2_+_131229477_131229693	0.0347414	SOX2.p2	AK289525|FAM123C|205147|family with sequence similarity 123C	NM_152698|FAM123C|205147|family with sequence similarity 123C	AK095696|FAM123C|205147|family with sequence similarity 123C	AK291424|FAM123C|205147|family with sequence similarity 123C	BC113445|FAM123C|205147|family with sequence similarity 123C	BC113447|FAM123C|205147|family with sequence similarity 123C	BC143806|FAM123C|205147|family with sequence similarity 123C	NM_001105193|FAM123C|205147|family with sequence similarity 123C
hg18_v1_chr1_+_42920946_42921397	0.0347048	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr2_+_231629869_231629980	0.0346371	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chrX_-_37916138_37916147	0.034618	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr4_-_140280031_140280055	0.0345884	SOX2.p2	AF256222|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)
hg18_v1_chr1_-_167822248_167822329	0.0345556	SOX2.p2	AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)	M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)	M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)
hg18_v1_chr5_+_137701855_137701909	0.0345399	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr1_-_51560469_51560525	0.0345129	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg18_v1_chr3_+_23822481_23822531	0.0344699	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr2_-_219614481_219614492	0.0344467	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg18_v1_chr19_-_46504831_46504973	0.0343856	SOX2.p2	
hg18_v1_chr14_-_23847024_23847028	0.0343264	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr7_+_71937980_71938091	0.0343012	SOX2.p2	CR607512|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR607679|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR599716|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR610804|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg18_v1_chr1_-_152162074_152162076	0.0342488	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr16_+_14201687_14201711	0.0342009	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr2_-_238164042_238164114	0.0341805	SOX2.p2	CR606784|RAB17|64284|RAB17, member RAS oncogene family	CR600396|RAB17|64284|RAB17, member RAS oncogene family	CR621894|RAB17|64284|RAB17, member RAS oncogene family	CR624533|RAB17|64284|RAB17, member RAS oncogene family	CR591120|RAB17|64284|RAB17, member RAS oncogene family	CR626220|RAB17|64284|RAB17, member RAS oncogene family	BC009827|RAB17|64284|RAB17, member RAS oncogene family	BC050426|RAB17|64284|RAB17, member RAS oncogene family	AL136645|RAB17|64284|RAB17, member RAS oncogene family
hg18_v1_chr2_+_66516020_66516035	0.0341666	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg18_v1_chr3_-_14964620_14964663	0.034165	SOX2.p2	
hg18_v1_chr20_+_30061905_30061913	0.0341379	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg18_v1_chr2_-_86276015_86276101	0.0340237	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr7_-_13996166_13996166	0.0340211	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg18_v1_chr10_+_22765996_22766014	0.0339747	SOX2.p2	AK295718|LOC100289455|100289455|hypothetical LOC100289455
hg18_v1_chr5_+_79651545_79651598	0.0338924	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr11_+_69165159_69165262	0.0338788	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg18_v1_chr9_-_14912419_14912433	0.0338443	SOX2.p2	
hg18_v1_chr9_-_131637361_131637380	0.033816	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	CR608293|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr6_+_118976134_118976183	0.0337049	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr7_-_143622233_143622296	0.0336376	SOX2.p2	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg18_v1_chr1_+_53253161_53253201	0.0336252	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg18_v1_chr20_-_1298493_1298697	0.0336245	SOX2.p2	CR615284|FKBP1A|2280|FK506 binding protein 1A, 12kDa	CR602019|FKBP1A|2280|FK506 binding protein 1A, 12kDa
hg18_v1_chr9_-_101621964_101622008	0.033553	SOX2.p2	
hg18_v1_chr21_+_32585994_32585994	0.033551	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr18_+_53862744_53862821	0.0335478	SOX2.p2	AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr20_-_36497328_36497445	0.0335396	SOX2.p2	BC012894|LOC388796|388796|hypothetical LOC388796	BC052370|LOC388796|388796|hypothetical LOC388796	CR614522|LOC388796|388796|hypothetical LOC388796	BC032119|LOC388796|388796|hypothetical LOC388796	CR601352|LOC388796|388796|hypothetical LOC388796	BX640887|LOC388796|388796|hypothetical LOC388796
hg18_v1_chr16_+_1246273_1246282	0.0335231	SOX2.p2	NM_012217|TPSD1|23430|tryptase delta 1	BC069143|TPSD1|23430|tryptase delta 1
hg18_v1_chr8_-_27525084_27525184	0.0334115	SOX2.p2	CR591665|CLU|1191|clusterin	NM_001171138|CLU|1191|clusterin
hg18_v1_chr6_-_15356865_15356895	0.0333742	SOX2.p2	
hg18_v1_chr15_+_20444164_20444192	0.033066	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr3_-_14964403_14964530	0.0330329	SOX2.p2	
hg18_v1_chr22_-_30072329_30072340	0.0330217	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr6_-_111243199_111243215	0.0330002	SOX2.p2	AY028424|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr6_+_17708483_17708674	0.0329845	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg18_v1_chr17_-_36996611_36996698	0.03298	SOX2.p2	BT007186|KRT14|3861|keratin 14	DQ890733|KRT14|3861|keratin 14	DQ892997|KRT14|3861|keratin 14	DQ893905|KRT14|3861|keratin 14	BC042437|KRT14|3861|keratin 14	BC002690|KRT14|3861|keratin 14	CR623868|KRT14|3861|keratin 14	CR613905|KRT14|3861|keratin 14	BC019097|KRT14|3861|keratin 14	BC094830|KRT14|3861|keratin 14	NM_000526|KRT14|3861|keratin 14	CR598848|KRT14|3861|keratin 14	CR603127|KRT14|3861|keratin 14	CR613487|KRT14|3861|keratin 14	CR618580|KRT14|3861|keratin 14	CR624973|KRT14|3861|keratin 14	CR626072|KRT14|3861|keratin 14
hg18_v1_chr14_-_69896056_69896142	0.032949	SOX2.p2	CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR594391|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR603105|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chrX_-_117134652_117134855	0.0329174	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr4_-_158111916_158111940	0.0328841	SOX2.p2	BC136662|PDGFC|56034|platelet derived growth factor C	BC144348|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr9_+_96561750_96561886	0.0328479	SOX2.p2	CR626537|C9orf3|84909|chromosome 9 open reading frame 3	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr1_-_84237316_84237453	0.0328469	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr3_+_73128771_73128849	0.0328368	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr1_+_26973804_26973947	0.0328312	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr5_+_137701852_137701854	0.0328224	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr15_+_67094087_67094124	0.0327801	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg18_v1_chr13_-_23369124_23369193	0.0327743	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr4_+_120167264_120167303	0.0327623	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg18_v1_chr3_-_71715431_71715905	0.032698	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr2_-_24160683_24160756	0.0326367	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	CR619579|TP53I3|9540|tumor protein p53 inducible protein 3
hg18_v1_chr19_-_50912429_50912478	0.0326131	SOX2.p2	
hg18_v1_chr14_-_69896146_69896200	0.0325905	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chr3_+_46258875_46258966	0.0325863	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg18_v1_chr6_-_139737432_139737476	0.0325498	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr10_+_70650064_70650110	0.0325165	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg18_v1_chr15_-_26240844_26240903	0.032507	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2
hg18_v1_chr9_+_103200939_103201191	0.0324917	SOX2.p2	AK290163|ZNF189|7743|zinc finger protein 189	AK313655|ZNF189|7743|zinc finger protein 189	AK308935|ZNF189|7743|zinc finger protein 189	NM_003452|ZNF189|7743|zinc finger protein 189	NM_197977|ZNF189|7743|zinc finger protein 189	BC065718|ZNF189|7743|zinc finger protein 189	BC092425|ZNF189|7743|zinc finger protein 189	AF025770|ZNF189|7743|zinc finger protein 189	U75454|ZNF189|7743|zinc finger protein 189	U95992|ZNF189|7743|zinc finger protein 189	BC126120|ZNF189|7743|zinc finger protein 189	BC143876|ZNF189|7743|zinc finger protein 189	BC143877|ZNF189|7743|zinc finger protein 189
hg18_v1_chr7_+_16759845_16760117	0.0324219	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	CR600961|TSPAN13|27075|tetraspanin 13	CR597593|TSPAN13|27075|tetraspanin 13	CR612419|TSPAN13|27075|tetraspanin 13	CR598448|TSPAN13|27075|tetraspanin 13	CR598804|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	CR591620|TSPAN13|27075|tetraspanin 13	CR602288|TSPAN13|27075|tetraspanin 13	CR612760|TSPAN13|27075|tetraspanin 13	CR612597|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg18_v1_chr9_+_96807107_96807126	0.0322946	SOX2.p2	CR626738|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr9_-_131637382_131637419	0.0322733	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chrX_-_135790509_135790529	0.0322632	SOX2.p2	CR597391|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr2_-_136311219_136311219	0.0322115	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr7_-_99536929_99536965	0.0321914	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr16_+_30993252_30993279	0.0321782	SOX2.p2	BC035589|ZNF646|9726|zinc finger protein 646
hg18_v1_chr20_+_60311334_60311417	0.0321776	SOX2.p2	CR594238|ADRM1|11047|adhesion regulating molecule 1	AK307459|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr7_-_41709191_41709230	0.0321442	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg18_v1_chr12_+_130945215_130945237	0.032137	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg18_v1_chr2_-_208598452_208598567	0.0321258	SOX2.p2	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3	NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3
hg18_v1_chr20_+_31713750_31713802	0.0319143	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	CR617586|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg18_v1_chr2_-_73817935_73818024	0.0318565	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg18_v1_chr12_+_70366140_70366153	0.0317836	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg18_v1_chr21_-_31175722_31175744	0.0317813	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg18_v1_chr10_+_98582005_98582082	0.0317045	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr5_+_139008052_139008065	0.0316985	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chrX_-_130251068_130251119	0.0316854	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr16_+_67724039_67724069	0.0316699	SOX2.p2	AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chrX_-_63342209_63342394	0.0316191	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg18_v1_chrX_-_13866366_13866425	0.031549	SOX2.p2	
hg18_v1_chr6_-_32268615_32268693	0.0315075	SOX2.p2	CR623296|GPSM3|63940|G-protein signaling modulator 3	CR604341|GPSM3|63940|G-protein signaling modulator 3	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr22_-_34566276_34566297	0.0314238	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr7_+_116289833_116289911	0.0313632	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr7_+_74017015_74017018	0.0313219	SOX2.p2	BC147030|GATSL2|729438|GATS protein-like 2	BC147031|GATSL2|729438|GATS protein-like 2	NM_001145063|GATSL1|389523|GATS protein-like 1
hg18_v1_chr3_+_192529567_192530154	0.0313105	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr19_-_22171592_22171592	0.0312419	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg18_v1_chr16_+_2504001_2504105	0.0312374	SOX2.p2	CR600796|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR590083|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR616464|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr15_+_89444185_89444242	0.0312367	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr5_-_138238891_138238934	0.0312271	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr20_+_25336320_25336325	0.0312033	SOX2.p2	BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr1_-_20986345_20986383	0.031193	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3	CR599334|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr11_+_60885983_60886316	0.0311783	SOX2.p2	NM_016464|TMEM138|51524|transmembrane protein 138	CR596588|TMEM138|51524|transmembrane protein 138
hg18_v1_chr20_+_34667624_34667812	0.0311356	SOX2.p2	BC004446|C20orf24|55969|chromosome 20 open reading frame 24	BC001871|C20orf24|55969|chromosome 20 open reading frame 24	CR597224|C20orf24|55969|chromosome 20 open reading frame 24	AF274936|C20orf24|55969|chromosome 20 open reading frame 24	S83364|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr1_-_23568854_23568945	0.0310627	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg18_v1_chr2_-_158439868_158439868	0.0310357	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg18_v1_chr7_-_104949787_104950008	0.0309389	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr2_+_69995807_69995966	0.0309365	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr4_-_95482994_95483049	0.0308457	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr1_-_20985747_20985771	0.0307589	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr8_-_7710547_7710647	0.030756	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr8_-_33490094_33490244	0.0307535	SOX2.p2	AK026916|C8orf41|80185|chromosome 8 open reading frame 41	BX648410|C8orf41|80185|chromosome 8 open reading frame 41	BC007387|C8orf41|80185|chromosome 8 open reading frame 41	BC066935|C8orf41|80185|chromosome 8 open reading frame 41	NM_025115|C8orf41|80185|chromosome 8 open reading frame 41	NM_001102401|C8orf41|80185|chromosome 8 open reading frame 41
hg18_v1_chr4_+_72078255_72078416	0.0307382	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr12_+_381001_381083	0.0307225	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	CR618406|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr10_-_127559841_127559873	0.0306623	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg18_v1_chr9_-_122382079_122382270	0.0306597	SOX2.p2	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2
hg18_v1_chr22_+_19601940_19602066	0.0305443	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr2_-_224410544_224410564	0.0305225	SOX2.p2	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr6_-_28412130_28412130	0.0305061	SOX2.p2	NM_030899|ZNF323|64288|zinc finger protein 323
hg18_v1_chr11_+_69165119_69165143	0.0304417	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg18_v1_chrX_+_47999740_47999753	0.0304219	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg18_v1_chr14_-_60260780_60260841	0.0304122	SOX2.p2	AK309358|SIX4|51804|SIX homeobox 4
hg18_v1_chr2_+_101235782_101235867	0.0303401	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr11_-_2970055_2970097	0.0303339	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr16_+_52081836_52081927	0.0303153	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr10_+_91164283_91164364	0.030244	SOX2.p2	NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg18_v1_chr8_-_105548323_105548460	0.0301576	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg18_v1_chr3_-_15814678_15814694	0.0301353	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr18_-_46978029_46978048	0.0301068	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr11_-_118167073_118167106	0.0301059	SOX2.p2	Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr12_-_100979893_100979921	0.0300857	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr11_-_5819702_5819702	0.0300712	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr12_-_54965996_54966141	0.0299874	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg18_v1_chr15_+_60838053_60838080	0.0299539	SOX2.p2	BX648144|TLN2|83660|talin 2	BX648146|TLN2|83660|talin 2
hg18_v1_chr10_-_21847126_21847194	0.0299006	SOX2.p2	
hg18_v1_chr9_+_131974506_131974763	0.0298946	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr9_+_122877056_122877110	0.0298848	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr15_-_41381744_41381744	0.0297739	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg18_v1_chr17_+_34279637_34279643	0.0297634	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg18_v1_chr12_+_54172413_54172413	0.0297369	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr9_-_131637360_131637360	0.0296138	SOX2.p2	CR604621|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr8_-_125785611_125785615	0.0296073	SOX2.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr16_+_87164342_87164398	0.0295874	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr9_-_35105844_35105911	0.0295744	SOX2.p2	AK022837|KIAA1539|80256|KIAA1539	AK021622|KIAA1539|80256|KIAA1539	BC004406|KIAA1539|80256|KIAA1539	NM_025182|KIAA1539|80256|KIAA1539	AK307682|KIAA1539|80256|KIAA1539
hg18_v1_chr14_+_90650109_90650208	0.02954	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr11_+_62893836_62894104	0.0294522	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg18_v1_chrX_+_69404879_69404926	0.029365	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg18_v1_chr12_-_6586811_6586824	0.0293062	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr3_-_110155237_110155366	0.0292843	SOX2.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr22_+_18081968_18082117	0.0292836	SOX2.p2	CR605683|SEPT5|5413|septin 5	CR609437|SEPT5|5413|septin 5	NM_002688|SEPT5|5413|septin 5	CR608884|SEPT5|5413|septin 5	CR608991|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	CR619352|SEPT5|5413|septin 5	CR610263|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR597468|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg18_v1_chr7_-_148212310_148212311	0.0292729	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr3_+_113200696_113200959	0.0292712	SOX2.p2	NM_001008273|TAGLN3|29114|transgelin 3	CR591700|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg18_v1_chr2_-_213724577_213724577	0.0292633	SOX2.p2	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr11_+_13646727_13646805	0.0291993	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr20_+_58004811_58004823	0.0291844	SOX2.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg18_v1_chr16_-_67723928_67723948	0.0291821	SOX2.p2	BC018700|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr11_+_123282307_123282348	0.02913	SOX2.p2	BC137180|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	BC137206|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	NM_001005197|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4
hg18_v1_chr9_-_113130533_113130533	0.0290921	SOX2.p2	BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2	NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2
hg18_v1_chr7_-_130004119_130004151	0.0290752	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chr12_+_10973100_10973179	0.0290585	SOX2.p2	BX641094|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_005042|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC095488|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538206|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538207|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647155|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648436|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648871|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_001110213|PRH2|5555|proline-rich protein HaeIII subfamily 2	CR749583|PRH2|5555|proline-rich protein HaeIII subfamily 2	K03202|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647156|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC141916|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC136499|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648656|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648901|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647085|PRH2|5555|proline-rich protein HaeIII subfamily 2
hg18_v1_chr1_-_17638729_17638795	0.0290228	SOX2.p2	AB040903|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr3_+_38282301_38282400	0.0289776	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg18_v1_chr20_-_44151971_44152065	0.02897	SOX2.p2	NM_020967|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr16_+_70053681_70053698	0.0289139	SOX2.p2	
hg18_v1_chr5_-_36912487_36912554	0.0288957	SOX2.p2	AK000901|LOC646719|646719|hypothetical LOC646719
hg18_v1_chr4_-_100461530_100461594	0.0288953	SOX2.p2	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg18_v1_chr19_-_62759536_62759536	0.0288797	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg18_v1_chr19_-_21742162_21742269	0.0288678	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg18_v1_chr11_+_65164767_65164895	0.0288539	SOX2.p2	AK310068|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr6_-_32268267_32268419	0.0288127	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr20_-_34005799_34005876	0.0288015	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_016558|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr3_+_123996560_123996653	0.0287921	SOX2.p2	NM_032839|DIRC2|84925|disrupted in renal carcinoma 2	AK027690|DIRC2|84925|disrupted in renal carcinoma 2	AK291176|DIRC2|84925|disrupted in renal carcinoma 2	BC039821|DIRC2|84925|disrupted in renal carcinoma 2	BC033738|DIRC2|84925|disrupted in renal carcinoma 2
hg18_v1_chr19_-_18578577_18578629	0.0286335	SOX2.p2	AF059293|CRLF1|9244|cytokine receptor-like factor 1	BC044634|CRLF1|9244|cytokine receptor-like factor 1	AY358291|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chrX_-_2857315_2857348	0.0285925	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg18_v1_chr2_+_170298487_170298676	0.0285873	SOX2.p2	
hg18_v1_chr1_+_151873134_151873170	0.028523	SOX2.p2	AF261137|C1orf77|26097|chromosome 1 open reading frame 77	NM_015607|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr3_-_123766113_123766212	0.0285226	SOX2.p2	AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9
hg18_v1_chr6_-_111243023_111243067	0.0285098	SOX2.p2	AB028951|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr20_+_35407872_35407970	0.0285076	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg18_v1_chrX_-_128805400_128805619	0.0285044	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr20_-_33793507_33793590	0.0284493	SOX2.p2	BC008204|RBM39|9584|RNA binding motif protein 39	BC141835|RBM39|9584|RNA binding motif protein 39	BC158172|RBM39|9584|RNA binding motif protein 39	AK303910|RBM39|9584|RNA binding motif protein 39	AK297060|RBM39|9584|RNA binding motif protein 39	AL833168|RBM39|9584|RNA binding motif protein 39	CR619114|RBM39|9584|RNA binding motif protein 39	AK299165|RBM39|9584|RNA binding motif protein 39	CR749443|RBM39|9584|RNA binding motif protein 39	AK299678|RBM39|9584|RNA binding motif protein 39	BX640714|RBM39|9584|RNA binding motif protein 39	BX640812|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr2_-_10870254_10870305	0.0283687	SOX2.p2	DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6	DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6	CR618905|PDIA6|10130|protein disulfide isomerase family A, member 6	AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chr6_-_90119169_90119300	0.0281891	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr6_-_27943287_27943349	0.0281424	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg18_v1_chrX_-_140164294_140164313	0.0281333	SOX2.p2	AJ238277|SPANXC|64663|SPANX family, member C	NM_022661|SPANXC|64663|SPANX family, member C	BC054023|SPANXC|64663|SPANX family, member C	AK225988|SPANXC|64663|SPANX family, member C
hg18_v1_chr7_-_139825802_139825837	0.0281213	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr8_-_72918938_72919048	0.0281207	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg18_v1_chr1_+_70459592_70459666	0.028077	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr7_-_99536966_99536981	0.0280739	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr1_-_201422450_201422458	0.0280425	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr4_+_1872150_1872179	0.0280129	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr19_+_49972965_49973027	0.0280098	SOX2.p2	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c
hg18_v1_chr1_+_159435728_159435728	0.0279728	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg18_v1_chr9_+_81377289_81377399	0.0279166	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr22_+_17012841_17012964	0.0278699	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr5_+_1854493_1854531	0.0278651	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg18_v1_chr1_+_43410587_43410679	0.0277812	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	NM_001167966|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg18_v1_chr5_+_85949518_85949628	0.0277455	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ891355|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ894536|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr7_+_55400634_55400634	0.0277401	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr3_-_195835197_195835231	0.0275782	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44
hg18_v1_chr14_-_50068928_50069192	0.0275718	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr2_-_136005238_136005275	0.0275328	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg18_v1_chr3_-_195835298_195835497	0.0274876	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr10_+_70418482_70418600	0.0274855	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	CR593211|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg18_v1_chr20_+_30259359_30259359	0.0274679	SOX2.p2	D80002|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr6_+_31815703_31815845	0.0274461	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6ORF26|100532732|MSH5-C6orf26 read-through transcript	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg18_v1_chr3_-_123617571_123617644	0.0274179	SOX2.p2	BC025762|WDR5B|54554|WD repeat domain 5B	NM_019069|WDR5B|54554|WD repeat domain 5B	CR592490|WDR5B|54554|WD repeat domain 5B
hg18_v1_chr4_+_71806538_71806631	0.027343	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	CR598922|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg18_v1_chr1_+_246703249_246703274	0.0272761	SOX2.p2	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3
hg18_v1_chr13_-_44673174_44673174	0.0272612	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg18_v1_chr18_+_31074985_31075104	0.0272542	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr10_+_82287637_82287637	0.0272124	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg18_v1_chr16_+_49333461_49333510	0.0272011	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr16_-_3008162_3008188	0.0271965	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	CR614114|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg18_v1_chrX_-_153952447_153952836	0.0271721	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr1_+_153560351_153560351	0.0271679	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg18_v1_chr20_-_30795463_30795474	0.0271418	SOX2.p2	AK096307|COMMD7|149951|COMM domain containing 7	BC022073|COMMD7|149951|COMM domain containing 7	NM_001099339|COMMD7|149951|COMM domain containing 7	NM_053041|COMMD7|149951|COMM domain containing 7
hg18_v1_chr1_+_191295206_191295216	0.0271287	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg18_v1_chr1_-_24179419_24179539	0.0270513	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr7_-_44854145_44854179	0.0270378	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg18_v1_chr12_+_22669352_22669477	0.0270234	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr4_-_2233606_2233637	0.0270019	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr14_+_75141557_75141557	0.0269034	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr15_-_84139021_84139181	0.0268856	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr15_+_78775008_78775120	0.0268484	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg18_v1_chr11_-_6633427_6633651	0.0268343	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr19_+_60878238_60878380	0.0268305	SOX2.p2	NM_001130072|EPN1|29924|epsin 1	NM_013333|EPN1|29924|epsin 1
hg18_v1_chr6_-_108386000_108386011	0.0268062	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr19_-_864203_864223	0.0267546	SOX2.p2	CR616662|C19orf22|91300|chromosome 19 open reading frame 22	CR619216|C19orf22|91300|chromosome 19 open reading frame 22	CR616128|C19orf22|91300|chromosome 19 open reading frame 22	CR614470|C19orf22|91300|chromosome 19 open reading frame 22	CR622307|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr12_+_6473519_6473535	0.0266933	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr4_-_100492854_100492939	0.0266541	SOX2.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg18_v1_chr4_-_175441192_175441426	0.0266261	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	CR592920|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	CR617381|FBXO8|26269|F-box protein 8	CR620156|FBXO8|26269|F-box protein 8	CR620476|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg18_v1_chr19_+_57492236_57492262	0.0266226	SOX2.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chr5_-_150517528_150517635	0.0266179	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg18_v1_chr8_+_26296439_26296563	0.0266036	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr13_+_27092846_27093085	0.0265183	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr1_-_115102138_115102193	0.0264755	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr22_-_30072217_30072314	0.0264139	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr7_-_37454933_37455054	0.0263129	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr11_+_34029764_34029814	0.0262883	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr14_+_59020894_59021067	0.0262586	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr11_+_58146721_58146801	0.0262149	SOX2.p2	BC069167|CNTF|1270|ciliary neurotrophic factor	NM_000614|CNTF|1270|ciliary neurotrophic factor	BC068030|CNTF|1270|ciliary neurotrophic factor	AK314118|CNTF|1270|ciliary neurotrophic factor	BC074963|CNTF|1270|ciliary neurotrophic factor	BC074964|CNTF|1270|ciliary neurotrophic factor	S72921|CNTF|1270|ciliary neurotrophic factor
hg18_v1_chr7_+_23112441_23112441	0.0262012	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg18_v1_chr10_-_32675848_32676089	0.0261541	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr10_+_104253706_104253713	0.0261463	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr11_-_58368555_58368574	0.0261256	SOX2.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr2_-_171998681_171998864	0.0260878	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	CR612022|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg18_v1_chr16_-_67723511_67723562	0.0260161	SOX2.p2	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr7_-_99536852_99536928	0.0260044	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr10_-_99084254_99084320	0.0259945	SOX2.p2	BT009770|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	DQ895557|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg18_v1_chr5_-_134762791_134762810	0.0259778	SOX2.p2	CR597742|H2AFY|9555|H2A histone family, member Y	CR618845|H2AFY|9555|H2A histone family, member Y	CR600032|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr19_-_18409971_18410110	0.0258128	SOX2.p2	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1	AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1
hg18_v1_chrX_+_70420237_70420257	0.0257274	SOX2.p2	CR605046|NONO|4841|non-POU domain containing, octamer-binding	CR614502|NONO|4841|non-POU domain containing, octamer-binding	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr12_-_6668085_6668085	0.0257036	SOX2.p2	NM_001039916|ZNF384|171017|zinc finger protein 384
hg18_v1_chr22_+_18485145_18485170	0.0256973	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg18_v1_chr5_+_14493905_14493927	0.0256709	SOX2.p2	CR620371|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr15_-_80125514_80125549	0.0256436	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr2_+_208284691_208284800	0.0256348	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr12_+_49155798_49155910	0.0255694	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chrX_-_10548458_10548673	0.0255301	SOX2.p2	AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)	AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)	Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)	BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr18_-_20105900_20105919	0.0255173	SOX2.p2	AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A
hg18_v1_chr7_-_64088848_64088848	0.0254899	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chr5_-_150517499_150517526	0.0254744	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chr17_-_77094426_77094495	0.0253241	SOX2.p2	CR595732|ACTG1|71|actin, gamma 1
hg18_v1_chr7_+_87401368_87401670	0.0253136	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr14_-_22722680_22722745	0.0252997	SOX2.p2	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8
hg18_v1_chr5_-_179040580_179040580	0.0252788	SOX2.p2	NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)
hg18_v1_chr9_+_106306275_106306364	0.0252276	SOX2.p2	BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1	NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1
hg18_v1_chr12_+_22669275_22669345	0.0252256	SOX2.p2	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr17_-_2977594_2977708	0.025223	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg18_v1_chr6_+_123152044_123152189	0.0251495	SOX2.p2	CR620022|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr9_+_114376709_114376794	0.025094	SOX2.p2	AK056181|KIAA1958|158405|KIAA1958
hg18_v1_chr16_-_57221235_57221239	0.0250886	SOX2.p2	AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg18_v1_chr2_+_169021001_169021010	0.0250684	SOX2.p2	AK172775|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr15_+_41450642_41450844	0.0250552	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg18_v1_chr12_-_104002348_104002542	0.0250391	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr11_-_5279750_5279751	0.0250283	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr16_-_56038771_56038940	0.0250272	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chrX_+_70360184_70360282	0.0250009	SOX2.p2	BT019329|GJB1|2705|gap junction protein, beta 1, 32kDa	DQ893515|GJB1|2705|gap junction protein, beta 1, 32kDa	DQ896494|GJB1|2705|gap junction protein, beta 1, 32kDa
hg18_v1_chr17_-_24163517_24163629	0.0249919	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr19_+_9334695_9334695	0.0249789	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr2_+_61243132_61243132	0.0249526	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr19_-_864201_864201	0.0248973	SOX2.p2	CR606082|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr4_+_25931725_25931744	0.0248803	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	CR624016|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr15_-_89276657_89276824	0.0248662	SOX2.p2	CR625970|HDDC3|374659|HD domain containing 3	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg18_v1_chr12_+_6473552_6473558	0.0248249	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr11_-_64302777_64302891	0.0248078	SOX2.p2	L49345|SF1|7536|splicing factor 1	L49380|SF1|7536|splicing factor 1	BC032676|SF1|7536|splicing factor 1	BC020217|SF1|7536|splicing factor 1	BC069273|SF1|7536|splicing factor 1	D26120|SF1|7536|splicing factor 1	D26121|SF1|7536|splicing factor 1	AK301803|SF1|7536|splicing factor 1	BC034451|SF1|7536|splicing factor 1	NM_004630|SF1|7536|splicing factor 1	NM_201995|SF1|7536|splicing factor 1	NM_201997|SF1|7536|splicing factor 1	NM_201998|SF1|7536|splicing factor 1
hg18_v1_chr4_-_120769590_120769631	0.0247904	SOX2.p2	
hg18_v1_chr4_+_39874921_39875152	0.0247681	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	CR619539|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	CR607001|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg18_v1_chr3_-_197726587_197726633	0.0247504	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr14_+_95899602_95899660	0.0247382	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr16_+_87164158_87164309	0.024712	SOX2.p2	NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr3_-_140677990_140678047	0.0246986	SOX2.p2	BC069296|RBP2|5948|retinol binding protein 2, cellular	BC069361|RBP2|5948|retinol binding protein 2, cellular	BC069396|RBP2|5948|retinol binding protein 2, cellular	BC069424|RBP2|5948|retinol binding protein 2, cellular	BC069447|RBP2|5948|retinol binding protein 2, cellular	BC069469|RBP2|5948|retinol binding protein 2, cellular	BC069513|RBP2|5948|retinol binding protein 2, cellular	BC069522|RBP2|5948|retinol binding protein 2, cellular	U13831|RBP2|5948|retinol binding protein 2, cellular	NM_004164|RBP2|5948|retinol binding protein 2, cellular	AK291978|RBP2|5948|retinol binding protein 2, cellular
hg18_v1_chr5_+_86599800_86599845	0.0246426	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr16_+_30993223_30993247	0.0246409	SOX2.p2	NM_014699|ZNF646|9726|zinc finger protein 646	AK304808|ZNF646|9726|zinc finger protein 646
hg18_v1_chr2_+_231629852_231629868	0.0246295	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr9_-_131637321_131637359	0.0245765	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr7_+_116289765_116289821	0.02456	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr17_+_23723180_23723191	0.0245518	SOX2.p2	AY444166|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr4_-_151990061_151990138	0.024547	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr9_+_132961683_132961715	0.0245393	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg18_v1_chr6_-_53034547_53034642	0.0245133	SOX2.p2	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr13_-_31900218_31900499	0.024479	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg18_v1_chr20_+_41519882_41519930	0.0244789	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr7_-_44854092_44854114	0.0243924	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg18_v1_chr19_+_3523950_3523957	0.0243917	SOX2.p2	BC002552|HMG20B|10362|high-mobility group 20B	AK289500|HMG20B|10362|high-mobility group 20B	BC003505|HMG20B|10362|high-mobility group 20B
hg18_v1_chr5_+_96023479_96023535	0.0243696	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg18_v1_chr12_-_8656705_8656722	0.0243441	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr6_-_27890496_27890585	0.0243168	SOX2.p2	BC066232|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066233|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066234|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066235|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066236|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066237|HIST1H2AJ|8331|histone cluster 1, H2aj	NM_021066|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133048|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133050|HIST1H2AJ|8331|histone cluster 1, H2aj
hg18_v1_chr5_-_141981083_141981090	0.0243082	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr22_+_25398690_25398790	0.024246	SOX2.p2	AK026502|LOC388889|388889|hypothetical LOC388889
hg18_v1_chr12_-_30740011_30740064	0.0242132	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chr3_-_57301749_57301749	0.0241965	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr8_-_133140808_133140808	0.0241034	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr1_-_201422436_201422448	0.0240801	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	CR602274|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr17_-_77421980_77422078	0.0240611	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr17_-_53946899_53946983	0.0239706	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr20_+_41519947_41520087	0.0239697	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	CR605163|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	CR606848|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr2_-_131838200_131838200	0.0239561	SOX2.p2	NM_001077637|LOC150786|150786|RAB6C-like
hg18_v1_chrX_+_102498035_102498118	0.0239446	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5	CR613173|WBP5|51186|WW domain binding protein 5
hg18_v1_chr7_-_139825602_139825660	0.0238697	SOX2.p2	CR601180|MKRN1|23608|makorin ring finger protein 1	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr11_-_113776262_113776507	0.023865	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71	CR597454|C11orf71|54494|chromosome 11 open reading frame 71
hg18_v1_chr11_-_65871592_65871742	0.0237723	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr6_+_111386455_111386591	0.023754	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg18_v1_chr13_+_47775901_47775944	0.0236713	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr19_-_55008172_55008419	0.0236291	SOX2.p2	CR592794|FUZ|80199|fuzzy homolog (Drosophila)	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	CR609003|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	CR613541|FUZ|80199|fuzzy homolog (Drosophila)	CR616619|FUZ|80199|fuzzy homolog (Drosophila)	CR621655|FUZ|80199|fuzzy homolog (Drosophila)	CR595499|FUZ|80199|fuzzy homolog (Drosophila)	CR607071|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg18_v1_chr11_-_61340804_61340951	0.0236188	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	CR611884|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	CR597486|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr12_-_55686466_55686571	0.0234723	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg18_v1_chr10_-_13430195_13430351	0.0234669	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr19_-_864224_864230	0.0233963	SOX2.p2	CR596729|C19orf22|91300|chromosome 19 open reading frame 22	NM_138774|C19orf22|91300|chromosome 19 open reading frame 22	CR614472|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chrX_+_52797004_52797070	0.0233865	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg18_v1_chr7_+_137795719_137795833	0.0233516	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr22_+_37740232_37740312	0.0233377	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg18_v1_chr7_+_116289827_116289828	0.023322	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr17_+_43480724_43480779	0.0232983	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr16_-_18480763_18480950	0.0232342	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg18_v1_chr5_+_137542652_137542777	0.0232236	SOX2.p2	CR598555|KIF20A|10112|kinesin family member 20A	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg18_v1_chr20_-_1420126_1420142	0.0231966	SOX2.p2	AK297072|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr13_+_51056484_51056592	0.0231318	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg18_v1_chr6_+_12824873_12824985	0.0230803	SOX2.p2	AK295263|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr5_+_86599982_86600036	0.0230714	SOX2.p2	
hg18_v1_chr5_-_134762738_134762758	0.0230699	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr2_+_11597530_11597579	0.0230356	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr2_+_173129040_173129102	0.0230339	SOX2.p2	AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	CR594556|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg18_v1_chr1_-_242681860_242682062	0.0230207	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr5_+_55069601_55069665	0.0229955	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr7_-_95063738_95063860	0.0229953	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg18_v1_chr3_-_61703850_61703852	0.0229874	SOX2.p2	
hg18_v1_chr4_-_152155827_152155909	0.0229674	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr3_+_161956689_161956689	0.0229595	SOX2.p2	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr2_+_238200922_238201274	0.0228972	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr2_+_39746525_39746618	0.0228951	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr3_-_195835593_195835712	0.0228548	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr1_+_76312962_76313138	0.0228169	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr1_+_23990228_23990297	0.0228004	SOX2.p2	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr1_+_28717234_28717346	0.0227924	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr20_+_60311419_60311441	0.0227832	SOX2.p2	NM_007002|ADRM1|11047|adhesion regulating molecule 1	NM_175573|ADRM1|11047|adhesion regulating molecule 1	CR601588|ADRM1|11047|adhesion regulating molecule 1	CR603214|ADRM1|11047|adhesion regulating molecule 1	CR591215|ADRM1|11047|adhesion regulating molecule 1	CR608688|ADRM1|11047|adhesion regulating molecule 1	CR624663|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr8_+_36760999_36761058	0.0227739	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg18_v1_chr20_+_30259235_30259357	0.0226909	SOX2.p2	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr6_-_53321545_53321652	0.022674	SOX2.p2	AK125098|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	CR597148|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr3_+_44746101_44746127	0.0226445	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg18_v1_chr4_-_141896920_141896979	0.0226222	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg18_v1_chr2_+_182558795_182558993	0.0225555	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr1_+_154449389_154449448	0.0225325	SOX2.p2	AK124646|PMF1|11243|polyamine-modulated factor 1	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	CR616631|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg18_v1_chr13_+_30672122_30672298	0.0225288	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr7_+_107008439_107008453	0.0225128	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr5_-_14706486_14706500	0.0224271	SOX2.p2	
hg18_v1_chr2_-_45691887_45691936	0.0223993	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg18_v1_chr2_+_11591692_11591692	0.0223892	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr6_-_31890765_31890813	0.0223476	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg18_v1_chr1_+_224064427_224064474	0.0223258	SOX2.p2	CR593306|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR612904|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR625608|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr6_-_11887265_11887265	0.0223045	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg18_v1_chr12_-_119391918_119391996	0.0222866	SOX2.p2	CR603096|SRSF9|8683|serine/arginine-rich splicing factor 9	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr17_+_19492427_19493043	0.0222526	SOX2.p2	U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR591336|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2
hg18_v1_chr19_-_20540380_20540470	0.0222325	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg18_v1_chr16_-_11588257_11588324	0.0222172	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	CR612710|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	CR612810|LITAF|9516|lipopolysaccharide-induced TNF factor	CR623629|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg18_v1_chr1_-_159282312_159282370	0.0222091	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg18_v1_chr12_-_7739591_7739655	0.0221452	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr2_-_224410444_224410542	0.0221327	SOX2.p2	AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr4_+_140806371_140806509	0.0220805	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr19_+_50086299_50086349	0.0220768	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr12_+_368774_368821	0.0220486	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr17_+_23722689_23722825	0.022042	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr7_+_20008870_20008879	0.0219855	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr3_+_189413414_189413414	0.0218715	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr7_-_136678901_136678916	0.0218676	SOX2.p2	CR596476|PTN|5764|pleiotrophin	AK290488|PTN|5764|pleiotrophin
hg18_v1_chr8_-_18585721_18585904	0.0218582	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr5_-_150517454_150517495	0.0218542	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg18_v1_chr14_+_64041170_64041223	0.0218309	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr8_+_90839336_90839503	0.0218203	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr1_-_70443748_70443849	0.0218129	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg18_v1_chr11_-_7775064_7775095	0.0217629	SOX2.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr14_-_59020878_59020883	0.0217572	SOX2.p2	
hg18_v1_chr2_+_219354948_219355323	0.0217359	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR623283|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR590744|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr3_-_127138571_127138576	0.021702	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg18_v1_chr2_+_233093416_233093416	0.0216199	SOX2.p2	NM_001195129|LOC646960|646960|trypsin serine protease-like
hg18_v1_chr4_+_53975597_53975627	0.0215995	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr1_+_22176004_22176129	0.0215865	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg18_v1_chr5_-_22889487_22889487	0.0215633	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr15_+_54998115_54998124	0.0215419	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr7_+_56086871_56086929	0.0214885	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr2_-_119840727_119840889	0.0214503	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg18_v1_chr5_+_99899133_99899205	0.0214301	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr9_+_94766379_94766403	0.0214019	SOX2.p2	CR591538|FGD3|89846|FYVE, RhoGEF and PH domain containing 3
hg18_v1_chr8_+_10567556_10567580	0.0213956	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74
hg18_v1_chr3_+_157071141_157071157	0.0213948	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr6_+_25387630_25387645	0.0213494	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg18_v1_chr12_-_119391884_119391894	0.0213467	SOX2.p2	CR606248|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr3_-_161650294_161650341	0.0213333	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg18_v1_chr12_-_119391897_119391910	0.021296	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr9_+_131637472_131637538	0.0212622	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr11_-_10546654_10546940	0.0212592	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR598862|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614245|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR604450|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR612000|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614790|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR599107|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR595979|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR597409|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR605021|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg18_v1_chr2_-_159021201_159021510	0.0212554	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg18_v1_chr4_-_39655554_39655912	0.0211711	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr10_+_104253716_104253903	0.0211086	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr6_+_43257883_43257902	0.0210442	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg18_v1_chr20_+_34667605_34667622	0.0210293	SOX2.p2	CR611434|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr7_-_104696678_104696761	0.0209886	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg18_v1_chr11_+_113776504_113776578	0.0209801	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr12_-_26169074_26169303	0.0209661	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chr18_+_37789209_37789254	0.0209589	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg18_v1_chr13_+_30672087_30672119	0.0209516	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr14_+_69148062_69148065	0.0209468	SOX2.p2	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg18_v1_chr1_-_20986385_20986428	0.0209432	SOX2.p2	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr10_+_70517823_70517861	0.0209035	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr8_-_110411283_110411338	0.0208915	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr5_-_122786902_122787184	0.0208902	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg18_v1_chr2_+_72968009_72968068	0.0208824	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg18_v1_chr4_+_154293719_154293719	0.0208634	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr7_+_73709991_73710126	0.0208317	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg18_v1_chr3_+_113200275_113200591	0.0208306	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3	CR600116|TAGLN3|29114|transgelin 3
hg18_v1_chr11_+_125586828_125586917	0.0207757	SOX2.p2	NM_024556|FAM118B|79607|family with sequence similarity 118, member B	CR625659|FAM118B|79607|family with sequence similarity 118, member B	AK315615|FAM118B|79607|family with sequence similarity 118, member B	CR617403|FAM118B|79607|family with sequence similarity 118, member B	CR599154|FAM118B|79607|family with sequence similarity 118, member B	CR623279|FAM118B|79607|family with sequence similarity 118, member B	AK024756|FAM118B|79607|family with sequence similarity 118, member B	AK225081|FAM118B|79607|family with sequence similarity 118, member B	BC001647|FAM118B|79607|family with sequence similarity 118, member B
hg18_v1_chr17_-_36113502_36113527	0.0207098	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	CR607026|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg18_v1_chr17_-_53335748_53335748	0.0206112	SOX2.p2	AK000746|CUEDC1|404093|CUE domain containing 1	NM_017949|CUEDC1|404093|CUE domain containing 1
hg18_v1_chr6_+_7053863_7053942	0.0205816	SOX2.p2	BX647723|RREB1|6239|ras responsive element binding protein 1
hg18_v1_chr19_+_9295854_9296020	0.0204232	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript
hg18_v1_chr8_+_76482661_76482825	0.0203905	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr12_-_10893318_10893341	0.0203574	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg18_v1_chr10_+_124310170_124310262	0.0203447	SOX2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg18_v1_chr1_+_181028016_181028016	0.0203239	SOX2.p2	AF338436|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
hg18_v1_chr11_-_73559507_73559926	0.0203173	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg18_v1_chr11_-_75769514_75769799	0.0203146	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg18_v1_chr6_-_26305456_26305495	0.0202853	SOX2.p2	DQ892795|HIST1H3D|8351|histone cluster 1, H3d	DQ896042|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr15_+_64372686_64372713	0.0202372	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr14_+_19993181_19993195	0.0202275	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr17_-_77094375_77094425	0.0202239	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	CR595991|ACTG1|71|actin, gamma 1	CR620790|ACTG1|71|actin, gamma 1	CR610111|ACTG1|71|actin, gamma 1	CR612408|ACTG1|71|actin, gamma 1	CR623642|ACTG1|71|actin, gamma 1	CR590591|ACTG1|71|actin, gamma 1	CR594098|ACTG1|71|actin, gamma 1	CR598828|ACTG1|71|actin, gamma 1	CR610162|ACTG1|71|actin, gamma 1	CR610710|ACTG1|71|actin, gamma 1	CR612488|ACTG1|71|actin, gamma 1	CR612527|ACTG1|71|actin, gamma 1	CR613019|ACTG1|71|actin, gamma 1	CR615078|ACTG1|71|actin, gamma 1	CR615292|ACTG1|71|actin, gamma 1	CR615976|ACTG1|71|actin, gamma 1	CR617657|ACTG1|71|actin, gamma 1	CR618764|ACTG1|71|actin, gamma 1	CR626452|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	CR600687|ACTG1|71|actin, gamma 1	CR591798|ACTG1|71|actin, gamma 1	CR594425|ACTG1|71|actin, gamma 1	CR595246|ACTG1|71|actin, gamma 1	CR595791|ACTG1|71|actin, gamma 1	CR596062|ACTG1|71|actin, gamma 1	CR596102|ACTG1|71|actin, gamma 1	CR596522|ACTG1|71|actin, gamma 1	CR597843|ACTG1|71|actin, gamma 1	CR599592|ACTG1|71|actin, gamma 1	CR599978|ACTG1|71|actin, gamma 1	CR600128|ACTG1|71|actin, gamma 1	CR601583|ACTG1|71|actin, gamma 1	CR602480|ACTG1|71|actin, gamma 1	CR602599|ACTG1|71|actin, gamma 1	CR604033|ACTG1|71|actin, gamma 1	CR606124|ACTG1|71|actin, gamma 1	CR606241|ACTG1|71|actin, gamma 1	CR606346|ACTG1|71|actin, gamma 1	CR609318|ACTG1|71|actin, gamma 1	CR610496|ACTG1|71|actin, gamma 1	CR610665|ACTG1|71|actin, gamma 1	CR611108|ACTG1|71|actin, gamma 1	CR611432|ACTG1|71|actin, gamma 1	CR611536|ACTG1|71|actin, gamma 1	CR612114|ACTG1|71|actin, gamma 1	CR612705|ACTG1|71|actin, gamma 1	CR614439|ACTG1|71|actin, gamma 1	CR614891|ACTG1|71|actin, gamma 1	CR615028|ACTG1|71|actin, gamma 1	CR616983|ACTG1|71|actin, gamma 1	CR617404|ACTG1|71|actin, gamma 1	CR617643|ACTG1|71|actin, gamma 1	CR617915|ACTG1|71|actin, gamma 1	CR619691|ACTG1|71|actin, gamma 1	CR619966|ACTG1|71|actin, gamma 1	CR620836|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	CR591159|ACTG1|71|actin, gamma 1	CR595688|ACTG1|71|actin, gamma 1	CR596065|ACTG1|71|actin, gamma 1	CR598534|ACTG1|71|actin, gamma 1	CR609723|ACTG1|71|actin, gamma 1	CR612862|ACTG1|71|actin, gamma 1	CR616609|ACTG1|71|actin, gamma 1	CR616966|ACTG1|71|actin, gamma 1	CR617867|ACTG1|71|actin, gamma 1	CR619914|ACTG1|71|actin, gamma 1	CR620218|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	CR597515|ACTG1|71|actin, gamma 1	CR592121|ACTG1|71|actin, gamma 1	CR592736|ACTG1|71|actin, gamma 1	CR593892|ACTG1|71|actin, gamma 1	CR601927|ACTG1|71|actin, gamma 1	CR602348|ACTG1|71|actin, gamma 1	CR610810|ACTG1|71|actin, gamma 1	CR625364|ACTG1|71|actin, gamma 1	CR626577|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	CR597492|ACTG1|71|actin, gamma 1	CR597615|ACTG1|71|actin, gamma 1	CR597885|ACTG1|71|actin, gamma 1	CR599672|ACTG1|71|actin, gamma 1	CR612443|ACTG1|71|actin, gamma 1	CR617232|ACTG1|71|actin, gamma 1	CR620630|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	CR590228|ACTG1|71|actin, gamma 1	CR590320|ACTG1|71|actin, gamma 1	CR590603|ACTG1|71|actin, gamma 1	CR591211|ACTG1|71|actin, gamma 1	CR592707|ACTG1|71|actin, gamma 1	CR594922|ACTG1|71|actin, gamma 1	CR595093|ACTG1|71|actin, gamma 1	CR595449|ACTG1|71|actin, gamma 1	CR597397|ACTG1|71|actin, gamma 1	CR597456|ACTG1|71|actin, gamma 1	CR598076|ACTG1|71|actin, gamma 1	CR598244|ACTG1|71|actin, gamma 1	CR598734|ACTG1|71|actin, gamma 1	CR599814|ACTG1|71|actin, gamma 1	CR599830|ACTG1|71|actin, gamma 1	CR599892|ACTG1|71|actin, gamma 1	CR605191|ACTG1|71|actin, gamma 1	CR608951|ACTG1|71|actin, gamma 1	CR609271|ACTG1|71|actin, gamma 1	CR609909|ACTG1|71|actin, gamma 1	CR610691|ACTG1|71|actin, gamma 1	CR611607|ACTG1|71|actin, gamma 1	CR612364|ACTG1|71|actin, gamma 1	CR614730|ACTG1|71|actin, gamma 1	CR616006|ACTG1|71|actin, gamma 1	CR616940|ACTG1|71|actin, gamma 1	CR616969|ACTG1|71|actin, gamma 1	CR618617|ACTG1|71|actin, gamma 1	CR619367|ACTG1|71|actin, gamma 1	CR619574|ACTG1|71|actin, gamma 1	CR620806|ACTG1|71|actin, gamma 1	CR621813|ACTG1|71|actin, gamma 1	CR621873|ACTG1|71|actin, gamma 1	CR622814|ACTG1|71|actin, gamma 1	CR623020|ACTG1|71|actin, gamma 1	CR623123|ACTG1|71|actin, gamma 1	CR625920|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	CR590980|ACTG1|71|actin, gamma 1	CR591079|ACTG1|71|actin, gamma 1	CR591509|ACTG1|71|actin, gamma 1	CR591533|ACTG1|71|actin, gamma 1	CR594416|ACTG1|71|actin, gamma 1	CR596618|ACTG1|71|actin, gamma 1	CR598395|ACTG1|71|actin, gamma 1	CR600669|ACTG1|71|actin, gamma 1	CR600832|ACTG1|71|actin, gamma 1	CR602399|ACTG1|71|actin, gamma 1	CR609414|ACTG1|71|actin, gamma 1	CR615214|ACTG1|71|actin, gamma 1	CR615511|ACTG1|71|actin, gamma 1	CR621190|ACTG1|71|actin, gamma 1	CR603777|ACTG1|71|actin, gamma 1	CR604825|ACTG1|71|actin, gamma 1	CR606117|ACTG1|71|actin, gamma 1	CR621390|ACTG1|71|actin, gamma 1	CR592239|ACTG1|71|actin, gamma 1	CR592652|ACTG1|71|actin, gamma 1	CR592730|ACTG1|71|actin, gamma 1	CR594198|ACTG1|71|actin, gamma 1	CR596575|ACTG1|71|actin, gamma 1	CR598831|ACTG1|71|actin, gamma 1	CR598898|ACTG1|71|actin, gamma 1	CR602227|ACTG1|71|actin, gamma 1	CR603085|ACTG1|71|actin, gamma 1	CR603639|ACTG1|71|actin, gamma 1	CR603981|ACTG1|71|actin, gamma 1	CR604519|ACTG1|71|actin, gamma 1	CR605598|ACTG1|71|actin, gamma 1	CR606439|ACTG1|71|actin, gamma 1	CR609401|ACTG1|71|actin, gamma 1	CR611433|ACTG1|71|actin, gamma 1	CR615212|ACTG1|71|actin, gamma 1	CR618978|ACTG1|71|actin, gamma 1	CR620121|ACTG1|71|actin, gamma 1	CR621747|ACTG1|71|actin, gamma 1	CR623145|ACTG1|71|actin, gamma 1	CR624265|ACTG1|71|actin, gamma 1	CR625300|ACTG1|71|actin, gamma 1	CR590376|ACTG1|71|actin, gamma 1	CR594480|ACTG1|71|actin, gamma 1	CR594511|ACTG1|71|actin, gamma 1	CR595096|ACTG1|71|actin, gamma 1	CR597169|ACTG1|71|actin, gamma 1	CR599678|ACTG1|71|actin, gamma 1	CR600758|ACTG1|71|actin, gamma 1	CR602472|ACTG1|71|actin, gamma 1	CR604384|ACTG1|71|actin, gamma 1	CR604531|ACTG1|71|actin, gamma 1	CR605767|ACTG1|71|actin, gamma 1	CR607909|ACTG1|71|actin, gamma 1	CR611625|ACTG1|71|actin, gamma 1	CR615291|ACTG1|71|actin, gamma 1	CR619007|ACTG1|71|actin, gamma 1	CR622024|ACTG1|71|actin, gamma 1	CR622438|ACTG1|71|actin, gamma 1	CR624836|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	CR613104|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1	NM_001614|ACTG1|71|actin, gamma 1	CR622164|ACTG1|71|actin, gamma 1
hg18_v1_chr10_+_90414125_90414195	0.0202226	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr8_+_145136571_145136631	0.020201	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr12_-_3732614_3732672	0.0201917	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr11_-_123261549_123261549	0.0201873	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg18_v1_chr20_-_61039672_61039702	0.0201307	SOX2.p2	BC004237|DIDO1|11083|death inducer-obliterator 1	AB002331|DIDO1|11083|death inducer-obliterator 1	AK002127|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr2_+_86801081_86801300	0.0201266	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr7_-_44834702_44834741	0.0200943	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chr16_+_464844_464857	0.0200939	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg18_v1_chr9_+_114288899_114289068	0.0200853	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr2_+_31310383_31310468	0.0200045	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg18_v1_chr4_-_17415918_17416015	0.0200023	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr16_-_11587647_11587729	0.0199298	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg18_v1_chr3_-_129023850_129024390	0.0198615	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr7_-_135263737_135263901	0.0198355	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6	CR625657|MTPN|136319|myotrophin	CR611568|MTPN|136319|myotrophin	CR599361|MTPN|136319|myotrophin
hg18_v1_chr11_+_58980986_58981009	0.019824	SOX2.p2	BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6
hg18_v1_chr17_+_40141714_40141813	0.0198195	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr6_-_100123124_100123232	0.0197475	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg18_v1_chr7_+_73709974_73709987	0.0197288	SOX2.p2	BC070484|GTF2I|2969|general transcription factor IIi
hg18_v1_chr19_+_16105837_16105837	0.0197175	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr16_+_10745174_10745317	0.0197077	SOX2.p2	AK310089|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	NM_002484|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK307148|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK223204|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC100290|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR600910|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR613650|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109322|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109323|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR622882|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR601815|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)
hg18_v1_chr1_-_159282376_159282407	0.0197001	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg18_v1_chr3_+_184453547_184453738	0.0195733	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr19_+_4983899_4983900	0.0195684	SOX2.p2	
hg18_v1_chr17_-_30724732_30724832	0.0195153	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr4_-_103485600_103485715	0.0195078	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr8_-_78075834_78075834	0.0194261	SOX2.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr17_-_77422400_77422461	0.0193403	SOX2.p2	
hg18_v1_chr5_+_85949511_85949517	0.0193266	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr20_-_33793593_33793675	0.0192953	SOX2.p2	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr5_+_134237808_134238094	0.0192169	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	CR616649|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	CR613338|TXNDC15|79770|thioredoxin domain containing 15	CR613370|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	CR601239|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg18_v1_chr2_-_44440358_44440391	0.0192147	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg18_v1_chr9_-_14388981_14388981	0.0191632	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr20_+_42399039_42399039	0.0190745	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg18_v1_chr11_+_116608447_116608839	0.0190341	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg18_v1_chr21_-_32026258_32026270	0.0190058	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr5_-_134762785_134762790	0.018934	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y	CR624310|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_+_224317036_224317043	0.0189004	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr4_+_77214886_77214900	0.0188814	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg18_v1_chr12_+_54080480_54080579	0.0188744	SOX2.p2	BC136897|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	BC136899|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	NM_001005518|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65
hg18_v1_chr3_+_180763432_180763439	0.0187924	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A	CR594699|ACTL6A|86|actin-like 6A
hg18_v1_chr7_+_142670711_142670738	0.0187651	SOX2.p2	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	CR597274|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	CR613327|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1	CR605600|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr1_+_6607511_6607511	0.0186979	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr2_-_65210695_65210752	0.0186878	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	CR616184|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg18_v1_chr17_-_36074812_36074941	0.0186213	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg18_v1_chr19_-_864194_864200	0.0185727	SOX2.p2	CR624510|C19orf22|91300|chromosome 19 open reading frame 22	BC012775|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr6_+_37895244_37895293	0.0185379	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr7_+_148523486_148523759	0.0185031	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg18_v1_chr5_+_121325554_121325626	0.0185013	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg18_v1_chr17_-_64823368_64823368	0.0185003	SOX2.p2	AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5	NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5
hg18_v1_chr6_+_123151669_123151669	0.0184843	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr11_-_111255354_111255390	0.0184786	SOX2.p2	AK302630|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg18_v1_chr17_-_60988226_60988234	0.0184634	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg18_v1_chr10_-_98315090_98315173	0.0184448	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr20_+_51023159_51023212	0.0184443	SOX2.p2	AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr2_-_47235929_47236020	0.0184343	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr5_-_156502363_156502498	0.018386	SOX2.p2	NM_001100816|MED7|9443|mediator complex subunit 7	AF031383|MED7|9443|mediator complex subunit 7	CR617029|MED7|9443|mediator complex subunit 7	BC005250|MED7|9443|mediator complex subunit 7	BC006968|MED7|9443|mediator complex subunit 7	AK308393|MED7|9443|mediator complex subunit 7	NM_004270|MED7|9443|mediator complex subunit 7
hg18_v1_chr12_-_3732478_3732580	0.0183849	SOX2.p2	BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B	AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr10_-_33663984_33664025	0.0183701	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg18_v1_chrX_+_46191567_46191744	0.0183559	SOX2.p2	NM_001129898|ZNF673|55634|zinc finger family member 673	NM_001129899|ZNF673|55634|zinc finger family member 673	NM_001129900|ZNF673|55634|zinc finger family member 673	NM_017776|ZNF673|55634|zinc finger family member 673	AK289703|ZNF673|55634|zinc finger family member 673	AK096413|ZNF673|55634|zinc finger family member 673	AK000351|ZNF673|55634|zinc finger family member 673
hg18_v1_chr1_-_239865724_239865854	0.0183442	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chr16_-_1772305_1772567	0.0183399	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR622113|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR604082|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR596537|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR595592|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR592259|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR605628|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR610957|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR624932|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR591468|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr2_-_215957927_215957938	0.0183397	SOX2.p2	U42458|FN1|2335|fibronectin 1
hg18_v1_chr12_-_38123027_38123505	0.0183392	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	CR624607|KIF21A|55605|kinesin family member 21A	CR624190|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg18_v1_chr6_-_79732391_79732552	0.018339	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr9_+_35031101_35031101	0.0183257	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr8_+_23442413_23442524	0.0183139	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	CR592142|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr1_-_198645788_198645846	0.018277	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr6_+_3204133_3204182	0.0182438	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr6_+_84626146_84626220	0.0182278	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr1_+_100590640_100590743	0.018207	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr18_+_54681040_54681159	0.0181647	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr4_+_2789686_2789737	0.0180976	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr10_-_44775110_44775116	0.0180916	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr4_-_44348414_44348414	0.0179781	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr3_-_56673113_56673113	0.0179529	SOX2.p2	BC029354|C3orf63|23272|chromosome 3 open reading frame 63	NM_015224|C3orf63|23272|chromosome 3 open reading frame 63
hg18_v1_chr14_+_19993129_19993165	0.0179472	SOX2.p2	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr17_-_53964360_53964362	0.0179302	SOX2.p2	BC018055|SEPT4|5414|septin 4
hg18_v1_chr3_+_198961620_198961657	0.0178605	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr17_-_40263704_40263706	0.0177988	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	CR594677|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr10_-_50402148_50402364	0.0177753	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr1_+_2026014_2026014	0.0177732	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg18_v1_chr1_-_151333624_151333624	0.0177692	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr12_+_99185334_99185679	0.0177597	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr9_+_130684189_130684219	0.0177035	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr20_-_33793591_33793591	0.0176996	SOX2.p2	BX537770|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr5_+_140790141_140790268	0.017695	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr17_+_39503623_39503837	0.0176937	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR624359|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR601615|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR595523|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR623861|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607320|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR613351|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR590248|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR609384|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598130|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR608514|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR597546|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR622205|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR625794|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR615676|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR619652|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598996|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR591259|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR605360|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607017|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg18_v1_chr7_-_27158726_27158741	0.0176706	SOX2.p2	
hg18_v1_chr5_-_60493985_60494063	0.0175959	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	CR599620|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr12_+_52713098_52713169	0.0175573	SOX2.p2	NM_018953|HOXC5|3222|homeobox C5
hg18_v1_chr6_-_47385205_47385242	0.0174988	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr20_+_47269371_47269384	0.0174963	SOX2.p2	BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg18_v1_chr1_-_232810111_232810187	0.0174506	SOX2.p2	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2
hg18_v1_chr12_+_6751930_6752049	0.0174108	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg18_v1_chr8_-_103206310_103206310	0.0173961	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg18_v1_chr6_+_43257903_43257928	0.0173429	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg18_v1_chrX_+_149902415_149902515	0.0173259	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chrX_+_122145776_122146067	0.0173219	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg18_v1_chr4_+_88961573_88961586	0.0173216	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg18_v1_chr10_+_69314347_69314480	0.0173168	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chr12_-_109424260_109424327	0.0172621	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr11_-_56951088_56951127	0.0172486	SOX2.p2	AK311394|SLC43A3|29015|solute carrier family 43, member 3	NM_014096|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr14_+_95915774_95915774	0.0172083	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr5_-_24535386_24535386	0.0172031	SOX2.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chr20_-_4752067_4752321	0.0171959	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr4_+_76868830_76868849	0.0171924	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr2_+_203901160_203901600	0.0171731	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr9_-_122877231_122877272	0.0171686	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr3_+_157874898_157874898	0.0171388	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr15_-_40570585_40570648	0.0170922	SOX2.p2	AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg18_v1_chr1_-_205161821_205162000	0.0170732	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	CR625287|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg18_v1_chr3_-_161766055_161766110	0.0170703	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr2_+_218698980_218699089	0.0170397	SOX2.p2	NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2	U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2	L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2	U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2	BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2	AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2	AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2
hg18_v1_chr2_+_183651756_183652032	0.0170391	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg18_v1_chr10_-_123677370_123677661	0.017027	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg18_v1_chr7_-_143523582_143523723	0.0169469	SOX2.p2	BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg18_v1_chr1_+_50347188_50347355	0.0169426	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR613627|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr17_-_70770036_70770038	0.0169356	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg18_v1_chr22_+_19601619_19601720	0.0168912	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr19_-_864138_864189	0.0168787	SOX2.p2	CR608111|C19orf22|91300|chromosome 19 open reading frame 22	CR615271|C19orf22|91300|chromosome 19 open reading frame 22	CR592767|C19orf22|91300|chromosome 19 open reading frame 22	CR617180|C19orf22|91300|chromosome 19 open reading frame 22	CR617940|C19orf22|91300|chromosome 19 open reading frame 22	CR599301|C19orf22|91300|chromosome 19 open reading frame 22	CR597374|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chrX_-_117003310_117003403	0.0168776	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr2_-_85969527_85969667	0.0168404	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chr1_+_32889335_32889545	0.0167967	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr1_-_74971679_74971679	0.01677	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr1_+_100590619_100590638	0.0167266	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr2_+_231629839_231629851	0.0166786	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr12_-_100748640_100748794	0.0166696	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr6_-_132980901_132980924	0.0165938	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr18_-_71050034_71050166	0.0165473	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr16_+_2503676_2503894	0.0165468	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr7_+_148475618_148475766	0.0165445	SOX2.p2	AY049744|ZNF398|57541|zinc finger protein 398
hg18_v1_chr22_+_18485057_18485066	0.0165151	SOX2.p2	CR590513|RANBP1|5902|RAN binding protein 1
hg18_v1_chr4_+_88075176_88075303	0.0164936	SOX2.p2	AK296149|AFF1|4299|AF4/FMR2 family, member 1	NM_001166693|AFF1|4299|AF4/FMR2 family, member 1	AK300364|AFF1|4299|AF4/FMR2 family, member 1	BC017432|AFF1|4299|AF4/FMR2 family, member 1
hg18_v1_chr7_-_129632452_129632573	0.0164534	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg18_v1_chr2_+_8739563_8739745	0.0164255	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR607131|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR626410|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR620423|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR611001|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR614653|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg18_v1_chr14_+_38805251_38805252	0.0164201	SOX2.p2	AF338233|CTAGE5|4253|CTAGE family, member 5	NM_203356|CTAGE5|4253|CTAGE family, member 5
hg18_v1_chr2_+_32356475_32356482	0.0164192	SOX2.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr19_+_55985483_55985483	0.0163686	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg18_v1_chr19_+_40831061_40831068	0.0163634	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr9_-_35101592_35101619	0.0163406	SOX2.p2	CR601417|KIAA1539|80256|KIAA1539
hg18_v1_chr18_-_20106187_20106193	0.0163405	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg18_v1_chr15_+_54998144_54998177	0.016331	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg18_v1_chr1_-_201097253_201097358	0.0163016	SOX2.p2	
hg18_v1_chr17_-_35510074_35510423	0.0162483	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg18_v1_chr2_-_108517028_108517127	0.016233	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr7_+_102502816_102502845	0.0162121	SOX2.p2	AK075500|ARMC10|83787|armadillo repeat containing 10	CR613788|ARMC10|83787|armadillo repeat containing 10	AK301565|ARMC10|83787|armadillo repeat containing 10	AK225082|ARMC10|83787|armadillo repeat containing 10	AK291818|ARMC10|83787|armadillo repeat containing 10	BC003586|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr12_+_109424387_109424530	0.0161729	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg18_v1_chr1_-_17637639_17637658	0.0161675	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr18_-_46977687_46977734	0.0161542	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr17_+_40655060_40655226	0.0161487	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg18_v1_chr2_+_130453704_130453706	0.0161304	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg18_v1_chr16_+_2503994_2504000	0.0160945	SOX2.p2	CR597229|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr17_+_25730107_25730124	0.0160924	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	U65090|CPD|1362|carboxypeptidase D
hg18_v1_chr1_+_28936030_28936219	0.0160898	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	CR599207|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	CR593745|YTHDF2|51441|YTH domain family, member 2	CR595878|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr15_+_89248423_89248423	0.0160577	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg18_v1_chr18_-_58946858_58946972	0.0160371	SOX2.p2	AF401211|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chr5_+_156628929_156628939	0.0159412	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr7_+_5904858_5904955	0.015929	SOX2.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr19_-_58157832_58157935	0.0159133	SOX2.p2	BC105739|ZNF816|125893|zinc finger protein 816	BC105740|ZNF816|125893|zinc finger protein 816	BC105930|ZNF816|125893|zinc finger protein 816	AK316503|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough	AK291990|ZNF816|125893|zinc finger protein 816	BC063805|ZNF816|125893|zinc finger protein 816	NM_001031665|ZNF816|125893|zinc finger protein 816	CR749224|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough
hg18_v1_chr1_+_24944554_24944631	0.0158997	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg18_v1_chr11_+_62231741_62231882	0.0158861	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr3_-_121652183_121652872	0.0158675	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg18_v1_chr6_+_126702914_126703012	0.0158474	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg18_v1_chr20_+_34667590_34667596	0.0158473	SOX2.p2	CR624571|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr20_-_61317891_61318046	0.0158364	SOX2.p2	BC050284|YTHDF1|54915|YTH domain family, member 1	NM_017798|YTHDF1|54915|YTH domain family, member 1
hg18_v1_chr9_-_98104206_98104254	0.0158343	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg18_v1_chr20_+_43691797_43691832	0.0158071	SOX2.p2	CR598861|WFDC10A|140832|WAP four-disulfide core domain 10A	AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A	NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A	BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A
hg18_v1_chr7_+_102502852_102503055	0.0157905	SOX2.p2	CR618507|ARMC10|83787|armadillo repeat containing 10	CR613957|ARMC10|83787|armadillo repeat containing 10	AF275808|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr16_+_87164311_87164312	0.0157638	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr4_-_111777651_111777678	0.0157609	SOX2.p2	CR605855|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr11_+_64705989_64706042	0.0157454	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg18_v1_chr5_-_156935317_156935449	0.0157326	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr11_+_113436438_113436497	0.0157172	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg18_v1_chr3_+_120496180_120496440	0.0156921	SOX2.p2	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31	BC112163|ARHGAP31|57514|Rho GTPase activating protein 31	BC112165|ARHGAP31|57514|Rho GTPase activating protein 31
hg18_v1_chr16_+_79626817_79627211	0.0156728	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr19_+_977624_977625	0.0156077	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr7_-_100325209_100325274	0.0155834	SOX2.p2	BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)
hg18_v1_chr19_+_3523958_3523999	0.0155723	SOX2.p2	AK314201|HMG20B|10362|high-mobility group 20B	AK090733|HMG20B|10362|high-mobility group 20B	AK310601|HMG20B|10362|high-mobility group 20B	AF318366|HMG20B|10362|high-mobility group 20B
hg18_v1_chr1_+_224317056_224317059	0.0155604	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr6_+_127706189_127706320	0.015559	SOX2.p2	
hg18_v1_chr16_+_64958086_64958120	0.0155221	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr3_+_99370233_99370233	0.0155186	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr13_+_96592051_96592116	0.0154835	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chr4_-_113777569_113777599	0.0154546	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr6_-_31853027_31853086	0.0154455	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg18_v1_chr3_+_45705918_45705961	0.0153316	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg18_v1_chr4_-_2233504_2233596	0.015312	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr20_+_61039803_61039999	0.0152968	SOX2.p2	NM_017896|C20orf11|54994|chromosome 20 open reading frame 11	BC032120|C20orf11|54994|chromosome 20 open reading frame 11	AK299509|C20orf11|54994|chromosome 20 open reading frame 11	AK000609|C20orf11|54994|chromosome 20 open reading frame 11
hg18_v1_chr6_+_30799130_30799944	0.0152358	SOX2.p2	BC001896|TUBB|203068|tubulin, beta	CR623734|TUBB|203068|tubulin, beta	DQ457058|TUBB|203068|tubulin, beta	CR609320|TUBB|203068|tubulin, beta	BC029323|TUBB|203068|tubulin, beta	BC015889|TUBB|203068|tubulin, beta	CR603884|TUBB|203068|tubulin, beta	CR595288|TUBB|203068|tubulin, beta	CR621096|TUBB|203068|tubulin, beta	CR610916|TUBB|203068|tubulin, beta	CR598257|TUBB|203068|tubulin, beta	CR620192|TUBB|203068|tubulin, beta	CR601330|TUBB|203068|tubulin, beta	CR620319|TUBB|203068|tubulin, beta	CR620286|TUBB|203068|tubulin, beta	CR614676|TUBB|203068|tubulin, beta	CR617749|TUBB|203068|tubulin, beta	CR596743|TUBB|203068|tubulin, beta	BC001002|TUBB|203068|tubulin, beta	EF036509|TUBB|203068|tubulin, beta	CR606806|TUBB|203068|tubulin, beta	CR598437|TUBB|203068|tubulin, beta
hg18_v1_chrX_-_84521320_84521384	0.0152159	SOX2.p2	AK314295|POF1B|79983|premature ovarian failure, 1B	AK025039|POF1B|79983|premature ovarian failure, 1B	AK290360|POF1B|79983|premature ovarian failure, 1B	BC017500|POF1B|79983|premature ovarian failure, 1B
hg18_v1_chr4_-_120769275_120769428	0.0152008	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr12_+_53901075_53901075	0.0151946	SOX2.p2	NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7
hg18_v1_chr10_-_25052549_25052675	0.0151872	SOX2.p2	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21	NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21
hg18_v1_chr1_-_154988084_154988085	0.0151554	SOX2.p2	CR593023|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr14_-_22549168_22549199	0.0151488	SOX2.p2	BC014299|C14orf93|60686|chromosome 14 open reading frame 93	CR604681|C14orf93|60686|chromosome 14 open reading frame 93	BX161507|C14orf93|60686|chromosome 14 open reading frame 93	BX161383|C14orf93|60686|chromosome 14 open reading frame 93	BX161417|C14orf93|60686|chromosome 14 open reading frame 93	CR594518|C14orf93|60686|chromosome 14 open reading frame 93	AK023026|C14orf93|60686|chromosome 14 open reading frame 93	AK022216|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93	NM_021944|C14orf93|60686|chromosome 14 open reading frame 93
hg18_v1_chr20_-_30703219_30703443	0.01512	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg18_v1_chr19_+_3713650_3713670	0.0150625	SOX2.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr8_+_23160098_23160277	0.0150516	SOX2.p2	AK092500|CHMP7|91782|CHMP family, member 7	AL833843|CHMP7|91782|CHMP family, member 7	BC019110|CHMP7|91782|CHMP family, member 7	AK296592|CHMP7|91782|CHMP family, member 7	BC004344|CHMP7|91782|CHMP family, member 7
hg18_v1_chr3_-_169295752_169295867	0.0150273	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr3_-_45242808_45242850	0.0149245	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr9_-_139202831_139202842	0.0149145	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chrX_-_16798096_16798360	0.0148649	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	CR611848|RBBP7|5931|retinoblastoma binding protein 7	CR620066|RBBP7|5931|retinoblastoma binding protein 7	CR624515|RBBP7|5931|retinoblastoma binding protein 7	CR596205|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7	CR615058|RBBP7|5931|retinoblastoma binding protein 7	CR592155|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chrX_-_2857351_2857426	0.0148584	SOX2.p2	AK314479|ARSD|414|arylsulfatase D	AK021472|ARSD|414|arylsulfatase D	NM_001669|ARSD|414|arylsulfatase D	NM_009589|ARSD|414|arylsulfatase D	X83572|ARSD|414|arylsulfatase D
hg18_v1_chrX_+_153318452_153318533	0.0148467	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr10_-_102035938_102036103	0.0148237	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg18_v1_chr20_+_30259360_30259424	0.0148157	SOX2.p2	CR617950|POFUT1|23509|protein O-fucosyltransferase 1	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr12_+_111375382_111375523	0.0148131	SOX2.p2	EU779706|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11
hg18_v1_chr2_-_86276102_86276231	0.0147985	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr20_-_2592777_2592892	0.0147622	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615180|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR618774|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR611698|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615874|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR616056|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR614771|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr14_+_89933118_89933244	0.0147386	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR592381|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR618763|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR590380|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR591035|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR604747|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR619428|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR595745|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR626701|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr11_+_46256161_46256238	0.014658	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr1_+_10995265_10995330	0.0146462	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr19_+_40900757_40900784	0.0146459	SOX2.p2	AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4
hg18_v1_chr17_-_40348378_40348439	0.0146426	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr19_+_46462189_46462367	0.0146323	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr3_+_171183203_171183212	0.0146294	SOX2.p2	CR596837|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr22_+_18485095_18485118	0.0146117	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg18_v1_chr3_+_152970904_152970937	0.0145552	SOX2.p2	BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene
hg18_v1_chr3_+_14964080_14964239	0.0145551	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chrX_-_130250715_130250715	0.0145546	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr1_-_198645455_198645609	0.0145409	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg18_v1_chr1_+_224317030_224317035	0.0145399	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr19_+_38263625_38263625	0.0145035	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chrX_-_151370325_151370486	0.014481	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg18_v1_chr11_-_125730622_125730642	0.0144711	SOX2.p2	
hg18_v1_chr3_-_48344834_48344834	0.0144702	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr2_+_32356492_32356576	0.0144622	SOX2.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr5_+_150137700_150137700	0.0144321	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg18_v1_chr9_+_131637539_131637548	0.0143817	SOX2.p2	BC033669|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr4_+_156899575_156899733	0.014361	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr12_-_8706746_8706753	0.014312	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr6_+_84626083_84626112	0.0142748	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr16_-_69114931_69114960	0.0142618	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg18_v1_chr10_-_116241572_116241622	0.0142597	SOX2.p2	
hg18_v1_chr2_-_169455167_169455208	0.0142433	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	CR590224|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr1_+_200124620_200124808	0.0142412	SOX2.p2	BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	CR626801|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr2_-_152740387_152740806	0.0141803	SOX2.p2	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg18_v1_chr10_+_70517863_70517960	0.0141663	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr10_-_127361583_127361702	0.0141333	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	CR611441|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg18_v1_chr20_+_47269361_47269370	0.014103	SOX2.p2	AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg18_v1_chr1_-_52116598_52116646	0.0140758	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr2_+_32142083_32142326	0.0140652	SOX2.p2	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg18_v1_chr20_-_30794857_30794972	0.0140582	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg18_v1_chr22_+_16020241_16020288	0.0140513	SOX2.p2	AF307448|CECR4|100130717|cat eye syndrome chromosome region, candidate 4 (non-protein coding)
hg18_v1_chr1_+_50342168_50342168	0.0140382	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr12_-_47532171_47532228	0.014026	SOX2.p2	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg18_v1_chr1_-_17637398_17637500	0.0140114	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr1_-_37792414_37792541	0.014	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg18_v1_chrX_+_108666725_108666765	0.0139984	SOX2.p2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr15_-_71712605_71712670	0.0139916	SOX2.p2	CR615564|NPTN|27020|neuroplastin	CR615149|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg18_v1_chr4_+_170778303_170778562	0.0139681	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg18_v1_chr2_+_127130209_127130315	0.0139494	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr1_+_29011240_29011240	0.0139483	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg18_v1_chr19_-_18578631_18578661	0.0139231	SOX2.p2	AF073515|CRLF1|9244|cytokine receptor-like factor 1	NM_004750|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chr10_-_43212166_43212284	0.0139066	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr11_+_60448487_60448535	0.0138886	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg18_v1_chr22_+_27994216_27994339	0.0138872	SOX2.p2	CR625247|EWSR1|2130|Ewing sarcoma breakpoint region 1	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604952|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR608375|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604639|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg18_v1_chr2_+_169465995_169466046	0.0138614	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg18_v1_chr16_+_30326077_30326235	0.0138586	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr14_-_52689680_52689756	0.0138317	SOX2.p2	DQ315474|DDHD1|80821|DDHD domain containing 1	GU376468|DDHD1|80821|DDHD domain containing 1	BC030703|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr3_-_130373241_130373306	0.013818	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR596443|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR597317|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR606309|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR610184|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR614312|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR626515|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg18_v1_chr1_-_224563820_224563820	0.0137772	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr5_+_140703784_140703786	0.0137566	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr12_-_242255_242299	0.0137523	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg18_v1_chr2_+_114935623_114935649	0.0137372	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chrX_+_70420221_70420233	0.0136726	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding	CR597886|NONO|4841|non-POU domain containing, octamer-binding	CR619917|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr10_+_91451313_91451398	0.0136417	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg18_v1_chr17_-_24426752_24426752	0.0136001	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg18_v1_chr11_+_59001421_59001478	0.0135793	SOX2.p2	BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10
hg18_v1_chrX_+_122923236_122923272	0.0135711	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr7_-_143230096_143230300	0.0135673	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr1_+_45789111_45789229	0.0135518	SOX2.p2	BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR598490|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616743|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR617059|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR614844|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR621968|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR613190|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR605893|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR600290|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616472|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR604674|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR606043|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)
hg18_v1_chr19_+_3523903_3523949	0.0135343	SOX2.p2	NM_006339|HMG20B|10362|high-mobility group 20B
hg18_v1_chr2_+_9900933_9901121	0.0135342	SOX2.p2	CR622846|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	CR606132|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
hg18_v1_chr11_-_5247948_5247948	0.0135278	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg18_v1_chr9_+_130684248_130684299	0.0135062	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr16_+_73590739_73590783	0.0135048	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg18_v1_chrX_-_13745234_13745239	0.0134273	SOX2.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg18_v1_chr12_-_119391794_119391880	0.0134263	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	CR607246|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	CR615364|SRSF9|8683|serine/arginine-rich splicing factor 9	CR617389|SRSF9|8683|serine/arginine-rich splicing factor 9	CR593564|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9	CR598070|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr2_-_188127430_188127463	0.0134227	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg18_v1_chr15_+_38240555_38240713	0.0134076	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr10_+_123913094_123913348	0.0133773	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr5_-_132327090_132327128	0.0133755	SOX2.p2	BC063007|AFF4|27125|AF4/FMR2 family, member 4	BC025700|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr6_-_88911708_88911802	0.0133712	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg18_v1_chr16_+_1668291_1668324	0.013367	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr16_-_67977041_67977232	0.0133568	SOX2.p2	U95970|TERF2|7014|telomeric repeat binding factor 2
hg18_v1_chr19_-_41711009_41711087	0.0133286	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	CR609031|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg18_v1_chr15_+_38240501_38240542	0.0133097	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr2_+_27293846_27293921	0.0132988	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr8_-_72919241_72919284	0.0132963	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chr17_+_55052185_55052270	0.0132873	SOX2.p2	
hg18_v1_chr1_-_177378801_177378846	0.0132827	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr2_+_201644706_201645001	0.0132785	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg18_v1_chr11_-_128567302_128567302	0.0132754	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr1_-_27802688_27802729	0.0132429	SOX2.p2	NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1
hg18_v1_chr4_-_54625463_54625521	0.0132412	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr9_-_89939719_89939719	0.0131912	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg18_v1_chr4_+_113777568_113777568	0.0131875	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr10_-_61336242_61336419	0.0131864	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr5_+_109052945_109052982	0.0131726	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr11_-_85053807_85053874	0.0131259	SOX2.p2	BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor	NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor
hg18_v1_chr5_-_43638860_43639042	0.0131234	SOX2.p2	
hg18_v1_chr17_-_71611198_71611440	0.0130632	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg18_v1_chr13_+_51484517_51484561	0.013062	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chr5_-_134763464_134763480	0.0130558	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr5_+_95092384_95092865	0.0130187	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr2_-_85642061_85642144	0.0129742	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	CR607119|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr6_-_107542328_107542328	0.0129418	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg18_v1_chr1_-_151549790_151549817	0.0129384	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr10_+_17311307_17311331	0.0129284	SOX2.p2	CR599648|VIM|7431|vimentin	CR616791|VIM|7431|vimentin	CR618218|VIM|7431|vimentin	CR623356|VIM|7431|vimentin	CR607117|VIM|7431|vimentin	Z19554|VIM|7431|vimentin	CR596331|VIM|7431|vimentin	CR621990|VIM|7431|vimentin	CR617642|VIM|7431|vimentin	CR597703|VIM|7431|vimentin	CR620841|VIM|7431|vimentin	CR617507|VIM|7431|vimentin
hg18_v1_chrX_+_46938215_46938240	0.0129062	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg18_v1_chr6_+_25387744_25388002	0.0128914	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg18_v1_chr1_-_198645695_198645785	0.0128873	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr6_+_31838751_31838786	0.0128702	SOX2.p2	NM_001039651|C6orf26|401251|chromosome 6 open reading frame 26	BC137541|C6orf26|401251|chromosome 6 open reading frame 26	BC137542|C6orf26|401251|chromosome 6 open reading frame 26
hg18_v1_chr10_-_33663305_33663614	0.0128673	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	CR593940|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg18_v1_chr9_+_109086154_109086220	0.0128617	SOX2.p2	AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr16_+_1668284_1668290	0.0127843	SOX2.p2	BC060853|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr1_-_238842071_238842084	0.0127305	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg18_v1_chr1_+_50348052_50348199	0.0126939	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr3_+_173240126_173240131	0.0126285	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr1_-_244647333_244647336	0.0125774	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr20_-_1420168_1420232	0.0125724	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr7_+_50106227_50106227	0.0125628	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr2_+_101235695_101235779	0.0125042	SOX2.p2	CR611582|C2orf29|55571|chromosome 2 open reading frame 29	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr16_-_11918019_11918019	0.0124464	SOX2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr14_+_54238581_54238697	0.0124035	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr7_-_6832350_6832377	0.0123736	SOX2.p2	AK296026|C7orf28B|221960|chromosome 7 open reading frame 28B	AK000993|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr21_-_30781537_30781625	0.0123486	SOX2.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg18_v1_chr5_-_142764295_142764424	0.0123456	SOX2.p2	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr4_-_39655944_39656032	0.012292	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr16_+_1068781_1068869	0.0122286	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg18_v1_chr11_+_13646806_13646820	0.0121947	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr1_+_153445113_153445211	0.0121819	SOX2.p2	NM_002455|MTX1|4580|metaxin 1	NM_198883|MTX1|4580|metaxin 1	AK313863|MTX1|4580|metaxin 1	BC001906|MTX1|4580|metaxin 1
hg18_v1_chr17_+_22982383_22982414	0.0121766	SOX2.p2	CR598297|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR604285|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr7_-_93471463_93471638	0.012172	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR605582|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR601371|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg18_v1_chr9_+_124742932_124743167	0.0121547	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr22_-_39923412_39923459	0.0121544	SOX2.p2	
hg18_v1_chr2_+_136005423_136005638	0.0121282	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg18_v1_chr3_+_19963865_19963945	0.012122	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr19_+_40830964_40831050	0.0121061	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr8_+_133856793_133856855	0.012078	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr19_+_40831073_40831112	0.0120239	SOX2.p2	CR600969|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr16_-_30453646_30453736	0.0120181	SOX2.p2	AB209546|ZNF747|65988|zinc finger protein 747	AK054567|ZNF747|65988|zinc finger protein 747	BC001361|ZNF747|65988|zinc finger protein 747	NM_023931|ZNF747|65988|zinc finger protein 747
hg18_v1_chr1_+_61697209_61697352	0.0120175	SOX2.p2	AK096483|NFIA|4774|nuclear factor I/A
hg18_v1_chr1_-_52116894_52116948	0.0120089	SOX2.p2	AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr1_-_183392442_183392739	0.012005	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr18_+_647674_647748	0.0120043	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	CR608281|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	CR617715|TYMS|7298|thymidylate synthetase	CR607878|TYMS|7298|thymidylate synthetase	CR600251|TYMS|7298|thymidylate synthetase	CR607354|TYMS|7298|thymidylate synthetase	CR612332|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	CR617359|TYMS|7298|thymidylate synthetase	CR595729|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg18_v1_chr6_-_53321658_53321702	0.0119739	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr20_-_61039710_61039750	0.0119681	SOX2.p2	NM_022105|DIDO1|11083|death inducer-obliterator 1	NM_033081|DIDO1|11083|death inducer-obliterator 1	NM_080797|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr6_-_30692995_30693001	0.0119498	SOX2.p2	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr20_+_34667566_34667589	0.0119383	SOX2.p2	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr14_+_51397166_51397206	0.0119006	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_-_86276403_86276403	0.0118949	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr16_+_14835214_14835308	0.0118859	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1
hg18_v1_chr22_-_18484695_18484730	0.0118825	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR617494|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chrX_-_131181141_131181224	0.0118681	SOX2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr15_-_39481903_39481997	0.0118358	SOX2.p2	CR605439|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
hg18_v1_chr17_-_8139330_8139468	0.0118347	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr6_-_127706204_127706228	0.0118188	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr6_-_2787068_2787095	0.011806	SOX2.p2	CR626605|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	CR610741|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg18_v1_chr6_+_3204184_3204292	0.0118036	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr1_-_151910098_151910130	0.0117973	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chrX_+_100764757_100764838	0.0117946	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR616317|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR626124|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg18_v1_chr14_-_23106779_23106904	0.0117565	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	CR614596|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chrX_-_19727828_19727839	0.0117509	SOX2.p2	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr2_+_39746141_39746141	0.0117252	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr1_-_44912649_44912700	0.0116965	SOX2.p2	CR457348|TMEM53|79639|transmembrane protein 53	AK026006|TMEM53|79639|transmembrane protein 53	AK225405|TMEM53|79639|transmembrane protein 53	BC064520|TMEM53|79639|transmembrane protein 53	NM_024587|TMEM53|79639|transmembrane protein 53	CR592706|TMEM53|79639|transmembrane protein 53	CR608781|TMEM53|79639|transmembrane protein 53	AL832539|TMEM53|79639|transmembrane protein 53
hg18_v1_chr6_-_108386013_108386040	0.0116349	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr2_+_219354692_219354744	0.0116154	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr2_-_110230927_110230939	0.0116133	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr15_+_64372876_64373031	0.0116053	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr16_+_66464425_66464468	0.0115884	SOX2.p2	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr5_+_72287509_72287573	0.0115502	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg18_v1_chr21_-_33107813_33107922	0.0115318	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg18_v1_chr20_+_33506322_33506655	0.011507	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg18_v1_chr15_-_70385709_70385709	0.0115056	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr5_-_43349249_43349328	0.0114229	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr1_+_28717349_28717390	0.0114198	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr11_-_105398118_105398221	0.0114112	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr20_-_5539487_5539688	0.0114097	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg18_v1_chr2_-_3583793_3583799	0.0113942	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chr1_+_181075104_181075163	0.0113815	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr4_-_149582948_149583121	0.0113808	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr3_+_9748395_9748415	0.0113789	SOX2.p2	AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr4_-_40212670_40212760	0.01131	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg18_v1_chr10_-_113933457_113933534	0.0113007	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg18_v1_chr1_+_117404432_117404462	0.0112921	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr2_+_165804157_165804200	0.0112742	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr12_-_44644216_44644239	0.011269	SOX2.p2	
hg18_v1_chr8_+_22078622_22078810	0.0112628	SOX2.p2	AB209590|BMP1|649|bone morphogenetic protein 1	BC002593|BMP1|649|bone morphogenetic protein 1	BC009305|BMP1|649|bone morphogenetic protein 1	BC032105|BMP1|649|bone morphogenetic protein 1	BC044626|BMP1|649|bone morphogenetic protein 1	BC142953|BMP1|649|bone morphogenetic protein 1	AK291620|BMP1|649|bone morphogenetic protein 1	BC136679|BMP1|649|bone morphogenetic protein 1	BC144365|BMP1|649|bone morphogenetic protein 1	BC144366|BMP1|649|bone morphogenetic protein 1	BC101763|BMP1|649|bone morphogenetic protein 1	BC101765|BMP1|649|bone morphogenetic protein 1	BC143338|BMP1|649|bone morphogenetic protein 1
hg18_v1_chr5_+_52320660_52321094	0.0112622	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg18_v1_chr17_+_43480674_43480722	0.0111852	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr1_-_115060857_115060884	0.0111837	SOX2.p2	CR615916|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog	CR595772|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog	CR598435|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr8_-_125649926_125649958	0.0111582	SOX2.p2	AF116674|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr14_+_71065794_71065794	0.0111199	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr17_+_43328514_43328645	0.0111119	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg18_v1_chr5_-_43349338_43349369	0.0111088	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr1_-_27099515_27099522	0.0111072	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg18_v1_chrX_-_131989963_131989965	0.0110865	SOX2.p2	BC101189|USP26|83844|ubiquitin specific peptidase 26	BC101190|USP26|83844|ubiquitin specific peptidase 26	BC101191|USP26|83844|ubiquitin specific peptidase 26	BC101192|USP26|83844|ubiquitin specific peptidase 26	BC069073|USP26|83844|ubiquitin specific peptidase 26	AF285593|USP26|83844|ubiquitin specific peptidase 26	NM_031907|USP26|83844|ubiquitin specific peptidase 26
hg18_v1_chr1_+_112740380_112740403	0.0110476	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr5_-_39461054_39461095	0.0110288	SOX2.p2	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr2_+_190357354_190357536	0.0110241	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr1_-_150862202_150862202	0.0109981	SOX2.p2	AB528786|LCE3A|353142|late cornified envelope 3A	BC120933|LCE3A|353142|late cornified envelope 3A	BC120934|LCE3A|353142|late cornified envelope 3A	NM_178431|LCE3A|353142|late cornified envelope 3A
hg18_v1_chr13_-_48916144_48916221	0.0109797	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg18_v1_chr2_-_218865451_218865547	0.0109773	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	CR603628|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg18_v1_chr7_-_108311872_108311872	0.0109704	SOX2.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr2_-_3583724_3583784	0.0109646	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg18_v1_chr1_+_218334041_218334110	0.0109551	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_-_152422270_152422281	0.0109046	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	CR597930|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg18_v1_chr20_+_25336328_25336372	0.0108991	SOX2.p2	D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr3_+_9748439_9748461	0.0108636	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr12_-_11178109_11178109	0.0108553	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg18_v1_chr1_-_245237952_245237957	0.0108429	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr1_-_199657468_199657496	0.0108269	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr1_+_112740378_112740378	0.0108131	SOX2.p2	
hg18_v1_chr3_+_48388712_48388768	0.0107952	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg18_v1_chr6_-_151754337_151754470	0.0107904	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg18_v1_chr2_+_198089036_198089082	0.0107746	SOX2.p2	AF093825|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF151853|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK307497|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AL080070|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AB015441|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK297514|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AJ580638|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	CR457371|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr1_+_28935719_28936022	0.0107275	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr17_-_3129017_3129017	0.0106706	SOX2.p2	BC095517|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2	NM_002551|OR3A2|4995|olfactory receptor, family 3, subfamily A, member 2
hg18_v1_chr17_-_45427565_45427589	0.0106667	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg18_v1_chr1_+_47674275_47674275	0.0106544	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg18_v1_chr4_-_103484841_103484942	0.0106446	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr1_-_152422261_152422264	0.010627	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3	CR589996|TPM3|7170|tropomyosin 3
hg18_v1_chr7_+_147667461_147667536	0.0106003	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2	CR613191|CNTNAP2|26047|contactin associated protein-like 2
hg18_v1_chr17_+_22982344_22982367	0.0105939	SOX2.p2	AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR602208|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr3_+_170974745_170974983	0.0105826	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg18_v1_chr15_+_63609895_63610058	0.0105792	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr15_+_54998264_54998321	0.0105586	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg18_v1_chr21_+_16024241_16024583	0.0105464	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr9_+_101717278_101717284	0.0105384	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg18_v1_chr1_+_159334774_159334815	0.0104638	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg18_v1_chr17_-_4216359_4216561	0.0104574	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR622319|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr10_+_17311242_17311281	0.0104568	SOX2.p2	CR593122|VIM|7431|vimentin	CR593139|VIM|7431|vimentin	CR593157|VIM|7431|vimentin	CR595631|VIM|7431|vimentin	CR596714|VIM|7431|vimentin	CR597938|VIM|7431|vimentin	CR599707|VIM|7431|vimentin	CR601844|VIM|7431|vimentin	CR602002|VIM|7431|vimentin	CR602499|VIM|7431|vimentin	CR602711|VIM|7431|vimentin	CR604958|VIM|7431|vimentin	CR605908|VIM|7431|vimentin	CR608479|VIM|7431|vimentin	CR610054|VIM|7431|vimentin	CR611833|VIM|7431|vimentin	CR615569|VIM|7431|vimentin	CR617011|VIM|7431|vimentin	CR617845|VIM|7431|vimentin	CR618852|VIM|7431|vimentin	CR620637|VIM|7431|vimentin	CR620780|VIM|7431|vimentin	CR621379|VIM|7431|vimentin	CR624853|VIM|7431|vimentin	CR593764|VIM|7431|vimentin	CR595804|VIM|7431|vimentin	CR604328|VIM|7431|vimentin	CR604633|VIM|7431|vimentin	CR609435|VIM|7431|vimentin
hg18_v1_chr12_-_55758814_55758818	0.0104196	SOX2.p2	AL833310|TMEM194A|23306|transmembrane protein 194A	AL833311|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr19_+_54872304_54872363	0.0104166	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	CR595920|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1	CR594562|PRMT1|3276|protein arginine methyltransferase 1	CR615809|PRMT1|3276|protein arginine methyltransferase 1	CR618569|PRMT1|3276|protein arginine methyltransferase 1	CR614514|PRMT1|3276|protein arginine methyltransferase 1	CR625308|PRMT1|3276|protein arginine methyltransferase 1	CR593945|PRMT1|3276|protein arginine methyltransferase 1	CR606998|PRMT1|3276|protein arginine methyltransferase 1	CR593955|PRMT1|3276|protein arginine methyltransferase 1	CR608047|PRMT1|3276|protein arginine methyltransferase 1	CR607814|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	CR597161|PRMT1|3276|protein arginine methyltransferase 1	CR597475|PRMT1|3276|protein arginine methyltransferase 1	CR620963|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr3_+_180348818_180349046	0.0103923	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg18_v1_chr16_-_1772577_1772609	0.0103862	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr12_+_120055013_120055156	0.0103794	SOX2.p2	NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7
hg18_v1_chr2_+_207115060_207115102	0.0103136	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr4_-_39205316_39205489	0.0103064	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr6_+_26264531_26264536	0.0103001	SOX2.p2	AK313681|HIST1H1E|3008|histone cluster 1, H1e
hg18_v1_chr22_+_28609201_28609321	0.0102689	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr8_+_64243662_64243735	0.0102578	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr13_-_27092538_27092670	0.0102487	SOX2.p2	BC036755|LNX2|222484|ligand of numb-protein X 2
hg18_v1_chr3_+_130641639_130641761	0.0102447	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr8_-_95634845_95634921	0.0102445	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429
hg18_v1_chr10_-_17211795_17211884	0.0102437	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg18_v1_chr1_-_229071957_229071957	0.0102338	SOX2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr20_-_32728517_32728593	0.0102256	SOX2.p2	CR610914|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr14_+_104851948_104852223	0.0102138	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_001100913|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_015197|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg18_v1_chr9_+_89302239_89302573	0.0101578	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr3_-_130641470_130641506	0.0101558	SOX2.p2	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr3_-_170347019_170347093	0.0101556	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr19_-_9087438_9087438	0.0101464	SOX2.p2	NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1
hg18_v1_chr6_-_47361921_47361962	0.010109	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr9_-_16717887_16717908	0.0100884	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg18_v1_chr4_+_175441402_175441469	0.0100645	SOX2.p2	NM_001040157|KIAA1712|80817|KIAA1712
hg18_v1_chr2_-_70166903_70166922	0.0100116	SOX2.p2	AK056822|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr9_+_131637549_131637623	0.0099877	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chrX_-_133758812_133758927	0.00996589	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr14_+_49430109_49430204	0.0099641	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr16_-_21571463_21571492	0.00995665	SOX2.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg18_v1_chr1_-_17637576_17637619	0.00995486	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr7_+_2565137_2565170	0.00995033	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg18_v1_chr12_-_10953427_10953427	0.00993633	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr11_-_62231636_62231775	0.0099108	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr6_-_53034445_53034538	0.00988725	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr20_+_29565974_29566124	0.00983641	SOX2.p2	AJ420895|HM13|81502|histocompatibility (minor) 13	DQ896206|HM13|81502|histocompatibility (minor) 13	AF515663|HM13|81502|histocompatibility (minor) 13	CR601811|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr3_-_157755603_157755671	0.00980994	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr19_-_18409788_18409965	0.00979909	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	CR600268|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	CR599696|ISYNA1|51477|inositol-3-phosphate synthase 1	CR606341|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg18_v1_chr5_+_137716285_137716383	0.00977949	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr12_+_119617060_119617142	0.00977647	SOX2.p2	
hg18_v1_chr16_+_71256497_71256633	0.0097618	SOX2.p2	
hg18_v1_chr1_-_159369081_159369101	0.00975484	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr15_-_75364387_75364387	0.00975352	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr8_+_133856738_133856792	0.00971675	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr16_+_31098931_31098958	0.00970691	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma	CR591758|FUS|2521|fused in sarcoma
hg18_v1_chr2_+_206732859_206732948	0.0097012	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR612393|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR596342|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR605644|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR626685|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg18_v1_chr10_-_91451102_91451192	0.00966811	SOX2.p2	AK097726|NBAS|51594|neuroblastoma amplified sequence
hg18_v1_chr2_-_198007984_198008008	0.00966771	SOX2.p2	BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr1_-_159435440_159435470	0.00964996	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg18_v1_chr1_-_154987708_154987898	0.00964383	SOX2.p2	AK292325|HDGF|3068|hepatoma-derived growth factor	DQ893406|HDGF|3068|hepatoma-derived growth factor	DQ896724|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr3_+_185520744_185520900	0.00961887	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr10_+_85889164_85889311	0.00954824	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	CR613304|GHITM|27069|growth hormone inducible transmembrane protein	CR618105|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein	CR607970|GHITM|27069|growth hormone inducible transmembrane protein
hg18_v1_chr14_+_22375753_22375866	0.00954519	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr5_+_138116972_138117015	0.00949996	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr9_+_5500544_5500783	0.00949803	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr10_-_44775142_44775164	0.00949723	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr2_+_160277273_160277300	0.00949312	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr14_-_49767840_49767861	0.00949182	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr7_-_155297576_155297727	0.00948744	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg18_v1_chr17_-_40380553_40380624	0.00943163	SOX2.p2	NM_001080443|KIF18B|146909|kinesin family member 18B
hg18_v1_chr10_+_7785290_7785326	0.00942084	SOX2.p2	AK291379|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr3_-_45242624_45242801	0.00938969	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR593631|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR615050|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR591255|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR621614|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr3_-_130641539_130641584	0.00937001	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr12_-_121551424_121551519	0.00935021	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr22_-_48607199_48607341	0.00934638	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg18_v1_chr1_+_92268072_92268224	0.00934521	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg18_v1_chr20_-_30795035_30795057	0.00933903	SOX2.p2	BC047440|COMMD7|149951|COMM domain containing 7
hg18_v1_chr19_-_19487237_19487493	0.00930635	SOX2.p2	DQ891603|TSSK6|83983|testis-specific serine kinase 6	DQ894797|TSSK6|83983|testis-specific serine kinase 6	AF329483|TSSK6|83983|testis-specific serine kinase 6	AK058166|TSSK6|83983|testis-specific serine kinase 6	AK313767|TSSK6|83983|testis-specific serine kinase 6	BC014611|TSSK6|83983|testis-specific serine kinase 6	NM_032037|TSSK6|83983|testis-specific serine kinase 6	AF348077|TSSK6|83983|testis-specific serine kinase 6
hg18_v1_chr19_+_977627_977697	0.00930297	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	CR598250|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	CR611249|CNN2|1265|calponin 2	CR615042|CNN2|1265|calponin 2	CR618608|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	CR592852|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	CR606476|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg18_v1_chr11_-_56951132_56951159	0.00929329	SOX2.p2	BC003163|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr3_-_115826481_115826488	0.00924789	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr19_+_4294523_4294707	0.00919881	SOX2.p2	NM_001159846|MPND|84954|MPN domain containing	NM_032868|MPND|84954|MPN domain containing	AK027887|MPND|84954|MPN domain containing	CR600604|MPND|84954|MPN domain containing	CR605933|MPND|84954|MPN domain containing	AK308468|MPND|84954|MPN domain containing	BC032652|MPND|84954|MPN domain containing	CR613172|MPND|84954|MPN domain containing	CR610197|MPND|84954|MPN domain containing	CR618730|MPND|84954|MPN domain containing
hg18_v1_chr1_-_41399632_41399690	0.0091731	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr5_+_121675672_121675842	0.00916775	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr5_-_150118747_150118849	0.00914071	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg18_v1_chr12_+_67489063_67489073	0.00913869	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr6_-_53321706_53321901	0.00913779	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr3_+_9748769_9748804	0.00910184	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr11_+_65096395_65096620	0.00909469	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B	CR612503|FAM89B|23625|family with sequence similarity 89, member B	CR616644|FAM89B|23625|family with sequence similarity 89, member B	CR615607|FAM89B|23625|family with sequence similarity 89, member B	CR610230|FAM89B|23625|family with sequence similarity 89, member B
hg18_v1_chr1_+_112740322_112740376	0.00906811	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr22_-_16636748_16636812	0.00903379	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg18_v1_chrX_-_53465847_53465890	0.00898528	SOX2.p2	BX640922|SMC1A|8243|structural maintenance of chromosomes 1A
hg18_v1_chr15_+_55298908_55299010	0.0089717	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr11_+_129484540_129484559	0.00894465	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr8_+_133948384_133948427	0.00893824	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg18_v1_chr2_+_160277219_160277263	0.00887823	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr2_-_170389598_170389665	0.00879177	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	CR616340|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg18_v1_chr19_-_55046718_55046780	0.0087852	SOX2.p2	BC043359|LOC100506033|100506033|hypothetical LOC100506033
hg18_v1_chr1_+_224064365_224064425	0.00876933	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr4_+_38341982_38342461	0.00871871	SOX2.p2	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr1_-_245561613_245561667	0.00870359	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr3_-_130641460_130641469	0.00870174	SOX2.p2	CR619777|MBD4|8930|methyl-CpG binding domain protein 4	AK312878|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr11_-_64646157_64646247	0.00868566	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg18_v1_chr3_-_156904690_156904690	0.00865125	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg18_v1_chr8_-_103735194_103735343	0.00864359	SOX2.p2	BC011538|KLF10|7071|Kruppel-like factor 10	NM_001032282|KLF10|7071|Kruppel-like factor 10	S81439|KLF10|7071|Kruppel-like factor 10
hg18_v1_chr14_-_105657378_105657714	0.00861444	SOX2.p2	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg18_v1_chr18_+_70134089_70134089	0.0085964	SOX2.p2	CR749350|DKFZP781G0119|644041|hypothetical protein LOC644041	NM_001174123|DKFZP781G0119|644041|hypothetical protein LOC644041
hg18_v1_chr13_-_47775797_47775823	0.00859307	SOX2.p2	
hg18_v1_chr1_-_151910080_151910095	0.00858401	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chrX_-_119487164_119487182	0.00858369	SOX2.p2	CR606114|LAMP2|3920|lysosomal-associated membrane protein 2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr7_-_99612757_99612970	0.00857828	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr1_-_152422260_152422260	0.00856606	SOX2.p2	BC000771|TPM3|7170|tropomyosin 3
hg18_v1_chr6_+_97117144_97117237	0.00854931	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr7_+_55947824_55947861	0.00853945	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr17_-_33043514_33043613	0.00853558	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr2_+_114363919_114364115	0.00853062	SOX2.p2	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr7_+_77307382_77307508	0.00849369	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr7_+_16533029_16533029	0.00844585	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr19_-_1062972_1063003	0.00843213	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg18_v1_chr11_+_82460766_82460767	0.00839655	SOX2.p2	BC031316|LOC100506233|100506233|hypothetical LOC100506233
hg18_v1_chr2_-_39517795_39517815	0.00838912	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr7_-_148211533_148211559	0.00837429	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr5_+_96023627_96023742	0.00836149	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg18_v1_chr9_-_37455384_37455406	0.00835264	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr1_-_202432165_202432250	0.0083165	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr11_+_55554470_55554470	0.00829946	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr19_+_18124998_18125066	0.00827985	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg18_v1_chr11_+_64646275_64646377	0.00825158	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	CR600382|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49	CR625371|MRPL49|740|mitochondrial ribosomal protein L49
hg18_v1_chr20_-_32728749_32728749	0.00824186	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr3_+_130641765_130641777	0.0082347	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr3_-_185085352_185085361	0.00822465	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr7_-_26206891_26206943	0.00822258	SOX2.p2	BX537494|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_002137|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_031243|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr2_+_95432150_95432262	0.00821302	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	CR623858|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg18_v1_chr12_+_54498129_54498146	0.00819156	SOX2.p2	AK223180|ORMDL2|29095|ORM1-like 2 (S. cerevisiae)
hg18_v1_chr6_+_15357013_15357171	0.00818456	SOX2.p2	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr1_-_27099524_27099552	0.0081782	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	CR619450|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr6_-_166960690_166960726	0.00814557	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr10_-_90702490_90702559	0.00813462	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR619420|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR597033|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR621459|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr12_-_121551349_121551411	0.00807244	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr20_+_33667160_33667339	0.00806155	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg18_v1_chr13_+_52500830_52500996	0.00805705	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr8_+_38877909_38878027	0.00803978	SOX2.p2	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg18_v1_chrX_-_154495686_154495815	0.00802903	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr2_-_127694123_127694251	0.00802135	SOX2.p2	AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1
hg18_v1_chr1_+_36520751_36520823	0.00801176	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr8_+_86563382_86563562	0.00799444	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	CR613409|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	CR603817|CA2|760|carbonic anhydrase II	CR608877|CA2|760|carbonic anhydrase II	CR602161|CA2|760|carbonic anhydrase II	CR590312|CA2|760|carbonic anhydrase II	CR591919|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg18_v1_chr6_+_18263514_18263755	0.00799293	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chrX_+_48219344_48219638	0.00798839	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595767|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595180|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR600255|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616099|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR590233|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR613129|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616867|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR606907|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR609653|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg18_v1_chr2_-_38683477_38683516	0.00792152	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr5_-_40871082_40871143	0.00791911	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg18_v1_chr6_-_127706141_127706196	0.00784172	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr6_-_100123238_100123410	0.00780073	SOX2.p2	BC010135|CCNC|892|cyclin C	CR595249|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg18_v1_chr1_-_151910041_151910051	0.00778356	SOX2.p2	CR606686|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR624512|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR590641|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR590138|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR620610|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr3_+_10043139_10043182	0.00777575	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr19_+_54299686_54299780	0.0077584	SOX2.p2	CR613069|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)
hg18_v1_chr14_+_66725862_66725930	0.00775435	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg18_v1_chr6_+_17390273_17390273	0.00774959	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr1_-_159369041_159369061	0.007683	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr2_-_225519974_225520022	0.0076816	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr4_-_83514160_83514195	0.00767618	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg18_v1_chr2_-_110230642_110230746	0.00755133	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr9_+_116389814_116389911	0.00751154	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR617444|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR607789|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg18_v1_chr3_-_87122936_87122946	0.00749297	SOX2.p2	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr16_+_1668257_1668282	0.0074688	SOX2.p2	AK309909|HN1L|90861|hematological and neurological expressed 1-like	AK296998|HN1L|90861|hematological and neurological expressed 1-like	NM_144570|HN1L|90861|hematological and neurological expressed 1-like	AK023154|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr6_-_42821815_42821892	0.00746354	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr5_-_132326872_132326960	0.00746066	SOX2.p2	AF213987|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr6_-_31882704_31882744	0.00745589	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	CR601536|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg18_v1_chr20_+_2792688_2792879	0.0074419	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg18_v1_chr1_+_61315516_61315533	0.00742563	SOX2.p2	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr4_+_142361523_142361550	0.00741514	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg18_v1_chr20_-_45360903_45361050	0.00739749	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chrX_-_48743561_48743624	0.00739288	SOX2.p2	AB032993|GRIPAP1|56850|GRIP1 associated protein 1	AK292158|GRIPAP1|56850|GRIP1 associated protein 1	BC101544|GRIPAP1|56850|GRIP1 associated protein 1	BC101546|GRIPAP1|56850|GRIP1 associated protein 1	BX647801|GRIPAP1|56850|GRIP1 associated protein 1	BX647804|GRIPAP1|56850|GRIP1 associated protein 1	NM_020137|GRIPAP1|56850|GRIP1 associated protein 1	NM_207672|GRIPAP1|56850|GRIP1 associated protein 1
hg18_v1_chr20_-_23755297_23755367	0.00735748	SOX2.p2	NM_001322|CST2|1470|cystatin SA	BC062679|CST2|1470|cystatin SA
hg18_v1_chr9_+_116943917_116943917	0.00733241	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg18_v1_chr10_-_27483144_27483283	0.00731793	SOX2.p2	CR611030|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr7_+_2565172_2565191	0.00731631	SOX2.p2	AK302053|IQCE|23288|IQ motif containing E
hg18_v1_chr3_-_116272911_116272950	0.00731064	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr12_-_9976173_9976246	0.00730627	SOX2.p2	EU095393|CLEC2A|387836|C-type lectin domain family 2, member A	EU095394|CLEC2A|387836|C-type lectin domain family 2, member A	AY359126|CLEC2A|387836|C-type lectin domain family 2, member A	EF127467|CLEC2A|387836|C-type lectin domain family 2, member A	NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A
hg18_v1_chr8_+_23442307_23442323	0.00728705	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr12_+_92487728_92487728	0.00728061	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg18_v1_chr2_-_85642155_85642177	0.00727166	SOX2.p2	NM_000821|GGCX|2677|gamma-glutamyl carboxylase	NM_001142269|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr12_+_99712504_99712866	0.0072663	SOX2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg18_v1_chr15_+_54998181_54998207	0.0072558	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg18_v1_chr19_+_977608_977612	0.00725306	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg18_v1_chr6_-_31736488_31736545	0.00722302	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg18_v1_chrX_+_109548940_109548940	0.00721639	SOX2.p2	AB037739|RGAG1|57529|retrotransposon gag domain containing 1	AY121804|RGAG1|57529|retrotransposon gag domain containing 1	NM_020769|RGAG1|57529|retrotransposon gag domain containing 1
hg18_v1_chr22_+_40724674_40724768	0.00719207	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg18_v1_chr16_-_57309625_57309654	0.00718364	SOX2.p2	CR612588|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)
hg18_v1_chr1_+_32600384_32600448	0.00718084	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg18_v1_chr6_-_43089528_43089605	0.00714592	SOX2.p2	BT009831|MEA1|4201|male-enhanced antigen 1	L10400|MEA1|4201|male-enhanced antigen 1	M27937|MEA1|4201|male-enhanced antigen 1	BC001754|MEA1|4201|male-enhanced antigen 1	NM_014623|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr7_+_150319076_150319124	0.00713576	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr5_-_172976212_172976257	0.0071322	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr19_+_46462113_46462121	0.00711755	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr9_+_102380156_102380264	0.00711366	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg18_v1_chr10_+_104603956_104604026	0.00710468	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr1_+_36046373_36046442	0.00707314	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr1_-_171286634_171286725	0.00706769	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg18_v1_chr7_-_122313646_122313822	0.0070359	SOX2.p2	AY264289|CADPS2|93664|Ca++-dependent secretion activator 2	AF401638|CADPS2|93664|Ca++-dependent secretion activator 2	BC054339|CADPS2|93664|Ca++-dependent secretion activator 2	BC136601|CADPS2|93664|Ca++-dependent secretion activator 2	BC144278|CADPS2|93664|Ca++-dependent secretion activator 2	BC144279|CADPS2|93664|Ca++-dependent secretion activator 2	AK126518|CADPS2|93664|Ca++-dependent secretion activator 2
hg18_v1_chr12_-_98072602_98072806	0.00703565	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	CR602042|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr5_+_121675284_121675339	0.00701328	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr9_-_4289574_4289593	0.00700965	SOX2.p2	DQ438882|GLIS3|169792|GLIS family zinc finger 3	DQ438887|GLIS3|169792|GLIS family zinc finger 3	DQ438892|GLIS3|169792|GLIS family zinc finger 3	DQ438899|GLIS3|169792|GLIS family zinc finger 3	DQ438902|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr19_-_12853249_12853334	0.00700446	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	CR605842|DNASE2|1777|deoxyribonuclease II, lysosomal	CR608424|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	CR617284|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chr11_+_128067598_128067598	0.00700349	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr10_+_17311283_17311303	0.00691772	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	CR614482|VIM|7431|vimentin	CR622549|VIM|7431|vimentin	CR612980|VIM|7431|vimentin	CR590855|VIM|7431|vimentin	CR600582|VIM|7431|vimentin	CR600607|VIM|7431|vimentin	CR621958|VIM|7431|vimentin	CR622001|VIM|7431|vimentin	CR623317|VIM|7431|vimentin	CR591166|VIM|7431|vimentin	CR596422|VIM|7431|vimentin	CR601396|VIM|7431|vimentin	CR606048|VIM|7431|vimentin	CR608699|VIM|7431|vimentin	CR619643|VIM|7431|vimentin	CR622265|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	CR598442|VIM|7431|vimentin	CR620869|VIM|7431|vimentin	CR616523|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg18_v1_chr1_+_170768914_170769094	0.00687523	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr22_+_18485076_18485093	0.00687024	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg18_v1_chr12_-_46439127_46439155	0.0068669	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr18_+_41558089_41558115	0.00684366	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr20_+_31268779_31268818	0.00684242	SOX2.p2	BC041904|C20orf71|128861|chromosome 20 open reading frame 71	NM_001042439|C20orf71|128861|chromosome 20 open reading frame 71	NM_178466|C20orf71|128861|chromosome 20 open reading frame 71	BC066354|C20orf71|128861|chromosome 20 open reading frame 71
hg18_v1_chr15_-_63185631_63185749	0.00679297	SOX2.p2	BC127916|LOC390595|390595|ubiquitin-associated protein 1-like	NM_001163692|LOC390595|390595|ubiquitin-associated protein 1-like
hg18_v1_chr1_-_43196911_43197107	0.0067568	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr17_-_77422463_77422524	0.00674901	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR597273|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR609352|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR597482|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR599297|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR609835|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR612591|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR617872|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR620401|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR604600|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR624605|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR606983|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr9_+_70840298_70840298	0.00672376	SOX2.p2	NM_000144|FXN|2395|frataxin	NM_001161706|FXN|2395|frataxin	NM_181425|FXN|2395|frataxin
hg18_v1_chr9_-_35818728_35818743	0.00671256	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg18_v1_chr10_+_7785360_7785406	0.00670415	SOX2.p2	AK225277|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr1_-_115070413_115070531	0.00669752	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr8_-_124818754_124818846	0.00669151	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg18_v1_chr5_+_109052984_109053008	0.00663813	SOX2.p2	
hg18_v1_chr19_+_57464659_57464678	0.00662866	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr1_+_156716290_156716291	0.00662255	SOX2.p2	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2
hg18_v1_chr5_+_150380325_150380407	0.00660571	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591707|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	CR613980|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615361|GPX3|2878|glutathione peroxidase 3 (plasma)	CR590594|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599318|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601235|GPX3|2878|glutathione peroxidase 3 (plasma)	CR606740|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591081|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591549|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594135|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594536|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597434|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597736|GPX3|2878|glutathione peroxidase 3 (plasma)	CR603874|GPX3|2878|glutathione peroxidase 3 (plasma)	CR605862|GPX3|2878|glutathione peroxidase 3 (plasma)	CR609961|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612224|GPX3|2878|glutathione peroxidase 3 (plasma)	CR614185|GPX3|2878|glutathione peroxidase 3 (plasma)	CR617790|GPX3|2878|glutathione peroxidase 3 (plasma)	CR618599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR619761|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621477|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623606|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623985|GPX3|2878|glutathione peroxidase 3 (plasma)	CR624695|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598624|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601731|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621207|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615321|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591367|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598855|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599527|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623984|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623260|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612204|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg18_v1_chr17_+_63338500_63338579	0.00659274	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr10_+_7785235_7785288	0.0065902	SOX2.p2	NM_002216|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr7_+_99537065_99537424	0.00658547	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR590642|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR611943|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR621800|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR595500|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR625474|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg18_v1_chr17_-_37422926_37422972	0.00657155	SOX2.p2	AB209834|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ893064|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ896317|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK291047|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC003601|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	U46571|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AM393511|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC011837|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK296602|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK316081|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg18_v1_chr5_+_133889584_133889825	0.00656945	SOX2.p2	D87076|PHF15|23338|PHD finger protein 15	NM_015288|PHF15|23338|PHD finger protein 15	AK290471|PHF15|23338|PHD finger protein 15
hg18_v1_chr1_-_29348252_29348308	0.00653543	SOX2.p2	CR594929|SRSF4|6429|serine/arginine-rich splicing factor 4
hg18_v1_chr19_+_46507872_46507976	0.00652079	SOX2.p2	BC011577|CCDC97|90324|coiled-coil domain containing 97	NM_052848|CCDC97|90324|coiled-coil domain containing 97
hg18_v1_chrX_-_130250880_130251007	0.00648088	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	CR614008|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr10_+_18988282_18988572	0.00647416	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg18_v1_chrX_-_13744933_13745092	0.00646563	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg18_v1_chr7_-_120285364_120285428	0.00643533	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr13_+_47775888_47775897	0.00642147	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chr5_+_138117017_138117044	0.00640095	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr16_-_74024750_74024903	0.00638814	SOX2.p2	BT009819|CFDP1|10428|craniofacial development protein 1	CR542111|CFDP1|10428|craniofacial development protein 1	DQ890998|CFDP1|10428|craniofacial development protein 1	EU176574|CFDP1|10428|craniofacial development protein 1	AK313948|CFDP1|10428|craniofacial development protein 1	CR622718|CFDP1|10428|craniofacial development protein 1	CR626586|CFDP1|10428|craniofacial development protein 1	AB009285|CFDP1|10428|craniofacial development protein 1	D85939|CFDP1|10428|craniofacial development protein 1	CR623318|CFDP1|10428|craniofacial development protein 1	BC000991|CFDP1|10428|craniofacial development protein 1	NM_006324|CFDP1|10428|craniofacial development protein 1	AK226031|CFDP1|10428|craniofacial development protein 1
hg18_v1_chr3_+_130641840_130641865	0.00638244	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	CR614053|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr1_+_64012154_64012341	0.00637697	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg18_v1_chr22_-_16020153_16020167	0.00636542	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR601915|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR606299|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr10_-_75080784_75080805	0.00635161	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg18_v1_chr12_-_44949474_44949474	0.00632541	SOX2.p2	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1	NM_030674|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr12_-_11030777_11030777	0.00631878	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr15_-_38420414_38420459	0.00629388	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg18_v1_chr12_-_106679038_106679043	0.00628112	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg18_v1_chrX_-_100015783_100016006	0.00627305	SOX2.p2	AJ438989|NOX1|27035|NADPH oxidase 1	DQ424904|NOX1|27035|NADPH oxidase 1	BC075014|NOX1|27035|NADPH oxidase 1	BC075015|NOX1|27035|NADPH oxidase 1	AF166326|NOX1|27035|NADPH oxidase 1	AF166327|NOX1|27035|NADPH oxidase 1	AF166328|NOX1|27035|NADPH oxidase 1	AK313678|NOX1|27035|NADPH oxidase 1	AK292201|NOX1|27035|NADPH oxidase 1	AF127763|NOX1|27035|NADPH oxidase 1	NM_007052|NOX1|27035|NADPH oxidase 1	NM_013955|NOX1|27035|NADPH oxidase 1
hg18_v1_chr6_-_52549774_52549847	0.00625794	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr1_+_112099703_112099781	0.00625196	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr19_+_13090101_13090150	0.00624866	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr11_-_2970153_2970198	0.00624696	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr7_+_73709943_73709972	0.00624415	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg18_v1_chr19_-_4293718_4293782	0.00622596	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg18_v1_chr1_-_172059780_172059949	0.00622561	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr12_+_100795213_100795286	0.00621896	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr2_-_3583801_3583833	0.00619832	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	CR596638|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1	CR594242|RNASEH1|246243|ribonuclease H1
hg18_v1_chr1_+_111215343_111215361	0.00617671	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr1_-_149586298_149586326	0.00617334	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg18_v1_chr12_+_103375116_103375318	0.00616709	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg18_v1_chr13_+_33290205_33290250	0.0061668	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr7_+_100047877_100048139	0.00616088	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3	CR608430|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr1_+_42920889_42920944	0.00614681	SOX2.p2	CR617953|YBX1|4904|Y box binding protein 1
hg18_v1_chr6_+_71333327_71333366	0.00613936	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chr13_+_47775776_47775886	0.00612094	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr20_+_56989690_56989714	0.0061181	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	CR616677|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr11_+_71221893_71221893	0.0061152	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr12_+_49185011_49185034	0.00611161	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr4_-_76868581_76868818	0.00608738	SOX2.p2	
hg18_v1_chr11_-_60886038_60886415	0.00606494	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chrX_-_119487183_119487261	0.00603854	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr5_+_137716169_137716190	0.00602899	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr2_+_185171537_185171564	0.00601975	SOX2.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr3_+_116824840_116825226	0.00599838	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43	CR607941|GAP43|2596|growth associated protein 43	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	CR623492|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	CR614045|GAP43|2596|growth associated protein 43	CR612258|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg18_v1_chr4_+_142361494_142361516	0.00599143	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg18_v1_chr22_-_16637221_16637225	0.00598835	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg18_v1_chr6_-_42821800_42821813	0.00597037	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	CR594940|TBCC|6903|tubulin folding cofactor C	CR609978|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr6_-_42821790_42821799	0.00596091	SOX2.p2	CR591267|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr4_+_83570980_83571006	0.00593988	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr19_+_2928480_2928652	0.00590437	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	CR607853|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg18_v1_chr4_+_123967265_123967323	0.00589903	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr3_+_88270951_88270951	0.00587857	SOX2.p2	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr11_-_101828563_101829084	0.00587574	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr12_+_115833093_115833245	0.005875	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg18_v1_chr2_-_242205556_242205588	0.00585463	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr17_+_1566566_1566644	0.0058529	SOX2.p2	AK298567|WDR81|124997|WD repeat domain 81	NM_001163673|WDR81|124997|WD repeat domain 81	NM_152348|WDR81|124997|WD repeat domain 81	AK091136|WDR81|124997|WD repeat domain 81	BC114519|WDR81|124997|WD repeat domain 81	BC114568|WDR81|124997|WD repeat domain 81
hg18_v1_chr5_-_134762695_134762732	0.00582247	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr6_-_76010231_76010363	0.00581216	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr4_+_120167770_120167775	0.00580961	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr2_-_190357241_190357317	0.00579769	SOX2.p2	CR620006|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr6_-_27988152_27988152	0.00578609	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chr16_-_30993004_30993141	0.0057769	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg18_v1_chr5_-_10814179_10814340	0.00577233	SOX2.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chr5_+_140790365_140790389	0.0057705	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr6_-_33276131_33276134	0.00574377	SOX2.p2	CR618812|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr5_-_172976259_172976299	0.00572109	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr17_+_25730048_25730083	0.00571555	SOX2.p2	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg18_v1_chrX_-_74659982_74660000	0.00569145	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr9_+_35819375_35819581	0.00568493	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr12_-_15005761_15005869	0.00564329	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr16_+_65196133_65196152	0.00564041	SOX2.p2	CR598427|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR615620|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR619122|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR618108|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr14_+_19993545_19993644	0.00562072	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr1_+_44451698_44451762	0.00561718	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg18_v1_chr17_+_25730086_25730098	0.00560859	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg18_v1_chr3_+_157875063_157875129	0.00560756	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr6_+_52393763_52393763	0.00560744	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg18_v1_chr2_-_162808123_162808290	0.00559171	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chr3_+_30623376_30623439	0.00558587	SOX2.p2	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr6_-_47385470_47385598	0.00557643	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr10_+_28862429_28862444	0.00557124	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr2_+_231629806_231629836	0.00556713	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr15_-_86890796_86890915	0.00555001	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg18_v1_chr22_-_16637160_16637189	0.00551788	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg18_v1_chr15_-_38118608_38118680	0.00551292	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chrX_-_49008115_49008231	0.00550787	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg18_v1_chr19_+_977601_977605	0.00550723	SOX2.p2	CR592088|CNN2|1265|calponin 2	CR602855|CNN2|1265|calponin 2	CR607371|CNN2|1265|calponin 2
hg18_v1_chr17_-_59172852_59172895	0.00546151	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	CR601658|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg18_v1_chr16_-_78192111_78192122	0.0054511	SOX2.p2	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
hg18_v1_chr10_+_35575958_35575958	0.00545008	SOX2.p2	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg18_v1_chr12_-_30740072_30740195	0.00542309	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr6_-_52549673_52549761	0.00539629	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr5_+_156625629_156626032	0.00537354	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	CR596909|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr12_+_105275565_105275636	0.00536294	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg18_v1_chr4_+_1693031_1693101	0.00535359	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg18_v1_chr2_-_228206045_228206279	0.00534678	SOX2.p2	AM393148|C2orf83|56918|chromosome 2 open reading frame 83	AM393273|C2orf83|56918|chromosome 2 open reading frame 83	BC131618|C2orf83|56918|chromosome 2 open reading frame 83	AL359944|C2orf83|56918|chromosome 2 open reading frame 83	CR749679|C2orf83|56918|chromosome 2 open reading frame 83	AK055355|C2orf83|56918|chromosome 2 open reading frame 83	NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83	NM_020161|C2orf83|56918|chromosome 2 open reading frame 83
hg18_v1_chr6_+_127706451_127706483	0.00531689	SOX2.p2	
hg18_v1_chr1_-_78217360_78217366	0.00527988	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr9_+_8848130_8848137	0.00526065	SOX2.p2	
hg18_v1_chr18_+_647461_647632	0.00525412	SOX2.p2	CR601528|TYMS|7298|thymidylate synthetase	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg18_v1_chr1_-_152422282_152422282	0.00523507	SOX2.p2	BC073144|TPM3|7170|tropomyosin 3
hg18_v1_chrX_+_144136798_144136798	0.00523064	SOX2.p2	DQ336118|SPANXN1|494118|SPANX family, member N1	DQ336119|SPANXN1|494118|SPANX family, member N1	DQ336120|SPANXN1|494118|SPANX family, member N1	DQ336121|SPANXN1|494118|SPANX family, member N1	NM_001009614|SPANXN1|494118|SPANX family, member N1
hg18_v1_chr14_-_73250094_73250935	0.0052028	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg18_v1_chr1_-_223683141_223683141	0.00518256	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr3_-_185085362_185085383	0.00517026	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr19_+_3713671_3713677	0.00516386	SOX2.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr22_-_16020076_16020152	0.00514088	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr7_-_127833231_127833275	0.00514029	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg18_v1_chr15_+_48434941_48435041	0.00511943	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr1_+_10413016_10413144	0.00511383	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr11_+_44026106_44026140	0.00510121	SOX2.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr6_-_76010169_76010229	0.00510004	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR610116|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chrX_+_37750778_37750810	0.0050952	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr15_+_80741827_80741867	0.00508476	SOX2.p2	AK309746|LOC80154|80154|hypothetical LOC80154	AK310769|LOC80154|80154|hypothetical LOC80154	BC072390|LOC80154|80154|hypothetical LOC80154	AK291684|LOC80154|80154|hypothetical LOC80154	AK309420|LOC80154|80154|hypothetical LOC80154	AK307285|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr14_-_34414603_34414603	0.00502138	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr12_-_70343943_70344015	0.00499787	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr14_-_19993032_19993106	0.00495412	SOX2.p2	CR594397|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR597694|OSGEP|55644|O-sialoglycoprotein endopeptidase	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr9_+_114289178_114289289	0.00494598	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr13_+_110653407_110653440	0.00494435	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr15_+_38648823_38649063	0.00491317	SOX2.p2	AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	CR624718|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2
hg18_v1_chr12_-_55040183_55040303	0.00490144	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr6_-_16869579_16869773	0.00489928	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr17_+_7252225_7252225	0.00489434	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg18_v1_chr11_-_82675024_82675082	0.00488627	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg18_v1_chr10_+_102662675_102662856	0.00487594	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr15_+_20507195_20507195	0.00483912	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr17_+_58981573_58981581	0.00483731	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr11_-_58099884_58099965	0.0048205	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr2_+_32356460_32356473	0.00481718	SOX2.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr14_+_69148066_69148222	0.00480662	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg18_v1_chr13_-_51631996_51631996	0.00478756	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr6_+_99979490_99979580	0.00476474	SOX2.p2	
hg18_v1_chr15_-_87565813_87566007	0.00476393	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg18_v1_chr1_+_179269183_179269183	0.00475437	SOX2.p2	NM_001194999|MR1|3140|major histocompatibility complex, class I-related	NM_001195000|MR1|3140|major histocompatibility complex, class I-related	NM_001195035|MR1|3140|major histocompatibility complex, class I-related	NM_001531|MR1|3140|major histocompatibility complex, class I-related
hg18_v1_chr20_+_29790564_29790832	0.00474	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg18_v1_chr21_+_39099717_39099777	0.00473841	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr15_+_72005864_72005872	0.00472938	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr5_-_180175146_180175151	0.00472574	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr19_+_45546369_45546492	0.00471661	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr2_+_148318770_148318841	0.00471	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr16_+_65701428_65701579	0.00470378	SOX2.p2	
hg18_v1_chr16_+_2503978_2503987	0.00470264	SOX2.p2	CR601237|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599331|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr22_+_18485068_18485075	0.0046806	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg18_v1_chr12_-_51734434_51734495	0.00465063	SOX2.p2	AK096472|LOC283335|283335|hypothetical LOC283335
hg18_v1_chrX_-_73751185_73751194	0.00463291	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr19_+_45774626_45774631	0.00463246	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr11_-_64302720_64302748	0.00457901	SOX2.p2	Y08766|SF1|7536|splicing factor 1
hg18_v1_chr8_+_23442331_23442388	0.00456053	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr17_+_46176105_46176113	0.00454403	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr9_+_114671635_114671738	0.0045177	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg18_v1_chr19_+_15058790_15058876	0.00451631	SOX2.p2	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1
hg18_v1_chr11_-_60885849_60885900	0.00450383	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr3_+_185521139_185521176	0.00448943	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr11_+_110916442_110916442	0.00448653	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg18_v1_chr17_+_40141586_40141591	0.00447833	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr16_+_24458349_24458440	0.00447237	SOX2.p2	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr2_+_112996053_112996198	0.00445979	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg18_v1_chr11_-_5494391_5494531	0.0044467	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chr6_-_47385313_47385382	0.00442744	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr4_+_123311207_123311207	0.00441722	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr18_+_53862386_53862683	0.00437894	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr14_-_52689782_52689819	0.00437893	SOX2.p2	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr12_-_56432377_56432383	0.0043731	SOX2.p2	CR597992|CDK4|1019|cyclin-dependent kinase 4	BC015669|CDK4|1019|cyclin-dependent kinase 4	CR609991|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr17_-_77422526_77422549	0.00435142	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR594088|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr10_-_23673777_23673777	0.00435049	SOX2.p2	BC035732|C10orf67|256815|chromosome 10 open reading frame 67	NM_153714|C10orf67|256815|chromosome 10 open reading frame 67
hg18_v1_chr17_+_58981550_58981566	0.00433972	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr1_+_243199690_243199793	0.00432337	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr1_-_180908639_180908689	0.00431092	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr12_-_47868563_47868740	0.00430959	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr10_+_17311282_17311282	0.00429218	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg18_v1_chr1_+_61315378_61315510	0.00427863	SOX2.p2	
hg18_v1_chr20_+_9406460_9406567	0.0042646	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr11_-_107235123_107235123	0.00424264	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr9_-_35101534_35101570	0.00423912	SOX2.p2	AB040972|KIAA1539|80256|KIAA1539
hg18_v1_chr18_+_647633_647663	0.00421927	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	CR605696|TYMS|7298|thymidylate synthetase	CR612901|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase	CR618525|TYMS|7298|thymidylate synthetase	CR625557|TYMS|7298|thymidylate synthetase	CR611174|TYMS|7298|thymidylate synthetase
hg18_v1_chr11_-_82460531_82460560	0.00421915	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr1_+_86942810_86942868	0.0042095	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr22_+_25155220_25155428	0.00418748	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr3_+_130641828_130641828	0.0041741	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr13_-_44048601_44048700	0.00416107	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr2_+_176677479_176677495	0.00409899	SOX2.p2	
hg18_v1_chr17_-_53651964_53651964	0.00408826	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg18_v1_chr1_-_114855200_114855266	0.00406865	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr6_-_33276141_33276231	0.00406419	SOX2.p2	BT007280|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr14_+_89933055_89933098	0.00405993	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr10_+_97793054_97793689	0.00397814	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr2_-_198007967_198007982	0.0039528	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr21_+_16024157_16024235	0.0039361	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr5_+_109053034_109053054	0.00393311	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr9_-_124630630_124630755	0.00388985	SOX2.p2	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr10_+_80740584_80740716	0.00388183	SOX2.p2	BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1	BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr4_-_40911212_40911440	0.00387294	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr12_-_55405577_55405594	0.00387152	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg18_v1_chr16_+_65196125_65196129	0.00386846	SOX2.p2	CR621105|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR625182|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr1_+_86943103_86943182	0.00386574	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr6_-_42821761_42821788	0.0038616	SOX2.p2	CR602269|TBCC|6903|tubulin folding cofactor C	CR590261|TBCC|6903|tubulin folding cofactor C	CR590736|TBCC|6903|tubulin folding cofactor C	CR604530|TBCC|6903|tubulin folding cofactor C	CR623339|TBCC|6903|tubulin folding cofactor C	BT007002|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr22_-_18484744_18484792	0.00386019	SOX2.p2	CR592601|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR608558|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chr19_+_45774569_45774610	0.00385367	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr1_-_120240635_120240660	0.00384512	SOX2.p2	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30
hg18_v1_chr19_-_46595053_46595212	0.00383903	SOX2.p2	CR620099|EXOSC5|56915|exosome component 5	CR592651|EXOSC5|56915|exosome component 5	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	CR621752|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg18_v1_chr12_-_70343656_70343699	0.00383636	SOX2.p2	
hg18_v1_chr16_+_65196031_65196119	0.00382432	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr14_+_22375656_22375697	0.00381529	SOX2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr3_-_39298187_39298236	0.00381398	SOX2.p2	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg18_v1_chr2_+_70168487_70168517	0.00380756	SOX2.p2	
hg18_v1_chr19_-_63353956_63353965	0.0037969	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg18_v1_chr12_+_68923043_68923076	0.0037816	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg18_v1_chr17_-_23950171_23950198	0.00377354	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr3_-_185085384_185085420	0.00377346	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr1_+_63605912_63605925	0.00376592	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr5_-_140033310_140033354	0.00375498	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg18_v1_chr17_+_22982372_22982378	0.00372917	SOX2.p2	BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR616420|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr2_+_70168407_70168436	0.00372665	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr12_+_119391982_119392074	0.00370851	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr7_+_63410620_63410620	0.00370809	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg18_v1_chr13_+_44592647_44592790	0.00367236	SOX2.p2	CR609785|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	CR598374|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr19_+_46595563_46595584	0.00362948	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR595459|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR601175|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625376|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR591555|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR620134|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625203|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR612929|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592963|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592078|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626152|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR598478|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR604642|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR610394|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR618519|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592674|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr11_-_57173823_57173992	0.00361205	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg18_v1_chr16_+_66476281_66476282	0.00360676	SOX2.p2	AY358782|NRN1L|123904|neuritin 1-like	NM_198443|NRN1L|123904|neuritin 1-like	BC100863|NRN1L|123904|neuritin 1-like	BC100864|NRN1L|123904|neuritin 1-like	BC100865|NRN1L|123904|neuritin 1-like	BC100866|NRN1L|123904|neuritin 1-like
hg18_v1_chr13_+_47775887_47775887	0.00359409	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr1_-_210654696_210654857	0.00358552	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg18_v1_chr1_-_154988045_154988075	0.00358496	SOX2.p2	CR626656|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr20_+_29931257_29931292	0.00358263	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg18_v1_chr11_+_63463009_63463111	0.00357949	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg18_v1_chr4_-_77547481_77547481	0.003539	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg18_v1_chr12_-_55758840_55758848	0.0035285	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr19_-_2691053_2691081	0.00352381	SOX2.p2	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg18_v1_chr16_-_30529129_30529185	0.00352134	SOX2.p2	AK310459|ZNF689|115509|zinc finger protein 689	AB065282|ZNF689|115509|zinc finger protein 689	BC014000|ZNF689|115509|zinc finger protein 689	NM_138447|ZNF689|115509|zinc finger protein 689
hg18_v1_chr10_+_103995297_103995417	0.00351763	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr2_+_113015962_113016083	0.00350243	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg18_v1_chr4_-_111339201_111339268	0.00349852	SOX2.p2	BC001305|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK027031|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_001130721|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_024090|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr6_-_127706384_127706446	0.00348114	SOX2.p2	AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1	BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1	AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr19_+_977582_977598	0.00346844	SOX2.p2	AK295271|CNN2|1265|calponin 2	CR603928|CNN2|1265|calponin 2
hg18_v1_chr4_+_75242671_75242788	0.00344789	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr22_-_16637194_16637220	0.00344728	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg18_v1_chr3_+_130641779_130641826	0.00342686	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr7_+_2565202_2565229	0.00341041	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg18_v1_chr3_+_61522922_61523111	0.0034075	SOX2.p2	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G
hg18_v1_chr1_+_171950684_171950754	0.00339776	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr22_-_16020168_16020190	0.00338673	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr17_-_53950191_53950293	0.00338112	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr16_+_4842077_4842216	0.00338096	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr2_-_102719732_102719799	0.00337905	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	CR599593|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg18_v1_chr15_+_72005875_72005880	0.00336218	SOX2.p2	CR618115|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr16_-_30453499_30453504	0.00336078	SOX2.p2	AK292192|ZNF747|65988|zinc finger protein 747
hg18_v1_chr4_+_37131946_37131994	0.00334048	SOX2.p2	NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19	BC037906|C4orf19|55286|chromosome 4 open reading frame 19
hg18_v1_chr12_+_70343943_70344203	0.0033189	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg18_v1_chr10_-_135290288_135290288	0.00331522	SOX2.p2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B
hg18_v1_chr9_-_139202855_139202877	0.0033075	SOX2.p2	NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr5_+_180399830_180399856	0.00326273	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg18_v1_chrX_+_119379967_119380024	0.00324695	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg18_v1_chr19_+_977555_977580	0.00324014	SOX2.p2	CR616871|CNN2|1265|calponin 2
hg18_v1_chr9_-_35062643_35062738	0.00323184	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg18_v1_chr5_-_134762764_134762783	0.00322982	SOX2.p2	CR624606|H2AFY|9555|H2A histone family, member Y	CR607311|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr20_+_34603290_34603310	0.00322616	SOX2.p2	NM_006097|MYL9|10398|myosin, light chain 9, regulatory	NM_181526|MYL9|10398|myosin, light chain 9, regulatory
hg18_v1_chr5_-_176258920_176258938	0.00320654	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg18_v1_chr17_+_72880967_72881074	0.00317024	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr14_-_19992809_19992862	0.00314631	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr10_-_61336190_61336224	0.00311885	SOX2.p2	S72869|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr19_+_45774632_45774632	0.00311864	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr1_+_171950759_171950854	0.00311452	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr9_-_138454071_138454087	0.00309778	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr11_+_101488380_101488454	0.00309231	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg18_v1_chr19_-_47155340_47155381	0.00306071	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg18_v1_chr16_-_57221240_57221252	0.00300277	SOX2.p2	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg18_v1_chr10_+_7785331_7785345	0.00297404	SOX2.p2	AK225329|ITIH2|3698|inter-alpha (globulin) inhibitor H2	AK297334|ITIH2|3698|inter-alpha (globulin) inhibitor H2	X07173|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr14_+_44674892_44674892	0.00297115	SOX2.p2	AK093422|FANCM|57697|Fanconi anemia, complementation group M
hg18_v1_chr6_-_43089634_43089642	0.00294489	SOX2.p2	AK309759|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr19_+_62836322_62836433	0.00293752	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	CR596216|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg18_v1_chrX_-_100193500_100193575	0.002924	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chr13_-_98708549_98708682	0.00292334	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr1_-_78217278_78217351	0.00291859	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr7_+_99613282_99613318	0.00291678	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr8_-_30635112_30635132	0.00290154	SOX2.p2	CR611388|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr6_+_88356503_88356610	0.00289662	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	CR619723|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg18_v1_chr15_+_53488014_53488160	0.0028822	SOX2.p2	NM_001198784|FLJ27352|145788|hypothetical LOC145788	AK130862|FLJ27352|145788|hypothetical LOC145788	BX648577|FLJ27352|145788|hypothetical LOC145788
hg18_v1_chr3_+_57718067_57718418	0.0028306	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr9_-_106730157_106730254	0.00282126	SOX2.p2	BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr1_-_153560532_153560600	0.00280596	SOX2.p2	BC080538|C1orf104|284618|chromosome 1 open reading frame 104	NM_001039517|C1orf104|284618|chromosome 1 open reading frame 104	BC062571|C1orf104|284618|chromosome 1 open reading frame 104
hg18_v1_chr17_-_24069299_24069412	0.00279616	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr12_+_122762835_122762863	0.00279591	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr7_-_27162688_27162853	0.00279395	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg18_v1_chr19_+_45774636_45774742	0.00276896	SOX2.p2	CR598538|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr14_+_66896824_66896829	0.00276615	SOX2.p2	CR618395|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr20_+_61622985_61623074	0.00275571	SOX2.p2	CR608021|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg18_v1_chr1_+_117404467_117404487	0.00275451	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr12_+_64869181_64869269	0.00275301	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr22_+_18484810_18485027	0.00275108	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg18_v1_chrX_+_70420259_70420278	0.00274977	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr14_-_22974707_22974710	0.00274	SOX2.p2	AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta
hg18_v1_chr10_+_127398215_127398389	0.00272363	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg18_v1_chr6_+_126112506_126112565	0.0027118	SOX2.p2	AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr17_-_53784494_53784576	0.00270734	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR616121|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605018|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605330|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594796|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR613341|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594476|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR622557|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg18_v1_chr14_+_66896813_66896822	0.00270411	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr9_+_35819208_35819279	0.00270196	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	CR608738|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr19_-_12853140_12853234	0.0026861	SOX2.p2	FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal	BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal	BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal	CR616269|DNASE2|1777|deoxyribonuclease II, lysosomal	CR612006|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chr2_+_70168064_70168133	0.0026697	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1	CR620735|PCBP1|5093|poly(rC) binding protein 1	CR624156|PCBP1|5093|poly(rC) binding protein 1	CR593186|PCBP1|5093|poly(rC) binding protein 1	CR596610|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chrX_-_16798363_16798381	0.00266692	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr5_-_60493903_60493967	0.00265768	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr17_-_53282376_53282431	0.0026533	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	CR622466|MRPS23|51649|mitochondrial ribosomal protein S23	CR622139|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg18_v1_chr10_-_27483315_27483337	0.00264483	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr6_-_42822525_42822535	0.00263455	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr12_-_54938385_54938447	0.00262694	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr6_+_41997212_41997278	0.00261544	SOX2.p2	CR624209|BYSL|705|bystin-like	CR600573|BYSL|705|bystin-like	CR604574|BYSL|705|bystin-like	CR590918|BYSL|705|bystin-like	CR613680|BYSL|705|bystin-like	CR621938|BYSL|705|bystin-like
hg18_v1_chr4_-_113656762_113656786	0.00261264	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr15_+_72005847_72005862	0.0026077	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr3_-_49041764_49041789	0.00260284	SOX2.p2	DQ893403|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	DQ896721|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg18_v1_chr9_-_106338914_106338957	0.0025951	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg18_v1_chr9_+_94127561_94127561	0.00255105	SOX2.p2	CR592049|CENPP|401541|centromere protein P	NM_001012267|CENPP|401541|centromere protein P
hg18_v1_chr15_+_43667050_43667080	0.0025221	SOX2.p2	AK128626|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr12_+_132167057_132167119	0.00251159	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg18_v1_chr19_+_46595558_46595562	0.00251016	SOX2.p2	CR620302|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr17_+_38916758_38916888	0.00249107	SOX2.p2	AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg18_v1_chr17_-_23950142_23950165	0.00247954	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr3_-_49041817_49041851	0.00247862	SOX2.p2	BC009236|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC015567|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC012840|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	J04208|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC006124|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	AK293397|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg18_v1_chr2_+_70168218_70168227	0.00241266	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr16_-_29845024_29845031	0.00237683	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr17_-_44794325_44794833	0.00236135	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr1_+_86943074_86943100	0.00236049	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chrX_+_118598325_118598325	0.00234645	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr17_+_40141501_40141576	0.00233818	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr3_+_198961020_198961158	0.00231444	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr14_-_19992681_19992802	0.0023059	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR624248|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR614622|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR610109|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr4_+_6768682_6768797	0.00229897	SOX2.p2	CR625701|CNO|55330|cappuccino homolog (mouse)	CR626399|CNO|55330|cappuccino homolog (mouse)	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)	CR598245|CNO|55330|cappuccino homolog (mouse)
hg18_v1_chr9_-_35062578_35062592	0.00225841	SOX2.p2	CR606334|VCP|7415|valosin containing protein
hg18_v1_chr10_+_129237602_129237602	0.00225516	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr6_+_47857733_47857761	0.00223847	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5
hg18_v1_chr19_+_45774620_45774622	0.00223833	SOX2.p2	CR590661|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr12_+_46802695_46802829	0.00222799	SOX2.p2	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg18_v1_chr2_-_190357320_190357367	0.00221888	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr4_-_103485309_103485390	0.00221497	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr9_-_139202804_139202830	0.00220728	SOX2.p2	AF191337|ANAPC2|29882|anaphase promoting complex subunit 2	DQ890852|ANAPC2|29882|anaphase promoting complex subunit 2	DQ894007|ANAPC2|29882|anaphase promoting complex subunit 2	BC032503|ANAPC2|29882|anaphase promoting complex subunit 2	AK296204|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr7_-_26206845_26206888	0.00219369	SOX2.p2	BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr3_+_4510030_4510033	0.00219307	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr13_-_25693821_25693873	0.00217329	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr5_+_99898922_99899022	0.00217255	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	CR601145|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr19_+_57464635_57464657	0.00216652	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr17_-_3992993_3993010	0.00215289	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr2_-_162639297_162639308	0.00215144	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr3_+_101694244_101694302	0.00210541	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr16_+_68890559_68890596	0.00210296	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR593012|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR625899|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr9_-_94127440_94127453	0.00209521	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg18_v1_chr17_-_37422656_37422708	0.00206104	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg18_v1_chr7_+_139124502_139124515	0.00205441	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr16_+_68890597_68890701	0.00205043	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR594442|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604580|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604732|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr5_-_176671437_176671544	0.00204603	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	CR613684|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	CR626344|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg18_v1_chrX_-_74660024_74660061	0.00203829	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr2_-_160277083_160277221	0.0020313	SOX2.p2	BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr5_+_36912595_36912648	0.00201425	SOX2.p2	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr6_+_26264537_26264618	0.00200794	SOX2.p2	NM_005321|HIST1H1E|3008|histone cluster 1, H1e	BC096168|HIST1H1E|3008|histone cluster 1, H1e	BC096169|HIST1H1E|3008|histone cluster 1, H1e	BC096170|HIST1H1E|3008|histone cluster 1, H1e	BC099632|HIST1H1E|3008|histone cluster 1, H1e	EF065554|HIST1H1E|3008|histone cluster 1, H1e	EF065555|HIST1H1E|3008|histone cluster 1, H1e
hg18_v1_chrX_-_19727775_19727818	0.00200658	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr7_-_6832382_6832465	0.00200612	SOX2.p2	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_198097|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr6_-_88356411_88356442	0.0019766	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr3_-_124822113_124822219	0.00197418	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg18_v1_chr3_-_57558193_57558268	0.00195116	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg18_v1_chr1_+_53697659_53697732	0.0019239	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr12_+_56462794_56462885	0.00191037	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	CR592271|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial	CR622683|TSFM|10102|Ts translation elongation factor, mitochondrial	CR606259|TSFM|10102|Ts translation elongation factor, mitochondrial
hg18_v1_chr6_+_43846155_43846296	0.00190802	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr6_+_144206165_144206200	0.00190516	SOX2.p2	CR593625|LTV1|84946|LTV1 homolog (S. cerevisiae)	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg18_v1_chr19_-_60827732_60827745	0.00189789	SOX2.p2	CR618267|ZNF784|147808|zinc finger protein 784	AK074859|ZNF784|147808|zinc finger protein 784
hg18_v1_chr2_+_86521781_86521781	0.0018964	SOX2.p2	NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A
hg18_v1_chr10_-_27483285_27483310	0.00189138	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr11_-_65382313_65382379	0.00188921	SOX2.p2	CR617396|CFL1|1072|cofilin 1 (non-muscle)	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg18_v1_chr5_-_157011665_157011748	0.00188345	SOX2.p2	
hg18_v1_chr14_-_87529600_87529659	0.00188262	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr11_+_6475065_6475106	0.0018746	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg18_v1_chr7_-_26206889_26206890	0.00185557	SOX2.p2	AK129839|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	AK289429|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr8_-_72919161_72919204	0.00182656	SOX2.p2	AF060154|MSC|9242|musculin
hg18_v1_chr18_+_70317548_70317603	0.0018263	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr1_-_148166312_148166325	0.00182109	SOX2.p2	CR592826|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR621149|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR605255|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR620359|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg18_v1_chr5_-_150264486_150264566	0.00181273	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg18_v1_chr17_+_37422550_37422605	0.00177956	SOX2.p2	BC063498|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2
hg18_v1_chr7_-_8268666_8268730	0.00176974	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr3_+_73128629_73128665	0.00176196	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr18_+_61568467_61568467	0.00175595	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg18_v1_chr9_+_130684601_130684601	0.00171724	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr12_-_55040179_55040182	0.00171101	SOX2.p2	AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr4_-_55686503_55686520	0.00170191	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg18_v1_chrX_+_110226030_110226084	0.00167609	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg18_v1_chr9_-_32542573_32542632	0.0016455	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr22_+_37407925_37407941	0.00162281	SOX2.p2	AK312076|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CU013025|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CU013313|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	DQ893045|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	DQ896289|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR616741|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR599084|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR617759|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr15_+_72005839_72005845	0.00160621	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr3_+_73128667_73128695	0.00160585	SOX2.p2	BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	CR606592|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr4_-_149582754_149582825	0.00159513	SOX2.p2	BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr6_-_47385605_47385703	0.00157086	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr6_+_31604717_31604717	0.00155662	SOX2.p2	NM_001011700|MCCD1|401250|mitochondrial coiled-coil domain 1
hg18_v1_chr1_+_221633337_221633440	0.00153689	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg18_v1_chr14_-_76564727_76564899	0.00153595	SOX2.p2	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr9_-_138454095_138454169	0.00150555	SOX2.p2	BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr2_+_70168285_70168378	0.00150042	SOX2.p2	Z29505|PCBP1|5093|poly(rC) binding protein 1	X78137|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr6_+_126112588_126112615	0.00149991	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr4_-_89299034_89299089	0.0014999	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg18_v1_chr8_-_38245694_38245932	0.00147774	SOX2.p2	CR591117|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606207|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR597379|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606143|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B
hg18_v1_chr3_+_49210864_49210864	0.00147311	SOX2.p2	BC036202|CCDC36|339834|coiled-coil domain containing 36	NM_178173|CCDC36|339834|coiled-coil domain containing 36
hg18_v1_chr11_-_116163904_116163939	0.00147088	SOX2.p2	CR621542|ZNF259|8882|zinc finger protein 259	AK301227|ZNF259|8882|zinc finger protein 259	CR622469|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	CR594434|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	CR626297|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg18_v1_chr17_+_63462347_63462394	0.00145851	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR606537|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr6_-_47385599_47385599	0.00145034	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chrX_+_102852492_102852492	0.00144132	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg18_v1_chr6_-_105414440_105414471	0.00143468	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr10_-_128067052_128067056	0.00142818	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr16_+_65195435_65195560	0.00140594	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr14_+_74353417_74353490	0.0014042	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg18_v1_chr22_+_27498679_27498720	0.00139934	SOX2.p2	BC065549|CCDC117|150275|coiled-coil domain containing 117	BC053874|CCDC117|150275|coiled-coil domain containing 117	BC040488|CCDC117|150275|coiled-coil domain containing 117	AK302925|CCDC117|150275|coiled-coil domain containing 117
hg18_v1_chr3_+_179759181_179759311	0.00139792	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr1_+_243199906_243200064	0.00138829	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chrX_-_119486874_119487030	0.00138245	SOX2.p2	AK304405|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr2_+_70168238_70168264	0.00137439	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1	CR600333|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr14_+_66896830_66896838	0.00136963	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR600389|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR604321|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr4_-_124063167_124063255	0.0013661	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr1_-_152422218_152422257	0.00136406	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg18_v1_chr14_-_20922264_20922264	0.00134497	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr9_+_132558972_132559004	0.00130455	SOX2.p2	AK001916|EXOSC2|23404|exosome component 2	AK296605|EXOSC2|23404|exosome component 2	NM_014285|EXOSC2|23404|exosome component 2	CR622078|EXOSC2|23404|exosome component 2	AK022460|EXOSC2|23404|exosome component 2	AK090512|EXOSC2|23404|exosome component 2	AK303163|EXOSC2|23404|exosome component 2	BC000747|EXOSC2|23404|exosome component 2	DQ892753|EXOSC2|23404|exosome component 2	EU176744|EXOSC2|23404|exosome component 2	CR590387|EXOSC2|23404|exosome component 2
hg18_v1_chr6_-_30762957_30762971	0.00130359	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr17_+_7269658_7269683	0.00128862	SOX2.p2	BC031286|C17orf74|201243|chromosome 17 open reading frame 74	BC048010|C17orf74|201243|chromosome 17 open reading frame 74	NM_175734|C17orf74|201243|chromosome 17 open reading frame 74	BC044816|C17orf74|201243|chromosome 17 open reading frame 74
hg18_v1_chr15_-_23659962_23660025	0.00128804	SOX2.p2	AB051358|ATP10A|57194|ATPase, class V, type 10A
hg18_v1_chr16_+_56327168_56327282	0.00126852	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg18_v1_chr3_+_9748494_9748603	0.00124658	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr16_-_74147608_74147726	0.00120165	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	CR620108|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg18_v1_chr15_-_89366689_89366859	0.00120026	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	CR604260|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg18_v1_chr10_+_44775155_44775321	0.00119736	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr6_-_74286876_74286906	0.0011934	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr6_-_137582244_137582259	0.00119266	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr3_+_10043123_10043129	0.00115183	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr15_-_58558410_58558722	0.00114024	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr6_-_30693003_30693062	0.00113895	SOX2.p2	BC150310|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr1_-_158161924_158161963	0.00113819	SOX2.p2	CR621820|TAGLN2|8407|transgelin 2	CR601283|TAGLN2|8407|transgelin 2
hg18_v1_chr3_-_49041862_49041887	0.00113492	SOX2.p2	NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg18_v1_chr19_+_62483606_62483793	0.00112747	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg18_v1_chr11_+_65164167_65164167	0.00110937	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr10_-_5436781_5436796	0.00110516	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg18_v1_chr4_-_185921384_185921392	0.00110414	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr3_-_127856563_127856646	0.00108498	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg18_v1_chr12_-_70343790_70343940	0.00108165	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr7_-_105712646_105712873	0.00107797	SOX2.p2	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase	BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase	CR593609|NAMPT|10135|nicotinamide phosphoribosyltransferase	NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase
hg18_v1_chr9_-_35062545_35062569	0.00106698	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg18_v1_chr17_-_71580117_71580170	0.00106128	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr17_+_72827968_72828003	0.00105701	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg18_v1_chr7_-_33047042_33047046	0.00105572	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr15_-_54997964_54998093	0.00105334	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr8_+_74369647_74369999	0.00103335	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg18_v1_chr12_-_48705427_48705573	0.0010245	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg18_v1_chr8_+_69026895_69026917	0.000997553	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr19_+_62483093_62483243	0.000996637	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr18_-_42956645_42956729	0.00099244	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596950|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596209|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1	CR614259|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr11_-_64301807_64301807	0.000986843	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg18_v1_chr6_-_88356445_88356472	0.000974357	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_+_10412745_10412745	0.000962381	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr1_+_20081510_20081590	0.000948395	SOX2.p2	
hg18_v1_chr6_+_34312641_34312657	0.000928952	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	CR614979|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr1_+_200124412_200124439	0.000922563	SOX2.p2	AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr6_+_88174408_88174462	0.000914702	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chr3_+_10043097_10043121	0.000888251	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr12_+_77782579_77782633	0.000886144	SOX2.p2	AK126908|SYT1|6857|synaptotagmin I	NM_005639|SYT1|6857|synaptotagmin I
hg18_v1_chr1_+_183392991_183393047	0.000883506	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr2_-_206732348_206732447	0.000880306	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg18_v1_chr6_-_30748597_30748759	0.000871179	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr8_+_17478214_17478214	0.000854186	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg18_v1_chr13_-_40491491_40491507	0.000850829	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr11_+_12355600_12355770	0.000840317	SOX2.p2	AK098504|PARVA|55742|parvin, alpha	CR624090|PARVA|55742|parvin, alpha	AF237771|PARVA|55742|parvin, alpha	AK022316|PARVA|55742|parvin, alpha	BC016713|PARVA|55742|parvin, alpha	CR612774|PARVA|55742|parvin, alpha	CR590611|PARVA|55742|parvin, alpha	AK001655|PARVA|55742|parvin, alpha	NM_018222|PARVA|55742|parvin, alpha	CR612241|PARVA|55742|parvin, alpha	BC014535|PARVA|55742|parvin, alpha	CR599976|PARVA|55742|parvin, alpha	EU832601|PARVA|55742|parvin, alpha	AF325830|PARVA|55742|parvin, alpha
hg18_v1_chr9_-_32542550_32542568	0.000838684	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr3_+_157071117_157071139	0.000835183	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr3_-_113842652_113842682	0.000834156	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr17_+_56032271_56032381	0.000801771	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr1_-_148166247_148166295	0.000801518	SOX2.p2	DQ892971|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	DQ896220|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	EU176749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK223322|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC004273|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC013886|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK310495|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR619749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR591497|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	CR595486|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg18_v1_chr2_-_38683518_38683571	0.000799869	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr22_-_35011703_35011715	0.000787718	SOX2.p2	BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle
hg18_v1_chr12_+_64869296_64869345	0.00077871	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr13_-_29322671_29322734	0.000774251	SOX2.p2	AK056580|UBL3|5412|ubiquitin-like 3
hg18_v1_chr3_+_9826643_9826643	0.000762451	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg18_v1_chr11_+_124539814_124539859	0.000754257	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg18_v1_chr9_-_138880530_138880589	0.000749325	SOX2.p2	BT009863|EDF1|8721|endothelial differentiation-related factor 1	CR541914|EDF1|8721|endothelial differentiation-related factor 1	DQ891577|EDF1|8721|endothelial differentiation-related factor 1	DQ894770|EDF1|8721|endothelial differentiation-related factor 1	AB002282|EDF1|8721|endothelial differentiation-related factor 1	AB002283|EDF1|8721|endothelial differentiation-related factor 1	BC015500|EDF1|8721|endothelial differentiation-related factor 1	NM_003792|EDF1|8721|endothelial differentiation-related factor 1	NM_153200|EDF1|8721|endothelial differentiation-related factor 1
hg18_v1_chr16_+_14835087_14835201	0.000740872	SOX2.p2	AL832855|NOMO2|283820|NODAL modulator 2	NM_014287|NOMO1|23420|NODAL modulator 1	BC041131|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC028389|NOMO2|283820|NODAL modulator 2	BC065535|NOMO1|23420|NODAL modulator 1
hg18_v1_chr2_-_203485193_203485193	0.000734381	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg18_v1_chr5_+_67622242_67622383	0.000724122	SOX2.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr7_-_150352484_150352518	0.000700004	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg18_v1_chr6_+_26128656_26128696	0.000684914	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg18_v1_chr16_-_29845040_29845071	0.00067228	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr5_+_96296842_96296856	0.000669764	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr14_+_66896840_66896900	0.000657702	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr1_-_23758503_23758640	0.000644394	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr4_-_82611995_82612020	0.000643186	SOX2.p2	BX648337|RASGEF1B|153020|RasGEF domain family, member 1B	BC121003|RASGEF1B|153020|RasGEF domain family, member 1B	BC121004|RASGEF1B|153020|RasGEF domain family, member 1B
hg18_v1_chr22_+_37407921_37407924	0.000634686	SOX2.p2	BC009363|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR456475|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR594101|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR611731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr2_+_210575600_210575630	0.000621713	SOX2.p2	BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase	CR625804|RPE|6120|ribulose-5-phosphate-3-epimerase	AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase	AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase	AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase	AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase	AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase	AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase	BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase	BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase	CR621657|RPE|6120|ribulose-5-phosphate-3-epimerase	NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase	EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase	EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase
hg18_v1_chr1_+_234753361_234753361	0.000617707	SOX2.p2	AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8
hg18_v1_chr2_+_84986510_84986652	0.000603804	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr2_+_105799354_105799461	0.000602251	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg18_v1_chr16_-_29844855_29845019	0.000601958	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr10_-_123724698_123724802	0.000575386	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg18_v1_chrX_+_17563333_17563333	0.000560498	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg18_v1_chr19_+_46462816_46462825	0.000549116	SOX2.p2	AK290729|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr19_+_52113772_52113772	0.000546202	SOX2.p2	AB051509|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	AF159851|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC131565|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC150257|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	NM_004491|GRLF1|2909|glucocorticoid receptor DNA binding factor 1
hg18_v1_chr6_-_47385604_47385604	0.0005401	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr11_-_116163948_116163948	0.000537863	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg18_v1_chr4_+_140806536_140806632	0.000534971	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr20_-_44468660_44468753	0.000526314	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg18_v1_chr17_+_58981708_58981781	0.000524213	SOX2.p2	CR606772|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr1_-_115060904_115060911	0.000517068	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr17_+_77261401_77261427	0.000509339	SOX2.p2	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chrX_-_64112993_64113155	0.000492569	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	CR614211|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg18_v1_chr6_-_137582237_137582239	0.000488197	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr12_+_6950204_6950336	0.000471165	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr17_+_27701251_27701288	0.00047028	SOX2.p2	CR617452|ZNF207|7756|zinc finger protein 207	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg18_v1_chr20_+_56989717_56989772	0.000465591	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	CR615187|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr2_-_130646415_130646527	0.000451735	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg18_v1_chr3_-_50335113_50335284	0.00044515	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	CR595904|HYAL2|8692|hyaluronoglucosaminidase 2	CR597868|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg18_v1_chr11_+_94440045_94440068	0.000432511	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr22_+_37407906_37407920	0.000425651	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr22_+_37407899_37407903	0.000424455	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr8_+_126079929_126079985	0.000394398	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg18_v1_chr18_-_71049977_71050001	0.000392379	SOX2.p2	
hg18_v1_chr5_-_146869811_146869828	0.000379338	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr6_-_90119329_90119684	0.000361343	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr19_-_57366707_57366707	0.000353568	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg18_v1_chr13_+_44592585_44592644	0.000344102	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr11_-_61491684_61491763	0.000342462	SOX2.p2	CR608224|FTH1|2495|ferritin, heavy polypeptide 1	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr6_-_88356385_88356409	0.000319811	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR611793|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR625441|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr20_+_34635362_34635469	0.000316474	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr15_-_39623734_39623748	0.000314706	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg18_v1_chr9_-_35062596_35062636	0.00028393	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg18_v1_chr2_+_70168443_70168483	0.00026773	SOX2.p2	CR598326|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr12_-_56432292_56432374	0.000264635	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	CR591116|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	CR598582|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4	CR590586|CDK4|1019|cyclin-dependent kinase 4	CR616342|CDK4|1019|cyclin-dependent kinase 4	CR608247|CDK4|1019|cyclin-dependent kinase 4	CR594194|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chrX_-_11593741_11593741	0.000255467	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr4_-_84595967_84596048	0.000252437	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg18_v1_chr1_-_85514580_85514867	0.000245261	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg18_v1_chr11_+_100367929_100368020	0.000240764	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg18_v1_chr16_+_68016070_68016087	0.000234549	SOX2.p2	CR591022|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR599834|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR593982|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR601351|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR601527|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR610534|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR611151|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR611325|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR614836|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR591474|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr14_+_19993204_19993283	0.000229566	SOX2.p2	CR605968|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594913|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR617692|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR618727|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR620565|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR623328|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603451|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603476|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR613058|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR622630|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611116|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR597601|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR607088|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR610342|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR599111|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR608824|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR609502|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611978|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR605079|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR593576|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR595578|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr5_+_94916533_94916738	0.000222317	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K
hg18_v1_chr10_-_88707299_88707404	0.000215003	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg18_v1_chr12_-_12310969_12311250	0.000209718	SOX2.p2	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr12_-_109390439_109390471	0.000208324	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	CR613385|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr2_+_70168200_70168215	0.000207156	SOX2.p2	CR613158|PCBP1|5093|poly(rC) binding protein 1	U24223|PCBP1|5093|poly(rC) binding protein 1	CR618539|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr2_+_198088559_198088564	0.000196615	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr17_+_71772982_71773002	0.000196251	SOX2.p2	CR616618|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chrX_-_15782803_15782812	0.000172955	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr19_+_46595533_46595556	0.000167079	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626469|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr17_+_72244224_72244529	0.000162608	SOX2.p2	AF015190|MFSD11|79157|major facilitator superfamily domain containing 11	AF015186|MFSD11|79157|major facilitator superfamily domain containing 11	AF015187|MFSD11|79157|major facilitator superfamily domain containing 11
hg18_v1_chr1_-_52116965_52116988	0.000159904	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr16_+_68016063_68016067	0.000130326	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr2_+_27293737_27293779	0.000126977	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr11_+_94439703_94439929	0.000123754	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr17_+_43480723_43480723	0.000106101	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr10_-_61335967_61336090	9.54549e-05	SOX2.p2	
hg18_v1_chr5_+_159781454_159781509	8.73728e-05	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr19_+_9593136_9593217	7.85708e-05	SOX2.p2	CR598956|LOC284385|284385|hypothetical LOC284385	AK097685|LOC284385|284385|hypothetical LOC284385	BC143540|LOC284385|284385|hypothetical LOC284385
hg18_v1_chr7_-_47588652_47588771	5.66291e-05	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg18_v1_chr12_+_103904243_103904259	5.64269e-05	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr1_+_20081495_20081507	4.56111e-05	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg18_v1_chrX_+_151860870_151860900	4.54835e-05	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chr3_+_101536234_101536361	3.89396e-05	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg18_v1_chr4_-_9727598_9727670	3.6404e-05	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg18_v1_chr4_+_6768800_6768846	3.27906e-05	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	CR599774|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)	CR613059|CNO|55330|cappuccino homolog (mouse)
hg18_v1_chrX_-_41667174_41667365	2.12357e-05	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr16_+_28765510_28765565	1.7123e-05	SOX2.p2	AK055104|SH2B1|25970|SH2B adaptor protein 1
hg18_v1_chr10_-_64248932_64248932	9.37716e-06	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg18_v1_chr11_+_64646378_64646396	6.07933e-06	SOX2.p2	CR598452|MRPL49|740|mitochondrial ribosomal protein L49	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49	CR593043|MRPL49|740|mitochondrial ribosomal protein L49
hg18_v1_chr15_+_39412183_39412402	1.73771e-06	SOX2.p2	CR591711|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_001129897|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_016359|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_018454|NUSAP1|51203|nucleolar and spindle associated protein 1	AK307728|NUSAP1|51203|nucleolar and spindle associated protein 1	AK222819|NUSAP1|51203|nucleolar and spindle associated protein 1	AK290879|NUSAP1|51203|nucleolar and spindle associated protein 1	AK293168|NUSAP1|51203|nucleolar and spindle associated protein 1	BC011008|NUSAP1|51203|nucleolar and spindle associated protein 1	AF217513|NUSAP1|51203|nucleolar and spindle associated protein 1	AK225703|NUSAP1|51203|nucleolar and spindle associated protein 1	AL833611|NUSAP1|51203|nucleolar and spindle associated protein 1	AK023483|NUSAP1|51203|nucleolar and spindle associated protein 1	BC024772|NUSAP1|51203|nucleolar and spindle associated protein 1	AF090915|NUSAP1|51203|nucleolar and spindle associated protein 1	AF290612|NUSAP1|51203|nucleolar and spindle associated protein 1	BC001308|NUSAP1|51203|nucleolar and spindle associated protein 1	CR596878|NUSAP1|51203|nucleolar and spindle associated protein 1	BC012887|NUSAP1|51203|nucleolar and spindle associated protein 1
