hg18_v1_chr6_-_139654807_139654900	2.55851	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg18_v1_chr3_-_150533948_150534237	2.27015	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg18_v1_chr7_-_27186400_27186400	2.07561	SOX2.p2	NM_153715|HOXA10|3206|homeobox A10
hg18_v1_chr4_-_101658094_101658272	1.61798	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg18_v1_chr6_+_130381408_130381428	1.40494	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg18_v1_chr1_-_171441234_171441319	1.38214	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr4_+_146623405_146623412	1.34861	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg18_v1_chr4_+_86918882_86918963	1.31153	SOX2.p2	BC098580|ARHGAP24|83478|Rho GTPase activating protein 24	AK098193|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr1_+_66570363_66570520	1.27879	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr2_-_37752272_37752294	1.27751	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr1_-_197173159_197173182	1.27007	SOX2.p2	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor
hg18_v1_chr12_-_6103945_6104096	1.2141	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg18_v1_chr7_-_27180398_27180479	1.21166	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg18_v1_chr2_-_188021117_188021265	1.20638	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr13_-_98428244_98428338	1.20541	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr7_+_102340579_102340757	1.13018	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr6_+_12398514_12398644	1.1065	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	CR605456|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	CR602522|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg18_v1_chr7_+_27190688_27190810	1.08892	SOX2.p2	
hg18_v1_chrX_+_15428820_15428960	1.07059	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr21_-_38792173_38792297	1.06888	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr1_-_95165089_95165368	1.06863	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr17_-_18890963_18891070	1.06602	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	CR615744|GRAP|10750|GRB2-related adaptor protein	CR624975|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	CR600595|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein	CR595033|GRAP|10750|GRB2-related adaptor protein
hg18_v1_chr6_+_114285209_114285646	1.05043	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr9_+_18464138_18464228	1.04996	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr9_+_18464090_18464103	1.04683	SOX2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr12_-_101115677_101115743	1.04163	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg18_v1_chr7_-_27190882_27190893	1.02811	SOX2.p2	CR612696|HOXA11|3207|homeobox A11
hg18_v1_chr6_+_153060722_153060874	1.02298	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr13_-_73606362_73606432	1.02079	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr16_-_71639670_71639774	0.999545	SOX2.p2	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chrX_+_86659370_86659552	0.992281	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr1_-_95165037_95165086	0.976904	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg18_v1_chr5_+_15553736_15553760	0.975962	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr9_-_35640852_35640946	0.972615	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr5_+_15553288_15553310	0.956324	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr11_+_5667494_5667687	0.934227	SOX2.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr5_-_100266769_100266886	0.925178	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr5_-_111119846_111119846	0.924367	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr7_-_27171673_27171685	0.90779	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg18_v1_chr3_-_116272911_116272950	0.907735	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr5_+_15553539_15553549	0.887331	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr8_-_124622434_124622628	0.886553	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr10_+_22765996_22766014	0.88455	SOX2.p2	AK295718|LOC100289455|100289455|hypothetical LOC100289455
hg18_v1_chr10_+_70517863_70517960	0.86655	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr12_-_68369322_68369323	0.842811	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr9_-_116190038_116190184	0.842457	SOX2.p2	AY703041|AKNA|80709|AT-hook transcription factor	AY703042|AKNA|80709|AT-hook transcription factor	AK131082|AKNA|80709|AT-hook transcription factor	AK160382|AKNA|80709|AT-hook transcription factor	AB075848|AKNA|80709|AT-hook transcription factor
hg18_v1_chr6_-_56824371_56824452	0.837253	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chr10_+_70517823_70517861	0.834882	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr13_-_98757634_98757749	0.833256	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr15_-_80125403_80125440	0.830723	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr15_-_80125514_80125549	0.82007	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr5_-_88155360_88155499	0.815089	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr17_-_59818033_59818157	0.813761	SOX2.p2	X96849|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr7_+_93388951_93389086	0.798424	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR622777|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR596301|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR592688|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR603702|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR590486|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg18_v1_chr11_+_129496792_129496884	0.795065	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr13_-_32658215_32658215	0.794937	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr1_-_85816520_85816637	0.781887	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr2_+_108637698_108637699	0.772346	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr2_-_198248828_198249012	0.771253	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chr9_+_89302574_89302803	0.7711	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr18_+_13601664_13601664	0.763774	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr15_-_68781662_68781700	0.754631	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr13_+_110653407_110653440	0.753946	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr3_+_148593911_148593934	0.753924	SOX2.p2	
hg18_v1_chr3_+_190831909_190831998	0.75048	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr1_-_85703198_85703228	0.747101	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr2_+_108637916_108637940	0.737632	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr17_-_59817456_59817545	0.733688	SOX2.p2	AK304166|PECAM1|5175|platelet/endothelial cell adhesion molecule	DQ893644|PECAM1|5175|platelet/endothelial cell adhesion molecule	AK290692|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr3_+_182900081_182900092	0.728967	SOX2.p2	BC016393|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)
hg18_v1_chr17_-_59817722_59817742	0.726733	SOX2.p2	BC022512|PECAM1|5175|platelet/endothelial cell adhesion molecule	BC051822|PECAM1|5175|platelet/endothelial cell adhesion molecule	NM_000442|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr13_-_32678142_32678186	0.724367	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr3_-_192531018_192531018	0.720633	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr2_-_56266408_56266418	0.708914	SOX2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr17_-_59817654_59817680	0.705068	SOX2.p2	M37780|PECAM1|5175|platelet/endothelial cell adhesion molecule	M28526|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr13_-_73605914_73606066	0.705032	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr9_+_115303527_115303677	0.704536	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr6_-_56816403_56816460	0.701464	SOX2.p2	U31850|DST|667|dystonin
hg18_v1_chr10_+_80672842_80673430	0.700789	SOX2.p2	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr9_+_89302239_89302573	0.697194	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr17_-_59817575_59817633	0.696946	SOX2.p2	AF281287|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281288|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281289|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281290|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281291|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281292|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281293|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281294|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281295|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281296|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281297|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281298|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281299|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281300|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281301|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393676|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393677|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393678|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr17_+_18971506_18971506	0.687964	SOX2.p2	BC157869|GRAPL|400581|GRB2-related adaptor protein-like	NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like
hg18_v1_chr1_+_84540921_84540921	0.671877	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr2_-_110665188_110665188	0.668779	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr17_-_30783631_30783655	0.667433	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr12_-_31635089_31635281	0.659985	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr2_+_110013297_110013297	0.659314	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr4_+_37655385_37655439	0.658531	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg18_v1_chr5_+_98132898_98132985	0.652267	SOX2.p2	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr2_-_207739815_207739925	0.644151	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr15_+_37330176_37330258	0.64214	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg18_v1_chr7_+_20337249_20337270	0.64181	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr1_+_242281199_242281214	0.640095	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr6_+_21701942_21702760	0.639511	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg18_v1_chr2_-_37752731_37753056	0.639462	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr8_-_29262240_29262240	0.638761	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg18_v1_chr7_-_47588266_47588350	0.637743	SOX2.p2	AK092864|TNS3|64759|tensin 3
hg18_v1_chr6_-_56824672_56824674	0.637009	SOX2.p2	AK299898|DST|667|dystonin
hg18_v1_chr5_+_15553768_15553785	0.605975	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr7_+_134114912_134114947	0.603244	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg18_v1_chr9_+_27099138_27099146	0.598452	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr17_-_46479127_46479269	0.598207	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr5_-_156935283_156935306	0.59651	SOX2.p2	
hg18_v1_chr14_-_88953059_88953268	0.594987	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg18_v1_chr7_-_11838260_11838369	0.594395	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr8_-_33544184_33544226	0.591818	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg18_v1_chr3_-_115826481_115826488	0.587844	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr7_+_134114957_134114968	0.572607	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg18_v1_chr4_+_146622154_146622511	0.570921	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg18_v1_chrX_+_10084984_10085125	0.568696	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg18_v1_chr2_-_128138435_128138636	0.568311	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg18_v1_chr3_-_150858274_150858577	0.562691	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	CR608322|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg18_v1_chr3_-_11660395_11660398	0.562055	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr21_-_27261276_27261344	0.561952	SOX2.p2	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg18_v1_chr5_-_156935317_156935449	0.561321	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr5_+_95093267_95093318	0.560552	SOX2.p2	
hg18_v1_chr7_-_47588160_47588217	0.556755	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg18_v1_chr10_-_14686243_14686404	0.556596	SOX2.p2	CR610285|FAM107B|83641|family with sequence similarity 107, member B	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr4_-_7991992_7992584	0.548369	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg18_v1_chr7_+_139175420_139175703	0.547257	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	CR625096|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr16_+_64958025_64958043	0.544422	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr3_-_58538110_58538189	0.54308	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	CR607139|FAM107A|11170|family with sequence similarity 107, member A	CR610702|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	CR601858|FAM107A|11170|family with sequence similarity 107, member A	CR621351|FAM107A|11170|family with sequence similarity 107, member A	CR617615|FAM107A|11170|family with sequence similarity 107, member A	CR591615|FAM107A|11170|family with sequence similarity 107, member A	CR609117|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	CR600423|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr3_+_174598937_174598937	0.542824	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr3_-_58538530_58538530	0.539961	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr1_+_198975227_198975361	0.537686	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr16_+_64958060_64958063	0.536313	SOX2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr2_-_207738858_207738944	0.53108	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr6_+_89847019_89847181	0.530995	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr2_+_33213111_33213308	0.530942	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chr10_-_88707299_88707404	0.530363	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg18_v1_chrX_+_100692071_100692244	0.529493	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR616090|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg18_v1_chr4_-_140696740_140697026	0.525505	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr4_+_86918870_86918874	0.520617	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr9_+_4480193_4480681	0.519723	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg18_v1_chr8_-_6407882_6408337	0.51812	SOX2.p2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	CR620685|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg18_v1_chr16_+_64958086_64958120	0.517432	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr5_-_71838875_71839004	0.517222	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg18_v1_chr11_+_113436438_113436497	0.5144	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg18_v1_chr1_+_242283129_242283204	0.513749	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr1_+_43539239_43539329	0.513425	SOX2.p2	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg18_v1_chr19_+_13767207_13767284	0.510962	SOX2.p2	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4	NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4
hg18_v1_chr8_-_108579270_108579458	0.50889	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr5_-_111120929_111121032	0.501655	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr6_+_89847183_89847332	0.501638	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr3_+_25444837_25444905	0.50109	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr15_-_81667773_81667828	0.501004	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr6_+_44295219_44295449	0.500668	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr15_-_81667169_81667668	0.4981	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr1_-_26105954_26105954	0.498033	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr1_-_224993498_224993625	0.494898	SOX2.p2	BC015009|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B
hg18_v1_chr10_+_104525877_104526013	0.492607	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg18_v1_chr1_+_66570683_66570684	0.488821	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr3_-_115825742_115825742	0.487506	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr5_+_76418545_76418662	0.486627	SOX2.p2	CR597892|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr3_+_25444753_25444805	0.486143	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr4_+_3264509_3264607	0.485965	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr1_-_32574185_32574443	0.484961	SOX2.p2	CR602280|MARCKSL1|65108|MARCKS-like 1	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	CR593904|MARCKSL1|65108|MARCKS-like 1	CR611715|MARCKSL1|65108|MARCKS-like 1	CR611461|MARCKSL1|65108|MARCKS-like 1	CR607885|MARCKSL1|65108|MARCKS-like 1	CR625318|MARCKSL1|65108|MARCKS-like 1	CR599424|MARCKSL1|65108|MARCKS-like 1	CR608551|MARCKSL1|65108|MARCKS-like 1	CR603178|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	CR595141|MARCKSL1|65108|MARCKS-like 1	CR595693|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	CR602564|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1	CR625187|MARCKSL1|65108|MARCKS-like 1	CR590657|MARCKSL1|65108|MARCKS-like 1	CR594797|MARCKSL1|65108|MARCKS-like 1	CR596259|MARCKSL1|65108|MARCKS-like 1	CR596703|MARCKSL1|65108|MARCKS-like 1	CR596974|MARCKSL1|65108|MARCKS-like 1	CR597180|MARCKSL1|65108|MARCKS-like 1	CR599096|MARCKSL1|65108|MARCKS-like 1	CR617460|MARCKSL1|65108|MARCKS-like 1	CR621540|MARCKSL1|65108|MARCKS-like 1	CR624801|MARCKSL1|65108|MARCKS-like 1
hg18_v1_chr12_-_41164052_41164081	0.482157	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr1_-_223907283_223907538	0.480576	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr5_-_111120817_111120853	0.474308	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chrX_+_12904207_12904321	0.474027	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chrX_-_128616594_128616613	0.473649	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg18_v1_chr6_+_116939500_116939528	0.472555	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr12_-_41164010_41164041	0.472187	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chrX_+_28515479_28515601	0.47031	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg18_v1_chr11_+_111313067_111313170	0.469794	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr19_-_14121728_14121872	0.467299	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg18_v1_chr15_+_22751162_22751284	0.4648	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR591152|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR604539|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593721|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR594630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR595630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599234|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593346|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599902|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr15_-_80123935_80123941	0.464097	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr12_-_10142779_10142930	0.463878	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr13_-_20533703_20533729	0.461067	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr12_-_47869134_47869153	0.458963	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr9_+_115382990_115383028	0.457522	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr11_+_111313227_111313360	0.455909	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr14_+_76298693_76298917	0.453473	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg18_v1_chr10_-_14686413_14686457	0.45335	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr9_+_36026900_36026994	0.452436	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr13_-_22905822_22905859	0.449857	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr8_+_67201684_67202105	0.448537	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr15_-_93671314_93671332	0.447863	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr3_+_29297806_29298130	0.447352	SOX2.p2	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chr11_+_128068982_128069034	0.444744	SOX2.p2	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr5_-_111120764_111120807	0.441419	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr17_-_26672757_26672892	0.440254	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	CR590095|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg18_v1_chr5_-_111782637_111782908	0.440072	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg18_v1_chr7_-_47588652_47588771	0.439448	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg18_v1_chr5_-_95184221_95184464	0.438498	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr18_-_21186107_21186215	0.438195	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr5_+_72148173_72148320	0.437438	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr4_-_54119102_54119112	0.436291	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chrX_-_50573759_50573943	0.436171	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg18_v1_chr8_-_18710575_18710684	0.43396	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr9_-_4289574_4289593	0.433261	SOX2.p2	DQ438882|GLIS3|169792|GLIS family zinc finger 3	DQ438887|GLIS3|169792|GLIS family zinc finger 3	DQ438892|GLIS3|169792|GLIS family zinc finger 3	DQ438899|GLIS3|169792|GLIS family zinc finger 3	DQ438902|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr4_-_54119159_54119192	0.428963	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr12_-_47869067_47869133	0.427983	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr1_-_79244948_79245082	0.4257	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg18_v1_chr3_-_194118627_194118643	0.424727	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg18_v1_chr7_-_27171648_27171655	0.423099	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg18_v1_chr12_+_48443588_48443627	0.421519	SOX2.p2	CR602155|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	CR611691|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr1_-_153107084_153107166	0.421366	SOX2.p2	
hg18_v1_chr3_-_194118321_194118340	0.41988	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg18_v1_chr5_+_95092384_95092865	0.418244	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr8_-_60194099_60194353	0.418094	SOX2.p2	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box	DQ894852|TOX|9760|thymocyte selection-associated high mobility group box	AK000971|TOX|9760|thymocyte selection-associated high mobility group box	BC016665|TOX|9760|thymocyte selection-associated high mobility group box	AK302331|TOX|9760|thymocyte selection-associated high mobility group box	AB018351|TOX|9760|thymocyte selection-associated high mobility group box	NM_014729|TOX|9760|thymocyte selection-associated high mobility group box
hg18_v1_chr8_+_79591074_79591204	0.416872	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr11_+_128069165_128069178	0.416806	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr7_+_149707338_149707382	0.416399	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg18_v1_chr20_+_30061905_30061913	0.415841	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg18_v1_chr4_-_54119123_54119147	0.415637	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chrX_+_12903145_12903177	0.414175	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_183049|TMSL3|7117|thymosin-like 3	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	CR621963|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr11_+_128069183_128069198	0.413959	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chrX_-_33139349_33139593	0.410203	SOX2.p2	M63073|DMD|1756|dystrophin	M63074|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg18_v1_chr11_+_128069203_128069327	0.410173	SOX2.p2	CR600005|FLI1|2313|Friend leukemia virus integration 1	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr4_+_91035025_91035145	0.409009	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr9_+_115382760_115382760	0.404675	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr6_+_144649142_144649204	0.40396	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr7_-_27171600_27171623	0.403561	SOX2.p2	AM393527|HOXA9|3205|homeobox A9	BT006990|HOXA9|3205|homeobox A9	DQ892748|HOXA9|3205|homeobox A9	DQ895994|HOXA9|3205|homeobox A9	U82759|HOXA9|3205|homeobox A9
hg18_v1_chr19_+_39402167_39402274	0.403423	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr9_+_138341752_138341823	0.401174	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg18_v1_chr1_-_152431175_152431232	0.400776	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr15_+_61122957_61123066	0.400686	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg18_v1_chr21_+_25856311_25856375	0.400407	SOX2.p2	AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)
hg18_v1_chr7_-_107430566_107431116	0.399061	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg18_v1_chr14_+_85066207_85066246	0.399023	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr5_-_83715947_83716057	0.39842	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr13_-_20533629_20533702	0.394942	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr14_+_85066265_85066324	0.394799	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr11_-_83071084_83071115	0.393331	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr19_+_10574055_10574212	0.388835	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr3_+_44601457_44601463	0.388256	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg18_v1_chr1_+_61642287_61642335	0.387081	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chr10_+_17310475_17310610	0.386241	SOX2.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr3_-_69254226_69254435	0.382567	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg18_v1_chr14_-_75517844_75517844	0.38244	SOX2.p2	NM_003239|TGFB3|7043|transforming growth factor, beta 3
hg18_v1_chr7_+_20336849_20336875	0.376498	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg18_v1_chr19_-_17236522_17236572	0.375734	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	CR599813|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg18_v1_chr19_+_44595589_44595589	0.37506	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg18_v1_chr2_+_54537842_54537901	0.374972	SOX2.p2	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr14_+_62740878_62741014	0.371773	SOX2.p2	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	NM_020663|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg18_v1_chr5_-_171643247_171643372	0.37149	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr5_+_102229425_102229434	0.371443	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg18_v1_chr4_-_152368492_152368631	0.371269	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr11_-_85107569_85107858	0.369744	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr12_-_107745455_107745455	0.36944	SOX2.p2	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chr19_-_1518875_1519056	0.368614	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg18_v1_chr5_+_88220846_88220907	0.368532	SOX2.p2	
hg18_v1_chr6_-_33028790_33028876	0.366865	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr7_+_73341640_73341807	0.366494	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr9_+_94766379_94766403	0.365179	SOX2.p2	CR591538|FGD3|89846|FYVE, RhoGEF and PH domain containing 3
hg18_v1_chr1_+_242281175_242281183	0.360061	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr3_-_121652183_121652872	0.359056	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg18_v1_chrX_-_106846253_106846366	0.358026	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	CR600468|TSC22D3|1831|TSC22 domain family, member 3	CR622973|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr1_-_206125877_206126015	0.357629	SOX2.p2	
hg18_v1_chr15_-_76890626_76890985	0.35672	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg18_v1_chr13_-_109757442_109757578	0.356441	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr1_+_211190631_211190661	0.355396	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg18_v1_chr13_+_45174446_45174446	0.355361	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr12_+_48443232_48443347	0.3548	SOX2.p2	CR624817|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr1_+_216585298_216585370	0.354395	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr17_-_16413188_16413254	0.352475	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg18_v1_chr5_-_171643399_171643442	0.352288	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr1_+_22107137_22107137	0.351425	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr8_-_93176819_93176887	0.350945	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr4_+_141397889_141397889	0.350945	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg18_v1_chr6_-_166960690_166960726	0.350764	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr4_-_138673078_138673107	0.349289	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr9_-_72673753_72673808	0.348602	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg18_v1_chr12_+_121218218_121218218	0.348418	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg18_v1_chr8_-_38444398_38444519	0.348405	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr10_-_92671005_92671011	0.346622	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr1_+_161305558_161305898	0.344543	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr11_+_128069340_128069364	0.343886	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr18_-_24011349_24011442	0.342811	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr16_+_2023279_2023297	0.339381	SOX2.p2	CR617760|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg18_v1_chr11_+_22316242_22316242	0.337371	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr4_+_54660954_54661004	0.337223	SOX2.p2	AB028838|GSX2|170825|GS homeobox 2	EU596451|GSX2|170825|GS homeobox 2	NM_133267|GSX2|170825|GS homeobox 2
hg18_v1_chr11_-_71458739_71458785	0.336816	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr14_+_76297885_76298532	0.336233	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr4_-_176970407_176970464	0.334285	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg18_v1_chr22_-_17892859_17892893	0.332036	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5	CR626038|CLDN5|7122|claudin 5
hg18_v1_chr10_-_116434364_116434403	0.331806	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg18_v1_chr12_-_69289889_69289890	0.331214	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr19_-_46504831_46504973	0.330193	SOX2.p2	
hg18_v1_chr19_+_43089720_43089785	0.32844	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg18_v1_chr7_+_22733290_22733406	0.326918	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	CR590965|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr11_+_5667392_5667453	0.326543	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr4_-_170314382_170314407	0.325448	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr13_+_23742846_23742950	0.324479	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr19_+_44886785_44886981	0.324366	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr10_+_133850325_133850534	0.324254	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg18_v1_chr3_-_13032130_13032306	0.323469	SOX2.p2	
hg18_v1_chr18_+_71051713_71051753	0.323034	SOX2.p2	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1
hg18_v1_chr6_-_90119068_90119156	0.322852	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr2_+_37282516_37282652	0.322493	SOX2.p2	CR604989|LOC100505876|100505876|hypothetical LOC100505876
hg18_v1_chr8_-_70907957_70907957	0.321931	SOX2.p2	BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr5_+_76470829_76470856	0.321514	SOX2.p2	
hg18_v1_chr14_-_90953883_90953912	0.321358	SOX2.p2	CR606047|CCDC88C|440193|coiled-coil domain containing 88C	NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C	AF070587|CCDC88C|440193|coiled-coil domain containing 88C	CR607628|CCDC88C|440193|coiled-coil domain containing 88C
hg18_v1_chr14_-_104602809_104602828	0.320075	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr9_+_115396020_115396377	0.319477	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3	CR618862|RGS3|5998|regulator of G-protein signaling 3	BC018072|RGS3|5998|regulator of G-protein signaling 3	CR616828|RGS3|5998|regulator of G-protein signaling 3	CR605994|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr7_-_130891861_130891945	0.319466	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr2_-_189752575_189752849	0.319079	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr6_-_90119158_90119160	0.319054	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr8_+_81560971_81561107	0.318922	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg18_v1_chr19_+_1199548_1199600	0.318819	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg18_v1_chr5_-_172976196_172976210	0.317872	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr12_+_67919583_67919618	0.317607	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr10_+_97793054_97793689	0.317287	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr10_+_49184658_49184926	0.316828	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr11_-_85115105_85115158	0.315894	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr15_-_57452357_57452359	0.314273	SOX2.p2	AK291688|MYO1E|4643|myosin IE
hg18_v1_chr19_+_53664386_53664576	0.31251	SOX2.p2	CR591768|CYTH2|9266|cytohesin 2	CR623405|CYTH2|9266|cytohesin 2	AB209573|CYTH2|9266|cytohesin 2	CR591823|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	CR607678|CYTH2|9266|cytohesin 2	CR612861|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	CR611270|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	CR621270|CYTH2|9266|cytohesin 2	CR593517|CYTH2|9266|cytohesin 2	CR608279|CYTH2|9266|cytohesin 2	CR614084|CYTH2|9266|cytohesin 2	CR616768|CYTH2|9266|cytohesin 2	CR617009|CYTH2|9266|cytohesin 2	CR621404|CYTH2|9266|cytohesin 2	CR608702|CYTH2|9266|cytohesin 2	CR600368|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	CR596472|CYTH2|9266|cytohesin 2	CR598477|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg18_v1_chr2_-_1727220_1727239	0.311776	SOX2.p2	BC098579|PXDN|7837|peroxidasin homolog (Drosophila)
hg18_v1_chr8_-_70908130_70908178	0.310502	SOX2.p2	CR596526|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr15_+_64781723_64781734	0.307214	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr10_+_17311282_17311282	0.306247	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg18_v1_chr17_-_76985538_76985644	0.306125	SOX2.p2	
hg18_v1_chr2_+_85834111_85834922	0.30573	SOX2.p2	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)	AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)	BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)	AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)	BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)	AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)
hg18_v1_chr1_-_202730135_202730642	0.305581	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chrX_+_135079120_135079120	0.305215	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr1_-_177106702_177106837	0.30467	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg18_v1_chr4_+_151218862_151219088	0.304542	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg18_v1_chr22_-_37480898_37480961	0.30412	SOX2.p2	AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2	AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr2_-_164300758_164300768	0.303778	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr3_-_48576204_48576225	0.303199	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg18_v1_chr7_+_22733626_22733661	0.302975	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr9_-_4289915_4290011	0.302319	SOX2.p2	DQ438877|GLIS3|169792|GLIS family zinc finger 3	DQ438881|GLIS3|169792|GLIS family zinc finger 3	DQ438886|GLIS3|169792|GLIS family zinc finger 3	DQ438891|GLIS3|169792|GLIS family zinc finger 3	DQ438898|GLIS3|169792|GLIS family zinc finger 3	DQ438901|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chrX_-_99778340_99778503	0.302136	SOX2.p2	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr9_+_132700462_132700515	0.301828	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr2_-_74634569_74634595	0.30141	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg18_v1_chr7_-_92300573_92300833	0.299979	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr17_-_71017509_71017563	0.298442	SOX2.p2	AK300354|CASKIN2|57513|CASK interacting protein 2	NM_001142643|CASKIN2|57513|CASK interacting protein 2	AK315936|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr9_+_132700567_132700651	0.29827	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr11_+_65164767_65164895	0.298062	SOX2.p2	AK310068|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr20_-_39199936_39200109	0.297734	SOX2.p2	
hg18_v1_chr17_-_1029758_1029880	0.296992	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg18_v1_chr1_+_211190476_211190605	0.296951	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr10_+_17311307_17311331	0.29661	SOX2.p2	CR599648|VIM|7431|vimentin	CR616791|VIM|7431|vimentin	CR618218|VIM|7431|vimentin	CR623356|VIM|7431|vimentin	CR607117|VIM|7431|vimentin	Z19554|VIM|7431|vimentin	CR596331|VIM|7431|vimentin	CR621990|VIM|7431|vimentin	CR617642|VIM|7431|vimentin	CR597703|VIM|7431|vimentin	CR620841|VIM|7431|vimentin	CR617507|VIM|7431|vimentin
hg18_v1_chr15_+_65217412_65217412	0.295989	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg18_v1_chr10_+_17311242_17311281	0.294016	SOX2.p2	CR593122|VIM|7431|vimentin	CR593139|VIM|7431|vimentin	CR593157|VIM|7431|vimentin	CR595631|VIM|7431|vimentin	CR596714|VIM|7431|vimentin	CR597938|VIM|7431|vimentin	CR599707|VIM|7431|vimentin	CR601844|VIM|7431|vimentin	CR602002|VIM|7431|vimentin	CR602499|VIM|7431|vimentin	CR602711|VIM|7431|vimentin	CR604958|VIM|7431|vimentin	CR605908|VIM|7431|vimentin	CR608479|VIM|7431|vimentin	CR610054|VIM|7431|vimentin	CR611833|VIM|7431|vimentin	CR615569|VIM|7431|vimentin	CR617011|VIM|7431|vimentin	CR617845|VIM|7431|vimentin	CR618852|VIM|7431|vimentin	CR620637|VIM|7431|vimentin	CR620780|VIM|7431|vimentin	CR621379|VIM|7431|vimentin	CR624853|VIM|7431|vimentin	CR593764|VIM|7431|vimentin	CR595804|VIM|7431|vimentin	CR604328|VIM|7431|vimentin	CR604633|VIM|7431|vimentin	CR609435|VIM|7431|vimentin
hg18_v1_chr15_-_57452361_57452364	0.293372	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg18_v1_chr4_-_176970372_176970402	0.29314	SOX2.p2	DQ892372|GPM6A|2823|glycoprotein M6A	DQ895581|GPM6A|2823|glycoprotein M6A
hg18_v1_chrX_-_19727775_19727818	0.292645	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chrX_+_103243762_103243918	0.290687	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg18_v1_chrX_+_135079461_135079461	0.290117	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr3_+_179736917_179736917	0.289981	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr22_+_29420792_29420898	0.289923	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg18_v1_chr17_+_78009895_78009968	0.289846	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor	CR611448|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr10_+_17311283_17311303	0.289794	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	CR614482|VIM|7431|vimentin	CR622549|VIM|7431|vimentin	CR612980|VIM|7431|vimentin	CR590855|VIM|7431|vimentin	CR600582|VIM|7431|vimentin	CR600607|VIM|7431|vimentin	CR621958|VIM|7431|vimentin	CR622001|VIM|7431|vimentin	CR623317|VIM|7431|vimentin	CR591166|VIM|7431|vimentin	CR596422|VIM|7431|vimentin	CR601396|VIM|7431|vimentin	CR606048|VIM|7431|vimentin	CR608699|VIM|7431|vimentin	CR619643|VIM|7431|vimentin	CR622265|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	CR598442|VIM|7431|vimentin	CR620869|VIM|7431|vimentin	CR616523|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg18_v1_chr13_-_37341859_37341938	0.289447	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg18_v1_chr2_+_101874765_101874783	0.289212	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr9_+_81377289_81377399	0.288885	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr6_+_28200365_28200391	0.288772	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg18_v1_chr9_-_71476917_71477131	0.288032	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg18_v1_chr8_+_70567634_70567652	0.287964	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg18_v1_chr17_-_53335748_53335748	0.287831	SOX2.p2	AK000746|CUEDC1|404093|CUE domain containing 1	NM_017949|CUEDC1|404093|CUE domain containing 1
hg18_v1_chrX_-_31436335_31436335	0.287631	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr8_-_93184629_93184633	0.287448	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr10_+_53744043_53744200	0.285039	SOX2.p2	NM_012242|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AK314902|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR625465|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594616|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR601383|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603553|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	BC001539|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AY359005|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594190|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR595444|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603030|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR605923|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591735|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR600818|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR604811|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR610857|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF127563|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF177394|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591322|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)
hg18_v1_chr20_-_20641122_20641334	0.284412	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg18_v1_chr9_-_14303509_14303718	0.28351	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg18_v1_chr2_+_232281491_232281663	0.282841	SOX2.p2	CR592067|PTMA|5757|prothymosin, alpha	CR595284|PTMA|5757|prothymosin, alpha	CR612313|PTMA|5757|prothymosin, alpha	CR617850|PTMA|5757|prothymosin, alpha	BC098420|PTMA|5757|prothymosin, alpha	BC070480|PTMA|5757|prothymosin, alpha	CR592101|PTMA|5757|prothymosin, alpha	CR597059|PTMA|5757|prothymosin, alpha	CR599711|PTMA|5757|prothymosin, alpha	CR611351|PTMA|5757|prothymosin, alpha	CR612721|PTMA|5757|prothymosin, alpha	CR616215|PTMA|5757|prothymosin, alpha	CR623981|PTMA|5757|prothymosin, alpha	BC003510|PTMA|5757|prothymosin, alpha	BC051265|PTMA|5757|prothymosin, alpha	CR605128|PTMA|5757|prothymosin, alpha	CR626005|PTMA|5757|prothymosin, alpha	BC071879|PTMA|5757|prothymosin, alpha	BC071647|PTMA|5757|prothymosin, alpha	CR602673|PTMA|5757|prothymosin, alpha	CR599993|PTMA|5757|prothymosin, alpha	CR621770|PTMA|5757|prothymosin, alpha	M26708|PTMA|5757|prothymosin, alpha	CR623382|PTMA|5757|prothymosin, alpha	CR623715|PTMA|5757|prothymosin, alpha	CR621405|PTMA|5757|prothymosin, alpha	M14483|PTMA|5757|prothymosin, alpha	CR593816|PTMA|5757|prothymosin, alpha	CR592291|PTMA|5757|prothymosin, alpha	BC066905|PTMA|5757|prothymosin, alpha	CR601616|PTMA|5757|prothymosin, alpha	M14794|PTMA|5757|prothymosin, alpha	DQ892963|PTMA|5757|prothymosin, alpha	DQ896210|PTMA|5757|prothymosin, alpha	AF348514|PTMA|5757|prothymosin, alpha	AY169282|PTMA|5757|prothymosin, alpha	CR619087|PTMA|5757|prothymosin, alpha	CR599378|PTMA|5757|prothymosin, alpha	CR600163|PTMA|5757|prothymosin, alpha
hg18_v1_chr12_+_51730101_51730233	0.282675	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr3_-_50335113_50335284	0.282165	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	CR595904|HYAL2|8692|hyaluronoglucosaminidase 2	CR597868|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg18_v1_chr18_-_24010944_24011126	0.281386	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr5_-_39460687_39460730	0.28125	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr19_-_11166186_11166265	0.281202	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg18_v1_chr8_+_79740813_79740938	0.280719	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr12_+_62523648_62524339	0.279458	SOX2.p2	
hg18_v1_chr19_+_1220244_1220366	0.27943	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	CR613900|CIRBP|1153|cold inducible RNA binding protein	CR592824|CIRBP|1153|cold inducible RNA binding protein	CR606464|CIRBP|1153|cold inducible RNA binding protein	CR624441|CIRBP|1153|cold inducible RNA binding protein	CR593654|CIRBP|1153|cold inducible RNA binding protein	CR615208|CIRBP|1153|cold inducible RNA binding protein	CR612930|CIRBP|1153|cold inducible RNA binding protein	CR602241|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	CR613916|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	CR597422|CIRBP|1153|cold inducible RNA binding protein	CR601213|CIRBP|1153|cold inducible RNA binding protein	CR618838|CIRBP|1153|cold inducible RNA binding protein	CR625198|CIRBP|1153|cold inducible RNA binding protein	CR601118|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein	CR618584|CIRBP|1153|cold inducible RNA binding protein
hg18_v1_chr5_-_141318810_141318810	0.279351	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr6_-_128883125_128883574	0.278246	SOX2.p2	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K
hg18_v1_chr7_+_55400890_55401255	0.277702	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr2_-_183095308_183095751	0.277673	SOX2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr13_-_28190961_28191149	0.276513	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chr14_-_104602784_104602803	0.275586	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr3_+_120496180_120496440	0.275473	SOX2.p2	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31	BC112163|ARHGAP31|57514|Rho GTPase activating protein 31	BC112165|ARHGAP31|57514|Rho GTPase activating protein 31
hg18_v1_chrX_-_74062005_74062044	0.274521	SOX2.p2	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg18_v1_chr12_+_9033403_9033498	0.274451	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg18_v1_chr1_+_33494745_33494760	0.274019	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr5_+_149845503_149845761	0.272963	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg18_v1_chr19_+_53664276_53664384	0.271299	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2	CR599552|CYTH2|9266|cytohesin 2
hg18_v1_chr5_-_158459276_158459365	0.270961	SOX2.p2	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr7_+_44754978_44755054	0.27001	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr14_-_89155078_89155619	0.269595	SOX2.p2	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg18_v1_chr1_+_85819004_85819256	0.269061	SOX2.p2	CR622169|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR593662|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR597890|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623495|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623693|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR603266|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR595937|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg18_v1_chr8_-_110415448_110415646	0.268718	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr20_+_19818209_19818245	0.267611	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr2_+_143603439_143603483	0.267344	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr22_+_34107087_34107166	0.26501	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	CR611539|HMOX1|3162|heme oxygenase (decycling) 1	CR612068|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	CR617367|HMOX1|3162|heme oxygenase (decycling) 1	CR590034|HMOX1|3162|heme oxygenase (decycling) 1	CR595835|HMOX1|3162|heme oxygenase (decycling) 1	CR598003|HMOX1|3162|heme oxygenase (decycling) 1	CR600636|HMOX1|3162|heme oxygenase (decycling) 1	CR601640|HMOX1|3162|heme oxygenase (decycling) 1	CR605543|HMOX1|3162|heme oxygenase (decycling) 1	CR611293|HMOX1|3162|heme oxygenase (decycling) 1	CR612044|HMOX1|3162|heme oxygenase (decycling) 1	CR615878|HMOX1|3162|heme oxygenase (decycling) 1	CR615893|HMOX1|3162|heme oxygenase (decycling) 1	CR617513|HMOX1|3162|heme oxygenase (decycling) 1	CR622130|HMOX1|3162|heme oxygenase (decycling) 1	CR623799|HMOX1|3162|heme oxygenase (decycling) 1	CR625550|HMOX1|3162|heme oxygenase (decycling) 1	CR626132|HMOX1|3162|heme oxygenase (decycling) 1	CR592402|HMOX1|3162|heme oxygenase (decycling) 1	CR596243|HMOX1|3162|heme oxygenase (decycling) 1	CR615425|HMOX1|3162|heme oxygenase (decycling) 1	CR615434|HMOX1|3162|heme oxygenase (decycling) 1	CR623238|HMOX1|3162|heme oxygenase (decycling) 1	CR594865|HMOX1|3162|heme oxygenase (decycling) 1	CR624289|HMOX1|3162|heme oxygenase (decycling) 1	CR615696|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chrX_-_103060777_103060803	0.264995	SOX2.p2	AK026512|LOC100128594|100128594|hypothetical LOC100128594
hg18_v1_chr15_-_43458247_43458271	0.264323	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr7_-_92301147_92301166	0.264153	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr11_-_72057755_72057755	0.263692	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg18_v1_chr11_+_112337491_112337543	0.263646	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1	EU832805|NCAM1|4684|neural cell adhesion molecule 1	GQ129418|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr15_+_29406335_29406925	0.263556	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg18_v1_chr8_+_70567581_70567605	0.262735	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr13_+_75108450_75108493	0.262693	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg18_v1_chr15_+_72397934_72397983	0.262303	SOX2.p2	AK290709|CCDC33|80125|coiled-coil domain containing 33	AK310852|CCDC33|80125|coiled-coil domain containing 33	AK026821|CCDC33|80125|coiled-coil domain containing 33	NM_182791|CCDC33|80125|coiled-coil domain containing 33	BC025689|CCDC33|80125|coiled-coil domain containing 33
hg18_v1_chr5_+_61910318_61910473	0.262302	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg18_v1_chr8_-_93176618_93176665	0.261795	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr17_+_78009819_78009890	0.261609	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	CR598397|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	CR590238|NARF|26502|nuclear prelamin A recognition factor	CR606462|NARF|26502|nuclear prelamin A recognition factor	CR595982|NARF|26502|nuclear prelamin A recognition factor	CR620704|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor	CR603660|NARF|26502|nuclear prelamin A recognition factor	CR597828|NARF|26502|nuclear prelamin A recognition factor	CR612983|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr8_-_38444675_38444848	0.261565	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr18_-_51406359_51406477	0.261536	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg18_v1_chr10_+_170423_170423	0.261474	SOX2.p2	NM_001161482|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg18_v1_chr5_-_76418661_76418937	0.260575	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg18_v1_chr5_-_121441910_121441958	0.260467	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr14_+_105012106_105012244	0.260323	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	CR612651|CRIP2|1397|cysteine-rich protein 2	CR621315|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	CR602967|CRIP2|1397|cysteine-rich protein 2	CR610735|CRIP2|1397|cysteine-rich protein 2	CR616587|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	CR617600|CRIP2|1397|cysteine-rich protein 2	CR624241|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg18_v1_chr14_-_88090641_88091251	0.259762	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr2_+_198377561_198377670	0.259438	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr11_-_71429747_71429836	0.259079	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr9_-_122516399_122516678	0.258476	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg18_v1_chr4_-_165523856_165523856	0.258069	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr8_-_87824996_87825060	0.258062	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg18_v1_chr9_+_112470871_112471004	0.257009	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr13_-_74799898_74799949	0.25635	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr4_-_111777956_111777956	0.256184	SOX2.p2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2	U69961|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr14_+_74299748_74299822	0.255749	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg18_v1_chr4_+_160408447_160408447	0.25537	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chr2_-_225519974_225520022	0.255217	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr17_+_24598000_24598007	0.254873	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1
hg18_v1_chr2_-_133145539_133145621	0.253697	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr11_-_128217550_128217626	0.25164	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg18_v1_chr6_+_121798443_121798605	0.25133	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg18_v1_chrX_+_118598325_118598325	0.251216	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr18_-_51406841_51406859	0.25114	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr10_+_123913094_123913348	0.250363	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr18_+_19848749_19848760	0.250347	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg18_v1_chr22_+_34107051_34107086	0.249971	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	CR623301|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	CR603909|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chrX_-_19727828_19727839	0.24974	SOX2.p2	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr17_-_44006808_44006847	0.249485	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr8_+_110415725_110415813	0.249162	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr2_+_36436873_36436939	0.248366	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg18_v1_chr12_+_67919619_67919693	0.247292	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr15_-_75259714_75259853	0.247244	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr10_-_92670764_92670828	0.24717	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr8_+_79590890_79590890	0.246202	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr5_+_177564140_177564216	0.245965	SOX2.p2	AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR591328|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610440|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610544|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR616453|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619752|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR620427|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR617383|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR606019|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR607074|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR590133|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610666|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR608100|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619932|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR623272|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR602810|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR609806|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619967|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B
hg18_v1_chr15_+_64372686_64372713	0.245746	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr4_-_176970895_176970905	0.244045	SOX2.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg18_v1_chr1_+_162795538_162795683	0.243668	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg18_v1_chr4_-_138673014_138673070	0.243036	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg18_v1_chr12_+_62524778_62524849	0.242905	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr10_+_97505398_97505662	0.242465	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr17_-_20886680_20887049	0.242319	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg18_v1_chr17_+_8154280_8154325	0.242016	SOX2.p2	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr13_+_112704077_112704224	0.241687	SOX2.p2	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg18_v1_chr2_+_232281470_232281487	0.240865	SOX2.p2	CR612758|PTMA|5757|prothymosin, alpha	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	CR594103|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg18_v1_chr14_+_56927014_56927058	0.240629	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr13_-_31900218_31900499	0.240581	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg18_v1_chr6_-_90119169_90119300	0.239526	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chrX_+_11687655_11687681	0.239189	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr8_+_10567556_10567580	0.239006	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74
hg18_v1_chr14_-_93493519_93493519	0.238403	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg18_v1_chr9_-_122728993_122728993	0.2381	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr15_+_72694387_72694387	0.237869	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg18_v1_chr2_+_143603368_143603433	0.237354	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr1_-_155834357_155834493	0.237265	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr9_-_14303899_14303907	0.236995	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg18_v1_chr16_-_69876262_69876360	0.236929	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg18_v1_chr4_+_159909658_159909813	0.235909	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr12_-_91063441_91063803	0.235722	SOX2.p2	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr8_-_72436519_72436560	0.235477	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr5_-_149772563_149772724	0.235354	SOX2.p2	CR590167|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr9_+_81377419_81377592	0.235083	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr15_-_38420414_38420459	0.235002	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg18_v1_chr7_+_149200937_149201013	0.234798	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg18_v1_chr5_-_83716346_83716494	0.234016	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr11_+_65164963_65164995	0.233978	SOX2.p2	
hg18_v1_chr5_-_121441866_121441878	0.233631	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg18_v1_chr12_+_47498778_47498966	0.233379	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	BC041811|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	AK289709|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76555|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	U07139|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76556|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	L27584|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg18_v1_chr12_+_91620749_91620749	0.232273	SOX2.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg18_v1_chr1_+_39647762_39647762	0.232119	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chr4_+_159909626_159909631	0.23112	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr9_-_36390817_36390977	0.230993	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg18_v1_chr2_-_63518589_63518644	0.230717	SOX2.p2	BC093752|WDPCP|51057|WD repeat containing planar cell polarity effector	BC093754|WDPCP|51057|WD repeat containing planar cell polarity effector	BC143426|WDPCP|51057|WD repeat containing planar cell polarity effector	NM_001042692|WDPCP|51057|WD repeat containing planar cell polarity effector	AF131737|WDPCP|51057|WD repeat containing planar cell polarity effector
hg18_v1_chr14_-_22358752_22358853	0.229676	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR617040|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR605487|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR601579|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
hg18_v1_chr5_-_121441805_121441860	0.229428	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg18_v1_chr10_-_725522_725861	0.228712	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg18_v1_chr20_-_44151971_44152065	0.228707	SOX2.p2	NM_020967|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr17_+_64922420_64922522	0.227891	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR616398|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR624804|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR625265|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR604345|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr15_-_43280664_43280664	0.227717	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr19_-_40939756_40939798	0.226523	SOX2.p2	CR603021|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR607202|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR618274|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg18_v1_chr8_+_40130143_40130362	0.226467	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	CR594872|C8orf4|56892|chromosome 8 open reading frame 4	CR620271|C8orf4|56892|chromosome 8 open reading frame 4	CR622918|C8orf4|56892|chromosome 8 open reading frame 4	CR600720|C8orf4|56892|chromosome 8 open reading frame 4	CR616793|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4	CR602517|C8orf4|56892|chromosome 8 open reading frame 4	CR618129|C8orf4|56892|chromosome 8 open reading frame 4	CR607025|C8orf4|56892|chromosome 8 open reading frame 4
hg18_v1_chr1_-_200380321_200380473	0.225798	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr3_-_15348811_15349080	0.224909	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr1_-_199742841_199742863	0.224711	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr4_-_111777651_111777678	0.223627	SOX2.p2	CR605855|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr8_+_26491838_26491851	0.223623	SOX2.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chrX_-_47815944_47815944	0.223446	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chrX_-_80344096_80344096	0.222996	SOX2.p2	AK094058|HMGN5|79366|high-mobility group nucleosome binding domain 5	NM_030763|HMGN5|79366|high-mobility group nucleosome binding domain 5
hg18_v1_chr10_+_102749222_102749254	0.222148	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr10_+_6284845_6284919	0.22183	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg18_v1_chr3_-_14964861_14964934	0.221825	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr5_-_150501393_150501408	0.221748	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg18_v1_chr12_-_38300109_38300109	0.221429	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr8_+_26491507_26491687	0.22129	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr1_-_199742871_199743009	0.221273	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr7_-_76667045_76667100	0.221103	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr1_+_194887630_194887870	0.220947	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr1_+_78888064_78888120	0.220928	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr4_+_78297418_78297550	0.220676	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg18_v1_chr14_+_56927066_56927105	0.220395	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr5_-_95184121_95184197	0.219776	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	CR618562|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)	CR611519|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr4_+_40953698_40953761	0.219234	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623179|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598723|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609313|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610620|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR614782|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR616949|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623929|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR591761|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR619178|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610215|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR613951|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR596405|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598599|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR600224|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR624065|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR626014|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR595667|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609753|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610993|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr7_+_150321771_150321824	0.219109	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr7_+_28692122_28692294	0.218892	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr7_+_2638108_2638150	0.218526	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr20_-_44151952_44151969	0.218365	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr5_+_112101454_112101490	0.21767	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr7_+_5598964_5598967	0.21733	SOX2.p2	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr4_-_52578542_52578542	0.217112	SOX2.p2	CR749811|LRRC66|339977|leucine rich repeat containing 66	NM_001024611|LRRC66|339977|leucine rich repeat containing 66
hg18_v1_chr9_+_115678365_115678476	0.216678	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr8_-_80842452_80842652	0.216339	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr1_+_109827975_109828164	0.215989	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg18_v1_chr12_+_48047428_48047895	0.215285	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr19_-_45016587_45016689	0.214444	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg18_v1_chr3_+_192529567_192530154	0.214372	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr4_-_170428768_170428823	0.214181	SOX2.p2	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr16_-_30993004_30993141	0.213877	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg18_v1_chr3_+_156280129_156280157	0.213294	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr3_-_127303080_127303089	0.21282	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr6_+_21774624_21774653	0.211991	SOX2.p2	AK300802|FLJ22536|401237|hypothetical locus LOC401237	AK026189|FLJ22536|401237|hypothetical locus LOC401237
hg18_v1_chr8_-_42817604_42817632	0.211222	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg18_v1_chr1_-_241485298_241485330	0.211025	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr7_+_106292975_106293045	0.210898	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr1_+_161305188_161305387	0.210838	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr12_+_12829807_12829881	0.210703	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr21_+_29439768_29439794	0.21069	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg18_v1_chr4_+_41235077_41235091	0.210455	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr4_+_53938488_53938565	0.21036	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr9_-_74169649_74170191	0.210341	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr7_-_92615593_92615620	0.209866	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr12_-_7739591_7739655	0.209847	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr14_-_34252695_34252784	0.20957	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr12_+_79362256_79362256	0.209453	SOX2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr11_-_88864061_88864380	0.209191	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg18_v1_chr22_-_40666168_40666168	0.208993	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg18_v1_chr7_+_106292932_106292967	0.208922	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr14_+_22059174_22059204	0.207965	SOX2.p2	
hg18_v1_chr1_+_201363458_201363483	0.20786	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg18_v1_chrX_+_99786044_99786058	0.20786	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr7_-_21951946_21952068	0.206443	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr21_-_45118026_45118036	0.206176	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg18_v1_chr5_-_111121150_111121364	0.205796	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr5_-_39461054_39461095	0.20571	SOX2.p2	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr19_+_702108_702151	0.204954	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg18_v1_chr4_+_3341521_3341521	0.204778	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr9_-_32540818_32540908	0.204608	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr17_+_39654808_39654935	0.20451	SOX2.p2	
hg18_v1_chr9_-_74169445_74169645	0.204357	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr17_+_27838821_27838926	0.203639	SOX2.p2	
hg18_v1_chr15_+_45797977_45797977	0.203396	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg18_v1_chr12_+_94135645_94136005	0.203034	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr6_-_111995213_111995213	0.202948	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg18_v1_chr4_+_41234944_41234981	0.202563	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr9_+_5500544_5500783	0.202528	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr2_+_237143118_237143220	0.202349	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7	CR616388|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg18_v1_chr5_-_39460787_39460855	0.201986	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr19_+_1200882_1200886	0.201897	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chr19_+_49147219_49147236	0.201378	SOX2.p2	AK314207|ZNF221|7638|zinc finger protein 221	AF187987|ZNF221|7638|zinc finger protein 221	NM_013359|ZNF221|7638|zinc finger protein 221
hg18_v1_chrX_+_99785818_99785959	0.201293	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr12_+_32151351_32151530	0.200496	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr9_-_90983501_90983559	0.199443	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chrX_+_55951280_55951389	0.199301	SOX2.p2	
hg18_v1_chr12_+_108452117_108452171	0.199111	SOX2.p2	AK304678|UBE3B|89910|ubiquitin protein ligase E3B
hg18_v1_chr16_+_30993223_30993247	0.19862	SOX2.p2	NM_014699|ZNF646|9726|zinc finger protein 646	AK304808|ZNF646|9726|zinc finger protein 646
hg18_v1_chrX_-_100759562_100759646	0.198369	SOX2.p2	CR599653|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR624030|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR598648|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR614615|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR591698|ARMCX6|54470|armadillo repeat containing, X-linked 6	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg18_v1_chr2_-_192419896_192420071	0.198259	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chr10_+_91164418_91164519	0.197886	SOX2.p2	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	CR624828|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg18_v1_chr4_+_110968594_110968607	0.197764	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr3_+_187917791_187918024	0.197746	SOX2.p2	NM_000893|KNG1|3827|kininogen 1	NM_001102416|KNG1|3827|kininogen 1	NM_001166451|KNG1|3827|kininogen 1	AK303768|KNG1|3827|kininogen 1	CR606410|KNG1|3827|kininogen 1	CR590668|KNG1|3827|kininogen 1	AK298440|KNG1|3827|kininogen 1	AK315230|KNG1|3827|kininogen 1	CR590667|KNG1|3827|kininogen 1	CR607387|KNG1|3827|kininogen 1	AK290839|KNG1|3827|kininogen 1	BC060039|KNG1|3827|kininogen 1	CR591010|KNG1|3827|kininogen 1	K02566|KNG1|3827|kininogen 1	BC026253|KNG1|3827|kininogen 1
hg18_v1_chrX_+_15435351_15435351	0.197209	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr6_-_79732391_79732552	0.197147	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr5_-_160211623_160211796	0.197024	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr4_-_170428681_170428684	0.196818	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr5_-_149772528_149772551	0.196399	SOX2.p2	
hg18_v1_chr9_-_36390212_36390295	0.196341	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr2_+_108751033_108751198	0.196203	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr18_+_18969724_18969724	0.196039	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg18_v1_chr8_-_93144039_93144111	0.195959	SOX2.p2	
hg18_v1_chr14_-_46882144_46882187	0.195837	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr8_+_9949207_9949371	0.195339	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg18_v1_chr11_+_72696963_72697141	0.19509	SOX2.p2	AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr10_+_94584449_94584449	0.194579	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr5_+_140871107_140871323	0.194506	SOX2.p2	
hg18_v1_chr11_+_112337411_112337422	0.194419	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr2_-_175578156_175578415	0.193886	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1
hg18_v1_chr1_+_238321794_238321807	0.193876	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg18_v1_chr5_-_33927724_33927880	0.193875	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr15_-_97607108_97607350	0.193638	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr2_+_71059082_71059089	0.193257	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53	CR604385|ANKRD53|79998|ankyrin repeat domain 53
hg18_v1_chr4_-_170428564_170428680	0.193054	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr2_-_136590210_136590327	0.193053	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg18_v1_chr3_+_20056527_20056527	0.192847	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr1_+_149395728_149395781	0.192386	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chr1_-_171286634_171286725	0.19234	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg18_v1_chrX_-_138742050_138742112	0.192062	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr5_-_149772469_149772526	0.192005	SOX2.p2	CR615386|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621994|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR595353|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR625117|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR622356|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR608107|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621213|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR601246|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR619151|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr3_-_101077605_101077757	0.191778	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr4_+_53938579_53938585	0.190803	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr12_-_44644216_44644239	0.190616	SOX2.p2	
hg18_v1_chr9_-_8723893_8723945	0.19051	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr4_+_78298326_78298709	0.190391	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr22_-_20419975_20420122	0.190243	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr9_-_129557373_129557403	0.189793	SOX2.p2	AK291393|SH2D3C|10044|SH2 domain containing 3C	NM_001142534|SH2D3C|10044|SH2 domain containing 3C	AK056068|SH2D3C|10044|SH2 domain containing 3C	NM_001142533|SH2D3C|10044|SH2 domain containing 3C
hg18_v1_chr8_-_72437020_72437039	0.189132	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr8_+_21980315_21980332	0.188151	SOX2.p2	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)
hg18_v1_chr9_+_96807107_96807126	0.187922	SOX2.p2	CR626738|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr14_+_64040979_64041044	0.187166	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr3_+_156280338_156280398	0.18706	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr4_+_53938567_53938578	0.18608	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr16_-_66535923_66535968	0.186041	SOX2.p2	AK310027|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4
hg18_v1_chr1_-_24112345_24112438	0.185632	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg18_v1_chr7_-_115458064_115458112	0.185457	SOX2.p2	CR933605|TFEC|22797|transcription factor EC
hg18_v1_chr5_+_92944680_92944798	0.1854	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr17_-_64649608_64649732	0.184532	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg18_v1_chr22_+_29333069_29333351	0.184143	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	CR604069|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II	CR590469|TCN2|6948|transcobalamin II
hg18_v1_chr20_-_44151924_44151938	0.183822	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr3_-_130373241_130373306	0.18366	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR596443|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR597317|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR606309|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR610184|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR614312|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR626515|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg18_v1_chr6_-_33862690_33862696	0.183479	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg18_v1_chr6_-_112682573_112682604	0.183271	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg18_v1_chr13_-_29067795_29067846	0.182749	SOX2.p2	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr10_-_13789628_13789762	0.182738	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr10_-_98326435_98326563	0.182648	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr1_-_154318412_154318433	0.182164	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg18_v1_chr1_-_36589744_36589778	0.181906	SOX2.p2	
hg18_v1_chr7_+_2638156_2638303	0.181843	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr17_-_7238546_7238612	0.181556	SOX2.p2	CR604817|PLSCR3|57048|phospholipid scramblase 3	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	CR622721|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	CR600989|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	CR621218|PLSCR3|57048|phospholipid scramblase 3	CR600673|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg18_v1_chr1_-_68470585_68470905	0.181351	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	CR624611|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg18_v1_chr1_-_200380477_200380489	0.181103	SOX2.p2	CR597275|ARL8A|127829|ADP-ribosylation factor-like 8A	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr8_-_82557956_82558030	0.180967	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg18_v1_chr16_+_30993252_30993279	0.180889	SOX2.p2	BC035589|ZNF646|9726|zinc finger protein 646
hg18_v1_chr4_-_40631397_40631473	0.180074	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr17_+_27838665_27838756	0.179607	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg18_v1_chrX_+_80344253_80344355	0.179595	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR615098|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR620035|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR595122|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR599092|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR593159|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR606366|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr10_+_102749597_102749676	0.179143	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr4_-_113656762_113656786	0.178924	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chrX_-_49852397_49852403	0.178705	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg18_v1_chr12_+_68265714_68265919	0.178364	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr6_-_71069347_71069571	0.178193	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg18_v1_chr15_-_38188333_38188441	0.177986	SOX2.p2	BC060783|BMF|90427|Bcl2 modifying factor	BC070043|BMF|90427|Bcl2 modifying factor	NM_001003940|BMF|90427|Bcl2 modifying factor
hg18_v1_chr10_-_98315090_98315173	0.177921	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr1_-_206484258_206484287	0.177914	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr17_-_44026321_44026411	0.177881	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg18_v1_chr7_+_18501876_18501973	0.177863	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg18_v1_chr1_+_9634368_9634415	0.176693	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg18_v1_chr5_+_34692124_34692216	0.176032	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg18_v1_chr4_-_118226119_118226183	0.175649	SOX2.p2	CR596564|TRAM1L1|133022|translocation associated membrane protein 1-like 1	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1	BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1	NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1
hg18_v1_chrX_+_96025562_96025691	0.175597	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg18_v1_chr8_-_120033240_120033563	0.175561	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr9_-_36391149_36391201	0.175559	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg18_v1_chr15_-_31147376_31147679	0.175108	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg18_v1_chr17_-_4216359_4216561	0.175054	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR622319|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr10_-_61819493_61819493	0.174801	SOX2.p2	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr1_+_149299307_149299485	0.1744	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR599332|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr17_+_65009986_65010164	0.174018	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr9_-_14388981_14388981	0.173939	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr13_-_38510246_38510261	0.173308	SOX2.p2	NM_025138|C13orf23|80209|chromosome 13 open reading frame 23	NM_170719|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr14_+_99329198_99329716	0.172958	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg18_v1_chr20_-_1420168_1420232	0.172694	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chrX_+_149364377_149364504	0.172664	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg18_v1_chr11_-_92570626_92570645	0.17185	SOX2.p2	
hg18_v1_chrX_+_80344215_80344251	0.171543	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR590536|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR599935|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR591928|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr1_+_15957832_15957896	0.170962	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1	CR604326|FBLIM1|54751|filamin binding LIM protein 1
hg18_v1_chr11_+_112337299_112337384	0.170831	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr9_+_66197108_66197135	0.170744	SOX2.p2	
hg18_v1_chr12_+_68265535_68265553	0.16995	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr4_+_40953666_40953685	0.169268	SOX2.p2	CR605906|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr13_-_38510183_38510220	0.169193	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr1_+_151498802_151498802	0.169107	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr6_-_76259976_76260217	0.168852	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr16_-_1772572_1772576	0.168841	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr9_-_16717887_16717908	0.168765	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg18_v1_chr5_+_94752803_94752819	0.168637	SOX2.p2	BC034772|FAM81B|153643|family with sequence similarity 81, member B	NM_152548|FAM81B|153643|family with sequence similarity 81, member B	AK058062|FAM81B|153643|family with sequence similarity 81, member B
hg18_v1_chr3_-_65999548_65999558	0.168375	SOX2.p2	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg18_v1_chr5_-_99898788_99898849	0.168213	SOX2.p2	
hg18_v1_chr14_+_87541220_87541286	0.168056	SOX2.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg18_v1_chr9_-_135847106_135847429	0.167775	SOX2.p2	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor	S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor
hg18_v1_chr6_-_32299757_32299821	0.167767	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg18_v1_chr6_-_46401363_46401489	0.167738	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2	NM_005822|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr1_+_176577228_176577286	0.167679	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg18_v1_chr1_+_182040837_182040991	0.167674	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr7_+_23603495_23603585	0.167635	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr16_+_28993770_28993843	0.167319	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg18_v1_chr22_-_43272100_43272206	0.167298	SOX2.p2	CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr17_+_55854636_55854687	0.16691	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg18_v1_chr12_-_61283474_61283480	0.166902	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg18_v1_chr4_+_78297356_78297415	0.166781	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg18_v1_chr12_-_105165805_105166150	0.166409	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr3_+_44665220_44665280	0.16609	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg18_v1_chr21_-_30836051_30836053	0.165976	SOX2.p2	AB096947|KRTAP19-6|337973|keratin associated protein 19-6	AB096948|KRTAP19-6|337973|keratin associated protein 19-6	NM_181612|KRTAP19-6|337973|keratin associated protein 19-6	BC101813|KRTAP19-6|337973|keratin associated protein 19-6	BC101815|KRTAP19-6|337973|keratin associated protein 19-6
hg18_v1_chr16_+_30314276_30314347	0.165592	SOX2.p2	
hg18_v1_chrX_-_2857315_2857348	0.1654	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg18_v1_chrX_+_51653348_51653538	0.165282	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg18_v1_chr10_+_91164283_91164364	0.165002	SOX2.p2	NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg18_v1_chr1_+_154120170_154120225	0.164937	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr2_-_242205556_242205588	0.164695	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr10_-_30356344_30356531	0.164206	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg18_v1_chr6_+_10663934_10663934	0.164118	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr16_-_4836198_4836211	0.164012	SOX2.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg18_v1_chr20_-_1420126_1420142	0.163815	SOX2.p2	AK297072|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr8_-_38445272_38445345	0.163429	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr12_-_56159631_56159692	0.163343	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr8_-_38444982_38445229	0.163013	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr7_-_26198673_26198679	0.162852	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr1_-_110085182_110085182	0.162771	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg18_v1_chr12_-_25041639_25041719	0.162368	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr20_+_39199263_39199290	0.16218	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg18_v1_chr8_-_93177057_93177057	0.161807	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr13_+_57103789_57103789	0.161417	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr4_+_40953652_40953654	0.160841	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr10_-_13429397_13429798	0.16069	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr1_-_3556420_3556530	0.160448	SOX2.p2	CR626114|WDR8|49856|WD repeat domain 8	CR619231|WDR8|49856|WD repeat domain 8	CR605005|WDR8|49856|WD repeat domain 8	AB034912|WDR8|49856|WD repeat domain 8	CR597189|WDR8|49856|WD repeat domain 8	AK000437|WDR8|49856|WD repeat domain 8	AK225525|WDR8|49856|WD repeat domain 8	BC002611|WDR8|49856|WD repeat domain 8	BC086311|WDR8|49856|WD repeat domain 8	CR613845|WDR8|49856|WD repeat domain 8	CR599166|WDR8|49856|WD repeat domain 8	CR596816|WDR8|49856|WD repeat domain 8	AK302397|WDR8|49856|WD repeat domain 8	NM_017818|WDR8|49856|WD repeat domain 8
hg18_v1_chr12_+_68265469_68265519	0.160099	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR616195|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR599514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR606401|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR615034|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR618455|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR621324|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr17_+_71095733_71095807	0.159922	SOX2.p2	AF418286|MYO15B|80022|myosin XVB pseudogene	AF418287|MYO15B|80022|myosin XVB pseudogene	AF418288|MYO15B|80022|myosin XVB pseudogene	AF418289|MYO15B|80022|myosin XVB pseudogene	AF418290|MYO15B|80022|myosin XVB pseudogene	AF418291|MYO15B|80022|myosin XVB pseudogene
hg18_v1_chr11_-_76059435_76059480	0.159272	SOX2.p2	BC052210|LRRC32|2615|leucine rich repeat containing 32	BC070079|LRRC32|2615|leucine rich repeat containing 32	NM_001128922|LRRC32|2615|leucine rich repeat containing 32
hg18_v1_chr10_-_104943000_104943074	0.159181	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr20_-_17459973_17460012	0.158761	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg18_v1_chr17_-_45427565_45427589	0.158198	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg18_v1_chr3_-_69212192_69212234	0.158178	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr19_+_20897898_20897967	0.158067	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85	CR604668|ZNF85|7639|zinc finger protein 85
hg18_v1_chr5_-_33928049_33928055	0.158048	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr12_-_49763566_49763715	0.157846	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr2_-_192420168_192420265	0.157761	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr3_-_87122958_87122962	0.157508	SOX2.p2	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr1_-_3437834_3437871	0.157299	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg18_v1_chr4_+_87070449_87070449	0.157253	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr5_+_140747586_140747635	0.157092	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg18_v1_chr16_+_88517187_88517331	0.156844	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3	CR598025|TUBB3|10381|tubulin, beta 3	CR601978|TUBB3|10381|tubulin, beta 3	AK314616|TUBB3|10381|tubulin, beta 3	AK058140|TUBB3|10381|tubulin, beta 3	AK223039|TUBB3|10381|tubulin, beta 3	AK307201|TUBB3|10381|tubulin, beta 3	CR591503|TUBB3|10381|tubulin, beta 3	CR590075|TUBB3|10381|tubulin, beta 3	CR592610|TUBB3|10381|tubulin, beta 3	CR595964|TUBB3|10381|tubulin, beta 3	CR598043|TUBB3|10381|tubulin, beta 3	CR600906|TUBB3|10381|tubulin, beta 3	CR614385|TUBB3|10381|tubulin, beta 3	BC000748|TUBB3|10381|tubulin, beta 3	BC003021|TUBB3|10381|tubulin, beta 3	CR590351|TUBB3|10381|tubulin, beta 3	CR592791|TUBB3|10381|tubulin, beta 3	CR597505|TUBB3|10381|tubulin, beta 3	CR599272|TUBB3|10381|tubulin, beta 3	CR604020|TUBB3|10381|tubulin, beta 3	CR604723|TUBB3|10381|tubulin, beta 3	CR605372|TUBB3|10381|tubulin, beta 3	CR607915|TUBB3|10381|tubulin, beta 3	CR611692|TUBB3|10381|tubulin, beta 3	CR612113|TUBB3|10381|tubulin, beta 3	CR618719|TUBB3|10381|tubulin, beta 3	CR619366|TUBB3|10381|tubulin, beta 3	CR619439|TUBB3|10381|tubulin, beta 3	CR621602|TUBB3|10381|tubulin, beta 3	CR592245|TUBB3|10381|tubulin, beta 3	CR594431|TUBB3|10381|tubulin, beta 3	CR601082|TUBB3|10381|tubulin, beta 3	CR601754|TUBB3|10381|tubulin, beta 3	CR605618|TUBB3|10381|tubulin, beta 3	CR607807|TUBB3|10381|tubulin, beta 3	CR613956|TUBB3|10381|tubulin, beta 3	CR614638|TUBB3|10381|tubulin, beta 3	CR615850|TUBB3|10381|tubulin, beta 3	CR617597|TUBB3|10381|tubulin, beta 3	CR618148|TUBB3|10381|tubulin, beta 3	CR620404|TUBB3|10381|tubulin, beta 3	CR622595|TUBB3|10381|tubulin, beta 3	CR622839|TUBB3|10381|tubulin, beta 3	CR625315|TUBB3|10381|tubulin, beta 3	CR595448|TUBB3|10381|tubulin, beta 3	CR609285|TUBB3|10381|tubulin, beta 3	CR623719|TUBB3|10381|tubulin, beta 3	CR594636|TUBB3|10381|tubulin, beta 3	CR603943|TUBB3|10381|tubulin, beta 3	CR604865|TUBB3|10381|tubulin, beta 3	CR605315|TUBB3|10381|tubulin, beta 3	CR608519|TUBB3|10381|tubulin, beta 3	CR609873|TUBB3|10381|tubulin, beta 3	CR609931|TUBB3|10381|tubulin, beta 3	CR610428|TUBB3|10381|tubulin, beta 3	CR610920|TUBB3|10381|tubulin, beta 3	CR613333|TUBB3|10381|tubulin, beta 3	CR615967|TUBB3|10381|tubulin, beta 3	CR617704|TUBB3|10381|tubulin, beta 3	CR625137|TUBB3|10381|tubulin, beta 3	CR590783|TUBB3|10381|tubulin, beta 3	CR596446|TUBB3|10381|tubulin, beta 3	CR604211|TUBB3|10381|tubulin, beta 3	CR604583|TUBB3|10381|tubulin, beta 3	CR605022|TUBB3|10381|tubulin, beta 3	CR613212|TUBB3|10381|tubulin, beta 3	CR615484|TUBB3|10381|tubulin, beta 3	CR615487|TUBB3|10381|tubulin, beta 3	CR616697|TUBB3|10381|tubulin, beta 3	CR624252|TUBB3|10381|tubulin, beta 3	CR624879|TUBB3|10381|tubulin, beta 3	CR625914|TUBB3|10381|tubulin, beta 3	CR593464|TUBB3|10381|tubulin, beta 3	CR600381|TUBB3|10381|tubulin, beta 3	CR601914|TUBB3|10381|tubulin, beta 3	CR605928|TUBB3|10381|tubulin, beta 3	CR609561|TUBB3|10381|tubulin, beta 3	CR590708|TUBB3|10381|tubulin, beta 3	CR596505|TUBB3|10381|tubulin, beta 3	CR598551|TUBB3|10381|tubulin, beta 3	CR600096|TUBB3|10381|tubulin, beta 3	CR604086|TUBB3|10381|tubulin, beta 3	CR605687|TUBB3|10381|tubulin, beta 3	CR611346|TUBB3|10381|tubulin, beta 3	CR614854|TUBB3|10381|tubulin, beta 3	CR615754|TUBB3|10381|tubulin, beta 3	CR623384|TUBB3|10381|tubulin, beta 3	CR594063|TUBB3|10381|tubulin, beta 3	CR596211|TUBB3|10381|tubulin, beta 3	CR596786|TUBB3|10381|tubulin, beta 3	CR599992|TUBB3|10381|tubulin, beta 3	CR603504|TUBB3|10381|tubulin, beta 3	CR603509|TUBB3|10381|tubulin, beta 3	CR603741|TUBB3|10381|tubulin, beta 3	CR614150|TUBB3|10381|tubulin, beta 3	CR623445|TUBB3|10381|tubulin, beta 3	CR592535|TUBB3|10381|tubulin, beta 3	CR609278|TUBB3|10381|tubulin, beta 3	CR610945|TUBB3|10381|tubulin, beta 3	CR623379|TUBB3|10381|tubulin, beta 3	CR609372|TUBB3|10381|tubulin, beta 3	CR622759|TUBB3|10381|tubulin, beta 3	BC064975|TUBB3|10381|tubulin, beta 3	CR624149|TUBB3|10381|tubulin, beta 3	CR593269|TUBB3|10381|tubulin, beta 3	CR600094|TUBB3|10381|tubulin, beta 3	CR612703|TUBB3|10381|tubulin, beta 3	AF427491|TUBB3|10381|tubulin, beta 3	U47634|TUBB3|10381|tubulin, beta 3	S62643|TUBB3|10381|tubulin, beta 3
hg18_v1_chr12_+_63090008_63090082	0.156785	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr4_-_83569476_83569571	0.156398	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_-_20375497_20375564	0.156096	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr7_+_5598979_5599093	0.156016	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr12_+_27288344_27288438	0.155903	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr3_+_157875063_157875129	0.155595	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr4_-_141294682_141294883	0.1555	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg18_v1_chr10_+_73393998_73394128	0.155425	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg18_v1_chr12_-_15005761_15005869	0.155224	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr14_+_22375753_22375866	0.155142	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr2_-_2313894_2314051	0.155084	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr4_-_152366970_152367109	0.155	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr2_+_24003648_24003674	0.154818	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg18_v1_chr3_-_116348780_116348829	0.15367	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr1_-_25164061_25164198	0.153601	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr7_-_36992221_36992270	0.153225	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	NM_130442|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr8_+_63324053_63324184	0.152856	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr20_-_41788975_41789055	0.152611	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr11_-_10786875_10787026	0.152556	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr12_-_49763405_49763501	0.152311	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr6_-_46401174_46401352	0.151941	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2	CR604948|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr5_+_176807931_176807940	0.151723	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg18_v1_chr9_+_35528628_35528628	0.151476	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr7_+_55400634_55400634	0.151459	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr7_-_99899829_99899829	0.15121	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg18_v1_chr3_+_66527586_66527713	0.150998	SOX2.p2	
hg18_v1_chr12_-_101396459_101396558	0.150291	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr12_+_58369392_58369421	0.150053	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg18_v1_chr12_+_111980044_111980102	0.14992	SOX2.p2	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr15_-_32446537_32447207	0.149573	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	CR617279|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg18_v1_chr3_+_184836049_184836139	0.149502	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr14_-_52689782_52689819	0.14942	SOX2.p2	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr14_-_105589467_105589979	0.149306	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr4_-_83569572_83569642	0.148499	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr1_-_199742589_199742589	0.148285	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chrX_+_80343958_80344160	0.148133	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR615275|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr13_-_24395054_24395084	0.147676	SOX2.p2	NM_018451|CENPJ|55835|centromere protein J
hg18_v1_chr4_-_158111995_158112023	0.147513	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr14_-_52689680_52689756	0.146919	SOX2.p2	DQ315474|DDHD1|80821|DDHD domain containing 1	GU376468|DDHD1|80821|DDHD domain containing 1	BC030703|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr22_+_17012841_17012964	0.146408	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr4_+_1842947_1843045	0.146125	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr5_+_76418214_76418347	0.145703	SOX2.p2	AK311179|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr2_+_68445936_68445987	0.145305	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg18_v1_chr5_+_162862808_162862925	0.145252	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	CR622441|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta	CR596069|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chrX_-_2857351_2857426	0.144778	SOX2.p2	AK314479|ARSD|414|arylsulfatase D	AK021472|ARSD|414|arylsulfatase D	NM_001669|ARSD|414|arylsulfatase D	NM_009589|ARSD|414|arylsulfatase D	X83572|ARSD|414|arylsulfatase D
hg18_v1_chr7_-_115458010_115458034	0.144509	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg18_v1_chr1_+_242283906_242283930	0.144113	SOX2.p2	
hg18_v1_chr5_-_150517528_150517635	0.143848	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg18_v1_chr19_-_57924946_57924946	0.143732	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg18_v1_chr12_-_107551744_107551780	0.143563	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr2_-_218551786_218551796	0.143467	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg18_v1_chr14_+_65205750_65205885	0.143323	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr5_-_16795336_16795338	0.14325	SOX2.p2	AK316138|MYO10|4651|myosin X
hg18_v1_chr15_+_61583826_61583845	0.142632	SOX2.p2	AK314223|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr7_-_27125738_27125738	0.142591	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg18_v1_chr3_+_69895310_69895396	0.142468	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr21_+_34658192_34658241	0.142212	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg18_v1_chr11_+_112337199_112337216	0.141647	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr17_+_71772875_71772884	0.141402	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr18_+_30327341_30327382	0.141147	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr22_+_29807231_29807334	0.141045	SOX2.p2	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg18_v1_chr5_+_126140949_126141098	0.141027	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg18_v1_chr14_+_22059212_22059254	0.140996	SOX2.p2	
hg18_v1_chr8_-_42742729_42742931	0.1405	SOX2.p2	Y16282|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	BC014456|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	U62435|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK298798|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK313521|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg18_v1_chr20_-_2589476_2589596	0.140489	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr14_+_22375747_22375752	0.140057	SOX2.p2	X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr8_+_63323739_63323781	0.139745	SOX2.p2	AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr15_+_83724743_83725047	0.139677	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chr17_-_44037332_44037355	0.138832	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr3_-_161766055_161766110	0.138823	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr1_-_199742864_199742868	0.138481	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr11_+_65164167_65164167	0.138445	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr5_+_143171918_143171984	0.138309	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg18_v1_chr3_-_161765860_161765913	0.138141	SOX2.p2	CR597383|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr14_+_64041170_64041223	0.138135	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr10_+_49562866_49562926	0.138058	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr19_+_7486987_7487103	0.137718	SOX2.p2	NM_018083|ZNF358|140467|zinc finger protein 358	CR623119|ZNF358|140467|zinc finger protein 358
hg18_v1_chr4_-_147079018_147079236	0.13745	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr5_+_140777454_140777610	0.137428	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg18_v1_chr12_-_21649019_21649047	0.137148	SOX2.p2	AK308373|GYS2|2998|glycogen synthase 2 (liver)	D29685|GYS2|2998|glycogen synthase 2 (liver)	NM_021957|GYS2|2998|glycogen synthase 2 (liver)
hg18_v1_chr15_-_39973566_39973566	0.136503	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg18_v1_chr16_-_45422540_45422638	0.136212	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr13_+_23451919_23451948	0.135896	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr9_+_35528890_35528938	0.135543	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr17_+_3518834_3518864	0.135512	SOX2.p2	CR609408|TMEM93|83460|transmembrane protein 93	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg18_v1_chr2_+_201385019_201385152	0.134789	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr12_-_3732478_3732580	0.134756	SOX2.p2	BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B	AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr20_+_60558104_60558104	0.134682	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr11_-_101828563_101829084	0.134616	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr6_-_42527760_42527842	0.134536	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg18_v1_chr7_+_18515440_18515473	0.13439	SOX2.p2	AK304410|HDAC9|9734|histone deacetylase 9
hg18_v1_chr1_-_241485105_241485285	0.134359	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chrX_+_21868635_21868859	0.134175	SOX2.p2	CR591649|SMS|6611|spermine synthase	NM_004595|SMS|6611|spermine synthase	CR591187|SMS|6611|spermine synthase	CR617235|SMS|6611|spermine synthase	CR617125|SMS|6611|spermine synthase	CR619263|SMS|6611|spermine synthase	CR624838|SMS|6611|spermine synthase	CR608120|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	CR594549|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	CR598032|SMS|6611|spermine synthase	CR620002|SMS|6611|spermine synthase	CR607592|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	CR591729|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg18_v1_chr3_-_87122936_87122946	0.134166	SOX2.p2	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr1_+_175406685_175406718	0.134103	SOX2.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg18_v1_chr2_+_68445821_68445931	0.133909	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg18_v1_chr10_+_86174665_86174686	0.133648	SOX2.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr2_+_88148413_88148516	0.133648	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr20_-_1298493_1298697	0.133567	SOX2.p2	CR615284|FKBP1A|2280|FK506 binding protein 1A, 12kDa	CR602019|FKBP1A|2280|FK506 binding protein 1A, 12kDa
hg18_v1_chr5_+_35892747_35892834	0.133545	SOX2.p2	BC020717|IL7R|3575|interleukin 7 receptor	FJ529208|IL7R|3575|interleukin 7 receptor	NM_002185|IL7R|3575|interleukin 7 receptor	AK301220|IL7R|3575|interleukin 7 receptor	BC067537|IL7R|3575|interleukin 7 receptor	BC067538|IL7R|3575|interleukin 7 receptor	BC067539|IL7R|3575|interleukin 7 receptor	BC067540|IL7R|3575|interleukin 7 receptor	BC069999|IL7R|3575|interleukin 7 receptor	M29696|IL7R|3575|interleukin 7 receptor	AK315251|IL7R|3575|interleukin 7 receptor
hg18_v1_chr8_+_26296439_26296563	0.133524	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr2_+_36777336_36777365	0.133287	SOX2.p2	NM_001177969|VIT|5212|vitrin	NM_001177970|VIT|5212|vitrin	NM_001177971|VIT|5212|vitrin	NM_001177972|VIT|5212|vitrin	NM_053276|VIT|5212|vitrin	AK299426|VIT|5212|vitrin
hg18_v1_chr12_-_56159895_56159899	0.133268	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr20_+_43478120_43478217	0.133168	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR602801|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR620597|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR604599|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR619784|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg18_v1_chr17_-_39094787_39094815	0.132568	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr3_+_135996990_135996992	0.13245	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg18_v1_chr19_+_16105837_16105837	0.132344	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr7_+_18515488_18515500	0.132319	SOX2.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg18_v1_chr22_+_17012704_17012764	0.132027	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr8_-_125648576_125648599	0.131692	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr17_-_24163517_24163629	0.131493	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr4_-_176971175_176971175	0.13147	SOX2.p2	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg18_v1_chr19_-_20540380_20540470	0.131277	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg18_v1_chr9_-_4142182_4142182	0.131237	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr4_+_2790338_2790338	0.131023	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chrX_+_92815667_92815667	0.131014	SOX2.p2	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A	NM_001171110|FAM133A|286499|family with sequence similarity 133, member A	NM_001171111|FAM133A|286499|family with sequence similarity 133, member A	NM_173698|FAM133A|286499|family with sequence similarity 133, member A
hg18_v1_chr1_-_205161821_205162000	0.130851	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	CR625287|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg18_v1_chr11_-_64403712_64403762	0.130798	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chr2_-_44440358_44440391	0.130719	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg18_v1_chr17_+_28279040_28279228	0.130317	SOX2.p2	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr2_-_210744158_210744432	0.130192	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr11_+_100063061_100063616	0.129958	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr4_+_124537334_124537479	0.129859	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr12_-_107551783_107551800	0.129794	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr2_+_201384880_201384887	0.129787	SOX2.p2	CR624660|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr2_-_61566477_61566607	0.129492	SOX2.p2	CR609163|XPO1|7514|exportin 1 (CRM1 homolog, yeast)
hg18_v1_chr5_+_65408500_65408622	0.129454	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr5_+_65053749_65053956	0.129364	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr15_+_54998144_54998177	0.129278	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg18_v1_chr5_-_88215034_88215049	0.129064	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chrX_+_70438352_70438379	0.129005	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg18_v1_chr1_+_40486159_40486226	0.128782	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	CR613757|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg18_v1_chr16_-_3870714_3870722	0.128692	SOX2.p2	U85962|CREBBP|1387|CREB binding protein
hg18_v1_chr7_-_130443379_130443425	0.12867	SOX2.p2	BC047367|FLJ43663|378805|hypothetical LOC378805	CR622681|FLJ43663|378805|hypothetical LOC378805
hg18_v1_chr17_-_928960_928990	0.128614	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg18_v1_chr16_+_67131161_67131161	0.128456	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr6_-_32271868_32271902	0.12833	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg18_v1_chr3_+_161040343_161040432	0.128105	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr2_+_187163232_187163312	0.127944	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr1_-_23758871_23758908	0.127901	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr9_+_70161634_70161634	0.127774	SOX2.p2	BC033073|PGM5|5239|phosphoglucomutase 5	NM_021965|PGM5|5239|phosphoglucomutase 5
hg18_v1_chr3_+_66094324_66094324	0.127772	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr4_+_53938586_53938656	0.127757	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr11_-_10787028_10787079	0.127584	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr17_-_71287417_71287456	0.127421	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595774|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR611244|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602412|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR604778|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR606388|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595544|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603793|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR617433|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602780|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618082|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR619729|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621264|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625366|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR591387|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603175|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621009|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618076|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR624690|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595062|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR597711|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602581|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR605171|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR610507|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR614120|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR615382|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR616111|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR608885|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR622957|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR599200|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625547|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg18_v1_chr7_-_99536214_99536321	0.127349	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr12_+_11694172_11694328	0.126862	SOX2.p2	U11732|ETV6|2120|ets variant 6	EU446474|ETV6|2120|ets variant 6	Z35761|ETV6|2120|ets variant 6
hg18_v1_chr3_-_113842652_113842682	0.126828	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr12_+_9713472_9713597	0.126734	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg18_v1_chr7_+_142850667_142850667	0.126729	SOX2.p2	BC100938|TAS2R60|338398|taste receptor, type 2, member 60	BC100939|TAS2R60|338398|taste receptor, type 2, member 60	BC100940|TAS2R60|338398|taste receptor, type 2, member 60	BC100941|TAS2R60|338398|taste receptor, type 2, member 60	NM_177437|TAS2R60|338398|taste receptor, type 2, member 60
hg18_v1_chr4_-_91979113_91979291	0.126712	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr17_-_3518654_3518721	0.126518	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr5_-_146813343_146813573	0.126449	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr11_-_101906640_101906699	0.126258	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg18_v1_chr2_-_30883775_30883820	0.126203	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg18_v1_chr8_-_93099040_93099083	0.125966	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr4_-_64957595_64957788	0.125864	SOX2.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg18_v1_chr6_-_25044156_25044168	0.12579	SOX2.p2	AK299047|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr8_+_104452961_104453097	0.125468	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr17_+_11864841_11864972	0.125409	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr5_-_150517499_150517526	0.125223	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chr2_-_197883739_197883789	0.125089	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg18_v1_chr1_-_198645695_198645785	0.124921	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr11_-_119104463_119104722	0.124847	SOX2.p2	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg18_v1_chr1_+_45565126_45565252	0.124788	SOX2.p2	CR620904|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR622386|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR602636|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR597681|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg18_v1_chr1_-_233558071_233558110	0.124608	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr3_+_157874898_157874898	0.124291	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr3_-_113841941_113841950	0.124137	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr3_+_173954940_173955053	0.123953	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr14_+_51526071_51526107	0.123773	SOX2.p2	CR594131|C14orf166|51637|chromosome 14 open reading frame 166	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr14_+_51525942_51526067	0.123694	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr9_-_35738875_35739029	0.123658	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr17_-_45621312_45621316	0.123582	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr22_-_48607449_48607521	0.123245	SOX2.p2	AK304776|BRD1|23774|bromodomain containing 1
hg18_v1_chr3_+_153469421_153469444	0.123138	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr12_-_107551694_107551713	0.122608	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr22_+_36928972_36928972	0.122333	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg18_v1_chr3_-_161766005_161766023	0.122332	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr7_-_115458047_115458061	0.122288	SOX2.p2	AK313546|TFEC|22797|transcription factor EC
hg18_v1_chr6_-_159386007_159386171	0.122272	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr3_-_11598829_11598837	0.122154	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr15_+_54998264_54998321	0.122071	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg18_v1_chr5_-_175896829_175897037	0.121952	SOX2.p2	AB029023|RNF44|22838|ring finger protein 44	BC039833|RNF44|22838|ring finger protein 44	BC063297|RNF44|22838|ring finger protein 44	NM_014901|RNF44|22838|ring finger protein 44
hg18_v1_chr19_-_53941835_53941979	0.121904	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg18_v1_chr8_-_96030719_96030948	0.12185	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr8_+_61592097_61592104	0.121593	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr17_+_59875623_59875900	0.121588	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr17_+_30594192_30594220	0.121313	SOX2.p2	NM_144975|SLFN5|162394|schlafen family member 5	AK303632|SLFN5|162394|schlafen family member 5	BX647942|SLFN5|162394|schlafen family member 5	AK054668|SLFN5|162394|schlafen family member 5	AK303299|SLFN5|162394|schlafen family member 5	BC021238|SLFN5|162394|schlafen family member 5
hg18_v1_chr8_+_42871319_42871431	0.121265	SOX2.p2	
hg18_v1_chr3_+_161040439_161040667	0.121058	SOX2.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr3_-_51976428_51976521	0.121026	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg18_v1_chr2_+_12775336_12775398	0.120955	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr10_+_35524835_35524959	0.120949	SOX2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr3_-_71262426_71262435	0.120719	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chr2_-_86276403_86276403	0.120523	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr12_+_27288475_27288503	0.120406	SOX2.p2	CR602115|STK38L|23012|serine/threonine kinase 38 like	AK304755|STK38L|23012|serine/threonine kinase 38 like	CR606717|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr1_-_233558117_233558154	0.120333	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr3_-_71262405_71262422	0.120077	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr14_-_73250094_73250935	0.12005	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg18_v1_chr3_+_134239860_134239894	0.119278	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg18_v1_chr15_+_82945223_82945347	0.119089	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr2_-_207291364_207291364	0.118854	SOX2.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr4_-_54625223_54625344	0.118799	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr22_+_44828338_44828438	0.118644	SOX2.p2	
hg18_v1_chr11_+_72697310_72697316	0.118507	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr2_-_197165495_197165579	0.118343	SOX2.p2	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr10_-_75080784_75080805	0.118078	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg18_v1_chr17_-_40655347_40655423	0.117932	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr22_+_28329649_28330080	0.117766	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg18_v1_chr18_-_59137488_59137592	0.11772	SOX2.p2	BC027258|BCL2|596|B-cell CLL/lymphoma 2	NM_000633|BCL2|596|B-cell CLL/lymphoma 2	NM_000657|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chr10_-_13430195_13430351	0.117644	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr5_+_175725050_175725140	0.117392	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg18_v1_chr2_-_75641535_75641575	0.117331	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A	CR615454|FAM176A|84141|family with sequence similarity 176, member A
hg18_v1_chr11_+_89032112_89032112	0.117112	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg18_v1_chr16_-_70763849_70763849	0.116823	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr1_+_181871830_181872100	0.116323	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr11_+_111666133_111666228	0.116278	SOX2.p2	
hg18_v1_chr2_+_201384904_201384907	0.116115	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr9_+_102380156_102380264	0.116115	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg18_v1_chr12_-_16650687_16650691	0.115913	SOX2.p2	AK312418|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr15_-_43457916_43458146	0.115854	SOX2.p2	S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr9_-_37455384_37455406	0.115728	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr15_+_61583846_61584015	0.11546	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr9_-_90983195_90983374	0.115432	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr19_-_49131250_49131299	0.115149	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg18_v1_chr1_-_241484963_241484995	0.11505	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr4_+_2789686_2789737	0.114861	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr17_-_4216563_4216751	0.114857	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR623407|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr18_+_30327243_30327282	0.11461	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr2_-_110231431_110231431	0.11457	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr18_+_54682261_54682397	0.11455	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr3_+_134239906_134239942	0.114329	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg18_v1_chr4_-_141896920_141896979	0.114044	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg18_v1_chr4_+_78172966_78173092	0.113869	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr5_+_139008052_139008065	0.113646	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr10_+_97461525_97461525	0.113044	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr3_+_110338250_110338256	0.112954	SOX2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr1_-_233558114_233558115	0.112602	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr8_-_78075834_78075834	0.11256	SOX2.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr15_-_88148538_88148610	0.112287	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr13_-_24394913_24395026	0.112256	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg18_v1_chr8_-_93181091_93181091	0.11207	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_+_151171755_151171799	0.111635	SOX2.p2	BC012363|LOC646903|646903|hypothetical LOC646903	CR593252|LOC646903|646903|hypothetical LOC646903
hg18_v1_chr3_-_113842350_113842363	0.111588	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr11_+_71387572_71387756	0.111178	SOX2.p2	CR605363|IL18BP|10068|interleukin 18 binding protein	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg18_v1_chr5_-_9683462_9683462	0.111163	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg18_v1_chr17_-_3518568_3518627	0.111036	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR607043|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR619400|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606577|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR609956|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR591740|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR601638|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR602958|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606404|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr1_+_219119623_219119822	0.110993	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg18_v1_chr9_-_21984414_21984622	0.110923	SOX2.p2	S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	CR604976|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr17_-_16816113_16816145	0.110848	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr9_+_90193807_90193830	0.110795	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr5_-_134762814_134762826	0.110551	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	CR607903|H2AFY|9555|H2A histone family, member Y	CR622086|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_+_149299504_149299524	0.110459	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR602062|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR603022|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604725|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608615|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR593527|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr10_+_11246934_11247016	0.110244	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_+_113060716_113060806	0.110157	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg18_v1_chr6_-_117853710_117853738	0.109812	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr1_-_202432165_202432250	0.109773	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr9_-_73715666_73715825	0.109764	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr10_-_119795663_119796405	0.109654	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg18_v1_chr1_-_229058404_229058404	0.109575	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr11_-_6870306_6870405	0.10937	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr1_+_111215343_111215361	0.109045	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr15_-_99609197_99609321	0.108979	SOX2.p2	AB071402|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr4_-_83569853_83570272	0.108661	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_+_201384842_201384877	0.108618	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr1_-_199657468_199657496	0.108541	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr2_+_102744921_102744973	0.108467	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr11_-_10546654_10546940	0.108364	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR598862|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614245|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR604450|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR612000|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614790|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR599107|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR595979|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR597409|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR605021|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg18_v1_chr4_-_86106567_86106567	0.108338	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr6_-_44388964_44389045	0.107713	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg18_v1_chr13_-_74953873_74954806	0.107697	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr1_-_191422346_191422365	0.107545	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg18_v1_chr2_+_128644510_128644524	0.107533	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg18_v1_chr9_-_135334003_135334096	0.107471	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg18_v1_chr1_+_165330710_165330710	0.10745	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg18_v1_chr5_+_140187746_140187860	0.107368	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg18_v1_chr3_-_113841967_113841977	0.106807	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr4_+_154397975_154398004	0.106783	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr9_-_35818728_35818743	0.106622	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg18_v1_chrX_-_142551587_142551591	0.106463	SOX2.p2	NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr12_-_101398288_101398403	0.106416	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr19_-_54557450_54557525	0.10629	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg18_v1_chr5_-_150517454_150517495	0.106279	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg18_v1_chr4_-_104240413_104240485	0.10624	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR601062|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR625169|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR599040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR605040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg18_v1_chr5_-_77880731_77880827	0.106082	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr11_-_27679617_27679755	0.106072	SOX2.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr3_+_99733432_99733567	0.105989	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chr3_-_113842133_113842168	0.105881	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr12_+_93066370_93066900	0.105517	SOX2.p2	AF030339|PLXNC1|10154|plexin C1	NM_005761|PLXNC1|10154|plexin C1	BC029934|PLXNC1|10154|plexin C1
hg18_v1_chr1_-_153109349_153109391	0.105355	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chrX_-_2892288_2892493	0.105318	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg18_v1_chr15_+_49988882_49988922	0.105255	SOX2.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg18_v1_chr20_-_1420004_1420067	0.105234	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr4_+_146250978_146251023	0.104741	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr9_-_37455429_37455453	0.104643	SOX2.p2	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr4_-_158111504_158111830	0.104578	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr9_-_113561613_113561633	0.104375	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr4_+_53938666_53938766	0.104322	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr15_-_88148177_88148182	0.104294	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr14_+_59020894_59021067	0.104271	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr4_-_158111916_158111940	0.104007	SOX2.p2	BC136662|PDGFC|56034|platelet derived growth factor C	BC144348|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr16_-_70474912_70474944	0.10398	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr2_+_201384889_201384893	0.103597	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr17_+_17548888_17548959	0.102981	SOX2.p2	
hg18_v1_chr4_+_176076083_176076133	0.102938	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chr6_+_39868770_39868843	0.102936	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg18_v1_chr8_+_1940282_1940348	0.102844	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chr15_-_99609648_99609668	0.102717	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr8_+_23160098_23160277	0.102429	SOX2.p2	AK092500|CHMP7|91782|CHMP family, member 7	AL833843|CHMP7|91782|CHMP family, member 7	BC019110|CHMP7|91782|CHMP family, member 7	AK296592|CHMP7|91782|CHMP family, member 7	BC004344|CHMP7|91782|CHMP family, member 7
hg18_v1_chr16_+_67017_67017	0.102294	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg18_v1_chr12_-_3732614_3732672	0.102219	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr5_+_126140718_126140743	0.102072	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr20_+_19903778_19903991	0.10202	SOX2.p2	M37190|RIN2|54453|Ras and Rab interactor 2	CR617469|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr14_+_64041257_64041295	0.101992	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr6_+_17390910_17391056	0.101928	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr16_+_83349816_83349878	0.101916	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chr22_+_38627031_38627109	0.101394	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	CR604186|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr6_-_33016561_33016824	0.101384	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr5_-_111121691_111121813	0.101016	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr11_+_20001130_20001211	0.100784	SOX2.p2	NM_001111019|NAV2|89797|neuron navigator 2
hg18_v1_chr14_-_54720101_54720218	0.100782	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg18_v1_chr6_-_32742265_32742571	0.100604	SOX2.p2	L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1
hg18_v1_chr12_-_119733062_119733071	0.100551	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase 3
hg18_v1_chr12_+_123339662_123339662	0.100379	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg18_v1_chr14_-_23090606_23090714	0.100363	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr4_+_134292630_134292837	0.10033	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	CR625417|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg18_v1_chr2_+_101874809_101875119	0.100279	SOX2.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr5_+_88221013_88221028	0.100246	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg18_v1_chr1_+_6607511_6607511	0.100232	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr17_-_26665194_26665200	0.100125	SOX2.p2	AK312822|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr11_+_69165159_69165262	0.0997253	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg18_v1_chr3_+_138020550_138020682	0.099611	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	CR602043|TMEM22|80723|transmembrane protein 22	CR602057|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22	CR618483|TMEM22|80723|transmembrane protein 22
hg18_v1_chr17_-_5344898_5345093	0.0995484	SOX2.p2	CR622361|LOC728392|728392|hypothetical protein LOC728392	AF217966|LOC728392|728392|hypothetical protein LOC728392	CR604079|LOC728392|728392|hypothetical protein LOC728392	CR619296|LOC728392|728392|hypothetical protein LOC728392	CR623524|LOC728392|728392|hypothetical protein LOC728392	CR608370|LOC728392|728392|hypothetical protein LOC728392	CR620539|LOC728392|728392|hypothetical protein LOC728392	CR612487|LOC728392|728392|hypothetical protein LOC728392	CR612489|LOC728392|728392|hypothetical protein LOC728392	AF131825|LOC728392|728392|hypothetical protein LOC728392	CR620726|LOC728392|728392|hypothetical protein LOC728392	NM_001162371|LOC728392|728392|hypothetical protein LOC728392	CR618493|LOC728392|728392|hypothetical protein LOC728392
hg18_v1_chr4_-_54625463_54625521	0.0994819	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr13_-_44048391_44048470	0.0994539	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr10_+_118340460_118340631	0.0990235	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg18_v1_chr9_-_21984329_21984370	0.0987495	SOX2.p2	BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr1_-_177378801_177378846	0.098745	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr6_+_53043729_53043729	0.0986692	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr16_-_73858179_73858207	0.0984828	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr14_-_57030227_57030328	0.0984745	SOX2.p2	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg18_v1_chr8_-_105670300_105670398	0.0982707	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr1_+_89871231_89871236	0.0980318	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr12_+_95112385_95112412	0.0979216	SOX2.p2	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr19_-_15451203_15451316	0.0977468	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg18_v1_chr12_-_16650697_16650731	0.0975672	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	CR598247|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr5_+_139856688_139856810	0.0975376	SOX2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr11_-_123030091_123030351	0.0974787	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chrX_-_43717864_43717864	0.0974597	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr7_-_66097838_66098033	0.0970468	SOX2.p2	CR597378|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR606624|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622210|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601377|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR610261|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622442|SBDS|51119|Shwachman-Bodian-Diamond syndrome	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR591576|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR604577|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR612387|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601234|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR613995|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR596032|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR626007|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg18_v1_chr6_-_33864876_33864881	0.0968821	SOX2.p2	CR606517|LEMD2|221496|LEM domain containing 2
hg18_v1_chr20_+_56903595_56903646	0.0963704	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg18_v1_chr5_-_140680523_140680549	0.0961696	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr3_+_135996734_135996949	0.0961065	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg18_v1_chr5_+_53849251_53849353	0.0961059	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg18_v1_chr2_-_43919392_43919507	0.0960839	SOX2.p2	BC111541|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	BC111542|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AF320293|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AF312715|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	NM_022436|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5	AK091997|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5
hg18_v1_chr13_-_44048601_44048700	0.0959998	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr1_+_149299490_149299497	0.0959626	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chrX_-_37964924_37965215	0.0959547	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	CR625902|SRPX|8406|sushi-repeat containing protein, X-linked	CR597663|SRPX|8406|sushi-repeat containing protein, X-linked	CR606094|SRPX|8406|sushi-repeat containing protein, X-linked	CR609268|SRPX|8406|sushi-repeat containing protein, X-linked	CR613384|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	CR591734|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr21_-_26345294_26345335	0.0958643	SOX2.p2	
hg18_v1_chr5_-_132189762_132189900	0.095862	SOX2.p2	BC104914|SHROOM1|134549|shroom family member 1	BC104916|SHROOM1|134549|shroom family member 1	BC143494|SHROOM1|134549|shroom family member 1	AF314142|SHROOM1|134549|shroom family member 1	NM_133456|SHROOM1|134549|shroom family member 1
hg18_v1_chr12_+_50633430_50633430	0.0958146	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr5_-_140680470_140680517	0.0956424	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr20_-_33705244_33705244	0.0956331	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg18_v1_chr1_+_100590640_100590743	0.0954729	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr15_+_72861767_72862051	0.0954493	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg18_v1_chr12_+_102982365_102982468	0.0954269	SOX2.p2	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg18_v1_chr17_+_3993166_3993298	0.0952912	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	CR596829|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr10_+_69314714_69314882	0.0952171	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chr6_-_139737042_139737191	0.0947454	SOX2.p2	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr4_+_15089931_15089963	0.0946986	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr3_-_107070400_107070595	0.0946757	SOX2.p2	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg18_v1_chr4_-_122304925_122304925	0.094613	SOX2.p2	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3	AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3	AK290409|TNIP3|79931|TNFAIP3 interacting protein 3	BC128408|TNIP3|79931|TNFAIP3 interacting protein 3	EF585496|TNIP3|79931|TNFAIP3 interacting protein 3	NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3
hg18_v1_chr3_-_113842237_113842248	0.0944701	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr12_+_91654395_91654441	0.0942803	SOX2.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg18_v1_chr6_+_139391511_139391550	0.0942184	SOX2.p2	NM_021243|C6orf115|58527|chromosome 6 open reading frame 115	AF161398|C6orf115|58527|chromosome 6 open reading frame 115
hg18_v1_chr20_-_38751289_38751294	0.0941652	SOX2.p2	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg18_v1_chr6_+_157141565_157141570	0.0939971	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr9_-_3213007_3213066	0.0937333	SOX2.p2	
hg18_v1_chrX_-_73751155_73751173	0.0935035	SOX2.p2	AK001334|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr3_-_171013145_171013413	0.0934736	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34	CR606238|LRRC34|151827|leucine rich repeat containing 34
hg18_v1_chr10_+_122600843_122600927	0.093304	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr3_+_70068440_70068563	0.0931574	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr18_-_71049977_71050001	0.0928234	SOX2.p2	
hg18_v1_chr7_+_26158257_26158660	0.0927173	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chr12_+_27288446_27288462	0.0927127	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr7_+_106293112_106293218	0.09249	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr1_+_246635918_246635918	0.0921195	SOX2.p2	NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1
hg18_v1_chr5_+_125786975_125787197	0.092026	SOX2.p2	AK024966|GRAMD3|65983|GRAM domain containing 3	AK225829|GRAMD3|65983|GRAM domain containing 3	BC008590|GRAMD3|65983|GRAM domain containing 3	AK294656|GRAMD3|65983|GRAM domain containing 3	AK293307|GRAMD3|65983|GRAM domain containing 3	AK296267|GRAMD3|65983|GRAM domain containing 3	AY116970|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr3_-_113842255_113842279	0.0919693	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr8_-_7718769_7718821	0.0918344	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr12_+_48765209_48765299	0.091816	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr3_+_173043832_173043852	0.0917354	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg18_v1_chr5_-_39400319_39400411	0.0914649	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg18_v1_chr19_+_46207335_46207421	0.0913305	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chrX_+_48253007_48253152	0.0909668	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr4_-_123761615_123761661	0.0908327	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg18_v1_chr4_-_83566045_83566089	0.0904952	SOX2.p2	
hg18_v1_chr3_+_145174856_145174958	0.0903939	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg18_v1_chr11_+_125258718_125258718	0.0902421	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg18_v1_chr22_+_38627129_38627258	0.0900871	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr4_-_164754106_164754225	0.0900534	SOX2.p2	CR607777|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr16_+_56230707_56230930	0.0900133	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr22_+_42908102_42908189	0.0899948	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg18_v1_chr12_-_43731148_43731150	0.0899097	SOX2.p2	AK131230|DBX2|440097|developing brain homeobox 2	NM_001004329|DBX2|440097|developing brain homeobox 2
hg18_v1_chr14_-_34414201_34414239	0.089835	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr8_+_145136226_145136304	0.089811	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr9_+_102244005_102244041	0.0897375	SOX2.p2	CR599657|C9orf30|91283|chromosome 9 open reading frame 30	CR601135|C9orf30|91283|chromosome 9 open reading frame 30	NM_001198812|C9orf3-TMEFF1|100526694|C9orf3-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg18_v1_chr8_+_32623792_32623792	0.0894714	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr11_-_10787157_10787248	0.089392	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr1_+_219119430_219119467	0.0890199	SOX2.p2	CR591992|HLX|3142|H2.0-like homeobox
hg18_v1_chr3_-_189354510_189354619	0.0889925	SOX2.p2	BC042414|LOC339929|339929|hypothetical LOC339929
hg18_v1_chr13_+_97593711_97593728	0.0889773	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr1_+_112740380_112740403	0.0887883	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr17_-_8139330_8139468	0.0885773	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr1_+_89871212_89871230	0.0885198	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chrX_-_73751135_73751149	0.0885082	SOX2.p2	AF155109|RLIM|51132|ring finger protein, LIM domain interacting	BC013357|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr5_-_78318112_78318112	0.0884804	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg18_v1_chr14_-_103098326_103098411	0.088262	SOX2.p2	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chr2_+_54536780_54537452	0.0882315	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr7_+_128795280_128795369	0.0881983	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr7_+_47661366_47661366	0.0879126	SOX2.p2	AK126096|C7orf65|401335|chromosome 7 open reading frame 65	NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65
hg18_v1_chr1_+_6607796_6607865	0.0875381	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR601567|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR609298|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR600833|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR620139|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr19_+_10932792_10932856	0.0875249	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr2_+_204279442_204279608	0.0874954	SOX2.p2	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg18_v1_chr10_-_98263434_98263672	0.0873322	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg18_v1_chr1_+_190811479_190811584	0.0872558	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr9_-_14769530_14769530	0.0871199	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr18_-_21184824_21185468	0.0869592	SOX2.p2	
hg18_v1_chr3_+_42176662_42176857	0.086813	SOX2.p2	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1	NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1	BC015922|TRAK1|22906|trafficking protein, kinesin binding 1	AK000754|TRAK1|22906|trafficking protein, kinesin binding 1	AM392573|TRAK1|22906|trafficking protein, kinesin binding 1	AM393596|TRAK1|22906|trafficking protein, kinesin binding 1	EU446989|TRAK1|22906|trafficking protein, kinesin binding 1
hg18_v1_chr3_+_3816079_3816120	0.0867848	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg18_v1_chr3_-_161765765_161765812	0.0866258	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr16_-_76026431_76026511	0.0866169	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chr14_-_26136799_26136858	0.0865391	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg18_v1_chr14_+_22375656_22375697	0.0862435	SOX2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr1_+_199742906_199743063	0.0861695	SOX2.p2	
hg18_v1_chr3_+_189354167_189354491	0.0861274	SOX2.p2	NM_001167672|LPP|4026|LIM domain containing preferred translocation partner in lipoma	AK304035|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr12_-_11041740_11041740	0.0859741	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr1_+_116744992_116745102	0.08594	SOX2.p2	CR614469|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr16_+_15435825_15435978	0.0858882	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	CR623458|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45	CR616063|C16orf45|89927|chromosome 16 open reading frame 45
hg18_v1_chr16_-_3870686_3870712	0.0857112	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg18_v1_chr9_+_133259330_133259444	0.085691	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr16_+_2503994_2504000	0.0855418	SOX2.p2	CR597229|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr3_+_69895651_69895651	0.0854304	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr8_+_77756077_77756089	0.0854228	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg18_v1_chr16_+_2504001_2504105	0.085177	SOX2.p2	CR600796|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR590083|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR616464|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr16_-_1772577_1772609	0.0848838	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr7_+_55947824_55947861	0.0848443	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr2_+_207115060_207115102	0.0847017	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr12_+_117903682_117903778	0.0846874	SOX2.p2	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4
hg18_v1_chr15_+_72695248_72695301	0.0846052	SOX2.p2	AK293769|CLK3|1198|CDC-like kinase 3	BC019881|CLK3|1198|CDC-like kinase 3	CR933693|CLK3|1198|CDC-like kinase 3	AK291983|CLK3|1198|CDC-like kinase 3	AK301689|CLK3|1198|CDC-like kinase 3	BC002555|CLK3|1198|CDC-like kinase 3	AK225680|CLK3|1198|CDC-like kinase 3	BC006103|CLK3|1198|CDC-like kinase 3
hg18_v1_chr15_+_70553719_70553724	0.0845087	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr18_-_52456837_52456988	0.0844739	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr11_+_124539814_124539859	0.0844581	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg18_v1_chr7_-_106088565_106088914	0.0843764	SOX2.p2	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr17_+_23722689_23722825	0.0842979	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr12_+_54231249_54231277	0.0841779	SOX2.p2	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4
hg18_v1_chr5_+_170221441_170221577	0.0841753	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg18_v1_chr10_+_44775155_44775321	0.0841253	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr2_-_188127430_188127463	0.0840763	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg18_v1_chr2_+_1397186_1397187	0.0840329	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg18_v1_chr6_-_134540666_134540705	0.0840186	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr11_+_117983515_117983660	0.0836538	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg18_v1_chr12_+_48765300_48765461	0.083621	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr2_+_208102860_208102916	0.0835581	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr4_+_119174947_119175100	0.0835285	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr17_-_41626032_41626140	0.0833451	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr11_-_118739838_118740067	0.0832277	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr14_-_37795001_37795066	0.0831023	SOX2.p2	CR594082|CLEC14A|161198|C-type lectin domain family 14, member A	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr8_+_23160065_23160095	0.083086	SOX2.p2	AK315664|CHMP7|91782|CHMP family, member 7	AK021776|CHMP7|91782|CHMP family, member 7	CR606249|CHMP7|91782|CHMP family, member 7
hg18_v1_chr17_+_72958920_72959049	0.0827483	SOX2.p2	AK299828|SEPT9|10801|septin 9
hg18_v1_chr10_-_28611020_28611072	0.0827384	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr17_+_17339059_17339164	0.0821129	SOX2.p2	
hg18_v1_chr16_+_2503978_2503987	0.0821027	SOX2.p2	CR601237|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599331|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr16_+_55523248_55523248	0.0820167	SOX2.p2	NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr11_-_118740069_118740116	0.0819017	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr3_-_120761092_120761170	0.081851	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg18_v1_chr7_-_23476497_23476549	0.0818312	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg18_v1_chr19_-_11425568_11425577	0.0817702	SOX2.p2	BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
hg18_v1_chr9_-_36266930_36267052	0.0817276	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg18_v1_chr2_+_108571177_108571199	0.0815953	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr19_+_49180171_49180220	0.081553	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg18_v1_chr17_-_3518628_3518643	0.0815328	SOX2.p2	CR595900|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR615413|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr1_+_82038669_82038669	0.0815321	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr3_+_173240126_173240131	0.0814409	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr9_-_135922912_135923117	0.0813138	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg18_v1_chr8_+_98725505_98725602	0.0812611	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr14_-_68689574_68689620	0.0812423	SOX2.p2	BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr2_+_48610796_48610862	0.081202	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr9_-_21984379_21984399	0.0811919	SOX2.p2	BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr1_+_40688360_40688414	0.0811494	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr3_-_187744808_187744860	0.0810212	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr9_+_124835608_124835769	0.0810031	SOX2.p2	AK294531|RABGAP1|23637|RAB GTPase activating protein 1	AK299686|GPR21|2844|G protein-coupled receptor 21	AK313539|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr20_-_34005619_34005680	0.0807922	SOX2.p2	AM392883|SCAND1|51282|SCAN domain containing 1	AM393129|SCAND1|51282|SCAN domain containing 1	CR457188|SCAND1|51282|SCAN domain containing 1	EU446495|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr20_+_21231921_21232030	0.0806944	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg18_v1_chr12_-_7487989_7488019	0.0806603	SOX2.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg18_v1_chr4_-_14612766_14612849	0.0805501	SOX2.p2	
hg18_v1_chr9_-_21472311_21472311	0.0805408	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr7_-_25234582_25234629	0.0804141	SOX2.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg18_v1_chr11_+_59027624_59027624	0.0803441	SOX2.p2	NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11
hg18_v1_chr1_+_112740322_112740376	0.0801286	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr12_-_54901900_54901928	0.0799853	SOX2.p2	BC011626|RNF41|10193|ring finger protein 41	CR602750|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg18_v1_chr2_+_44356100_44356178	0.0799795	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg18_v1_chr5_-_36337756_36337767	0.0799077	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr12_-_90097384_90097489	0.0797623	SOX2.p2	CR602747|DCN|1634|decorin	AK291309|DCN|1634|decorin	CR601529|DCN|1634|decorin	CR611956|DCN|1634|decorin	CR607208|DCN|1634|decorin	CR626398|DCN|1634|decorin	CR613049|DCN|1634|decorin	BX571756|DCN|1634|decorin	CR601956|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg18_v1_chr10_-_44775110_44775116	0.079725	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr12_+_74071145_74071160	0.0796854	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr20_-_10602429_10602710	0.0796606	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr22_+_23945611_23945611	0.0796005	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg18_v1_chr4_+_47181987_47182188	0.0795117	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg18_v1_chr17_-_23903772_23903786	0.0795049	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	CR613554|UNC119|9094|unc-119 homolog (C. elegans)	CR600663|UNC119|9094|unc-119 homolog (C. elegans)
hg18_v1_chr5_-_172687798_172687935	0.0794979	SOX2.p2	CR597612|STC2|8614|stanniocalcin 2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg18_v1_chr6_-_83960351_83960412	0.0794341	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr5_+_176494690_176494747	0.079292	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr2_-_176656935_176656935	0.0790347	SOX2.p2	NM_001080458|EVX2|344191|even-skipped homeobox 2
hg18_v1_chr2_+_173794692_173794736	0.0789077	SOX2.p2	CR606268|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK
hg18_v1_chr19_-_55008172_55008419	0.0788849	SOX2.p2	CR592794|FUZ|80199|fuzzy homolog (Drosophila)	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	CR609003|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	CR613541|FUZ|80199|fuzzy homolog (Drosophila)	CR616619|FUZ|80199|fuzzy homolog (Drosophila)	CR621655|FUZ|80199|fuzzy homolog (Drosophila)	CR595499|FUZ|80199|fuzzy homolog (Drosophila)	CR607071|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg18_v1_chr3_+_130014957_130015132	0.0788846	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr2_+_206255376_206255471	0.0787781	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg18_v1_chr12_-_101398429_101398436	0.0786799	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr5_+_155686333_155686344	0.0785633	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr2_-_210743622_210743708	0.0785344	SOX2.p2	AK124963|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr19_-_50688310_50688357	0.078507	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg18_v1_chr1_-_26105477_26105579	0.0784605	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr8_-_105670410_105670437	0.078397	SOX2.p2	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr8_+_145136155_145136217	0.0783836	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr8_-_145136125_145136202	0.0782539	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr2_+_208102937_208102995	0.0782406	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr6_-_133076873_133076889	0.0781285	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr16_+_55523526_55523759	0.0780574	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr10_-_63698463_63698627	0.0780406	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr5_+_86599575_86599589	0.0780273	SOX2.p2	
hg18_v1_chr11_-_60880799_60880936	0.0778243	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr15_-_70838703_70838831	0.077783	SOX2.p2	
hg18_v1_chr1_-_229071957_229071957	0.0777537	SOX2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr17_-_26665144_26665164	0.077751	SOX2.p2	CR621796|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr6_-_11490487_11490566	0.0775531	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr17_-_26665213_26665218	0.0775188	SOX2.p2	BC005926|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr1_+_22176004_22176129	0.0775099	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg18_v1_chr10_-_105100834_105100866	0.077444	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr1_+_112740378_112740378	0.077397	SOX2.p2	
hg18_v1_chr21_+_43903803_43903969	0.0772614	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr20_-_49612574_49612574	0.0772577	SOX2.p2	EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr17_-_26665220_26665255	0.0772373	SOX2.p2	CR616854|EVI2B|2124|ecotropic viral integration site 2B	AK297087|EVI2B|2124|ecotropic viral integration site 2B	NM_006495|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr17_+_71773026_71773179	0.0772177	SOX2.p2	CR613339|FAM100B|283991|family with sequence similarity 100, member B	CR599986|FAM100B|283991|family with sequence similarity 100, member B	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr10_+_52420936_52420957	0.0770315	SOX2.p2	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg18_v1_chr2_-_55053398_55053426	0.0770066	SOX2.p2	
hg18_v1_chr7_+_128615948_128615948	0.0770002	SOX2.p2	BC009989|SMO|6608|smoothened homolog (Drosophila)	NM_005631|SMO|6608|smoothened homolog (Drosophila)
hg18_v1_chr8_+_87947788_87947791	0.0769973	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg18_v1_chr11_+_20000938_20000990	0.0769929	SOX2.p2	AK298346|NAV2|89797|neuron navigator 2	AJ488208|NAV2|89797|neuron navigator 2
hg18_v1_chr14_-_34414241_34414276	0.0768335	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr1_-_114215768_114215897	0.0766606	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr2_-_40532651_40532802	0.07648	SOX2.p2	Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr11_+_14883118_14883133	0.0761003	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg18_v1_chr9_-_96395828_96395895	0.0760209	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg18_v1_chr5_-_34078991_34079127	0.0759366	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg18_v1_chr4_-_54625522_54625525	0.0758685	SOX2.p2	CR624224|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr9_-_97308687_97308702	0.0758345	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg18_v1_chr5_+_180348450_180348564	0.0758051	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg18_v1_chrX_-_73751152_73751154	0.0757644	SOX2.p2	
hg18_v1_chrX_+_106030049_106030049	0.0756526	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg18_v1_chr15_+_54998115_54998124	0.0754577	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr1_+_219119468_219119607	0.0754472	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg18_v1_chr2_+_189547377_189547460	0.0754217	SOX2.p2	X07240|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr10_-_105100888_105100896	0.0753498	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr4_+_115762971_115762971	0.0752907	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg18_v1_chr7_+_28415495_28415532	0.0752725	SOX2.p2	BC087859|LOC401317|401317|hypothetical LOC401317
hg18_v1_chr15_+_70193652_70193652	0.075003	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg18_v1_chr11_+_120478584_120478584	0.0749912	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chr12_+_74071116_74071137	0.0749624	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr3_+_73128771_73128849	0.0749285	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr19_-_61680510_61680581	0.0748467	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg18_v1_chr17_+_78630793_78630870	0.0747707	SOX2.p2	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like	NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like
hg18_v1_chrX_-_73751185_73751194	0.0747427	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr5_-_138238877_138238886	0.0747182	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr12_-_6611075_6611078	0.0745383	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg18_v1_chr8_+_126511739_126511783	0.0742765	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr11_+_123945102_123945298	0.0742074	SOX2.p2	BC137194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	BC137197|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	NM_001005194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	AY726592|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1
hg18_v1_chr19_-_12456544_12456605	0.0741361	SOX2.p2	BC136746|ZNF709|163051|zinc finger protein 709	BC136751|ZNF709|163051|zinc finger protein 709	AK290911|ZNF709|163051|zinc finger protein 709	BC036481|ZNF709|163051|zinc finger protein 709
hg18_v1_chr14_+_22375632_22375648	0.0740989	SOX2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr4_-_2233606_2233637	0.0740419	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr11_+_69165065_69165118	0.074001	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg18_v1_chr4_-_185921384_185921392	0.0739263	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr20_-_61933012_61933070	0.0738905	SOX2.p2	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46	BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46
hg18_v1_chr5_-_178977441_178977522	0.0738663	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr7_-_23476156_23476253	0.0737952	SOX2.p2	
hg18_v1_chr12_-_55990512_55990512	0.0736972	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg18_v1_chr5_+_132456293_132456311	0.0736171	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr8_-_101227203_101227274	0.073598	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg18_v1_chr17_+_28279283_28279349	0.0735008	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	CR593283|TMEM98|26022|transmembrane protein 98	CR597085|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	CR596889|TMEM98|26022|transmembrane protein 98	CR613257|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	CR617431|TMEM98|26022|transmembrane protein 98	CR606539|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg18_v1_chr22_-_35011703_35011715	0.0734723	SOX2.p2	BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle
hg18_v1_chr11_-_6633427_6633651	0.0730092	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr15_-_63069146_63069229	0.0729812	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR592296|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR605959|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR593134|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR613754|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr13_+_36291306_36291493	0.0729203	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg18_v1_chr5_+_126140746_126140817	0.0727823	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	CR609276|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg18_v1_chr11_-_65082705_65082828	0.0727809	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg18_v1_chr8_+_36760999_36761058	0.0727716	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg18_v1_chr12_-_31368347_31368362	0.0725303	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr15_-_29070909_29071210	0.0723166	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr11_+_119701047_119701047	0.0722739	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr11_+_17289030_17289089	0.0720169	SOX2.p2	
hg18_v1_chr17_-_45626967_45627122	0.0719847	SOX2.p2	
hg18_v1_chr17_-_39094427_39094456	0.0719835	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr7_-_50740491_50740491	0.0719614	SOX2.p2	NM_001001550|GRB10|2887|growth factor receptor-bound protein 10	U66065|GRB10|2887|growth factor receptor-bound protein 10	U69276|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr11_+_129484540_129484559	0.0717355	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr4_+_15292500_15292601	0.0716834	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr12_+_6751930_6752049	0.0716311	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg18_v1_chr9_-_87904844_87904965	0.0715923	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr13_-_44673174_44673174	0.0715855	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg18_v1_chr20_-_34005799_34005876	0.0714801	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_016558|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr5_+_140767953_140767953	0.0714651	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg18_v1_chr1_+_6767968_6768188	0.0714216	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg18_v1_chr10_-_105100880_105100887	0.0713865	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr19_+_60858230_60858282	0.0711947	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg18_v1_chr6_+_142510094_142510104	0.0710283	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr6_+_144654565_144654657	0.071024	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg18_v1_chr16_+_2503915_2503977	0.0709626	SOX2.p2	CR592409|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599309|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR622720|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR608280|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR592150|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr19_-_1062972_1063003	0.0707813	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg18_v1_chr11_+_69165119_69165143	0.0707327	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg18_v1_chr7_-_37454933_37455054	0.0704861	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr1_+_76312962_76313138	0.0704739	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr8_+_61592105_61592132	0.0704303	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr1_-_23730298_23730299	0.0702159	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr10_-_98021144_98021322	0.070157	SOX2.p2	AM180327|BLNK|29760|B-cell linker	AM180328|BLNK|29760|B-cell linker	AM180329|BLNK|29760|B-cell linker	AM180330|BLNK|29760|B-cell linker	AM180331|BLNK|29760|B-cell linker	AM180332|BLNK|29760|B-cell linker	AM180333|BLNK|29760|B-cell linker	AM180334|BLNK|29760|B-cell linker	AM180335|BLNK|29760|B-cell linker	AM180336|BLNK|29760|B-cell linker	AM180337|BLNK|29760|B-cell linker	AM180338|BLNK|29760|B-cell linker	AM180339|BLNK|29760|B-cell linker	AM180340|BLNK|29760|B-cell linker	AM180341|BLNK|29760|B-cell linker	AM180342|BLNK|29760|B-cell linker	AM180343|BLNK|29760|B-cell linker	AM180344|BLNK|29760|B-cell linker	AM180345|BLNK|29760|B-cell linker	AM180346|BLNK|29760|B-cell linker	BC018906|BLNK|29760|B-cell linker	CR598772|BLNK|29760|B-cell linker	BC110298|BLNK|29760|B-cell linker	AK027779|BLNK|29760|B-cell linker	AF068180|BLNK|29760|B-cell linker	AF068181|BLNK|29760|B-cell linker	AK225546|BLNK|29760|B-cell linker	NM_001114094|BLNK|29760|B-cell linker	NM_013314|BLNK|29760|B-cell linker
hg18_v1_chr7_-_99517128_99517398	0.0701201	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	CR616475|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg18_v1_chr3_-_195835197_195835231	0.0700551	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44
hg18_v1_chrX_+_84385649_84385658	0.0700037	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg18_v1_chr7_-_107930170_107930246	0.0699906	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg18_v1_chr19_+_62836322_62836433	0.0697802	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	CR596216|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg18_v1_chr6_-_151754337_151754470	0.0696393	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg18_v1_chr14_-_76564374_76564501	0.0695151	SOX2.p2	AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr2_-_215955206_215955292	0.0695137	SOX2.p2	M14059|FN1|2335|fibronectin 1	M10905|FN1|2335|fibronectin 1
hg18_v1_chr6_-_10939095_10939097	0.0691869	SOX2.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chr5_+_139008091_139008137	0.0689938	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr2_-_75641587_75641610	0.0689218	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg18_v1_chr5_-_172688024_172688074	0.0687045	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg18_v1_chr14_-_106170414_106170713	0.0686836	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr16_-_73857214_73857439	0.0685507	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr2_-_204108151_204108632	0.0684061	SOX2.p2	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg18_v1_chr21_+_36429079_36429360	0.0680856	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg18_v1_chr5_-_138238891_138238934	0.0680014	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr2_-_133144094_133144253	0.0679886	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	CR601943|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr5_-_16989290_16989367	0.0679606	SOX2.p2	BC050682|MYO10|4651|myosin X	BC041694|MYO10|4651|myosin X	BC108736|MYO10|4651|myosin X	BC032669|MYO10|4651|myosin X
hg18_v1_chr2_-_86276015_86276101	0.0679426	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr1_+_100590619_100590638	0.067934	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr7_+_128795178_128795266	0.0679079	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr5_-_180175146_180175151	0.0679059	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr17_-_24491521_24491554	0.0678141	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg18_v1_chr2_+_204279624_204279664	0.0676492	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg18_v1_chr2_+_102294393_102294454	0.067396	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg18_v1_chr2_+_48610567_48610684	0.067315	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg18_v1_chr11_-_18504939_18505072	0.0672212	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chr6_-_112186977_112186977	0.0671893	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg18_v1_chr13_-_47775797_47775823	0.0670648	SOX2.p2	
hg18_v1_chr1_+_89871281_89871424	0.0670008	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr17_-_71023048_71023212	0.0669701	SOX2.p2	AF451976|CASKIN2|57513|CASK interacting protein 2	BC032359|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr3_+_184898234_184898398	0.066953	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chr6_-_32268615_32268693	0.066822	SOX2.p2	CR623296|GPSM3|63940|G-protein signaling modulator 3	CR604341|GPSM3|63940|G-protein signaling modulator 3	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr1_+_153302825_153302923	0.0666768	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg18_v1_chr12_-_47790604_47790780	0.0665639	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	CR625783|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg18_v1_chr8_+_28407613_28407756	0.0664452	SOX2.p2	AK291480|FZD3|7976|frizzled homolog 3 (Drosophila)	AB039723|FZD3|7976|frizzled homolog 3 (Drosophila)	NM_017412|FZD3|7976|frizzled homolog 3 (Drosophila)
hg18_v1_chr1_-_198645788_198645846	0.0663382	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr10_+_35466715_35466769	0.0663291	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr14_-_20340830_20340875	0.0662726	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr6_+_151228383_151228544	0.0662633	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr15_+_57286313_57286376	0.0662376	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr8_-_72919241_72919284	0.0662264	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chrX_+_106048245_106048245	0.0661815	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg18_v1_chr10_+_74323344_74323535	0.0660705	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg18_v1_chr7_+_93862137_93862278	0.0660071	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr3_+_153469206_153469405	0.0659623	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr5_-_22889487_22889487	0.0659111	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr19_+_46503524_46503529	0.0658792	SOX2.p2	CR621310|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr11_+_63510876_63510903	0.0658777	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr6_+_151228577_151228651	0.0656964	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr16_+_66464492_66464499	0.0656834	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr11_+_4571844_4571844	0.0656123	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg18_v1_chr10_+_35524060_35524123	0.065522	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	CR601807|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg18_v1_chr14_-_68689623_68689713	0.0654037	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr11_+_10787328_10787419	0.0652735	SOX2.p2	
hg18_v1_chr12_-_53314891_53314945	0.0652173	SOX2.p2	AF238867|LACRT|90070|lacritin	BC069317|LACRT|90070|lacritin	NM_033277|LACRT|90070|lacritin	BC062217|LACRT|90070|lacritin
hg18_v1_chr12_+_26096757_26096763	0.0651536	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr17_-_71023221_71023248	0.0649608	SOX2.p2	BC066643|CASKIN2|57513|CASK interacting protein 2	NM_020753|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr7_-_107667728_107667849	0.0647805	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr15_+_70553743_70553798	0.0647788	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr20_-_10602139_10602269	0.064662	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chr16_-_87535106_87535108	0.0646274	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr8_+_136539290_136539476	0.0644467	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr16_+_75790849_75790876	0.0644461	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr11_-_27637771_27637771	0.0643311	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr5_+_102493155_102493192	0.0642821	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg18_v1_chr3_-_57288019_57288019	0.0642741	SOX2.p2	AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14	BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr22_-_30072329_30072340	0.0642255	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr1_+_86942810_86942868	0.0642196	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr7_+_28418668_28418668	0.064161	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr6_-_127882192_127882192	0.0641477	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg18_v1_chr5_+_72504778_72504796	0.0641449	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg18_v1_chr9_-_19023183_19023255	0.0641385	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg18_v1_chr2_+_188865634_188865755	0.064077	SOX2.p2	NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr5_-_138238953_138238963	0.0639798	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr7_-_15568099_15568164	0.0639336	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg18_v1_chr12_+_66328760_66329020	0.0638962	SOX2.p2	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg18_v1_chr5_+_38439399_38439406	0.0636907	SOX2.p2	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182799|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg18_v1_chr21_-_39642712_39642807	0.0635577	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr5_+_172000793_172000924	0.0635205	SOX2.p2	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg18_v1_chr2_+_208103068_208103073	0.0634828	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr7_-_19778928_19778928	0.0634574	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg18_v1_chr1_+_154318954_154319041	0.0634507	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr14_-_20179689_20179689	0.0634404	SOX2.p2	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1
hg18_v1_chr5_+_179092405_179092511	0.0633711	SOX2.p2	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg18_v1_chr10_+_11247243_11247259	0.0633699	SOX2.p2	AK316354|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_+_35696119_35696282	0.0632692	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr1_-_159435440_159435470	0.0630497	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg18_v1_chr1_+_11461764_11461881	0.0629486	SOX2.p2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg18_v1_chr10_+_101282679_101282727	0.0628957	SOX2.p2	NM_145285|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	BC025788|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK313485|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK300856|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)
hg18_v1_chr7_+_71937980_71938091	0.0628852	SOX2.p2	CR607512|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR607679|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR599716|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR610804|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg18_v1_chr1_+_12108542_12108664	0.0627907	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg18_v1_chr2_+_203208064_203208145	0.0627336	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr1_-_158161898_158161900	0.0626452	SOX2.p2	CR623657|TAGLN2|8407|transgelin 2	CR609777|TAGLN2|8407|transgelin 2	CR621369|TAGLN2|8407|transgelin 2
hg18_v1_chr5_+_71538456_71538583	0.0625045	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr9_+_122877056_122877110	0.0624697	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr6_+_84619703_84619738	0.0624617	SOX2.p2	NM_001009994|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC130460|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC132968|RIPPLY2|134701|ripply2 homolog (zebrafish)
hg18_v1_chr13_+_33290254_33290315	0.0624477	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr1_+_165564904_165564941	0.0623714	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr2_-_55131096_55131118	0.0623345	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chr12_-_11066436_11066485	0.0623138	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg18_v1_chr2_-_86276102_86276231	0.0622998	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr8_+_39890484_39890598	0.0622763	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR614485|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR613807|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR616634|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR621546|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR591703|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg18_v1_chr14_-_50068928_50069192	0.0622559	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr21_-_33065849_33066042	0.0621941	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	CR603496|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg18_v1_chr12_-_54901946_54902039	0.062189	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	CR623486|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41
hg18_v1_chr14_+_64948332_64948414	0.0620302	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr2_+_108571336_108571466	0.0619974	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr2_+_210152609_210152669	0.061961	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr10_+_127398215_127398389	0.0619345	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg18_v1_chr5_-_14924555_14925155	0.0618768	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr5_-_39430180_39430277	0.061773	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr12_-_6668085_6668085	0.0617451	SOX2.p2	NM_001039916|ZNF384|171017|zinc finger protein 384
hg18_v1_chr7_-_75794919_75795084	0.0615421	SOX2.p2	CR598331|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
hg18_v1_chr17_-_39265965_39266340	0.0615385	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg18_v1_chr17_-_40866062_40866078	0.0614554	SOX2.p2	BC067345|SH3D20|201175|SH3 domain containing 20	NM_174919|SH3D20|201175|SH3 domain containing 20
hg18_v1_chr2_+_108571209_108571226	0.0613813	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr4_-_87500201_87500239	0.0612477	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr1_+_164063684_164063736	0.0612179	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr12_+_69046241_69046826	0.0609092	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr2_+_208103001_208103051	0.0606598	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr5_-_83052606_83052775	0.0606266	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr2_-_98713862_98713994	0.0605812	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr5_+_180583315_180583348	0.0603717	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr6_+_123151669_123151669	0.0603638	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr14_-_72994967_72995004	0.0602692	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr6_-_27890496_27890585	0.0602519	SOX2.p2	BC066232|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066233|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066234|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066235|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066236|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066237|HIST1H2AJ|8331|histone cluster 1, H2aj	NM_021066|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133048|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133050|HIST1H2AJ|8331|histone cluster 1, H2aj
hg18_v1_chr17_+_1566566_1566644	0.0602089	SOX2.p2	AK298567|WDR81|124997|WD repeat domain 81	NM_001163673|WDR81|124997|WD repeat domain 81	NM_152348|WDR81|124997|WD repeat domain 81	AK091136|WDR81|124997|WD repeat domain 81	BC114519|WDR81|124997|WD repeat domain 81	BC114568|WDR81|124997|WD repeat domain 81
hg18_v1_chr14_-_72995012_72995029	0.0601851	SOX2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr19_-_1603325_1603352	0.0601529	SOX2.p2	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg18_v1_chr8_+_61592048_61592048	0.06012	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr11_+_111552298_111552332	0.0600083	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr16_+_2503676_2503894	0.0599962	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr16_-_74086779_74086782	0.0599287	SOX2.p2	
hg18_v1_chr1_+_109043711_109043726	0.0598557	SOX2.p2	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr10_-_32675848_32676089	0.059689	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr1_+_219119358_219119411	0.0596337	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg18_v1_chr1_+_180836050_180836088	0.0596143	SOX2.p2	
hg18_v1_chr2_-_56003859_56003859	0.0595773	SOX2.p2	NM_004105|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg18_v1_chr19_+_46286207_46286216	0.0594656	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg18_v1_chr2_+_11213020_11213044	0.0593747	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr8_+_7332600_7332652	0.0593368	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr2_-_160838397_160838474	0.0591247	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr9_-_37455250_37455271	0.0591141	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr3_-_46761248_46761248	0.0590504	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg18_v1_chr5_+_178300799_178300843	0.0588838	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg18_v1_chr6_+_30702586_30702758	0.0587987	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	CR599754|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	CR602660|ATAT1|79969|alpha tubulin acetyltransferase 1	CR619757|ATAT1|79969|alpha tubulin acetyltransferase 1	CR594590|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	CR615059|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg18_v1_chr10_-_123677370_123677661	0.0587649	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg18_v1_chr19_-_12456625_12456632	0.0587048	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg18_v1_chr16_+_24475129_24475130	0.0586778	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr5_+_139008667_139008718	0.0586445	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr19_-_43995360_43995426	0.0586379	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg18_v1_chr13_-_110365336_110365396	0.0585868	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10	CR604585|ANKRD10|55608|ankyrin repeat domain 10
hg18_v1_chr3_-_113334657_113334841	0.0585858	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	CR625820|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg18_v1_chr12_+_108020305_108020514	0.0585518	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr13_+_30672087_30672119	0.058518	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr1_-_154484341_154484490	0.0584422	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	CR621140|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	CR618069|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	CR590814|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI	CR619912|PAQR6|79957|progestin and adipoQ receptor family member VI
hg18_v1_chr6_-_131333173_131333315	0.0584194	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr8_-_145809695_145809695	0.0583762	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg18_v1_chr7_+_128136347_128136379	0.0583375	SOX2.p2	AK093161|FAM71F1|84691|family with sequence similarity 71, member F1	AK302221|FAM71F1|84691|family with sequence similarity 71, member F1	BC040906|FAM71F1|84691|family with sequence similarity 71, member F1	AK310426|FAM71F1|84691|family with sequence similarity 71, member F1
hg18_v1_chr3_+_185233312_185233312	0.0582345	SOX2.p2	AJ437318|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	NM_001163646|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D
hg18_v1_chr7_+_142270634_142270640	0.0581573	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg18_v1_chr10_+_11247059_11247146	0.0581204	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr10_-_99042381_99042417	0.0580664	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 read-through transcript	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chr15_-_32289480_32289554	0.0580581	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr19_+_56766342_56766376	0.0580411	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg18_v1_chr2_-_2314087_2314096	0.0578473	SOX2.p2	AK307797|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr1_-_158161877_158161896	0.0578241	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2	CR607405|TAGLN2|8407|transgelin 2	CR609407|TAGLN2|8407|transgelin 2	CR612553|TAGLN2|8407|transgelin 2	CR624984|TAGLN2|8407|transgelin 2	CR592851|TAGLN2|8407|transgelin 2	CR622397|TAGLN2|8407|transgelin 2	CR626596|TAGLN2|8407|transgelin 2
hg18_v1_chr16_-_45562840_45562859	0.0577921	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg18_v1_chr8_-_145132551_145132579	0.0577851	SOX2.p2	AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr5_-_180163495_180163541	0.0577525	SOX2.p2	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr4_+_186176988_186177076	0.057713	SOX2.p2	BC140795|HELT|391723|HES/HEY-like transcription factor	BC144567|HELT|391723|HES/HEY-like transcription factor	BC144569|HELT|391723|HES/HEY-like transcription factor	NM_001029887|HELT|391723|HES/HEY-like transcription factor
hg18_v1_chr5_+_148711419_148711529	0.0577076	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr12_+_56406296_56406375	0.0576634	SOX2.p2	CR590851|LOC100130776|100130776|hypothetical LOC100130776	AK301303|LOC100130776|100130776|hypothetical LOC100130776	BC069024|LOC100130776|100130776|hypothetical LOC100130776	CR613593|LOC100130776|100130776|hypothetical LOC100130776	CR594143|LOC100130776|100130776|hypothetical LOC100130776	CR590071|LOC100130776|100130776|hypothetical LOC100130776	BC039697|LOC100130776|100130776|hypothetical LOC100130776	BC019026|LOC100130776|100130776|hypothetical LOC100130776
hg18_v1_chr12_+_12761085_12761702	0.057625	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg18_v1_chr1_+_84402962_84402974	0.0575897	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr6_-_80001043_80001111	0.0575383	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR599808|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr15_+_75074743_75074780	0.0575322	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr17_+_29707583_29707706	0.0574585	SOX2.p2	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13	U59808|CCL13|6357|chemokine (C-C motif) ligand 13	AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13	BC008621|CCL13|6357|chemokine (C-C motif) ligand 13	U46767|CCL13|6357|chemokine (C-C motif) ligand 13	X98306|CCL13|6357|chemokine (C-C motif) ligand 13	DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13	DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13	BT007385|CCL13|6357|chemokine (C-C motif) ligand 13	CR450337|CCL13|6357|chemokine (C-C motif) ligand 13	Z77650|CCL13|6357|chemokine (C-C motif) ligand 13
hg18_v1_chr3_-_153541468_153541468	0.0572653	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr5_+_139155569_139155612	0.0572479	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg18_v1_chr2_+_11212990_11213015	0.0572039	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr4_-_2233504_2233596	0.0572019	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr6_+_97117144_97117237	0.0572017	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr17_-_64752550_64752581	0.0571978	SOX2.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg18_v1_chr1_-_41259973_41260013	0.0571947	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg18_v1_chr10_+_90511142_90511142	0.0571672	SOX2.p2	EF426483|LIPN|643418|lipase, family member N	NM_001102469|LIPN|643418|lipase, family member N
hg18_v1_chrX_+_100241453_100241453	0.0571664	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg18_v1_chr11_-_121492010_121492132	0.0570963	SOX2.p2	BC130361|BLID|414899|BH3-like motif containing, cell death inducer	BC130363|BLID|414899|BH3-like motif containing, cell death inducer	AF303179|BLID|414899|BH3-like motif containing, cell death inducer	NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer
hg18_v1_chr14_-_59020878_59020883	0.0569855	SOX2.p2	
hg18_v1_chr21_+_39117064_39117101	0.0568609	SOX2.p2	CR608636|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr5_+_125786717_125786767	0.0567653	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr8_-_72918938_72919048	0.0567645	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg18_v1_chr5_+_53787187_53787376	0.0567199	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg18_v1_chr13_-_93929719_93929936	0.0566789	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr12_-_8656705_8656722	0.0566678	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr6_-_88468368_88468394	0.0566045	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg18_v1_chr11_+_55096179_55096179	0.0565928	SOX2.p2	NM_001004701|OR4C16|219428|olfactory receptor, family 4, subfamily C, member 16
hg18_v1_chr5_-_138746917_138746937	0.0565192	SOX2.p2	NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chr2_+_238200922_238201274	0.0563378	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr5_+_179853977_179854022	0.0561701	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chr22_-_37481403_37481418	0.0560058	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr5_+_79651545_79651598	0.0558957	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr16_+_4842077_4842216	0.0557714	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr20_+_30409649_30410014	0.0557146	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg18_v1_chr10_-_123677926_123678054	0.0557107	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg18_v1_chr3_-_195835298_195835497	0.055671	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr9_-_4731049_4731068	0.0555393	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg18_v1_chr2_-_21087435_21087487	0.055442	SOX2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr11_-_82460518_82460525	0.0554323	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr3_-_126325132_126325158	0.0553994	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr12_-_101398451_101398453	0.0553607	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr14_-_87529600_87529659	0.0552365	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr13_+_97403929_97403948	0.0551498	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg18_v1_chr7_-_99536966_99536981	0.0551107	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr6_+_131936057_131936115	0.0550325	SOX2.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr5_-_142764168_142764282	0.054943	SOX2.p2	AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr15_-_47125788_47126069	0.0548917	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr9_+_108665168_108665202	0.0548481	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg18_v1_chr14_-_72995032_72995056	0.0547296	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr14_-_87529222_87529403	0.0547037	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase
hg18_v1_chr12_+_21417068_21417122	0.054661	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg18_v1_chrX_-_142550535_142550684	0.0546285	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr8_-_81155564_81155605	0.0545974	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg18_v1_chr19_-_2901583_2901642	0.0544801	SOX2.p2	
hg18_v1_chr10_+_69314944_69314966	0.0542694	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr1_+_149493833_149493858	0.054268	SOX2.p2	CR622014|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr1_-_158161902_158161920	0.0542428	SOX2.p2	CR604476|TAGLN2|8407|transgelin 2	CR608575|TAGLN2|8407|transgelin 2	CR610006|TAGLN2|8407|transgelin 2	CR613520|TAGLN2|8407|transgelin 2	BC002616|TAGLN2|8407|transgelin 2	CR592747|TAGLN2|8407|transgelin 2	CR607855|TAGLN2|8407|transgelin 2	CR608199|TAGLN2|8407|transgelin 2	CR608276|TAGLN2|8407|transgelin 2	CR609748|TAGLN2|8407|transgelin 2	CR613098|TAGLN2|8407|transgelin 2	CR618095|TAGLN2|8407|transgelin 2	CR620277|TAGLN2|8407|transgelin 2	CR599010|TAGLN2|8407|transgelin 2	CR620855|TAGLN2|8407|transgelin 2	CR624026|TAGLN2|8407|transgelin 2	CR618563|TAGLN2|8407|transgelin 2	CR602105|TAGLN2|8407|transgelin 2	CR614100|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	CR590142|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg18_v1_chr4_-_70547962_70548067	0.054064	SOX2.p2	BC156239|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC157012|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	AJ006054|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC142640|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg18_v1_chr12_-_101398503_101398521	0.0539635	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr13_+_51334117_51334274	0.0538095	SOX2.p2	AK098719|CCDC70|83446|coiled-coil domain containing 70	NM_031290|CCDC70|83446|coiled-coil domain containing 70	AK225745|CCDC70|83446|coiled-coil domain containing 70	AL136887|CCDC70|83446|coiled-coil domain containing 70	BC069691|CCDC70|83446|coiled-coil domain containing 70	BC069748|CCDC70|83446|coiled-coil domain containing 70	BC069770|CCDC70|83446|coiled-coil domain containing 70	BC069806|CCDC70|83446|coiled-coil domain containing 70
hg18_v1_chr1_+_145841569_145841569	0.0537941	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chrX_-_153252775_153252844	0.0537873	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg18_v1_chr1_-_16411690_16411752	0.0537338	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg18_v1_chr4_+_15292363_15292486	0.0537093	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr2_+_188865796_188865857	0.053701	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	CR619595|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr3_+_198961620_198961657	0.0536734	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr16_-_46976649_46976858	0.0536269	SOX2.p2	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr8_-_145132582_145132622	0.0536228	SOX2.p2	AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr4_-_54625528_54625581	0.053605	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	CR611915|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr3_+_180763380_180763427	0.0536023	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	CR602120|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	CR597700|ACTL6A|86|actin-like 6A	CR613774|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg18_v1_chr14_+_74353417_74353490	0.0535695	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg18_v1_chr4_+_155921876_155921949	0.0534013	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg18_v1_chr2_-_210726539_210726633	0.053327	SOX2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr6_-_32268267_32268419	0.0531782	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr17_-_60088773_60088881	0.0531338	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr8_+_69026895_69026917	0.0531181	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr6_+_39868116_39868119	0.0531145	SOX2.p2	
hg18_v1_chr12_+_74014685_74014774	0.0530679	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chr19_-_43995579_43995579	0.0530246	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg18_v1_chr1_-_157772420_157772465	0.0530123	SOX2.p2	NM_001004469|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5	BC137025|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5	BC137026|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5
hg18_v1_chr14_-_34414603_34414603	0.0529481	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr3_+_152970904_152970937	0.0528666	SOX2.p2	BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene
hg18_v1_chr11_+_69165018_69165056	0.0528281	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg18_v1_chr1_-_219977424_219977424	0.0527968	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg18_v1_chr6_-_25679197_25679277	0.0526493	SOX2.p2	
hg18_v1_chr2_-_39517633_39517794	0.0525989	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr10_+_126620681_126620681	0.052581	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr15_-_68128924_68129002	0.0523878	SOX2.p2	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr3_+_51837608_51837608	0.0522359	SOX2.p2	NM_001085479|IQCF3|401067|IQ motif containing F3
hg18_v1_chr11_-_85103438_85103438	0.0522293	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr5_+_170779664_170779808	0.0521563	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg18_v1_chr11_-_85108030_85108030	0.0521371	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr2_-_213724577_213724577	0.0520862	SOX2.p2	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chrX_-_100801472_100801518	0.0519493	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg18_v1_chr12_-_101398470_101398474	0.0518802	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_-_196751293_196751512	0.0518733	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg18_v1_chr4_-_186693574_186693705	0.0518572	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	CR605535|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	CR622133|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg18_v1_chr2_-_215998181_215998254	0.0518516	SOX2.p2	AF312399|FN1|2335|fibronectin 1
hg18_v1_chr6_+_17390273_17390273	0.0518146	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr2_+_61146542_61146622	0.0517887	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr15_+_55298908_55299010	0.0517547	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr15_-_48434896_48434896	0.051722	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr11_+_10786137_10786218	0.0517213	SOX2.p2	AK055888|LOC144017|144017|hypothetical protein LOC144017
hg18_v1_chr14_-_20642629_20642702	0.0514252	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg18_v1_chr6_-_139737432_139737476	0.051347	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr2_-_119840727_119840889	0.0513416	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg18_v1_chr8_+_32698892_32698977	0.0512646	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg18_v1_chr15_-_38118608_38118680	0.0512517	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chr19_+_54884252_54884373	0.0512352	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr6_+_142510108_142510123	0.0512086	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr12_-_9804682_9804763	0.0511964	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr20_-_55719946_55719946	0.0511762	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr8_-_67253234_67253399	0.0511553	SOX2.p2	CR619891|CRH|1392|corticotropin releasing hormone	CR626513|CRH|1392|corticotropin releasing hormone	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	CR603754|CRH|1392|corticotropin releasing hormone	CR592854|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	CR625216|CRH|1392|corticotropin releasing hormone	CR617485|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg18_v1_chr12_-_94135154_94135581	0.0510308	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg18_v1_chr21_+_26029602_26029672	0.0509768	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr20_-_33658823_33658850	0.0508888	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr13_+_30672122_30672298	0.0508808	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr2_-_215953818_215953973	0.0506724	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg18_v1_chr5_+_14493905_14493927	0.0505988	SOX2.p2	CR620371|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr14_+_71468902_71468911	0.0505021	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr2_-_55131124_55131138	0.0504391	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr14_+_103099031_103099097	0.0504256	SOX2.p2	NM_032374|C14orf153|84334|chromosome 14 open reading frame 153	CR619996|C14orf153|84334|chromosome 14 open reading frame 153	AK223092|C14orf153|84334|chromosome 14 open reading frame 153	AK223103|C14orf153|84334|chromosome 14 open reading frame 153	BC007412|C14orf153|84334|chromosome 14 open reading frame 153
hg18_v1_chr20_+_41519947_41520087	0.0503768	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	CR605163|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	CR606848|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr17_-_60088637_60088652	0.0502685	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr2_+_26924466_26924660	0.0502575	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5
hg18_v1_chr13_-_106018445_106018528	0.0501963	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg18_v1_chr5_-_22889192_22889215	0.050122	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr10_-_13430024_13430067	0.0500961	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr7_+_99537065_99537424	0.0500748	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR590642|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR611943|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR621800|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR595500|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR625474|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg18_v1_chr13_-_26232777_26232929	0.0500502	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg18_v1_chr7_+_73136254_73136286	0.0499942	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr1_-_115070413_115070531	0.0499873	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr15_-_53822468_53822569	0.0499476	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr15_+_20444164_20444192	0.0498651	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr4_+_86968069_86968088	0.0498302	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr1_-_13483073_13483141	0.0497296	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr10_+_118295417_118295594	0.0497165	SOX2.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg18_v1_chrX_+_73557809_73558134	0.0496715	SOX2.p2	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
hg18_v1_chr16_+_26985719_26985778	0.0496491	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg18_v1_chr10_-_99042348_99042380	0.0495686	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chrX_-_133758812_133758927	0.0494544	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr3_-_55496607_55496709	0.049448	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr17_-_44026042_44026157	0.0493717	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg18_v1_chr3_-_127258299_127258307	0.0492742	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr3_+_180763432_180763439	0.0492537	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A	CR594699|ACTL6A|86|actin-like 6A
hg18_v1_chr17_-_1478859_1478929	0.0491744	SOX2.p2	BC027923|SLC43A2|124935|solute carrier family 43, member 2	NM_152346|SLC43A2|124935|solute carrier family 43, member 2	BC071859|SLC43A2|124935|solute carrier family 43, member 2
hg18_v1_chr10_-_69422391_69422437	0.0491385	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg18_v1_chr19_-_10474266_10474611	0.0490614	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg18_v1_chr17_+_22982372_22982378	0.0489978	SOX2.p2	BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR616420|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr5_-_43638860_43639042	0.0489678	SOX2.p2	
hg18_v1_chr16_+_65620536_65620560	0.0489283	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr1_+_149493812_149493830	0.0488847	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr7_+_44762311_44762373	0.048875	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr19_+_60878238_60878380	0.0488574	SOX2.p2	NM_001130072|EPN1|29924|epsin 1	NM_013333|EPN1|29924|epsin 1
hg18_v1_chr17_+_71586857_71586943	0.0488249	SOX2.p2	AK122638|ZACN|353174|zinc activated ligand-gated ion channel	NM_180990|ZACN|353174|zinc activated ligand-gated ion channel	AF512521|ZACN|353174|zinc activated ligand-gated ion channel	BC110596|ZACN|353174|zinc activated ligand-gated ion channel	BC110597|ZACN|353174|zinc activated ligand-gated ion channel	AB223030|ZACN|353174|zinc activated ligand-gated ion channel
hg18_v1_chr3_-_71715431_71715905	0.0487216	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr1_+_159435728_159435728	0.0486977	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg18_v1_chr17_+_3993690_3993827	0.0486853	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	CR600228|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	CR621850|CYB5D2|124936|cytochrome b5 domain containing 2	CR592653|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr9_-_14076901_14077003	0.0484871	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr11_-_1728385_1728402	0.0484254	SOX2.p2	CR626060|LOC402778|402778|CD225 family protein FLJ76511
hg18_v1_chr3_-_3127057_3127057	0.0483588	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg18_v1_chr5_+_152850276_152850641	0.0482725	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg18_v1_chr3_+_99671013_99671110	0.0482326	SOX2.p2	BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1
hg18_v1_chr1_+_117345894_117345962	0.0482287	SOX2.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg18_v1_chr6_-_80001116_80001173	0.0481415	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR604353|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr12_+_52665196_52665310	0.048066	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	CR622939|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg18_v1_chr15_-_70385709_70385709	0.0480549	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr12_+_100795480_100795698	0.047986	SOX2.p2	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1	AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr22_+_25155220_25155428	0.0479289	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr2_-_98714020_98714070	0.0479156	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr10_-_93659164_93659237	0.047864	SOX2.p2	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3	BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3	AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3	NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3
hg18_v1_chr14_-_37795290_37795324	0.0478567	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr5_+_139008139_139008197	0.0478368	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr3_+_43303005_43303141	0.0478258	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr9_-_21218132_21218313	0.0477275	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg18_v1_chr1_+_149299530_149299554	0.0476248	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604855|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR612384|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608900|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR614314|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr2_-_47235929_47236020	0.0475949	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr15_+_20444124_20444136	0.0475933	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr17_-_3993047_3993072	0.0475909	SOX2.p2	AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr11_-_101292462_101292462	0.0475801	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg18_v1_chr2_-_152299229_152299246	0.0475464	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr7_-_35701287_35701320	0.0473885	SOX2.p2	NM_022373|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr17_-_34603577_34603661	0.0473376	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr9_+_135994734_135994817	0.0473264	SOX2.p2	AJ011376|WDR5|11091|WD repeat domain 5	NM_052821|WDR5|11091|WD repeat domain 5
hg18_v1_chr2_+_37425240_37425382	0.0472779	SOX2.p2	CR608310|QPCT|25797|glutaminyl-peptide cyclotransferase	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase	CR596088|QPCT|25797|glutaminyl-peptide cyclotransferase	CR623589|QPCT|25797|glutaminyl-peptide cyclotransferase
hg18_v1_chr21_-_39642808_39642873	0.0472466	SOX2.p2	BC071643|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619497|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619783|HMGN1|3150|high-mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high-mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high-mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr1_+_81544432_81544599	0.0472327	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg18_v1_chr2_+_176737050_176737050	0.0470233	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg18_v1_chr3_-_25680723_25681235	0.0468779	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr4_+_53975597_53975627	0.0467708	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr4_-_83570318_83570437	0.0467653	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr19_-_44920451_44920507	0.0465738	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chr17_-_24069299_24069412	0.0465516	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr12_+_46802695_46802829	0.0464675	SOX2.p2	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg18_v1_chr5_+_65258139_65258193	0.0464277	SOX2.p2	AF263744|ERBB2IP|55914|erbb2 interacting protein	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr2_+_27652892_27652896	0.0464184	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr19_-_49597594_49597623	0.0463389	SOX2.p2	AL833447|ZNF285|26974|zinc finger protein 285	AK302594|ZFP112|7771|zinc finger protein 112 homolog (mouse)	NM_152354|ZNF285|26974|zinc finger protein 285
hg18_v1_chr15_+_72861470_72861488	0.0462267	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase	CR620625|CSK|1445|c-src tyrosine kinase
hg18_v1_chr9_-_35101592_35101619	0.0461932	SOX2.p2	CR601417|KIAA1539|80256|KIAA1539
hg18_v1_chr5_-_142764295_142764424	0.0461806	SOX2.p2	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr2_+_218790364_218790438	0.0461654	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg18_v1_chr3_-_121117647_121117670	0.0461563	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr19_+_3523950_3523957	0.0460917	SOX2.p2	BC002552|HMG20B|10362|high-mobility group 20B	AK289500|HMG20B|10362|high-mobility group 20B	BC003505|HMG20B|10362|high-mobility group 20B
hg18_v1_chr2_+_148318520_148318654	0.0460117	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr1_+_190394214_190394390	0.0459928	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18	CR602825|RGS18|64407|regulator of G-protein signaling 18	DQ891393|RGS18|64407|regulator of G-protein signaling 18	DQ894569|RGS18|64407|regulator of G-protein signaling 18
hg18_v1_chr15_+_100163424_100163445	0.0459926	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr21_-_33709037_33709120	0.0458873	SOX2.p2	
hg18_v1_chr3_-_123766113_123766212	0.0458776	SOX2.p2	AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9
hg18_v1_chr8_+_24207524_24207581	0.0458618	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg18_v1_chr15_-_75364387_75364387	0.0457671	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr3_-_158703821_158703829	0.0456099	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr10_-_99042419_99042439	0.0456005	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chr2_-_202215593_202215684	0.0455782	SOX2.p2	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr6_+_129245978_129246034	0.0455346	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg18_v1_chr15_-_63185631_63185749	0.0454956	SOX2.p2	BC127916|LOC390595|390595|ubiquitin-associated protein 1-like	NM_001163692|LOC390595|390595|ubiquitin-associated protein 1-like
hg18_v1_chr5_+_43638495_43638698	0.0453491	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg18_v1_chr18_-_71050268_71050319	0.0452773	SOX2.p2	BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	CR610486|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr12_+_51729239_51729277	0.0452563	SOX2.p2	AK172747|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr14_-_76564727_76564899	0.0452484	SOX2.p2	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr5_-_134762764_134762783	0.0452105	SOX2.p2	CR624606|H2AFY|9555|H2A histone family, member Y	CR607311|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr21_-_41801778_41801937	0.0451997	SOX2.p2	AK291813|TMPRSS2|7113|transmembrane protease, serine 2	AK296860|TMPRSS2|7113|transmembrane protease, serine 2	NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2	BC051839|TMPRSS2|7113|transmembrane protease, serine 2	AF270487|TMPRSS2|7113|transmembrane protease, serine 2	BC035623|TMPRSS2|7113|transmembrane protease, serine 2
hg18_v1_chr3_-_115960807_115960813	0.0451852	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr19_+_56452775_56452775	0.0451021	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg18_v1_chr3_-_113842553_113842594	0.0450731	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr5_-_134762785_134762790	0.0449725	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y	CR624310|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr20_+_6696744_6696744	0.0449575	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg18_v1_chr1_+_246617532_246617532	0.0449385	SOX2.p2	NM_001005471|OR2T6|254879|olfactory receptor, family 2, subfamily T, member 6
hg18_v1_chr13_+_38510440_38510631	0.0447792	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	CR613108|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3	CR601315|NHLRC3|387921|NHL repeat containing 3
hg18_v1_chr17_-_53420595_53420639	0.0447732	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr9_+_126460511_126460540	0.0447593	SOX2.p2	
hg18_v1_chr17_-_45620911_45620925	0.0444831	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr5_+_72179685_72179709	0.0444609	SOX2.p2	NM_153188|TNPO1|3842|transportin 1
hg18_v1_chr17_+_45703765_45703765	0.0443654	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg18_v1_chr17_-_45621140_45621160	0.044226	SOX2.p2	
hg18_v1_chr7_+_68702516_68702532	0.0441932	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg18_v1_chr4_-_83771386_83771404	0.0441749	SOX2.p2	CR621269|SCD5|79966|stearoyl-CoA desaturase 5
hg18_v1_chr3_+_2528272_2528289	0.0440085	SOX2.p2	AK095729|CNTN4|152330|contactin 4
hg18_v1_chr1_+_246703249_246703274	0.0439165	SOX2.p2	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3
hg18_v1_chr17_-_10313600_10313600	0.0438669	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg18_v1_chr10_+_104995633_104995694	0.0438069	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg18_v1_chr2_-_151052391_151052429	0.0436523	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	CR626467|RND3|390|Rho family GTPase 3	CR607069|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg18_v1_chr16_+_65620715_65620864	0.0435289	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr14_+_51850754_51851016	0.0434898	SOX2.p2	NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa
hg18_v1_chr20_-_1548589_1548688	0.0433305	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg18_v1_chr2_+_204440753_204440910	0.0432353	SOX2.p2	NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4
hg18_v1_chr11_+_55842358_55842358	0.0432289	SOX2.p2	NM_001005202|OR8K3|219473|olfactory receptor, family 8, subfamily K, member 3
hg18_v1_chrX_+_46191567_46191744	0.0431335	SOX2.p2	NM_001129898|ZNF673|55634|zinc finger family member 673	NM_001129899|ZNF673|55634|zinc finger family member 673	NM_001129900|ZNF673|55634|zinc finger family member 673	NM_017776|ZNF673|55634|zinc finger family member 673	AK289703|ZNF673|55634|zinc finger family member 673	AK096413|ZNF673|55634|zinc finger family member 673	AK000351|ZNF673|55634|zinc finger family member 673
hg18_v1_chr12_+_100795213_100795286	0.0431131	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr7_-_99536929_99536965	0.0430698	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr13_-_29067584_29067658	0.0430618	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr1_-_150862202_150862202	0.0429619	SOX2.p2	AB528786|LCE3A|353142|late cornified envelope 3A	BC120933|LCE3A|353142|late cornified envelope 3A	BC120934|LCE3A|353142|late cornified envelope 3A	NM_178431|LCE3A|353142|late cornified envelope 3A
hg18_v1_chr13_+_47775901_47775944	0.0429279	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr12_-_110410730_110410798	0.0428619	SOX2.p2	CR619107|ATXN2|6311|ataxin 2
hg18_v1_chr9_+_91115924_91116027	0.0427897	SOX2.p2	CR621720|CKS2|1164|CDC28 protein kinase regulatory subunit 2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR601576|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg18_v1_chr15_-_84139182_84139216	0.0427654	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr8_-_81949570_81949570	0.0427425	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr12_+_97433541_97433544	0.0426728	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg18_v1_chr7_+_44754700_44754715	0.0426579	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr4_-_55686503_55686520	0.0426557	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg18_v1_chr19_+_977271_977327	0.0426394	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg18_v1_chr5_+_57823017_57823086	0.0426362	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr8_-_30635207_30635350	0.0426273	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR606311|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR626793|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR594329|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR606679|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr9_-_106420305_106420305	0.0425632	SOX2.p2	NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9
hg18_v1_chr13_+_47775888_47775897	0.0425587	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chr1_-_57661373_57661459	0.0425232	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg18_v1_chrX_-_47374647_47374647	0.0425172	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg18_v1_chr2_+_203207912_203207957	0.0424615	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr2_+_207512522_207512568	0.0424373	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg18_v1_chr3_-_114047479_114047486	0.0424048	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr7_-_102070473_102070551	0.04233	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like	CR625464|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2
hg18_v1_chr9_+_83748234_83748293	0.0423052	SOX2.p2	NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3
hg18_v1_chrX_-_63342209_63342394	0.0423047	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg18_v1_chr1_+_240078655_240078762	0.0422386	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr4_+_123311207_123311207	0.0421916	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr2_-_38683477_38683516	0.0421437	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr19_+_3523903_3523949	0.0421242	SOX2.p2	NM_006339|HMG20B|10362|high-mobility group 20B
hg18_v1_chr10_-_97311084_97311174	0.0421062	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr17_-_3992993_3993010	0.0420596	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr2_-_219614481_219614492	0.0420308	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg18_v1_chr2_-_55131176_55131197	0.0419804	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr15_+_66133709_66133721	0.0419675	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr4_-_72868598_72868805	0.0419671	SOX2.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr19_+_3523958_3523999	0.0417711	SOX2.p2	AK314201|HMG20B|10362|high-mobility group 20B	AK090733|HMG20B|10362|high-mobility group 20B	AK310601|HMG20B|10362|high-mobility group 20B	AF318366|HMG20B|10362|high-mobility group 20B
hg18_v1_chr2_+_189547358_189547368	0.0417644	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr5_+_139008209_139008493	0.0416936	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr6_+_139497933_139497965	0.0416375	SOX2.p2	BC070068|HECA|51696|headcase homolog (Drosophila)	AB033492|HECA|51696|headcase homolog (Drosophila)	NM_016217|HECA|51696|headcase homolog (Drosophila)
hg18_v1_chr17_-_45621571_45621615	0.0416089	SOX2.p2	J00112|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr19_+_10515591_10515765	0.0415242	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr4_+_78651929_78651930	0.041454	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg18_v1_chr5_+_69356827_69357015	0.0414434	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr3_-_55496370_55496374	0.0414299	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr22_+_36928011_36928092	0.0413894	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	CR606348|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	CR618179|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg18_v1_chr16_+_67130616_67130782	0.0413661	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr2_+_160180092_160180108	0.0413629	SOX2.p2	CR604974|LOC643072|643072|hypothetical LOC643072
hg18_v1_chr1_-_41399632_41399690	0.0413166	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr9_-_124329392_124329392	0.0413028	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg18_v1_chr12_-_52939584_52939599	0.0413015	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chrX_+_142794838_142794838	0.0412931	SOX2.p2	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg18_v1_chr4_-_122213018_122213143	0.0411542	SOX2.p2	BC019351|C4orf31|79625|chromosome 4 open reading frame 31	AK289615|C4orf31|79625|chromosome 4 open reading frame 31	NM_024574|C4orf31|79625|chromosome 4 open reading frame 31
hg18_v1_chr10_+_11247419_11247444	0.0411531	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr12_+_51728999_51729056	0.0410641	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chrX_-_106846684_106846886	0.0410181	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	CR599119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr19_-_7604569_7604633	0.0409088	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg18_v1_chr4_-_110843999_110844081	0.0408538	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg18_v1_chr1_-_43692134_43692246	0.0408408	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr21_+_26029393_26029402	0.0408099	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr22_-_48607199_48607341	0.0408032	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg18_v1_chr12_+_102859354_102859421	0.0407489	SOX2.p2	CR606918|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1
hg18_v1_chr14_+_76717835_76717855	0.040651	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg18_v1_chr2_+_100453375_100453375	0.0406289	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr14_-_49767840_49767861	0.0405993	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr11_-_5523328_5523354	0.0405962	SOX2.p2	NM_001005289|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1	BC136998|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1
hg18_v1_chr1_+_243199690_243199793	0.0405518	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr4_-_87500398_87500398	0.0404759	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr14_-_34414277_34414300	0.040399	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr17_+_22982319_22982342	0.0403185	SOX2.p2	AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr14_-_68689284_68689573	0.0402593	SOX2.p2	BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5	BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5	AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr1_-_157003095_157003115	0.0402339	SOX2.p2	NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1	BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1
hg18_v1_chr6_+_31604717_31604717	0.0402297	SOX2.p2	NM_001011700|MCCD1|401250|mitochondrial coiled-coil domain 1
hg18_v1_chr3_-_27500882_27500986	0.040207	SOX2.p2	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg18_v1_chr20_+_60558369_60558429	0.040158	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr4_-_140280031_140280055	0.0401392	SOX2.p2	AF256222|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)
hg18_v1_chr10_-_127361583_127361702	0.0399823	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	CR611441|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg18_v1_chr1_+_167342149_167342306	0.0399004	SOX2.p2	CR596103|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr21_-_46529663_46529703	0.0398294	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg18_v1_chr17_-_3992939_3992989	0.0398196	SOX2.p2	
hg18_v1_chr18_-_71050034_71050166	0.0398066	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr3_-_52287603_52287694	0.0397175	SOX2.p2	CR612750|WDR82|80335|WD repeat domain 82	CR616060|WDR82|80335|WD repeat domain 82
hg18_v1_chr16_-_70168449_70168498	0.0396701	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg18_v1_chr20_+_41519882_41519930	0.0396647	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr14_+_51396799_51396881	0.0396377	SOX2.p2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr4_+_39874921_39875152	0.0395807	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	CR619539|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	CR607001|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg18_v1_chr21_-_39642935_39642949	0.0395426	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr18_-_72858037_72858074	0.0395379	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg18_v1_chr5_-_176833197_176833256	0.0395265	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr17_+_22982383_22982414	0.0395035	SOX2.p2	CR598297|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR604285|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr7_+_129771865_129771936	0.0392702	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr5_+_156628929_156628939	0.0392431	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr5_-_1397941_1398104	0.0391286	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg18_v1_chr5_+_140494971_140495201	0.0389881	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr5_-_176833259_176833299	0.0389645	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr14_-_87529212_87529221	0.0389601	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg18_v1_chr9_-_122877231_122877272	0.0389451	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr1_+_149493861_149493886	0.0388995	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR609650|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR595476|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR608712|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR626776|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR611554|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR616606|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr14_-_60185659_60186027	0.0388877	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg18_v1_chr8_-_72919161_72919204	0.0387832	SOX2.p2	AF060154|MSC|9242|musculin
hg18_v1_chr4_-_57217226_57217444	0.0387007	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg18_v1_chr19_+_46462189_46462367	0.0386843	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr1_+_36046373_36046442	0.0386188	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr8_+_69027277_69027292	0.0385812	SOX2.p2	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr11_+_10836339_10836385	0.0385521	SOX2.p2	BC014360|LOC729013|729013|hypothetical LOC729013	BC036635|LOC729013|729013|hypothetical LOC729013
hg18_v1_chr3_-_47932479_47932615	0.0384631	SOX2.p2	
hg18_v1_chr21_+_26029542_26029597	0.0383804	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr13_+_47775887_47775887	0.0383063	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr10_-_69661860_69661860	0.0382031	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr6_+_62341966_62341966	0.0381697	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr11_-_128279670_128279809	0.0380843	SOX2.p2	DQ891644|C11orf45|219833|chromosome 11 open reading frame 45	DQ894833|C11orf45|219833|chromosome 11 open reading frame 45
hg18_v1_chr5_+_96237923_96237965	0.0380462	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg18_v1_chr21_+_36364168_36364288	0.0379979	SOX2.p2	CR594171|CBR1|873|carbonyl reductase 1	CR605960|CBR1|873|carbonyl reductase 1	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	CR607402|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1	CR604950|CBR1|873|carbonyl reductase 1
hg18_v1_chr18_-_42751305_42751518	0.0379819	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2
hg18_v1_chr2_+_85213884_85214457	0.0378909	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg18_v1_chrX_-_19918958_19919101	0.0378349	SOX2.p2	AY092822|LOC729609|729609|hypothetical LOC729609
hg18_v1_chr14_+_23710924_23710941	0.0377747	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg18_v1_chr16_-_1772305_1772567	0.0377724	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR622113|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR604082|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR596537|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR595592|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR592259|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR605628|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR610957|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR624932|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR591468|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr13_+_94883853_94883858	0.0377556	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg18_v1_chrX_+_147389825_147389935	0.0376565	SOX2.p2	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg18_v1_chr16_-_31068882_31068915	0.037642	SOX2.p2	BC137396|PRSS36|146547|protease, serine, 36	BC144615|PRSS36|146547|protease, serine, 36	AJ627034|PRSS36|146547|protease, serine, 36	AK075142|PRSS36|146547|protease, serine, 36	AK301409|PRSS36|146547|protease, serine, 36	AK290310|PRSS36|146547|protease, serine, 36	NM_173502|PRSS36|146547|protease, serine, 36
hg18_v1_chr3_+_188130967_188131040	0.0376294	SOX2.p2	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr10_-_102035938_102036103	0.0376269	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg18_v1_chr18_+_64616296_64616349	0.0376038	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg18_v1_chr16_+_1246273_1246282	0.0375187	SOX2.p2	NM_012217|TPSD1|23430|tryptase delta 1	BC069143|TPSD1|23430|tryptase delta 1
hg18_v1_chr15_+_54998181_54998207	0.0374513	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg18_v1_chr10_-_105100684_105100832	0.0373108	SOX2.p2	CR625113|PCGF6|84108|polycomb group ring finger 6	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr21_+_44856423_44856429	0.037304	SOX2.p2	AB076355|KRTAP10-8|386681|keratin associated protein 10-8	NM_198695|KRTAP10-8|386681|keratin associated protein 10-8	BC127016|KRTAP10-8|386681|keratin associated protein 10-8
hg18_v1_chr3_-_47180417_47180470	0.0372682	SOX2.p2	AK131371|SETD2|29072|SET domain containing 2	NM_014159|SETD2|29072|SET domain containing 2
hg18_v1_chr7_-_86526880_86526949	0.0372346	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr12_-_111114908_111114914	0.0371398	SOX2.p2	AF174498|C12orf51|283450|chromosome 12 open reading frame 51
hg18_v1_chr6_+_27215039_27215066	0.0371309	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	CR599017|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg18_v1_chr17_-_74433048_74433096	0.0370446	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr13_+_96884682_96884725	0.0369679	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr13_+_47775776_47775886	0.0369498	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr11_+_17714070_17714121	0.0369067	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg18_v1_chr12_+_53809731_53809819	0.0368958	SOX2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr1_-_239865724_239865854	0.0368726	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chr15_+_20444155_20444160	0.0368717	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr4_+_38740246_38740246	0.0368669	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr8_-_103206310_103206310	0.0368574	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg18_v1_chr22_-_35233032_35233095	0.0366203	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg18_v1_chr6_-_53034547_53034642	0.0365664	SOX2.p2	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr8_+_1436938_1436975	0.0365498	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr6_+_26070957_26071068	0.0364681	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr17_+_65582981_65583070	0.0364667	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr11_-_8147111_8147168	0.0364495	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chr20_-_13919256_13919261	0.0364238	SOX2.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg18_v1_chr10_-_44775142_44775164	0.0363151	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr15_+_75074793_75074972	0.0363145	SOX2.p2	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr6_+_41148691_41148710	0.0362491	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr1_-_23758503_23758640	0.0362187	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr14_-_106084519_106084523	0.0361842	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr12_-_11230809_11230809	0.0361832	SOX2.p2	BC131742|TAS2R42|353164|taste receptor, type 2, member 42	NM_181429|TAS2R42|353164|taste receptor, type 2, member 42
hg18_v1_chr8_+_60194328_60194331	0.0360633	SOX2.p2	
hg18_v1_chr15_-_68177283_68177312	0.0360627	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr1_-_180908639_180908689	0.0359493	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr8_+_17478214_17478214	0.0359317	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg18_v1_chr3_+_99555387_99555387	0.0358798	SOX2.p2	NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4
hg18_v1_chr14_+_51397166_51397206	0.0358692	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr17_-_34607257_34607505	0.0357992	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr8_-_7320013_7320013	0.0357682	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr17_-_77442753_77442757	0.035768	SOX2.p2	BC052302|THOC4|10189|THO complex 4	NM_005782|THOC4|10189|THO complex 4
hg18_v1_chr7_+_20008870_20008879	0.0357319	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr3_+_47819402_47819629	0.0356926	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr11_-_62539857_62539892	0.0356307	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg18_v1_chr7_+_26208532_26208632	0.0356141	SOX2.p2	
hg18_v1_chr5_-_134762791_134762810	0.0355986	SOX2.p2	CR597742|H2AFY|9555|H2A histone family, member Y	CR618845|H2AFY|9555|H2A histone family, member Y	CR600032|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr11_-_82460531_82460560	0.0355304	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr8_+_82355322_82355385	0.0355068	SOX2.p2	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg18_v1_chr22_+_19239221_19239393	0.0355008	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr20_+_43895802_43895965	0.0354825	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg18_v1_chr10_-_50402148_50402364	0.0354704	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr16_-_74086790_74086807	0.0353484	SOX2.p2	
hg18_v1_chr17_+_22982344_22982367	0.0352842	SOX2.p2	AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR602208|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr3_+_58198455_58198686	0.0352769	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6	CR589982|ABHD6|57406|abhydrolase domain containing 6
hg18_v1_chr10_+_11247467_11247530	0.0352338	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr4_-_57216816_57217013	0.0352159	SOX2.p2	AB019573|HOPX|84525|HOP homeobox	AM393649|HOPX|84525|HOP homeobox	DQ892193|HOPX|84525|HOP homeobox	EU176669|HOPX|84525|HOP homeobox	CR626269|HOPX|84525|HOP homeobox	CR600537|HOPX|84525|HOP homeobox
hg18_v1_chr20_-_118263_118321	0.0351286	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr2_-_110230927_110230939	0.0351265	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr9_+_139202874_139203020	0.0351032	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR620508|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR611889|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg18_v1_chr3_+_151747204_151747265	0.0350917	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr8_-_95556460_95556531	0.0350853	SOX2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr1_-_142559339_142559403	0.0350623	SOX2.p2	CR622951|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg18_v1_chr11_+_128067598_128067598	0.0350428	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr9_-_35062643_35062738	0.0350091	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg18_v1_chr21_+_37661063_37661169	0.0348746	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr2_-_75791501_75791618	0.0348697	SOX2.p2	BC064559|C2orf3|6936|chromosome 2 open reading frame 3	BC000853|C2orf3|6936|chromosome 2 open reading frame 3	EF158467|C2orf3|6936|chromosome 2 open reading frame 3	EF158468|C2orf3|6936|chromosome 2 open reading frame 3	AB026911|C2orf3|6936|chromosome 2 open reading frame 3	NM_003203|C2orf3|6936|chromosome 2 open reading frame 3
hg18_v1_chr2_+_79200995_79201094	0.0348487	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr4_+_144654005_144654352	0.0348067	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chr8_+_133856738_133856792	0.0348063	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr10_+_22674379_22674546	0.0347616	SOX2.p2	CR591720|SPAG6|9576|sperm associated antigen 6	AK302194|SPAG6|9576|sperm associated antigen 6	NM_012443|SPAG6|9576|sperm associated antigen 6	NM_172242|SPAG6|9576|sperm associated antigen 6	AF079363|SPAG6|9576|sperm associated antigen 6	AK310247|SPAG6|9576|sperm associated antigen 6	AK289903|SPAG6|9576|sperm associated antigen 6	AL080136|SPAG6|9576|sperm associated antigen 6	BC030585|SPAG6|9576|sperm associated antigen 6	AM392674|SPAG6|9576|sperm associated antigen 6	AM392698|SPAG6|9576|sperm associated antigen 6	DQ890916|SPAG6|9576|sperm associated antigen 6	DQ894067|SPAG6|9576|sperm associated antigen 6	CR533552|SPAG6|9576|sperm associated antigen 6
hg18_v1_chr7_-_99537362_99537502	0.0346893	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr2_-_100088760_100089021	0.0346885	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr3_-_161650294_161650341	0.0346804	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg18_v1_chr17_-_10265991_10265991	0.0346677	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr3_-_156876798_156876898	0.0346595	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg18_v1_chr3_-_52287297_52287564	0.0346483	SOX2.p2	AY358264|WDR82|80335|WD repeat domain 82	BX648628|WDR82|80335|WD repeat domain 82	AK291380|WDR82|80335|WD repeat domain 82
hg18_v1_chr11_-_62753574_62753699	0.0346306	SOX2.p2	AK127610|SLC22A25|387601|solute carrier family 22, member 25	BC101315|SLC22A25|387601|solute carrier family 22, member 25	BC101314|SLC22A25|387601|solute carrier family 22, member 25	AY437532|SLC22A25|387601|solute carrier family 22, member 25	BC101316|SLC22A25|387601|solute carrier family 22, member 25	BC101317|SLC22A25|387601|solute carrier family 22, member 25	NM_199352|SLC22A25|387601|solute carrier family 22, member 25
hg18_v1_chr15_+_46285789_46285790	0.0345512	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr5_+_177368294_177368294	0.0345236	SOX2.p2	NM_001079527|FAM153C|653316|family with sequence similarity 153, member C
hg18_v1_chr11_-_103539895_103540113	0.0344998	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg18_v1_chr12_+_20739555_20739982	0.0344979	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	CR594946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg18_v1_chr9_-_35105844_35105911	0.0344878	SOX2.p2	AK022837|KIAA1539|80256|KIAA1539	AK021622|KIAA1539|80256|KIAA1539	BC004406|KIAA1539|80256|KIAA1539	NM_025182|KIAA1539|80256|KIAA1539	AK307682|KIAA1539|80256|KIAA1539
hg18_v1_chr17_-_70039107_70039169	0.0344588	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr2_+_79201118_79201139	0.0344437	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr3_+_46591048_46591048	0.0344392	SOX2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg18_v1_chr6_+_167445284_167445284	0.0344243	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr19_+_54883732_54883753	0.0344188	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr13_-_47885248_47885264	0.0342933	SOX2.p2	BX537445|LPAR6|10161|lysophosphatidic acid receptor 6	AK123059|LPAR6|10161|lysophosphatidic acid receptor 6	BX537392|LPAR6|10161|lysophosphatidic acid receptor 6	BX537438|LPAR6|10161|lysophosphatidic acid receptor 6	BX647109|LPAR6|10161|lysophosphatidic acid receptor 6
hg18_v1_chr4_-_153675602_153675886	0.0342818	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg18_v1_chrX_+_44617346_44617414	0.0342777	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chr2_+_32356475_32356482	0.034266	SOX2.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr16_-_8870343_8870379	0.0342579	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg18_v1_chr22_-_40012133_40012174	0.0342243	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg18_v1_chr2_+_11213053_11213175	0.0341966	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3	CR602070|PQLC3|130814|PQ loop repeat containing 3	CR624863|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chrX_-_13866366_13866425	0.0341162	SOX2.p2	
hg18_v1_chr12_-_57600564_57600574	0.0339889	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg18_v1_chr10_-_105208634_105208637	0.0339364	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg18_v1_chr19_+_10515570_10515590	0.0338439	SOX2.p2	AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr9_+_83733162_83733221	0.0337521	SOX2.p2	NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4	AK125847|FAM75D4|389761|family with sequence similarity 75, member D4
hg18_v1_chr16_+_68890597_68890701	0.0337353	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR594442|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604580|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604732|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr17_+_72880831_72880866	0.0336939	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg18_v1_chr4_-_149582948_149583121	0.0336425	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr22_+_37823174_37823258	0.033621	SOX2.p2	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
hg18_v1_chr10_+_90414125_90414195	0.0335687	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr14_+_20222175_20222211	0.0335584	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr6_+_47857733_47857761	0.0333421	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5
hg18_v1_chr3_+_98641143_98641179	0.033319	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg18_v1_chr19_+_21116666_21116727	0.0332954	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg18_v1_chr4_+_83570980_83571006	0.0332393	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr3_-_195835593_195835712	0.0332061	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr8_+_103633023_103633052	0.0331617	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg18_v1_chr13_+_48582389_48582525	0.0331582	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr11_-_66070050_66070077	0.0330875	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg18_v1_chr14_-_57688669_57688685	0.0330754	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr3_+_188131209_188131334	0.0328797	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr3_+_180348818_180349046	0.0328073	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg18_v1_chr5_+_86599902_86599920	0.0328042	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr2_+_189547323_189547356	0.0327558	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr5_+_65258250_65258310	0.0326812	SOX2.p2	AF276423|ERBB2IP|55914|erbb2 interacting protein	BC050692|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr16_+_24696069_24696181	0.0326603	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr12_+_4700012_4700046	0.032655	SOX2.p2	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg18_v1_chr11_+_61005160_61005228	0.0325949	SOX2.p2	NM_001170753|C11orf66|220004|chromosome 11 open reading frame 66	NM_145017|C11orf66|220004|chromosome 11 open reading frame 66	AK057333|C11orf66|220004|chromosome 11 open reading frame 66	BC043246|C11orf66|220004|chromosome 11 open reading frame 66
hg18_v1_chr2_-_136311219_136311219	0.0325291	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr5_+_138116972_138117015	0.0325074	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr20_+_43691797_43691832	0.032499	SOX2.p2	CR598861|WFDC10A|140832|WAP four-disulfide core domain 10A	AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A	NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A	BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A
hg18_v1_chr3_-_127810087_127810087	0.0324913	SOX2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr17_-_30724732_30724832	0.0324849	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr5_+_140509803_140510022	0.0324672	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg18_v1_chr8_-_53484753_53484994	0.0324052	SOX2.p2	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg18_v1_chr10_+_129237602_129237602	0.0323663	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr2_-_50428395_50428457	0.032312	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr14_+_51397134_51397150	0.0322799	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr1_+_13615388_13615388	0.0322192	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr3_+_195888701_195888883	0.0322189	SOX2.p2	BC039689|FAM43A|131583|family with sequence similarity 43, member A	AK074503|FAM43A|131583|family with sequence similarity 43, member A	CR611019|FAM43A|131583|family with sequence similarity 43, member A
hg18_v1_chr4_+_52403922_52404165	0.03221	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg18_v1_chr5_+_140790141_140790268	0.0321365	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr4_+_113372287_113372780	0.0320995	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg18_v1_chr18_+_70352649_70352721	0.0320959	SOX2.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	CR610360|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr14_+_19458580_19458605	0.0319682	SOX2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr8_+_98725604_98725667	0.0318785	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg18_v1_chr14_+_61653827_61653949	0.0318169	SOX2.p2	CR626003|FLJ43390|646113|hypothetical LOC646113	BX248751|FLJ43390|646113|hypothetical LOC646113
hg18_v1_chr6_+_31838751_31838786	0.0318166	SOX2.p2	NM_001039651|C6orf26|401251|chromosome 6 open reading frame 26	BC137541|C6orf26|401251|chromosome 6 open reading frame 26	BC137542|C6orf26|401251|chromosome 6 open reading frame 26
hg18_v1_chr10_+_121400881_121400925	0.0317568	SOX2.p2	AK222800|BAG3|9531|BCL2-associated athanogene 3	BC006418|BAG3|9531|BCL2-associated athanogene 3	AF127139|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr13_-_45087859_45087874	0.0317082	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg18_v1_chr17_+_70964258_70964408	0.0316864	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg18_v1_chr11_+_117680504_117680877	0.0316317	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr2_-_142605739_142605739	0.0315947	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg18_v1_chr15_-_68177280_68177282	0.0315419	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr6_-_11340886_11340886	0.0315014	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr6_-_105957669_105957707	0.0314847	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg18_v1_chr12_-_47868563_47868740	0.0314688	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr4_-_100284395_100284473	0.0314504	SOX2.p2	M15943|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK290835|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK295556|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK313649|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	BC022319|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_000670|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide
hg18_v1_chr8_+_17824772_17824779	0.0314153	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg18_v1_chr1_-_158161924_158161963	0.0313971	SOX2.p2	CR621820|TAGLN2|8407|transgelin 2	CR601283|TAGLN2|8407|transgelin 2
hg18_v1_chr12_-_112394259_112394259	0.0313787	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg18_v1_chr17_+_40655060_40655226	0.0313724	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg18_v1_chr8_+_133856793_133856855	0.0313685	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chrX_-_151911260_151911416	0.0313593	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg18_v1_chr12_+_54106304_54106304	0.0312569	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chr15_+_72005875_72005880	0.0312318	SOX2.p2	CR618115|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr5_+_86599350_86599533	0.0311835	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr11_-_116605761_116605769	0.0310715	SOX2.p2	BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7
hg18_v1_chr8_+_145136571_145136631	0.0310599	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr4_+_68107039_68107122	0.0310415	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr5_-_95044415_95044469	0.0310005	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr6_-_11340887_11340906	0.0309796	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr5_-_138746840_138746901	0.030914	SOX2.p2	AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chr6_+_26071255_26071398	0.0309069	SOX2.p2	CR607808|TRIM38|10475|tripartite motif containing 38	CR936707|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr15_-_68177244_68177258	0.0307521	SOX2.p2	CR603419|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_+_178419938_178420212	0.0306287	SOX2.p2	BC063312|ZNF354C|30832|zinc finger protein 354C	AF525463|ZNF354C|30832|zinc finger protein 354C	NM_014594|ZNF354C|30832|zinc finger protein 354C
hg18_v1_chr8_+_64243741_64243767	0.0305916	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr19_+_11936868_11936896	0.0305672	SOX2.p2	AK092240|ZNF763|284390|zinc finger protein 763	AK299224|ZNF763|284390|zinc finger protein 763	NM_001012753|ZNF763|284390|zinc finger protein 763	BC105711|ZNF763|284390|zinc finger protein 763	BC105712|ZNF763|284390|zinc finger protein 763	BC105713|ZNF763|284390|zinc finger protein 763
hg18_v1_chr8_-_110689396_110689408	0.0305469	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr15_+_20444140_20444149	0.0305243	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr6_-_29120930_29120995	0.0304885	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr1_+_10412745_10412745	0.0304767	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr18_+_70317548_70317603	0.0304576	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr1_+_198263352_198263633	0.0304501	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg18_v1_chr3_-_38967055_38967055	0.0303852	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg18_v1_chr15_+_64372876_64373031	0.0303272	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr9_-_35101534_35101570	0.0302962	SOX2.p2	AB040972|KIAA1539|80256|KIAA1539
hg18_v1_chr12_-_30740011_30740064	0.0302921	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chr1_-_244647333_244647336	0.0302751	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr19_+_18357966_18357999	0.030251	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chr22_+_28609201_28609321	0.0301858	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr14_+_51397059_51397088	0.0301165	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr19_+_977627_977697	0.0300883	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	CR598250|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	CR611249|CNN2|1265|calponin 2	CR615042|CNN2|1265|calponin 2	CR618608|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	CR592852|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	CR606476|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg18_v1_chr3_+_151747266_151747286	0.0300726	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	CR601134|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr15_+_66133625_66133708	0.0300614	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr4_-_21308415_21308415	0.0300507	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr11_-_57752923_57752965	0.0300491	SOX2.p2	BC140731|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1	NM_001004471|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1
hg18_v1_chr7_+_136849104_136849182	0.0300283	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr9_-_96442351_96442367	0.0300251	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chrX_-_15242589_15242601	0.0300203	SOX2.p2	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr5_-_148422799_148422929	0.0300089	SOX2.p2	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2
hg18_v1_chr20_+_31219543_31219620	0.0299854	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr3_-_169295752_169295867	0.0299626	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr12_+_8557402_8557595	0.0298426	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg18_v1_chr18_+_74930398_74930477	0.0298137	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg18_v1_chr1_+_35623688_35623720	0.0298018	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg18_v1_chr3_-_62334229_62334229	0.029787	SOX2.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg18_v1_chr22_-_40012115_40012129	0.0297533	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg18_v1_chr8_-_110411283_110411338	0.0297135	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr10_+_91488704_91488791	0.0296846	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr4_-_77547481_77547481	0.0296677	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg18_v1_chr2_+_127130209_127130315	0.0296036	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr19_+_10932719_10932781	0.0294082	SOX2.p2	CR612486|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	CR597216|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr14_+_95899602_95899660	0.0293865	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr4_-_120462705_120462763	0.029346	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr5_+_140730014_140730145	0.0293123	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg18_v1_chr19_+_54530546_54530609	0.0293095	SOX2.p2	X14046|CD37|951|CD37 molecule	CR612129|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg18_v1_chr5_+_99898922_99899022	0.0292552	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	CR601145|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr11_-_63292688_63292857	0.0292066	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chr16_+_66464519_66464536	0.0291916	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr2_-_100088691_100088709	0.0291109	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr17_-_16038607_16038680	0.0291109	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr12_+_21059896_21059896	0.0291086	SOX2.p2	AF401642|LST-3TM12|338821|organic anion transporter LST-3b	NM_001009562|LST-3TM12|338821|organic anion transporter LST-3b
hg18_v1_chr5_+_96023479_96023535	0.029104	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg18_v1_chr6_+_64403668_64403683	0.0290988	SOX2.p2	AK307869|PHF3|23469|PHD finger protein 3
hg18_v1_chr7_+_80105907_80105971	0.0290964	SOX2.p2	CR606551|CD36|948|CD36 molecule (thrombospondin receptor)	CR623153|CD36|948|CD36 molecule (thrombospondin receptor)	CR598434|CD36|948|CD36 molecule (thrombospondin receptor)	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr11_+_4965996_4966015	0.0290954	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chrX_+_41191630_41191656	0.0290857	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg18_v1_chr14_-_75517198_75517250	0.0290787	SOX2.p2	AK313564|TGFB3|7043|transforming growth factor, beta 3	X14149|TGFB3|7043|transforming growth factor, beta 3	J03241|TGFB3|7043|transforming growth factor, beta 3
hg18_v1_chr15_-_63069280_63069318	0.0290643	SOX2.p2	CR597831|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR601212|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr7_-_44834702_44834741	0.0289934	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chr9_+_124463665_124463815	0.0289786	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg18_v1_chr13_-_102517196_102517196	0.0289088	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr10_-_123724631_123724692	0.0289037	SOX2.p2	
hg18_v1_chr12_-_18134319_18134380	0.028811	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	CR618874|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg18_v1_chr2_+_148318770_148318841	0.0286989	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr17_+_60563963_60564120	0.0286961	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	CR613211|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg18_v1_chr4_-_113777470_113777521	0.0286617	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr1_-_181826086_181826277	0.0286246	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	CR593013|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr8_-_30826074_30826149	0.0286185	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr17_+_72880967_72881074	0.0286057	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr8_-_103945566_103945576	0.028482	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg18_v1_chr11_+_59001421_59001478	0.0284577	SOX2.p2	BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10
hg18_v1_chr15_+_72005847_72005862	0.0284232	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr19_+_50086299_50086349	0.0284161	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr5_-_140033310_140033354	0.0283136	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg18_v1_chr6_-_47362102_47362179	0.0282665	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr14_+_74964672_74964860	0.0282407	SOX2.p2	NM_001135048|JDP2|122953|Jun dimerization protein 2	BC068196|JDP2|122953|Jun dimerization protein 2	NM_130469|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr12_-_110378240_110378372	0.0282397	SOX2.p2	
hg18_v1_chr3_-_55489973_55489995	0.0280929	SOX2.p2	BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr18_+_59521173_59521173	0.0280709	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg18_v1_chr14_-_73323629_73323715	0.0280246	SOX2.p2	NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43	BC009202|C14orf43|91748|chromosome 14 open reading frame 43
hg18_v1_chr12_-_116890410_116890410	0.0279967	SOX2.p2	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg18_v1_chr20_+_60151868_60152444	0.0279917	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg18_v1_chr6_-_88468703_88468711	0.0279655	SOX2.p2	AK001204|AKIRIN2|55122|akirin 2	NM_018064|AKIRIN2|55122|akirin 2
hg18_v1_chr9_+_124416768_124416837	0.0279571	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg18_v1_chr17_-_53420473_53420593	0.0279522	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr21_-_18697829_18697843	0.0279512	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr3_-_151746970_151747117	0.0279499	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg18_v1_chr15_+_69220841_69220887	0.0278808	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg18_v1_chr11_-_14336606_14336648	0.0278375	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr9_+_39345665_39345706	0.0278153	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr11_-_105398118_105398221	0.027815	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr19_+_57564981_57565025	0.0278148	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg18_v1_chr15_-_42790805_42790871	0.0277722	SOX2.p2	
hg18_v1_chr2_+_28828332_28828494	0.0277099	SOX2.p2	BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chr17_-_40865987_40866033	0.0276833	SOX2.p2	AK290650|SH3D20|201175|SH3 domain containing 20
hg18_v1_chr12_-_9913724_9913724	0.0276719	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr1_-_175400441_175400456	0.0276386	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg18_v1_chr12_-_55920741_55920793	0.0275708	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg18_v1_chr8_+_12914143_12914143	0.027509	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg18_v1_chr9_-_97309301_97309301	0.0274665	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr10_+_121400926_121400927	0.0274419	SOX2.p2	AK313026|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr14_+_54238581_54238697	0.0274055	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr10_+_17312654_17312716	0.0273731	SOX2.p2	CR609103|VIM|7431|vimentin
hg18_v1_chr17_-_33043514_33043613	0.0273502	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr14_+_89933055_89933098	0.0272133	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr12_+_97433536_97433540	0.0272113	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg18_v1_chr12_-_7709734_7709768	0.0272093	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg18_v1_chr11_+_131286513_131286585	0.0271745	SOX2.p2	EF043567|NTM|50863|neurotrimin	BC050716|NTM|50863|neurotrimin
hg18_v1_chr22_+_27994216_27994339	0.0271644	SOX2.p2	CR625247|EWSR1|2130|Ewing sarcoma breakpoint region 1	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604952|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR608375|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604639|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg18_v1_chr17_+_19492427_19493043	0.0271136	SOX2.p2	U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR591336|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2
hg18_v1_chr7_+_26404711_26404863	0.0270985	SOX2.p2	AK056484|LOC441204|441204|hypothetical locus LOC441204
hg18_v1_chr17_-_53387493_53387857	0.0270653	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg18_v1_chr1_-_156937065_156937109	0.0270628	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chr12_-_54965996_54966141	0.0270484	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg18_v1_chr10_+_98054074_98054242	0.0270477	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	CR597750|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg18_v1_chr9_-_96442377_96442390	0.0270325	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr5_+_180399871_180399971	0.0269958	SOX2.p2	AK298113|BTNL9|153579|butyrophilin-like 9	BC062459|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr14_-_21108714_21108714	0.0269548	SOX2.p2	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3
hg18_v1_chr10_-_50066386_50066479	0.0269516	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr13_+_109935250_109935280	0.0269468	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg18_v1_chr5_+_140703784_140703786	0.0269313	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr4_-_1655515_1655785	0.0268737	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	AK125566|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg18_v1_chr1_+_32777358_32777358	0.0268549	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr3_-_52248182_52248222	0.0268094	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR611569|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR593060|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR613911|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR602270|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR600187|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR607625|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR626408|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR596947|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR614000|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg18_v1_chr1_+_227506751_227506751	0.0267823	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr14_-_80757018_80757048	0.0267769	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg18_v1_chr9_+_35819208_35819279	0.0267767	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	CR608738|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr11_+_125730760_125730771	0.0267143	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr12_-_9651748_9651778	0.0266703	SOX2.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr6_-_53321545_53321652	0.0266554	SOX2.p2	AK125098|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	CR597148|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr5_-_114543632_114544141	0.0266526	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg18_v1_chr2_-_234317362_234317399	0.0266145	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr16_+_66464425_66464468	0.0266	SOX2.p2	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr2_+_84986510_84986652	0.0265789	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr19_-_60382529_60382569	0.0265626	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg18_v1_chr8_-_7710547_7710647	0.026528	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr11_-_58099884_58099965	0.0265233	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr19_+_57531309_57531422	0.0264834	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg18_v1_chr8_+_17824781_17824789	0.0264383	SOX2.p2	BC000453|PCM1|5108|pericentriolar material 1
hg18_v1_chr19_-_49725387_49725387	0.026431	SOX2.p2	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20
hg18_v1_chr1_-_201422490_201422532	0.0263665	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr2_-_210888010_210888158	0.0263608	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr19_-_21742162_21742269	0.0263445	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg18_v1_chr6_-_108688918_108688945	0.026305	SOX2.p2	CR601831|SNX3|8724|sorting nexin 3	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg18_v1_chr12_+_77963563_77963602	0.0262994	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr16_-_15741438_15741475	0.026288	SOX2.p2	BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr4_+_154293719_154293719	0.0262834	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr17_+_39280041_39280110	0.0262643	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg18_v1_chr15_+_72005864_72005872	0.026201	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr20_-_4752067_4752321	0.026197	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr22_+_16020241_16020288	0.0261893	SOX2.p2	AF307448|CECR4|100130717|cat eye syndrome chromosome region, candidate 4 (non-protein coding)
hg18_v1_chr10_+_123912930_123913001	0.0261481	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr3_+_198961020_198961158	0.0261039	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr2_+_198089036_198089082	0.0260806	SOX2.p2	AF093825|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF151853|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK307497|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AL080070|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AB015441|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK297514|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AJ580638|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	CR457371|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr5_-_142057692_142057818	0.0260777	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr14_-_57688560_57688659	0.02603	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr10_-_74863303_74863375	0.026014	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr11_+_122806196_122806424	0.0259891	SOX2.p2	CR599196|LOC100128242|100128242|hypothetical LOC100128242
hg18_v1_chr17_-_70039187_70039207	0.0259865	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr2_+_228064531_228064539	0.0259547	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr7_-_86433139_86433226	0.0259463	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr9_-_112139908_112139945	0.0259428	SOX2.p2	AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)
hg18_v1_chr3_+_47819631_47819689	0.025917	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr9_+_22103542_22103676	0.0259011	SOX2.p2	BC038540|CDKN2B-AS1|100048912|CDKN2B antisense RNA 1 (non-protein coding)
hg18_v1_chr10_+_80942362_80942362	0.0258709	SOX2.p2	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1	NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1
hg18_v1_chr11_+_22646229_22646229	0.0258638	SOX2.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg18_v1_chr10_-_123724698_123724802	0.0258029	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg18_v1_chr5_+_140537554_140537613	0.0257614	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg18_v1_chr13_-_47885018_47885245	0.0257386	SOX2.p2	AK223389|LPAR6|10161|lysophosphatidic acid receptor 6	BC070295|LPAR6|10161|lysophosphatidic acid receptor 6	BC054346|LPAR6|10161|lysophosphatidic acid receptor 6	CR597194|LPAR6|10161|lysophosphatidic acid receptor 6	BC040850|LPAR6|10161|lysophosphatidic acid receptor 6
hg18_v1_chr7_-_142769266_142769294	0.0257058	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg18_v1_chr8_+_64243662_64243735	0.0256654	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr4_+_83570749_83570788	0.0256035	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr9_+_122923864_122923914	0.025555	SOX2.p2	AK090600|CEP110|11064|centrosomal protein 110kDa	BC002932|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr12_-_52939636_52939640	0.025505	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chr7_+_44802798_44802826	0.025493	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR626590|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR618683|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR603867|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chrX_+_119379967_119380024	0.0254573	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg18_v1_chr5_+_82803248_82803499	0.02545	SOX2.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg18_v1_chr5_+_161208119_161208146	0.0254336	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr4_-_149577404_149577461	0.0254024	SOX2.p2	
hg18_v1_chr2_-_38683518_38683571	0.0253829	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr4_+_77575276_77575276	0.0253699	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr18_-_27518392_27518683	0.0253662	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg18_v1_chr18_-_31178415_31178423	0.0250688	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg18_v1_chr9_-_101621964_101622008	0.0250598	SOX2.p2	
hg18_v1_chr12_+_109390586_109390798	0.025041	SOX2.p2	AK296280|C12orf24|29902|chromosome 12 open reading frame 24	AK297684|C12orf24|29902|chromosome 12 open reading frame 24	NM_013300|C12orf24|29902|chromosome 12 open reading frame 24	CR623722|C12orf24|29902|chromosome 12 open reading frame 24	AK225731|C12orf24|29902|chromosome 12 open reading frame 24	CR602160|C12orf24|29902|chromosome 12 open reading frame 24	CR623239|C12orf24|29902|chromosome 12 open reading frame 24	U79274|C12orf24|29902|chromosome 12 open reading frame 24	BC020967|C12orf24|29902|chromosome 12 open reading frame 24
hg18_v1_chr5_-_36036883_36036886	0.0250358	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg18_v1_chr19_-_56223095_56223101	0.0249947	SOX2.p2	AB013730|KLK11|11012|kallikrein-related peptidase 11	BC022068|KLK11|11012|kallikrein-related peptidase 11	NM_001167605|KLK11|11012|kallikrein-related peptidase 11	NM_006853|KLK11|11012|kallikrein-related peptidase 11
hg18_v1_chr1_+_184532027_184532033	0.0249702	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr11_+_55554470_55554470	0.0248892	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr11_+_34029764_34029814	0.0248861	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr7_-_8268206_8268277	0.0248655	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr9_-_89939719_89939719	0.0248567	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg18_v1_chr17_+_69875140_69875239	0.0247917	SOX2.p2	BC143807|GPR142|350383|G protein-coupled receptor 142	AB196530|GPR142|350383|G protein-coupled receptor 142	AY288421|GPR142|350383|G protein-coupled receptor 142	NM_181790|GPR142|350383|G protein-coupled receptor 142
hg18_v1_chr11_-_74914066_74914246	0.024729	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chr2_-_55131202_55131237	0.0247185	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr19_-_41601303_41601419	0.0246807	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg18_v1_chr8_-_119192985_119193299	0.024665	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg18_v1_chr18_+_54681040_54681159	0.0246342	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr20_+_56904042_56904077	0.0245491	SOX2.p2	M77026|GNAS|2778|GNAS complex locus	CR604694|GNAS|2778|GNAS complex locus
hg18_v1_chr12_-_11313907_11313907	0.024521	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chr13_+_110565587_110565874	0.0244937	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr1_+_119712918_119713016	0.0244559	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chrX_-_114374860_114374890	0.024429	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chr7_+_107008439_107008453	0.0243484	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chrX_+_153318662_153318794	0.0243447	SOX2.p2	AK294893|GDI1|2664|GDP dissociation inhibitor 1	AK295306|GDI1|2664|GDP dissociation inhibitor 1	AK303248|GDI1|2664|GDP dissociation inhibitor 1	AL833629|GDI1|2664|GDP dissociation inhibitor 1	AK090746|GDI1|2664|GDP dissociation inhibitor 1	BC012201|GDI1|2664|GDP dissociation inhibitor 1	X79353|GDI1|2664|GDP dissociation inhibitor 1	BC000317|GDI1|2664|GDP dissociation inhibitor 1	D45021|GDI1|2664|GDP dissociation inhibitor 1	AF400433|GDI1|2664|GDP dissociation inhibitor 1	AM392660|GDI1|2664|GDP dissociation inhibitor 1	AM393226|GDI1|2664|GDP dissociation inhibitor 1	AM393601|GDI1|2664|GDP dissociation inhibitor 1	DQ892049|GDI1|2664|GDP dissociation inhibitor 1	DQ895243|GDI1|2664|GDP dissociation inhibitor 1	DQ896843|GDI1|2664|GDP dissociation inhibitor 1	AB102647|GDI1|2664|GDP dissociation inhibitor 1	BT019884|GDI1|2664|GDP dissociation inhibitor 1	CR542258|GDI1|2664|GDP dissociation inhibitor 1	CR542276|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr8_-_30635112_30635132	0.0243301	SOX2.p2	CR611388|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr4_+_71713324_71713324	0.0242907	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg18_v1_chr14_+_66725862_66725930	0.0242807	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg18_v1_chr2_-_208736533_208736610	0.024215	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg18_v1_chr2_+_169465995_169466046	0.0242076	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg18_v1_chr3_-_48344834_48344834	0.0241761	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr21_+_40161216_40161278	0.0241681	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg18_v1_chr6_+_118976134_118976183	0.0241595	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr8_+_107529327_107529327	0.0241423	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr5_+_140780797_140780978	0.0240825	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr6_-_105957651_105957651	0.0240185	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg18_v1_chr22_+_42908589_42908589	0.0240129	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg18_v1_chrX_-_148604506_148604506	0.0239911	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr12_-_30740072_30740195	0.0239803	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr19_+_977624_977625	0.0238877	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr18_+_21967813_21967880	0.0238706	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg18_v1_chr10_-_28631850_28632026	0.0238514	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr5_+_140160966_140160966	0.0238309	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr3_-_25681394_25681401	0.0238101	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr2_-_55131157_55131175	0.0237993	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr11_-_125730622_125730642	0.023768	SOX2.p2	
hg18_v1_chr8_-_52884456_52884557	0.0237509	SOX2.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg18_v1_chr3_+_198960820_198960820	0.0236803	SOX2.p2	AK303462|FYTTD1|84248|forty-two-three domain containing 1	NM_001011537|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr8_+_7731402_7731402	0.0236576	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr19_-_47623340_47623417	0.0236424	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg18_v1_chr15_-_61680003_61680188	0.0236228	SOX2.p2	BC017581|LOC100130855|100130855|hypothetical LOC100130855	BC036918|LOC100130855|100130855|hypothetical LOC100130855	AK093077|LOC100130855|100130855|hypothetical LOC100130855
hg18_v1_chr1_+_24158898_24158969	0.0236061	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr1_-_210070736_210070771	0.0236056	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr14_+_78815406_78815508	0.0235682	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg18_v1_chr7_-_120285364_120285428	0.0235575	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr1_-_205210567_205210592	0.0235542	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr8_-_17315171_17315230	0.0235471	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr5_-_134762695_134762732	0.023523	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr14_-_49767690_49767776	0.023418	SOX2.p2	L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr6_-_33864883_33864894	0.023402	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg18_v1_chr13_+_32488477_32488570	0.0233842	SOX2.p2	AB005142|KL|9365|klotho	NM_004795|KL|9365|klotho
hg18_v1_chr15_-_63199228_63199345	0.023358	SOX2.p2	BT007395|PDCD7|10081|programmed cell death 7	BC016992|PDCD7|10081|programmed cell death 7
hg18_v1_chr9_-_85512311_85512427	0.0233465	SOX2.p2	CR612259|UBQLN1|29979|ubiquilin 1	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg18_v1_chr2_-_24160683_24160756	0.0233179	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	CR619579|TP53I3|9540|tumor protein p53 inducible protein 3
hg18_v1_chr15_+_72005839_72005845	0.0232822	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr6_-_50045296_50045296	0.0232217	SOX2.p2	DQ012017|DEFB113|245927|defensin, beta 113	NM_001037729|DEFB113|245927|defensin, beta 113
hg18_v1_chr5_+_70980724_70980762	0.0231878	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg18_v1_chr7_+_94130673_94130691	0.0231674	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr7_-_99536852_99536928	0.0231296	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr5_-_133775491_133775506	0.0231244	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr6_+_41148869_41148938	0.0230675	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr3_-_52287695_52287698	0.0230448	SOX2.p2	NM_025222|WDR82|80335|WD repeat domain 82
hg18_v1_chr6_-_133008834_133008858	0.0230201	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg18_v1_chr19_-_63722732_63722798	0.0230139	SOX2.p2	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45	NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chrX_-_46289765_46289835	0.022986	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg18_v1_chr14_-_20922001_20922018	0.0229656	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	CR616669|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr3_-_187138527_187138617	0.0229578	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr20_-_57940567_57940603	0.0229238	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg18_v1_chr6_+_123142559_123142638	0.0229183	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr18_+_12298242_12298289	0.0229052	SOX2.p2	AK022340|TUBB6|84617|tubulin, beta 6	AK098440|TUBB6|84617|tubulin, beta 6	AK304616|TUBB6|84617|tubulin, beta 6	BC002654|TUBB6|84617|tubulin, beta 6	CR607214|TUBB6|84617|tubulin, beta 6	NM_032525|TUBB6|84617|tubulin, beta 6	AK298196|TUBB6|84617|tubulin, beta 6	CR593665|TUBB6|84617|tubulin, beta 6	CR593961|TUBB6|84617|tubulin, beta 6	CR594370|TUBB6|84617|tubulin, beta 6	DQ893486|TUBB6|84617|tubulin, beta 6	DQ896394|TUBB6|84617|tubulin, beta 6
hg18_v1_chr2_+_132196533_132196533	0.0228985	SOX2.p2	AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A	NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A
hg18_v1_chr7_+_93373755_93373755	0.0228912	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg18_v1_chr7_-_27158726_27158741	0.0228833	SOX2.p2	
hg18_v1_chr22_+_29122932_29123101	0.0228766	SOX2.p2	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR607299|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg18_v1_chr3_-_87408301_87408426	0.0228657	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chrX_-_140614227_140614320	0.0227606	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg18_v1_chr3_-_123223658_123223816	0.0227489	SOX2.p2	AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1	BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1
hg18_v1_chr8_-_145099963_145100075	0.0227259	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg18_v1_chr8_+_17824790_17824816	0.0227181	SOX2.p2	BC065022|PCM1|5108|pericentriolar material 1	BC027477|PCM1|5108|pericentriolar material 1	BC140946|PCM1|5108|pericentriolar material 1
hg18_v1_chr16_+_31632078_31632127	0.0226417	SOX2.p2	CR611323|ZNF720|124411|zinc finger protein 720	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg18_v1_chr17_+_73511843_73511912	0.0226376	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr8_+_118032370_118032398	0.0226214	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr17_-_60088459_60088600	0.0226064	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr5_-_172976259_172976299	0.0225923	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr1_+_68070573_68070579	0.0225395	SOX2.p2	
hg18_v1_chr4_-_77147625_77147685	0.022504	SOX2.p2	BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9	NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9	X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9	AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9
hg18_v1_chr2_+_211129567_211129702	0.0224627	SOX2.p2	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr14_-_105279582_105279607	0.0224573	SOX2.p2	
hg18_v1_chr4_-_166253374_166253448	0.0224571	SOX2.p2	BC036301|TMEM192|201931|transmembrane protein 192	BX648915|TMEM192|201931|transmembrane protein 192	BX538029|TMEM192|201931|transmembrane protein 192
hg18_v1_chr14_-_20921925_20922000	0.0223837	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr2_-_161058120_161058290	0.0223764	SOX2.p2	D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr5_+_140532385_140532600	0.022372	SOX2.p2	AK315054|PCDHB7|56129|protocadherin beta 7	AK222560|PCDHB7|56129|protocadherin beta 7	AK024641|PCDHB7|56129|protocadherin beta 7	NM_018940|PCDHB7|56129|protocadherin beta 7	AK222678|PCDHB7|56129|protocadherin beta 7	BC098574|PCDHB7|56129|protocadherin beta 7	BC130331|PCDHB7|56129|protocadherin beta 7	BC130333|PCDHB7|56129|protocadherin beta 7	AF152500|PCDHB7|56129|protocadherin beta 7	AF217750|PCDHB7|56129|protocadherin beta 7
hg18_v1_chr16_+_49333513_49333605	0.0223679	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr5_+_99899133_99899205	0.0223569	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr15_-_48434641_48434653	0.0223507	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr7_-_122126422_122126445	0.0223219	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg18_v1_chr18_+_54681657_54682014	0.0222909	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr7_-_94791763_94791819	0.0222347	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg18_v1_chr2_-_27187467_27187473	0.0222181	SOX2.p2	AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1	NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1
hg18_v1_chr11_-_55757236_55757312	0.0222138	SOX2.p2	NM_001004746|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2	BC136876|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2
hg18_v1_chr1_-_12830728_12830899	0.0221363	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr15_+_32048380_32048380	0.0221195	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr13_-_29937966_29938021	0.0221129	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr17_+_22982278_22982312	0.0221005	SOX2.p2	CR614567|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr19_+_61607194_61607194	0.0220464	SOX2.p2	NM_001159860|ZNF583|147949|zinc finger protein 583
hg18_v1_chr5_+_140757787_140757878	0.0220396	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr14_-_34413831_34413888	0.0220147	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr14_+_95899541_95899594	0.022013	SOX2.p2	CR608981|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr3_+_14835472_14835472	0.0219995	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg18_v1_chr14_+_49430109_49430204	0.0219994	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr8_-_22841173_22841365	0.0219957	SOX2.p2	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4	BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4	NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4
hg18_v1_chr1_-_174442999_174443000	0.0219937	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr2_+_32356492_32356576	0.0219798	SOX2.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr3_-_198960964_198960964	0.0219676	SOX2.p2	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr18_-_75812640_75812641	0.0219146	SOX2.p2	AK301881|PQLC1|80148|PQ loop repeat containing 1	NM_001146343|PQLC1|80148|PQ loop repeat containing 1	NM_001146345|PQLC1|80148|PQ loop repeat containing 1	NM_025078|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr3_-_193928038_193928081	0.0218822	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr1_-_153916221_153916243	0.0218747	SOX2.p2	AK303386|YY1AP1|55249|YY1 associated protein 1	NM_001198899|YY1AP1|55249|YY1 associated protein 1
hg18_v1_chr2_+_17798860_17798924	0.0218505	SOX2.p2	CR936783|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	NM_001130009|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	AK093631|LOC284952|284952|hypothetical protein LOC284952
hg18_v1_chr19_+_46462169_46462170	0.0218313	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr5_-_172976212_172976257	0.0218192	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr7_+_116182676_116182699	0.0217711	SOX2.p2	
hg18_v1_chr2_-_225073357_225073435	0.0217601	SOX2.p2	CR603582|CUL3|8452|cullin 3
hg18_v1_chr2_+_48698440_48698518	0.0217409	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg18_v1_chr15_+_75074483_75074608	0.0216888	SOX2.p2	AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	CR593209|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg18_v1_chr3_+_99370233_99370233	0.02164	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr14_-_106289751_106290256	0.0216392	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr11_-_117589283_117589283	0.0216338	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr12_+_53177758_53177786	0.0216211	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr3_-_120861959_120862126	0.0215994	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg18_v1_chr5_+_86599982_86600036	0.021586	SOX2.p2	
hg18_v1_chr6_-_53321658_53321702	0.0215817	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr20_+_35407872_35407970	0.0215398	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg18_v1_chr12_+_6915698_6915737	0.0214937	SOX2.p2	
hg18_v1_chr1_-_1613802_1613848	0.0214719	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg18_v1_chr10_+_86121526_86121671	0.0214315	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr1_-_201422450_201422458	0.0214218	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr7_-_94791670_94791751	0.0213297	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg18_v1_chrX_+_153318452_153318533	0.0212724	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr7_+_44802691_44802793	0.0212655	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR594762|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr7_+_116289827_116289828	0.0212531	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr19_-_11477395_11477659	0.0211872	SOX2.p2	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg18_v1_chr1_+_198449278_198449278	0.0211733	SOX2.p2	NM_001105517|FAM58B|339521|family with sequence similarity 58, member B
hg18_v1_chr20_-_23755297_23755367	0.0211111	SOX2.p2	NM_001322|CST2|1470|cystatin SA	BC062679|CST2|1470|cystatin SA
hg18_v1_chr8_+_69027166_69027208	0.0211095	SOX2.p2	AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr14_+_71065794_71065794	0.0211051	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr5_-_176671437_176671544	0.0210686	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	CR613684|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	CR626344|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr8_-_27171852_27171897	0.0210493	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg18_v1_chr19_-_51856129_51856292	0.0210209	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr13_+_97593469_97593505	0.0210131	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr1_-_245237952_245237957	0.0210017	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr4_-_84150997_84151040	0.0209961	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr5_+_147754467_147754532	0.0209852	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg18_v1_chr14_-_72430545_72430578	0.0209599	SOX2.p2	AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3	EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3	NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3
hg18_v1_chrX_+_27736027_27736045	0.0209462	SOX2.p2	AK057527|MAGEB10|139422|melanoma antigen family B, 10	NM_182506|MAGEB10|139422|melanoma antigen family B, 10	BC101307|MAGEB10|139422|melanoma antigen family B, 10	BC101309|MAGEB10|139422|melanoma antigen family B, 10	BC101310|MAGEB10|139422|melanoma antigen family B, 10
hg18_v1_chr10_+_35455806_35455963	0.0207579	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg18_v1_chr19_+_977608_977612	0.0207443	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg18_v1_chr19_-_4293718_4293782	0.0207092	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg18_v1_chr14_+_89933118_89933244	0.0206998	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR592381|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR618763|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR590380|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR591035|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR604747|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR619428|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR595745|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR626701|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr12_+_63849606_63849637	0.0206767	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg18_v1_chr3_-_145049853_145050062	0.020672	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr6_+_131613196_131613400	0.020644	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr4_+_95898098_95898161	0.0206215	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg18_v1_chr1_-_201422436_201422448	0.0206074	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	CR602274|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr14_+_51397113_51397115	0.0206071	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_-_38683572_38683581	0.0206054	SOX2.p2	BC008217|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr4_+_83570789_83570838	0.0205828	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	CR615673|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	CR623426|ENOPH1|58478|enolase-phosphatase 1	CR593619|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr14_-_49652944_49653097	0.0205824	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	CR597030|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg18_v1_chr10_-_33663984_33664025	0.0204746	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg18_v1_chr1_+_157824239_157824335	0.0204635	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr5_+_138117017_138117044	0.0204569	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr13_+_48923688_48923775	0.0204532	SOX2.p2	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg18_v1_chr16_+_66484671_66484776	0.0204198	SOX2.p2	AK309272|PSKH1|5681|protein serine kinase H1	NM_006742|PSKH1|5681|protein serine kinase H1	BC062616|PSKH1|5681|protein serine kinase H1	AJ272212|PSKH1|5681|protein serine kinase H1
hg18_v1_chr12_+_54316910_54316942	0.0203908	SOX2.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr17_+_71772982_71773002	0.0203765	SOX2.p2	CR616618|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr19_+_10652025_10652071	0.0203729	SOX2.p2	
hg18_v1_chr1_-_101132833_101132878	0.0203518	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr10_+_11247449_11247455	0.0202434	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr14_-_105279740_105279770	0.0202246	SOX2.p2	
hg18_v1_chr9_+_135314907_135315013	0.0202208	SOX2.p2	NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7	NM_017586|C9orf7|11094|chromosome 9 open reading frame 7	AK075416|C9orf7|11094|chromosome 9 open reading frame 7	AK304524|C9orf7|11094|chromosome 9 open reading frame 7	AK074852|C9orf7|11094|chromosome 9 open reading frame 7	AK311325|C9orf7|11094|chromosome 9 open reading frame 7	AK296343|C9orf7|11094|chromosome 9 open reading frame 7	AK075548|C9orf7|11094|chromosome 9 open reading frame 7	BC030558|C9orf7|11094|chromosome 9 open reading frame 7	AJ011373|C9orf7|11094|chromosome 9 open reading frame 7	AY358452|C9orf7|11094|chromosome 9 open reading frame 7	AK298820|C9orf7|11094|chromosome 9 open reading frame 7
hg18_v1_chr12_-_45506001_45506046	0.0202202	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg18_v1_chr12_+_108636569_108636572	0.0202184	SOX2.p2	NM_032829|C12orf34|84915|chromosome 12 open reading frame 34	BC020193|C12orf34|84915|chromosome 12 open reading frame 34
hg18_v1_chr16_-_67039874_67040091	0.0201887	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg18_v1_chr8_-_103735194_103735343	0.0201827	SOX2.p2	BC011538|KLF10|7071|Kruppel-like factor 10	NM_001032282|KLF10|7071|Kruppel-like factor 10	S81439|KLF10|7071|Kruppel-like factor 10
hg18_v1_chr6_-_47361921_47361962	0.0201765	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr6_-_31960735_31960765	0.0201589	SOX2.p2	CR624754|EHMT2|10919|euchromatic histone-lysine N-methyltransferase 2
hg18_v1_chr7_-_23020257_23020294	0.0201013	SOX2.p2	CR626024|FAM126A|84668|family with sequence similarity 126, member A	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg18_v1_chr19_+_11569234_11569349	0.0200607	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg18_v1_chrX_+_77052834_77052864	0.0200481	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr15_-_84139021_84139181	0.0200029	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr16_+_65196133_65196152	0.0199915	SOX2.p2	CR598427|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR615620|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR619122|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR618108|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr9_-_35062545_35062569	0.0199528	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg18_v1_chr4_+_113777568_113777568	0.0199448	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr10_+_32896656_32896769	0.0199136	SOX2.p2	AK023093|C10orf68|79741|chromosome 10 open reading frame 68	NM_024688|C10orf68|79741|chromosome 10 open reading frame 68	BC125090|C10orf68|79741|chromosome 10 open reading frame 68	BC125091|C10orf68|79741|chromosome 10 open reading frame 68
hg18_v1_chrX_+_106057984_106058114	0.0198805	SOX2.p2	AY358474|CLDN2|9075|claudin 2	BC014424|CLDN2|9075|claudin 2	DQ892216|CLDN2|9075|claudin 2	DQ895412|CLDN2|9075|claudin 2	AF250558|CLDN2|9075|claudin 2
hg18_v1_chr12_+_115833093_115833245	0.0198767	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg18_v1_chr18_+_31074985_31075104	0.0198623	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr17_+_63338500_63338579	0.0198349	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr16_-_22293097_22293496	0.0198092	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chrX_+_133952633_133952722	0.0197854	SOX2.p2	BC008642|LOC644538|644538|hypothetical protein LOC644538	NM_001163438|LOC644538|644538|hypothetical protein LOC644538
hg18_v1_chr5_+_86599800_86599845	0.0197693	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr13_-_71338144_71338376	0.019702	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr7_-_35701253_35701276	0.0196869	SOX2.p2	BC020264|HERPUD2|64224|HERPUD family member 2	AK055708|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr12_+_5473558_5473641	0.019648	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr13_-_51922731_51922806	0.019619	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr9_-_76692829_76692829	0.0195409	SOX2.p2	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg18_v1_chr17_-_60988226_60988234	0.0195149	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg18_v1_chr14_-_49170407_49170486	0.01951	SOX2.p2	BC013322|C14orf104|55172|chromosome 14 open reading frame 104	BX248264|C14orf104|55172|chromosome 14 open reading frame 104	CR619602|C14orf104|55172|chromosome 14 open reading frame 104	BC011400|C14orf104|55172|chromosome 14 open reading frame 104	AK001425|C14orf104|55172|chromosome 14 open reading frame 104
hg18_v1_chr17_+_35728039_35728062	0.0195005	SOX2.p2	AK292205|RARA|5914|retinoic acid receptor, alpha	FJ487576|RARA|5914|retinoic acid receptor, alpha
hg18_v1_chr8_-_103945521_103945550	0.0194851	SOX2.p2	AK095493|AZIN1|51582|antizyme inhibitor 1	D88674|AZIN1|51582|antizyme inhibitor 1	BC013420|AZIN1|51582|antizyme inhibitor 1	BC019279|AZIN1|51582|antizyme inhibitor 1
hg18_v1_chr2_-_210876560_210876597	0.0194658	SOX2.p2	X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	CR598137|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr10_+_103815114_103815152	0.0194597	SOX2.p2	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg18_v1_chr5_-_16989371_16989400	0.0194588	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg18_v1_chr14_-_79748273_79748277	0.0194281	SOX2.p2	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	NM_013989|DIO2|1734|deiodinase, iodothyronine, type II
hg18_v1_chr7_-_50485515_50485581	0.0194267	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg18_v1_chr14_+_75141557_75141557	0.0194151	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr1_+_151456683_151456683	0.0193758	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr13_-_23369124_23369193	0.0193595	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr5_+_140790310_140790352	0.0193443	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr5_-_147191334_147191392	0.0193249	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr15_-_54997964_54998093	0.0192163	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr8_+_31616809_31616809	0.0191963	SOX2.p2	NM_013962|NRG1|3084|neuregulin 1
hg18_v1_chr16_-_56886380_56886451	0.0191599	SOX2.p2	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr3_-_184363157_184363360	0.0191019	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg18_v1_chr2_+_32356460_32356473	0.0190778	SOX2.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr5_-_132327090_132327128	0.0190518	SOX2.p2	BC063007|AFF4|27125|AF4/FMR2 family, member 4	BC025700|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr4_+_169250281_169250426	0.0190311	SOX2.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chr15_+_78483624_78483954	0.019003	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chr9_+_35819375_35819581	0.0189883	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr7_-_104949787_104950008	0.0188795	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr17_-_60988077_60988206	0.0188772	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg18_v1_chr16_-_52295214_52295303	0.0188467	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr11_-_55492514_55492565	0.0188352	SOX2.p2	NM_001005491|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136890|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136891|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1
hg18_v1_chr5_+_134237808_134238094	0.0188142	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	CR616649|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	CR613338|TXNDC15|79770|thioredoxin domain containing 15	CR613370|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	CR601239|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg18_v1_chr22_+_36422940_36422956	0.0188097	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg18_v1_chr17_+_25730048_25730083	0.0188061	SOX2.p2	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg18_v1_chr3_-_48931821_48931821	0.0187326	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg18_v1_chr12_+_43896134_43896142	0.0187303	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg18_v1_chr2_-_162808123_162808290	0.0186609	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chrX_+_119622570_119622611	0.0186282	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr7_-_33068699_33068996	0.0185747	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr11_+_6823458_6823489	0.0185318	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg18_v1_chr9_+_126158935_126159046	0.0185249	SOX2.p2	
hg18_v1_chr5_+_133479196_133479325	0.0185207	SOX2.p2	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)
hg18_v1_chr5_-_156502363_156502498	0.0184987	SOX2.p2	NM_001100816|MED7|9443|mediator complex subunit 7	AF031383|MED7|9443|mediator complex subunit 7	CR617029|MED7|9443|mediator complex subunit 7	BC005250|MED7|9443|mediator complex subunit 7	BC006968|MED7|9443|mediator complex subunit 7	AK308393|MED7|9443|mediator complex subunit 7	NM_004270|MED7|9443|mediator complex subunit 7
hg18_v1_chr15_-_62782470_62782502	0.018491	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr7_+_23496661_23496723	0.0184653	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg18_v1_chr8_+_61592278_61592331	0.0184481	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr10_+_12431714_12431732	0.0184272	SOX2.p2	BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg18_v1_chr1_+_12900031_12900099	0.0184	SOX2.p2	BC144565|PRAMEF7|441871|PRAME family member 7	NM_001012277|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr8_-_30060029_30060200	0.018392	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	CR625035|TMEM66|51669|transmembrane protein 66	CR604656|TMEM66|51669|transmembrane protein 66	CR592958|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	CR609979|TMEM66|51669|transmembrane protein 66	CR610452|TMEM66|51669|transmembrane protein 66	CR603787|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	CR607306|TMEM66|51669|transmembrane protein 66	CR622883|TMEM66|51669|transmembrane protein 66	CR604748|TMEM66|51669|transmembrane protein 66	CR612155|TMEM66|51669|transmembrane protein 66	CR615477|TMEM66|51669|transmembrane protein 66	CR596584|TMEM66|51669|transmembrane protein 66	CR603460|TMEM66|51669|transmembrane protein 66	CR622782|TMEM66|51669|transmembrane protein 66	CR616524|TMEM66|51669|transmembrane protein 66	CR592722|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	CR613232|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	CR605556|TMEM66|51669|transmembrane protein 66	CR609363|TMEM66|51669|transmembrane protein 66	CR613264|TMEM66|51669|transmembrane protein 66	CR622956|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	CR608346|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg18_v1_chr6_-_35764655_35764713	0.0183552	SOX2.p2	BC111050|FKBP5|2289|FK506 binding protein 5	AK222807|FKBP5|2289|FK506 binding protein 5	AK302704|FKBP5|2289|FK506 binding protein 5	AK303356|FKBP5|2289|FK506 binding protein 5	AK312422|FKBP5|2289|FK506 binding protein 5	BX647390|FKBP5|2289|FK506 binding protein 5	NM_001145776|FKBP5|2289|FK506 binding protein 5	AF194172|FKBP5|2289|FK506 binding protein 5	U71321|FKBP5|2289|FK506 binding protein 5	NM_001145777|FKBP5|2289|FK506 binding protein 5	NM_004117|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr3_-_153470022_153470049	0.0183465	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr6_-_30762957_30762971	0.0182871	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr19_+_46462176_46462187	0.018252	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr3_+_213430_213469	0.0181523	SOX2.p2	AB209329|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg18_v1_chr1_+_64012154_64012341	0.018138	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg18_v1_chr1_-_246525502_246525502	0.0181332	SOX2.p2	NM_001004692|OR2T12|127064|olfactory receptor, family 2, subfamily T, member 12
hg18_v1_chr19_+_977601_977605	0.0181285	SOX2.p2	CR592088|CNN2|1265|calponin 2	CR602855|CNN2|1265|calponin 2	CR607371|CNN2|1265|calponin 2
hg18_v1_chr1_+_10413016_10413144	0.0181118	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr16_+_65196125_65196129	0.017978	SOX2.p2	CR621105|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR625182|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr19_-_63301402_63301411	0.0179636	SOX2.p2	AK296417|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr10_+_70650064_70650110	0.0179586	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg18_v1_chr3_+_48931248_48931272	0.0178922	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr5_-_135259403_135259414	0.0178477	SOX2.p2	BC066283|IL9|3578|interleukin 9	BC066284|IL9|3578|interleukin 9	BC066285|IL9|3578|interleukin 9	BC066286|IL9|3578|interleukin 9	BC066287|IL9|3578|interleukin 9	M30134|IL9|3578|interleukin 9	NM_000590|IL9|3578|interleukin 9	S63356|IL9|3578|interleukin 9	X17543|IL9|3578|interleukin 9
hg18_v1_chr5_+_176492629_176492643	0.0177981	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr20_+_31783426_31783488	0.0177548	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341
hg18_v1_chr6_-_53321706_53321901	0.0177458	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr1_-_184696839_184696861	0.017742	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr1_+_10381671_10381761	0.0176943	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	CR607764|PGD|5226|phosphogluconate dehydrogenase	CR610062|PGD|5226|phosphogluconate dehydrogenase	CR610133|PGD|5226|phosphogluconate dehydrogenase	CR609478|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	CR610891|PGD|5226|phosphogluconate dehydrogenase	CR608757|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg18_v1_chr12_-_73889777_73889777	0.0176019	SOX2.p2	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg18_v1_chr3_+_45705918_45705961	0.0175926	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg18_v1_chr6_+_148705817_148705952	0.0175903	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr22_-_16020153_16020167	0.0175645	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR601915|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR606299|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr3_-_184363126_184363141	0.0175394	SOX2.p2	DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3
hg18_v1_chr3_+_103636548_103636566	0.0175347	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg18_v1_chr5_-_96504194_96504202	0.0174984	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr16_-_74086426_74086426	0.0174323	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg18_v1_chr1_-_84237316_84237453	0.0174233	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr22_-_16020076_16020152	0.0174217	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr22_-_30885200_30885308	0.017411	SOX2.p2	BC139845|C22orf42|150297|chromosome 22 open reading frame 42	CR456485|C22orf42|150297|chromosome 22 open reading frame 42	NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42	BC040263|C22orf42|150297|chromosome 22 open reading frame 42
hg18_v1_chr7_-_96489884_96489918	0.0174106	SOX2.p2	
hg18_v1_chr7_-_13995811_13995848	0.0174061	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg18_v1_chr8_-_133140808_133140808	0.0173669	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr15_-_32833980_32834073	0.017333	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg18_v1_chr2_+_203901160_203901600	0.017296	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr12_-_85756766_85756811	0.0172164	SOX2.p2	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg18_v1_chr11_-_6148131_6148213	0.0171887	SOX2.p2	NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2
hg18_v1_chr5_+_156625629_156626032	0.0171678	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	CR596909|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr20_-_43732291_43732322	0.0171532	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg18_v1_chr1_+_22200735_22200753	0.0171274	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg18_v1_chr19_-_48815572_48815607	0.0171249	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg18_v1_chr16_-_67723511_67723562	0.0171082	SOX2.p2	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr2_+_210152399_210152432	0.017051	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr2_-_108972100_108972259	0.0170201	SOX2.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg18_v1_chr5_+_57914658_57914695	0.0169741	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg18_v1_chr19_+_46462125_46462168	0.0169645	SOX2.p2	CR594584|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr17_-_39796649_39796847	0.0169642	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg18_v1_chrX_-_111953009_111953009	0.0169533	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg18_v1_chrX_-_39921525_39921525	0.0169475	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg18_v1_chr5_-_27074407_27074449	0.0169337	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg18_v1_chr2_-_152740387_152740806	0.0169138	SOX2.p2	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg18_v1_chr1_+_86943103_86943182	0.016876	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr17_+_62803824_62803918	0.0168722	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg18_v1_chr8_+_144838608_144838649	0.016852	SOX2.p2	NM_001100598|ZNF707|286075|zinc finger protein 707	NM_001100599|ZNF707|286075|zinc finger protein 707	NM_173831|ZNF707|286075|zinc finger protein 707	AK001126|ZNF707|286075|zinc finger protein 707	AK290432|ZNF707|286075|zinc finger protein 707	AK055198|ZNF707|286075|zinc finger protein 707	AK055263|ZNF707|286075|zinc finger protein 707	BC014894|ZNF707|286075|zinc finger protein 707
hg18_v1_chrX_+_100111352_100111352	0.0168393	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg18_v1_chr22_+_40724674_40724768	0.0168261	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg18_v1_chr11_+_125730822_125730878	0.0167945	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr20_+_29931257_29931292	0.0167852	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg18_v1_chr10_+_91082218_91082309	0.0167649	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	CR618361|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg18_v1_chr20_-_30795463_30795474	0.0167629	SOX2.p2	AK096307|COMMD7|149951|COMM domain containing 7	BC022073|COMMD7|149951|COMM domain containing 7	NM_001099339|COMMD7|149951|COMM domain containing 7	NM_053041|COMMD7|149951|COMM domain containing 7
hg18_v1_chrX_-_37916138_37916147	0.0167547	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chrX_+_46289871_46289906	0.0167501	SOX2.p2	BC034616|LOC401588|401588|hypothetical LOC401588	AK056314|LOC401588|401588|hypothetical LOC401588	CR619110|LOC401588|401588|hypothetical LOC401588
hg18_v1_chr6_+_45404031_45404037	0.0167494	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg18_v1_chr2_-_160277083_160277221	0.0166971	SOX2.p2	BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr15_-_23659962_23660025	0.0166969	SOX2.p2	AB051358|ATP10A|57194|ATPase, class V, type 10A
hg18_v1_chr13_-_25693821_25693873	0.0166815	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr3_+_46258875_46258966	0.0166278	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg18_v1_chr17_+_25730086_25730098	0.0166032	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg18_v1_chr15_-_47042932_47042932	0.0165861	SOX2.p2	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4
hg18_v1_chr10_-_33663305_33663614	0.0165722	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	CR593940|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg18_v1_chr11_+_6898780_6898808	0.0165678	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg18_v1_chr1_-_174442987_174442997	0.0165621	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr1_+_23990228_23990297	0.0165593	SOX2.p2	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr1_-_152847301_152847347	0.0165301	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg18_v1_chr3_+_30623376_30623439	0.0165249	SOX2.p2	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr20_-_29457650_29457729	0.0164919	SOX2.p2	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg18_v1_chr5_+_140790365_140790389	0.0164916	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr15_-_42743124_42743148	0.0164632	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr8_+_118216517_118216517	0.0164489	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr1_-_1614040_1614114	0.0164449	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr21_+_39739663_39739667	0.0164129	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg18_v1_chr1_+_110361634_110361667	0.0163703	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr12_+_30970882_30970973	0.0163682	SOX2.p2	AK293947|TSPAN11|441631|tetraspanin 11
hg18_v1_chr3_-_155630197_155630197	0.0163475	SOX2.p2	DQ318360|GPR149|344758|G protein-coupled receptor 149	NM_001038705|GPR149|344758|G protein-coupled receptor 149
hg18_v1_chr8_+_38704860_38704860	0.0163461	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr19_-_17432724_17432762	0.0163433	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg18_v1_chr1_-_108544261_108544325	0.0163302	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg18_v1_chr1_-_181826292_181826381	0.0162967	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr7_+_116289765_116289821	0.0162653	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr10_-_95452301_95452350	0.0162407	SOX2.p2	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR621041|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR625507|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg18_v1_chr1_+_165565006_165565121	0.0161896	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr7_+_73136042_73136082	0.0161658	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr21_-_26029830_26029854	0.0161632	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chr2_+_190723216_190723216	0.0161477	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr6_-_53034445_53034538	0.0161445	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr7_+_80105858_80105901	0.0161224	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr14_-_69896146_69896200	0.0161006	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chrX_+_110226030_110226084	0.0160477	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg18_v1_chr1_-_110949867_110949867	0.0160306	SOX2.p2	NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg18_v1_chr9_-_35062596_35062636	0.0160071	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg18_v1_chr1_+_148532885_148532964	0.0159943	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	CR610321|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg18_v1_chr5_+_140481583_140481605	0.0159873	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr6_-_52882419_52882454	0.0159859	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	CR601508|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg18_v1_chr12_-_86947276_86947306	0.0158997	SOX2.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr3_+_61522922_61523111	0.0158759	SOX2.p2	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G
hg18_v1_chr14_+_38719462_38719593	0.0158664	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr14_+_61231795_61232091	0.0158167	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg18_v1_chr14_-_69896056_69896142	0.0158078	SOX2.p2	CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR594391|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR603105|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chr15_-_48434677_48434692	0.0158071	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr4_-_107508040_107508040	0.0157623	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg18_v1_chr15_-_21483457_21483495	0.0157136	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr2_+_45022540_45022561	0.0157057	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg18_v1_chr4_-_40911212_40911440	0.0156948	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr7_+_37689903_37689911	0.0156708	SOX2.p2	
hg18_v1_chr12_-_120781002_120781151	0.0156658	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg18_v1_chr6_-_139737477_139737477	0.015665	SOX2.p2	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr1_-_198645455_198645609	0.0156526	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg18_v1_chr17_-_2977594_2977708	0.0156406	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg18_v1_chr10_-_1769669_1769717	0.0156394	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg18_v1_chr1_+_209586328_209586328	0.0156316	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr2_+_114935623_114935649	0.0155999	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr9_+_35031101_35031101	0.0155901	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr2_+_160277273_160277300	0.0155609	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr1_+_32251988_32252183	0.0155503	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr11_+_26972203_26972234	0.0155461	SOX2.p2	NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr18_-_58946858_58946972	0.0155406	SOX2.p2	AF401211|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chr20_-_29774258_29774397	0.015506	SOX2.p2	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg18_v1_chr12_-_90100710_90100715	0.0154759	SOX2.p2	AL355731|DCN|1634|decorin	CR613885|DCN|1634|decorin	CR616358|DCN|1634|decorin
hg18_v1_chr17_-_35337288_35337428	0.0154563	SOX2.p2	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	CR620858|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)
hg18_v1_chr5_+_90711887_90711949	0.0154446	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr3_+_157071173_157071353	0.0154433	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr16_+_68890559_68890596	0.0154355	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR593012|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR625899|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr20_-_21326046_21326182	0.0154353	SOX2.p2	NM_033176|NKX2-4|644524|NK2 homeobox 4
hg18_v1_chr17_-_77421980_77422078	0.0154163	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr11_+_111551417_111551688	0.0153946	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr8_-_30060003_30060027	0.0153934	SOX2.p2	CR597672|TMEM66|51669|transmembrane protein 66	CR608849|TMEM66|51669|transmembrane protein 66	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg18_v1_chr4_+_53986759_53986864	0.015364	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr11_+_75769984_75770159	0.0153457	SOX2.p2	BC040665|LOC387790|387790|hypothetical LOC387790	AK095089|LOC387790|387790|hypothetical LOC387790
hg18_v1_chr3_-_14964620_14964663	0.0153376	SOX2.p2	
hg18_v1_chr7_+_77005287_77005321	0.015288	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr1_-_13204251_13204278	0.0152852	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22	NM_001013692|PRAMEF3|401940|PRAME family member 3
hg18_v1_chr17_+_72827968_72828003	0.0152769	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg18_v1_chrX_-_117134652_117134855	0.0152503	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr5_-_41546384_41546486	0.0152371	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr1_-_200879203_200879203	0.0152117	SOX2.p2	AK094430|SYT2|127833|synaptotagmin II	NM_001136504|SYT2|127833|synaptotagmin II
hg18_v1_chr3_-_95264756_95264756	0.0151918	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr4_+_42590038_42590039	0.015176	SOX2.p2	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1
hg18_v1_chr11_-_10630408_10630498	0.0151575	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr17_-_7996409_7996482	0.0151315	SOX2.p2	AB088477|PER1|5187|period homolog 1 (Drosophila)	AF022991|PER1|5187|period homolog 1 (Drosophila)	AK291061|PER1|5187|period homolog 1 (Drosophila)	NM_002616|PER1|5187|period homolog 1 (Drosophila)
hg18_v1_chr5_+_140481763_140481764	0.0151308	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr11_+_60448487_60448535	0.0151298	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg18_v1_chr3_+_23822481_23822531	0.0151148	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr3_+_38470782_38470813	0.0150384	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr18_-_31178379_31178414	0.0150234	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg18_v1_chr1_+_104093962_104094088	0.0150069	SOX2.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr3_+_185520744_185520900	0.0149815	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr20_+_41628150_41628150	0.0149477	SOX2.p2	AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg18_v1_chr6_+_41148665_41148690	0.0149142	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr3_+_95264513_95264555	0.0149056	SOX2.p2	CR594640|NSUN3|63899|NOP2/Sun domain family, member 3	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg18_v1_chr17_+_39503623_39503837	0.0149034	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR624359|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR601615|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR595523|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR623861|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607320|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR613351|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR590248|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR609384|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598130|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR608514|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR597546|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR622205|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR625794|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR615676|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR619652|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598996|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR591259|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR605360|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607017|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg18_v1_chr1_+_92268072_92268224	0.0148998	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg18_v1_chr1_+_150937463_150937463	0.0148903	SOX2.p2	BC119707|LCE2A|353139|late cornified envelope 2A	BC127647|LCE2A|353139|late cornified envelope 2A	NM_178428|LCE2A|353139|late cornified envelope 2A
hg18_v1_chr2_+_160277219_160277263	0.0148363	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr11_+_36572615_36572746	0.014833	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr1_+_200449905_200449905	0.0148261	SOX2.p2	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6
hg18_v1_chr8_-_27524744_27524854	0.0147632	SOX2.p2	M25915|CLU|1191|clusterin	BX648414|CLU|1191|clusterin	NM_203339|CLU|1191|clusterin
hg18_v1_chr2_-_110230822_110230887	0.0147552	SOX2.p2	AK311353|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr22_-_43272567_43272997	0.0147448	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr5_+_180582880_180582895	0.0147253	SOX2.p2	AK027601|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr22_-_30072217_30072314	0.0147196	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr22_-_16020168_16020190	0.0147055	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr1_-_159369081_159369101	0.0145695	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr1_-_201422368_201422433	0.0144967	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr11_-_85053807_85053874	0.0144955	SOX2.p2	BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor	NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor
hg18_v1_chr14_+_23590939_23591093	0.0144873	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg18_v1_chr4_+_156899575_156899733	0.0144807	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr22_+_42908548_42908567	0.0144676	SOX2.p2	AK307299|PARVG|64098|parvin, gamma
hg18_v1_chr3_+_150065732_150065784	0.0144394	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg18_v1_chr22_-_39923412_39923459	0.014395	SOX2.p2	
hg18_v1_chr4_+_72078255_72078416	0.0143835	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr8_-_27171814_27171844	0.0143018	SOX2.p2	CR591479|STMN4|81551|stathmin-like 4	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg18_v1_chr1_+_100590595_100590615	0.0142933	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr1_-_1667123_1667353	0.0142694	SOX2.p2	BC062371|SLC35E2|9906|solute carrier family 35, member E2	CR591109|SLC35E2|9906|solute carrier family 35, member E2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr1_-_117465872_117465936	0.014231	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	CR595070|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45	CR602755|TRIM45|80263|tripartite motif containing 45
hg18_v1_chrX_+_77052879_77052918	0.0142252	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chrX_-_100999204_100999204	0.0142173	SOX2.p2	AJ277654|NXF5|55998|nuclear RNA export factor 5	AJ277655|NXF5|55998|nuclear RNA export factor 5	AJ277656|NXF5|55998|nuclear RNA export factor 5	AJ277657|NXF5|55998|nuclear RNA export factor 5	AJ277658|NXF5|55998|nuclear RNA export factor 5	NM_032946|NXF5|55998|nuclear RNA export factor 5
hg18_v1_chr10_-_127397990_127398058	0.0142114	SOX2.p2	AK094354|FLJ37035|399821|hypothetical LOC399821
hg18_v1_chr3_-_187138500_187138518	0.014181	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr4_-_157006827_157006874	0.0141716	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr7_+_44802834_44802848	0.0141445	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR609623|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR613992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr19_+_18391423_18391457	0.0140983	SOX2.p2	
hg18_v1_chr7_-_99612757_99612970	0.0140972	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr11_+_33235743_33235980	0.0140545	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr12_-_12310969_12311250	0.014049	SOX2.p2	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr9_+_107464558_107464598	0.0140004	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr15_+_89061579_89061658	0.0139732	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg18_v1_chr1_-_85514580_85514867	0.0138916	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg18_v1_chr1_-_1614005_1614031	0.0138758	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr1_-_1157221_1157234	0.0138707	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	CR597574|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4	CR616274|SDF4|51150|stromal cell derived factor 4	CR624179|SDF4|51150|stromal cell derived factor 4	CR626225|SDF4|51150|stromal cell derived factor 4	CR612176|SDF4|51150|stromal cell derived factor 4	CR626721|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr13_-_101852028_101852124	0.0138135	SOX2.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg18_v1_chr9_-_113130533_113130533	0.0138026	SOX2.p2	BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2	NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2
hg18_v1_chr6_-_33864863_33864875	0.0137976	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg18_v1_chr8_+_17986647_17986656	0.013794	SOX2.p2	
hg18_v1_chr7_+_123083096_123083251	0.0137543	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chr2_-_100088224_100088476	0.0137292	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr1_+_1104939_1104972	0.0137036	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr6_-_91063181_91063284	0.0136763	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr6_+_170457705_170457761	0.0136677	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr17_-_74432800_74433047	0.0136559	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr9_-_35062578_35062592	0.0136308	SOX2.p2	CR606334|VCP|7415|valosin containing protein
hg18_v1_chrX_-_74659982_74660000	0.0136169	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr18_+_75354312_75354424	0.0135731	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg18_v1_chr11_+_18390421_18390506	0.0135315	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg18_v1_chr5_-_134762738_134762758	0.0135231	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr2_-_241408296_241408397	0.0134614	SOX2.p2	NM_004321|KIF1A|547|kinesin family member 1A	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A
hg18_v1_chr17_+_77261477_77261501	0.0134485	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr2_+_3605611_3605640	0.0134468	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg18_v1_chr19_-_40411418_40411471	0.0134393	SOX2.p2	BC039080|FAM187B|148109|family with sequence similarity 187, member B	AK098526|FAM187B|148109|family with sequence similarity 187, member B	NM_152481|FAM187B|148109|family with sequence similarity 187, member B	BC117457|FAM187B|148109|family with sequence similarity 187, member B	BC117459|FAM187B|148109|family with sequence similarity 187, member B
hg18_v1_chr3_+_2117246_2117246	0.0134173	SOX2.p2	AY090737|CNTN4|152330|contactin 4	NM_175607|CNTN4|152330|contactin 4
hg18_v1_chr14_-_105206106_105206249	0.0133605	SOX2.p2	
hg18_v1_chr3_+_130641639_130641761	0.0133346	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr15_-_24513004_24513004	0.0133184	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr19_+_977582_977598	0.0132332	SOX2.p2	AK295271|CNN2|1265|calponin 2	CR603928|CNN2|1265|calponin 2
hg18_v1_chr2_+_39746141_39746141	0.013221	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr2_+_176677479_176677495	0.0132146	SOX2.p2	
hg18_v1_chr16_-_65774904_65774980	0.0132067	SOX2.p2	AK094787|KIAA0895L|653319|KIAA0895-like	AK096855|KIAA0895L|653319|KIAA0895-like	BC080183|KIAA0895L|653319|KIAA0895-like
hg18_v1_chr1_-_201422533_201422565	0.0131949	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr2_-_110230642_110230746	0.0131618	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr12_-_109390390_109390436	0.0131415	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr10_+_112317401_112317563	0.0131344	SOX2.p2	NM_005445|SMC3|9126|structural maintenance of chromosomes 3	AK315845|SMC3|9126|structural maintenance of chromosomes 3	AK289771|SMC3|9126|structural maintenance of chromosomes 3	AF020043|SMC3|9126|structural maintenance of chromosomes 3	BC047324|SMC3|9126|structural maintenance of chromosomes 3
hg18_v1_chr18_-_72857951_72858016	0.0131193	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	CR620021|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	CR596562|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	CR608490|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein	CR594138|MBP|4155|myelin basic protein
hg18_v1_chr13_-_25693927_25694027	0.0130853	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr16_+_49333461_49333510	0.0130537	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr1_-_17179694_17179779	0.01302	SOX2.p2	BC028033|MFAP2|4237|microfibrillar-associated protein 2	CR619947|MFAP2|4237|microfibrillar-associated protein 2	CR597163|MFAP2|4237|microfibrillar-associated protein 2	AK222751|MFAP2|4237|microfibrillar-associated protein 2	CR590231|MFAP2|4237|microfibrillar-associated protein 2	BC015039|MFAP2|4237|microfibrillar-associated protein 2	NM_001135248|MFAP2|4237|microfibrillar-associated protein 2	NM_002403|MFAP2|4237|microfibrillar-associated protein 2
hg18_v1_chr2_-_217248967_217249092	0.0129769	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr4_-_149582754_149582825	0.0129535	SOX2.p2	BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr12_+_54132264_54132264	0.012947	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr3_+_48931276_48931299	0.0129409	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr9_-_98368913_98369023	0.0129247	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr4_+_187227302_187227344	0.0129213	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg18_v1_chr15_+_99276982_99277089	0.0128981	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg18_v1_chr2_-_208598452_208598567	0.0128529	SOX2.p2	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3	NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3
hg18_v1_chr2_-_190357241_190357317	0.0128067	SOX2.p2	CR620006|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr1_+_26973804_26973947	0.0127932	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr17_+_34574844_34574863	0.0127885	SOX2.p2	AK093715|LOC284108|284108|hypothetical protein LOC284108
hg18_v1_chr10_+_102662675_102662856	0.0127699	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr5_+_121675672_121675842	0.0127559	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr11_-_5494391_5494531	0.0127408	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chr7_+_97679501_97679554	0.0127074	SOX2.p2	BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15	BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15	NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15
hg18_v1_chr2_-_3583793_3583799	0.0127012	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chr12_+_30971104_30971158	0.0127	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg18_v1_chr3_+_185521139_185521176	0.0126865	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr1_-_24179419_24179539	0.0126312	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr20_+_32755778_32755951	0.0126014	SOX2.p2	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr6_-_167195647_167195790	0.0125983	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr20_-_39680405_39680546	0.0125812	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg18_v1_chr16_+_1068781_1068869	0.0125639	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg18_v1_chr16_-_15095590_15095668	0.0125196	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg18_v1_chrX_-_100193500_100193575	0.0124632	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chr5_-_157011949_157012005	0.0124573	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg18_v1_chr8_+_7340777_7340877	0.0124342	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg18_v1_chr13_+_97856148_97856267	0.0124321	SOX2.p2	
hg18_v1_chr9_-_126309510_126309540	0.0123823	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg18_v1_chr2_+_190357354_190357536	0.0123531	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr22_-_30071565_30071686	0.0123215	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr8_-_71146103_71146115	0.0123101	SOX2.p2	AF319458|PRDM14|63978|PR domain containing 14	AK022595|PRDM14|63978|PR domain containing 14	NM_024504|PRDM14|63978|PR domain containing 14
hg18_v1_chr6_+_17708483_17708674	0.0123047	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg18_v1_chr12_+_97433462_97433535	0.0122815	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg18_v1_chr11_+_100367929_100368020	0.0122789	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg18_v1_chr3_-_126412882_126412932	0.0122395	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr4_-_124063167_124063255	0.0122073	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr5_-_133775419_133775488	0.0121618	SOX2.p2	CR604625|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR612735|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR591520|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR602620|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr12_+_103375116_103375318	0.012145	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg18_v1_chr5_+_96023627_96023742	0.0121097	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg18_v1_chr15_+_41450642_41450844	0.0121094	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg18_v1_chr3_+_2908920_2908920	0.0121015	SOX2.p2	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4
hg18_v1_chr19_+_10932713_10932718	0.0120565	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr1_-_152422304_152422308	0.0120411	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg18_v1_chrX_+_24621984_24621988	0.0120279	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr22_+_42908612_42908689	0.0120264	SOX2.p2	CR619524|PARVG|64098|parvin, gamma
hg18_v1_chr12_+_64869296_64869345	0.0119971	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr15_-_99276933_99277061	0.0119546	SOX2.p2	
hg18_v1_chr7_-_8268292_8268341	0.0119195	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr15_+_62230962_62231027	0.0119069	SOX2.p2	AK126655|SNX22|79856|sorting nexin 22	AK024014|SNX22|79856|sorting nexin 22	NM_024798|SNX22|79856|sorting nexin 22	BC019655|SNX22|79856|sorting nexin 22	BC036532|SNX22|79856|sorting nexin 22	BC014660|SNX22|79856|sorting nexin 22	BC030225|SNX22|79856|sorting nexin 22	AY044653|SNX22|79856|sorting nexin 22
hg18_v1_chr3_-_48204332_48204532	0.0119062	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg18_v1_chr15_-_62782399_62782413	0.0119052	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr12_+_47584159_47584220	0.0118719	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg18_v1_chr1_-_174442736_174442840	0.0118666	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr4_-_84150885_84150986	0.0118301	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr2_+_72968009_72968068	0.0118089	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg18_v1_chr12_-_109390439_109390471	0.0118051	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	CR613385|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr10_+_104253706_104253713	0.0117775	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr5_+_140200995_140201090	0.0117713	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg18_v1_chr7_-_27162688_27162853	0.0117242	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg18_v1_chrX_+_16578201_16578235	0.0116568	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg18_v1_chr19_-_60383280_60383531	0.011651	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg18_v1_chr7_-_130004119_130004151	0.011636	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chr6_-_30763057_30763079	0.011627	SOX2.p2	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr11_+_13646727_13646805	0.01162	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr14_+_41146513_41146522	0.0115609	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg18_v1_chr9_-_124280025_124280055	0.0115248	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr13_+_96592051_96592116	0.0115109	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chrX_+_145698993_145698993	0.0114654	SOX2.p2	NM_001144064|CXorf51|100129239|chromosome X open reading frame 51
hg18_v1_chr18_+_647461_647632	0.0114532	SOX2.p2	CR601528|TYMS|7298|thymidylate synthetase	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg18_v1_chr5_-_137116746_137116859	0.0114463	SOX2.p2	CR625349|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	CR622742|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg18_v1_chr2_-_152663454_152663498	0.011435	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr20_+_25336320_25336325	0.0114069	SOX2.p2	BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr21_-_30908093_30908119	0.0113812	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr19_+_977555_977580	0.0113522	SOX2.p2	CR616871|CNN2|1265|calponin 2
hg18_v1_chrX_+_24621964_24621978	0.0113116	SOX2.p2	BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr20_+_34603290_34603310	0.0112875	SOX2.p2	NM_006097|MYL9|10398|myosin, light chain 9, regulatory	NM_181526|MYL9|10398|myosin, light chain 9, regulatory
hg18_v1_chr5_+_162865128_162865315	0.0112682	SOX2.p2	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta	NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta	AB073390|MAT2B|27430|methionine adenosyltransferase II, beta	AL136664|MAT2B|27430|methionine adenosyltransferase II, beta	BC093030|MAT2B|27430|methionine adenosyltransferase II, beta	AK096178|MAT2B|27430|methionine adenosyltransferase II, beta	BC066645|MAT2B|27430|methionine adenosyltransferase II, beta	AM393097|MAT2B|27430|methionine adenosyltransferase II, beta	AM393737|MAT2B|27430|methionine adenosyltransferase II, beta	AF182814|MAT2B|27430|methionine adenosyltransferase II, beta	AF113225|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr9_-_15500899_15501022	0.0112393	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg18_v1_chr12_+_64869181_64869269	0.0112326	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr2_+_102719773_102719855	0.0112278	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg18_v1_chr5_+_180399830_180399856	0.0112187	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr6_-_108688860_108688914	0.0112107	SOX2.p2	CR595428|SNX3|8724|sorting nexin 3	CR606126|SNX3|8724|sorting nexin 3	BC008444|SNX3|8724|sorting nexin 3
hg18_v1_chr7_+_23112441_23112441	0.0111987	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg18_v1_chr14_+_59782222_59782227	0.0111605	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chrX_+_69404879_69404926	0.0111502	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg18_v1_chr3_+_130641828_130641828	0.0111321	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr17_-_77422400_77422461	0.0111316	SOX2.p2	
hg18_v1_chr19_-_63301418_63301541	0.0111272	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr1_+_172683834_172683872	0.0111154	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr8_-_133756943_133757076	0.0110993	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg18_v1_chr4_-_5940893_5940901	0.011087	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr5_+_156540425_156540565	0.0110827	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg18_v1_chr11_+_110916442_110916442	0.011048	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg18_v1_chr6_-_52549673_52549761	0.0110264	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr3_+_130641779_130641826	0.010994	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr12_-_21701985_21701999	0.0109603	SOX2.p2	CR617803|LDHB|3945|lactate dehydrogenase B	CR625734|LDHB|3945|lactate dehydrogenase B	BC071860|LDHB|3945|lactate dehydrogenase B	CR625893|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr3_+_130641765_130641777	0.0109583	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr13_-_98708549_98708682	0.0109268	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr19_-_48815853_48815853	0.0109261	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg18_v1_chr11_-_5662762_5662917	0.0109049	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr17_+_55052185_55052270	0.010892	SOX2.p2	
hg18_v1_chr18_+_53967544_53967566	0.0108327	SOX2.p2	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_-_3583724_3583784	0.0108086	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg18_v1_chr12_+_43896099_43896133	0.0108064	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg18_v1_chr22_+_23925824_23925865	0.0107892	SOX2.p2	NM_004076|CRYBB3|1417|crystallin, beta B3	U71216|CRYBB3|1417|crystallin, beta B3	BC069479|CRYBB3|1417|crystallin, beta B3	BC102021|CRYBB3|1417|crystallin, beta B3	BC102022|CRYBB3|1417|crystallin, beta B3	BC107482|CRYBB3|1417|crystallin, beta B3	CR456427|CRYBB3|1417|crystallin, beta B3
hg18_v1_chr20_+_31541565_31541700	0.0107718	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr5_-_146869811_146869828	0.0107085	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chrX_+_149902415_149902515	0.0107025	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr2_+_12775814_12775883	0.0106928	SOX2.p2	
hg18_v1_chr9_-_138454071_138454087	0.0106891	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr3_-_152173475_152173475	0.0106671	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg18_v1_chrX_+_133334965_133335121	0.0106551	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr19_-_14800275_14800275	0.0106227	SOX2.p2	NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5
hg18_v1_chr10_-_30958631_30958652	0.0106138	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg18_v1_chr5_-_132326872_132326960	0.0106051	SOX2.p2	AF213987|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr2_-_104834344_104834352	0.0105432	SOX2.p2	AK096498|LOC100506421|100506421|hypothetical LOC100506421
hg18_v1_chr3_+_39346200_39346298	0.0105359	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr4_-_83702123_83702154	0.0105319	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg18_v1_chr5_-_136862786_136862973	0.0105201	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg18_v1_chr9_-_124630630_124630755	0.0104907	SOX2.p2	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr7_+_116289833_116289911	0.0104825	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr3_-_63824544_63824848	0.010473	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr11_+_26972244_26972306	0.0104147	SOX2.p2	CR602973|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr21_+_46094301_46094331	0.0104031	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chrX_+_122821217_122822029	0.0103961	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr17_-_77442658_77442751	0.0103757	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg18_v1_chrX_+_56606686_56606866	0.0103709	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg18_v1_chr21_+_30895276_30895310	0.0103657	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr1_-_166149867_166150076	0.0103586	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg18_v1_chr3_+_9748395_9748415	0.0103411	SOX2.p2	AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr11_-_49960646_49960646	0.0102944	SOX2.p2	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12
hg18_v1_chr3_-_188339882_188340018	0.0102845	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like	CR603001|RPL39L|116832|ribosomal protein L39-like
hg18_v1_chr15_-_88256922_88257296	0.0102731	SOX2.p2	AK093274|C15orf38|348110|chromosome 15 open reading frame 38	AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	BC053602|C15orf38|348110|chromosome 15 open reading frame 38	CR618861|C15orf38|348110|chromosome 15 open reading frame 38	NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	NM_182616|C15orf38|348110|chromosome 15 open reading frame 38
hg18_v1_chr12_-_90100679_90100707	0.0102673	SOX2.p2	CR621501|DCN|1634|decorin	CR625941|DCN|1634|decorin	CR597299|DCN|1634|decorin	CR605408|DCN|1634|decorin	CR612130|DCN|1634|decorin	CR598428|DCN|1634|decorin	CR605283|DCN|1634|decorin	CR610969|DCN|1634|decorin	CR626006|DCN|1634|decorin
hg18_v1_chr1_+_157676135_157676172	0.0102455	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg18_v1_chr20_-_54534387_54534387	0.0102243	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg18_v1_chrX_+_54963953_54964012	0.0102146	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg18_v1_chr3_+_73128667_73128695	0.0102083	SOX2.p2	BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	CR606592|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr16_+_31632031_31632064	0.0101954	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg18_v1_chr16_-_54547443_54547443	0.0101903	SOX2.p2	AK294334|CES5A|221223|carboxylesterase 5A	NM_001190158|CES5A|221223|carboxylesterase 5A
hg18_v1_chr8_+_65655367_65655477	0.0101817	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg18_v1_chr22_-_40414765_40414858	0.0101753	SOX2.p2	CR616990|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR623174|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR605954|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR616994|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593004|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR612873|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR600000|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR613725|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593383|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593477|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg18_v1_chr4_+_189297591_189297638	0.010167	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr13_-_35818777_35818939	0.0101317	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr1_+_115373937_115373937	0.010092	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg18_v1_chr9_+_74326536_74326536	0.0100808	SOX2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg18_v1_chr8_-_17986584_17986632	0.0100727	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr6_-_91063301_91063365	0.0100526	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr19_-_47790820_47790921	0.0100333	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg18_v1_chr8_-_24869945_24870049	0.0100282	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg18_v1_chr9_-_115101140_115101140	0.0100194	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr12_-_55040123_55040178	0.00999987	SOX2.p2	BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr4_+_164484540_164484540	0.00995788	SOX2.p2	BC042416|NPY5R|4889|neuropeptide Y receptor Y5	NM_006174|NPY5R|4889|neuropeptide Y receptor Y5
hg18_v1_chr11_-_33714448_33714600	0.00995063	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr6_-_96131974_96132046	0.00993181	SOX2.p2	
hg18_v1_chr17_-_77422526_77422549	0.00993008	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR594088|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr10_+_115514567_115514567	0.00989997	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr9_+_124321239_124321241	0.00987262	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg18_v1_chr4_+_123967265_123967323	0.0098487	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr19_+_45774626_45774631	0.00984572	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chrX_+_9392980_9393489	0.00983754	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg18_v1_chr1_-_174442906_174442977	0.00982802	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr9_-_21295311_21295311	0.00982193	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr2_+_24660849_24660913	0.00981642	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr4_-_39655554_39655912	0.00980004	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr12_+_64869271_64869283	0.0097806	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr4_-_113777569_113777599	0.00974	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr17_-_77422463_77422524	0.00973357	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR597273|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR609352|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR597482|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR599297|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR609835|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR612591|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR617872|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR620401|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR604600|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR624605|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	CR606983|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr15_-_74941339_74941339	0.00972692	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr2_-_64224948_64225108	0.00969627	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg18_v1_chr1_-_245561613_245561667	0.00969548	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr8_-_38245694_38245932	0.00968628	SOX2.p2	CR591117|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606207|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR597379|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606143|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B
hg18_v1_chr16_+_31632065_31632068	0.00968582	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg18_v1_chr1_-_242681860_242682062	0.00967576	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr6_-_11340869_11340885	0.00965905	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr19_+_57464659_57464678	0.00965881	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr13_+_112681626_112681655	0.00964074	SOX2.p2	AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg18_v1_chr1_-_144322271_144322287	0.00963495	SOX2.p2	CR608817|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr14_+_54046295_54046427	0.00961947	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	CR601996|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg18_v1_chr15_-_41698251_41698289	0.00960371	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	BC129932|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg18_v1_chr15_+_80741827_80741867	0.0095895	SOX2.p2	AK309746|LOC80154|80154|hypothetical LOC80154	AK310769|LOC80154|80154|hypothetical LOC80154	BC072390|LOC80154|80154|hypothetical LOC80154	AK291684|LOC80154|80154|hypothetical LOC80154	AK309420|LOC80154|80154|hypothetical LOC80154	AK307285|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr1_+_246578699_246578699	0.00958419	SOX2.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr2_+_69995740_69995769	0.00957594	SOX2.p2	AK301088|MXD1|4084|MAX dimerization protein 1	AK312734|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr3_+_184454286_184454314	0.00955957	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chrX_-_101284026_101284100	0.0095547	SOX2.p2	BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6	NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6
hg18_v1_chr7_+_100047660_100047751	0.009505	SOX2.p2	CR609640|MOSPD3|64598|motile sperm domain containing 3	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr1_+_160734259_160734414	0.00950497	SOX2.p2	AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr1_+_86943074_86943100	0.00947549	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr3_+_52694975_52695148	0.00944108	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR607914|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR598596|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR608648|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg18_v1_chr5_+_172415891_172416089	0.00943978	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chr17_-_7106497_7106523	0.00943972	SOX2.p2	CR611223|CLDN7|1366|claudin 7	CR594337|CLDN7|1366|claudin 7	BC001055|CLDN7|1366|claudin 7	AK313958|CLDN7|1366|claudin 7	CR607084|CLDN7|1366|claudin 7
hg18_v1_chr6_-_27943287_27943349	0.00941893	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg18_v1_chr6_-_167195987_167196010	0.0094109	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr11_+_94439964_94440020	0.00940056	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr19_+_38263625_38263625	0.00939276	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chr4_+_100651183_100651222	0.00938284	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr1_-_152422270_152422281	0.00936465	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	CR597930|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg18_v1_chr3_+_185515543_185515977	0.00931785	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr3_+_9748427_9748433	0.00930656	SOX2.p2	BC068262|BRPF1|7862|bromodomain and PHD finger containing, 1	BC036374|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_001003694|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_004634|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr22_-_16637221_16637225	0.00926933	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg18_v1_chr20_-_5048443_5048668	0.00923878	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen	CR617056|PCNA|5111|proliferating cell nuclear antigen	CR619580|PCNA|5111|proliferating cell nuclear antigen
hg18_v1_chr13_+_97593411_97593434	0.00923035	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chrX_+_135407336_135407509	0.0092071	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr14_-_19572756_19572756	0.00920001	SOX2.p2	NM_001004714|OR4K13|390433|olfactory receptor, family 4, subfamily K, member 13
hg18_v1_chr1_+_32777556_32777707	0.00919761	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr15_-_41449399_41449551	0.00916229	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg18_v1_chr11_+_33236435_33236455	0.00914987	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chrX_-_16798383_16798454	0.00911798	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr14_+_20283938_20283967	0.00911342	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr6_-_88468667_88468668	0.00907783	SOX2.p2	AK222701|AKIRIN2|55122|akirin 2
hg18_v1_chr22_-_16637238_16637430	0.00907655	SOX2.p2	CR600376|BID|637|BH3 interacting domain death agonist	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	CR611157|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist
hg18_v1_chr18_+_70134089_70134089	0.00906569	SOX2.p2	CR749350|DKFZP781G0119|644041|hypothetical protein LOC644041	NM_001174123|DKFZP781G0119|644041|hypothetical protein LOC644041
hg18_v1_chr17_-_602218_602253	0.0090239	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg18_v1_chr1_-_159369041_159369061	0.00902274	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr15_-_63068824_63068900	0.00899952	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr1_+_29011240_29011240	0.00897213	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg18_v1_chr11_-_780065_780091	0.00895898	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr2_+_219141761_219141921	0.00895054	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg18_v1_chr19_+_2928480_2928652	0.00892979	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	CR607853|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg18_v1_chr6_+_88021644_88021755	0.00892796	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr21_+_32585994_32585994	0.00891987	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr15_-_41381744_41381744	0.00889651	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg18_v1_chr20_+_2792688_2792879	0.00888361	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg18_v1_chr17_+_35728070_35728077	0.00887661	SOX2.p2	AK130192|RARA|5914|retinoic acid receptor, alpha
hg18_v1_chr19_+_45774569_45774610	0.00887266	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr1_-_101132925_101132991	0.00883892	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr11_-_122357545_122357588	0.00883039	SOX2.p2	AB231738|BSX|390259|brain-specific homeobox	NM_001098169|BSX|390259|brain-specific homeobox
hg18_v1_chr8_-_18915443_18915690	0.00882099	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr5_-_149446303_149446316	0.00882044	SOX2.p2	AK294467|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr20_-_3097070_3097206	0.00881888	SOX2.p2	AB011124|ProSAPiP1|9762|ProSAPiP1 protein	NM_014731|ProSAPiP1|9762|ProSAPiP1 protein
hg18_v1_chr7_+_6596183_6596468	0.00879798	SOX2.p2	BC001076|C7orf26|79034|chromosome 7 open reading frame 26	BC005121|C7orf26|79034|chromosome 7 open reading frame 26	AK056149|C7orf26|79034|chromosome 7 open reading frame 26	NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	CR620057|C7orf26|79034|chromosome 7 open reading frame 26
hg18_v1_chr18_-_75812591_75812637	0.00879418	SOX2.p2	BC030140|PQLC1|80148|PQ loop repeat containing 1	CR602428|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr11_-_5946299_5946299	0.00879165	SOX2.p2	NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5
hg18_v1_chr3_+_73128629_73128665	0.0087817	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr6_-_13922525_13922969	0.00876757	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr4_-_39655944_39656032	0.00875626	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr4_+_48038095_48038242	0.00875137	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg18_v1_chr4_+_88961573_88961586	0.00874981	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg18_v1_chr11_+_123282307_123282348	0.00872951	SOX2.p2	BC137180|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	BC137206|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	NM_001005197|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4
hg18_v1_chr1_-_75854281_75854387	0.0087139	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg18_v1_chr15_+_73278285_73278314	0.00867361	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg18_v1_chr16_+_70053681_70053698	0.00866241	SOX2.p2	
hg18_v1_chr18_-_35634247_35634285	0.00861537	SOX2.p2	AK090603|LOC647946|647946|hypothetical LOC647946
hg18_v1_chr5_-_147191428_147191452	0.00860004	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr19_+_45774632_45774632	0.00857139	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr7_+_91762227_91762355	0.00855835	SOX2.p2	
hg18_v1_chr4_+_120167770_120167775	0.00855031	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr16_-_56038771_56038940	0.00854443	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chr15_-_72282452_72282498	0.00853127	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr6_+_12622286_12622290	0.00848592	SOX2.p2	
hg18_v1_chr7_+_77307382_77307508	0.00847069	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr6_+_64403631_64403667	0.00846621	SOX2.p2	AK055678|PHF3|23469|PHD finger protein 3
hg18_v1_chr7_-_92585205_92585234	0.00846125	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg18_v1_chr15_+_48434397_48434507	0.00845212	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr12_-_47735373_47735373	0.00844174	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr17_+_41457394_41457437	0.00844174	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg18_v1_chr3_-_49133260_49133275	0.00842748	SOX2.p2	AK294756|USP19|10869|ubiquitin specific peptidase 19
hg18_v1_chr7_+_50106227_50106227	0.00840297	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr16_+_65196031_65196119	0.00837875	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr15_+_48434941_48435041	0.00835837	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr5_-_176671897_176671915	0.00834381	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3	CR595562|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr9_+_117955890_117955892	0.00833617	SOX2.p2	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg18_v1_chr16_+_57091546_57091653	0.00832971	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	CR590492|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg18_v1_chr6_-_24985432_24985561	0.00830421	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr19_-_55124764_55124866	0.00829602	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr17_-_53950191_53950293	0.00829032	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr5_+_55069601_55069665	0.00823082	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr5_+_132037271_132037271	0.00822253	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chr1_+_24158887_24158897	0.00820714	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr16_-_2776606_2776842	0.00820354	SOX2.p2	AF536382|PRSS33|260429|protease, serine, 33	BC062334|PRSS33|260429|protease, serine, 33	NM_152891|PRSS33|260429|protease, serine, 33
hg18_v1_chr17_-_77094375_77094425	0.00820256	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	CR595991|ACTG1|71|actin, gamma 1	CR620790|ACTG1|71|actin, gamma 1	CR610111|ACTG1|71|actin, gamma 1	CR612408|ACTG1|71|actin, gamma 1	CR623642|ACTG1|71|actin, gamma 1	CR590591|ACTG1|71|actin, gamma 1	CR594098|ACTG1|71|actin, gamma 1	CR598828|ACTG1|71|actin, gamma 1	CR610162|ACTG1|71|actin, gamma 1	CR610710|ACTG1|71|actin, gamma 1	CR612488|ACTG1|71|actin, gamma 1	CR612527|ACTG1|71|actin, gamma 1	CR613019|ACTG1|71|actin, gamma 1	CR615078|ACTG1|71|actin, gamma 1	CR615292|ACTG1|71|actin, gamma 1	CR615976|ACTG1|71|actin, gamma 1	CR617657|ACTG1|71|actin, gamma 1	CR618764|ACTG1|71|actin, gamma 1	CR626452|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	CR600687|ACTG1|71|actin, gamma 1	CR591798|ACTG1|71|actin, gamma 1	CR594425|ACTG1|71|actin, gamma 1	CR595246|ACTG1|71|actin, gamma 1	CR595791|ACTG1|71|actin, gamma 1	CR596062|ACTG1|71|actin, gamma 1	CR596102|ACTG1|71|actin, gamma 1	CR596522|ACTG1|71|actin, gamma 1	CR597843|ACTG1|71|actin, gamma 1	CR599592|ACTG1|71|actin, gamma 1	CR599978|ACTG1|71|actin, gamma 1	CR600128|ACTG1|71|actin, gamma 1	CR601583|ACTG1|71|actin, gamma 1	CR602480|ACTG1|71|actin, gamma 1	CR602599|ACTG1|71|actin, gamma 1	CR604033|ACTG1|71|actin, gamma 1	CR606124|ACTG1|71|actin, gamma 1	CR606241|ACTG1|71|actin, gamma 1	CR606346|ACTG1|71|actin, gamma 1	CR609318|ACTG1|71|actin, gamma 1	CR610496|ACTG1|71|actin, gamma 1	CR610665|ACTG1|71|actin, gamma 1	CR611108|ACTG1|71|actin, gamma 1	CR611432|ACTG1|71|actin, gamma 1	CR611536|ACTG1|71|actin, gamma 1	CR612114|ACTG1|71|actin, gamma 1	CR612705|ACTG1|71|actin, gamma 1	CR614439|ACTG1|71|actin, gamma 1	CR614891|ACTG1|71|actin, gamma 1	CR615028|ACTG1|71|actin, gamma 1	CR616983|ACTG1|71|actin, gamma 1	CR617404|ACTG1|71|actin, gamma 1	CR617643|ACTG1|71|actin, gamma 1	CR617915|ACTG1|71|actin, gamma 1	CR619691|ACTG1|71|actin, gamma 1	CR619966|ACTG1|71|actin, gamma 1	CR620836|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	CR591159|ACTG1|71|actin, gamma 1	CR595688|ACTG1|71|actin, gamma 1	CR596065|ACTG1|71|actin, gamma 1	CR598534|ACTG1|71|actin, gamma 1	CR609723|ACTG1|71|actin, gamma 1	CR612862|ACTG1|71|actin, gamma 1	CR616609|ACTG1|71|actin, gamma 1	CR616966|ACTG1|71|actin, gamma 1	CR617867|ACTG1|71|actin, gamma 1	CR619914|ACTG1|71|actin, gamma 1	CR620218|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	CR597515|ACTG1|71|actin, gamma 1	CR592121|ACTG1|71|actin, gamma 1	CR592736|ACTG1|71|actin, gamma 1	CR593892|ACTG1|71|actin, gamma 1	CR601927|ACTG1|71|actin, gamma 1	CR602348|ACTG1|71|actin, gamma 1	CR610810|ACTG1|71|actin, gamma 1	CR625364|ACTG1|71|actin, gamma 1	CR626577|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	CR597492|ACTG1|71|actin, gamma 1	CR597615|ACTG1|71|actin, gamma 1	CR597885|ACTG1|71|actin, gamma 1	CR599672|ACTG1|71|actin, gamma 1	CR612443|ACTG1|71|actin, gamma 1	CR617232|ACTG1|71|actin, gamma 1	CR620630|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	CR590228|ACTG1|71|actin, gamma 1	CR590320|ACTG1|71|actin, gamma 1	CR590603|ACTG1|71|actin, gamma 1	CR591211|ACTG1|71|actin, gamma 1	CR592707|ACTG1|71|actin, gamma 1	CR594922|ACTG1|71|actin, gamma 1	CR595093|ACTG1|71|actin, gamma 1	CR595449|ACTG1|71|actin, gamma 1	CR597397|ACTG1|71|actin, gamma 1	CR597456|ACTG1|71|actin, gamma 1	CR598076|ACTG1|71|actin, gamma 1	CR598244|ACTG1|71|actin, gamma 1	CR598734|ACTG1|71|actin, gamma 1	CR599814|ACTG1|71|actin, gamma 1	CR599830|ACTG1|71|actin, gamma 1	CR599892|ACTG1|71|actin, gamma 1	CR605191|ACTG1|71|actin, gamma 1	CR608951|ACTG1|71|actin, gamma 1	CR609271|ACTG1|71|actin, gamma 1	CR609909|ACTG1|71|actin, gamma 1	CR610691|ACTG1|71|actin, gamma 1	CR611607|ACTG1|71|actin, gamma 1	CR612364|ACTG1|71|actin, gamma 1	CR614730|ACTG1|71|actin, gamma 1	CR616006|ACTG1|71|actin, gamma 1	CR616940|ACTG1|71|actin, gamma 1	CR616969|ACTG1|71|actin, gamma 1	CR618617|ACTG1|71|actin, gamma 1	CR619367|ACTG1|71|actin, gamma 1	CR619574|ACTG1|71|actin, gamma 1	CR620806|ACTG1|71|actin, gamma 1	CR621813|ACTG1|71|actin, gamma 1	CR621873|ACTG1|71|actin, gamma 1	CR622814|ACTG1|71|actin, gamma 1	CR623020|ACTG1|71|actin, gamma 1	CR623123|ACTG1|71|actin, gamma 1	CR625920|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	CR590980|ACTG1|71|actin, gamma 1	CR591079|ACTG1|71|actin, gamma 1	CR591509|ACTG1|71|actin, gamma 1	CR591533|ACTG1|71|actin, gamma 1	CR594416|ACTG1|71|actin, gamma 1	CR596618|ACTG1|71|actin, gamma 1	CR598395|ACTG1|71|actin, gamma 1	CR600669|ACTG1|71|actin, gamma 1	CR600832|ACTG1|71|actin, gamma 1	CR602399|ACTG1|71|actin, gamma 1	CR609414|ACTG1|71|actin, gamma 1	CR615214|ACTG1|71|actin, gamma 1	CR615511|ACTG1|71|actin, gamma 1	CR621190|ACTG1|71|actin, gamma 1	CR603777|ACTG1|71|actin, gamma 1	CR604825|ACTG1|71|actin, gamma 1	CR606117|ACTG1|71|actin, gamma 1	CR621390|ACTG1|71|actin, gamma 1	CR592239|ACTG1|71|actin, gamma 1	CR592652|ACTG1|71|actin, gamma 1	CR592730|ACTG1|71|actin, gamma 1	CR594198|ACTG1|71|actin, gamma 1	CR596575|ACTG1|71|actin, gamma 1	CR598831|ACTG1|71|actin, gamma 1	CR598898|ACTG1|71|actin, gamma 1	CR602227|ACTG1|71|actin, gamma 1	CR603085|ACTG1|71|actin, gamma 1	CR603639|ACTG1|71|actin, gamma 1	CR603981|ACTG1|71|actin, gamma 1	CR604519|ACTG1|71|actin, gamma 1	CR605598|ACTG1|71|actin, gamma 1	CR606439|ACTG1|71|actin, gamma 1	CR609401|ACTG1|71|actin, gamma 1	CR611433|ACTG1|71|actin, gamma 1	CR615212|ACTG1|71|actin, gamma 1	CR618978|ACTG1|71|actin, gamma 1	CR620121|ACTG1|71|actin, gamma 1	CR621747|ACTG1|71|actin, gamma 1	CR623145|ACTG1|71|actin, gamma 1	CR624265|ACTG1|71|actin, gamma 1	CR625300|ACTG1|71|actin, gamma 1	CR590376|ACTG1|71|actin, gamma 1	CR594480|ACTG1|71|actin, gamma 1	CR594511|ACTG1|71|actin, gamma 1	CR595096|ACTG1|71|actin, gamma 1	CR597169|ACTG1|71|actin, gamma 1	CR599678|ACTG1|71|actin, gamma 1	CR600758|ACTG1|71|actin, gamma 1	CR602472|ACTG1|71|actin, gamma 1	CR604384|ACTG1|71|actin, gamma 1	CR604531|ACTG1|71|actin, gamma 1	CR605767|ACTG1|71|actin, gamma 1	CR607909|ACTG1|71|actin, gamma 1	CR611625|ACTG1|71|actin, gamma 1	CR615291|ACTG1|71|actin, gamma 1	CR619007|ACTG1|71|actin, gamma 1	CR622024|ACTG1|71|actin, gamma 1	CR622438|ACTG1|71|actin, gamma 1	CR624836|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	CR613104|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1	NM_001614|ACTG1|71|actin, gamma 1	CR622164|ACTG1|71|actin, gamma 1
hg18_v1_chr6_-_152999678_152999793	0.00820137	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr5_+_109052945_109052982	0.00819823	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr1_+_26609893_26609968	0.00818895	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr19_-_63353956_63353965	0.00816944	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg18_v1_chr3_+_139200347_139200391	0.00816885	SOX2.p2	AK098474|CLDN18|51208|claudin 18	NM_001002026|CLDN18|51208|claudin 18	AF349452|CLDN18|51208|claudin 18
hg18_v1_chr17_-_77422561_77422573	0.00815394	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chrX_+_11221453_11221474	0.00814154	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg18_v1_chr13_+_31318828_31318977	0.00813373	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg18_v1_chr19_+_9799561_9799580	0.00813331	SOX2.p2	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_001048241|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg18_v1_chr11_-_64302777_64302891	0.00812195	SOX2.p2	L49345|SF1|7536|splicing factor 1	L49380|SF1|7536|splicing factor 1	BC032676|SF1|7536|splicing factor 1	BC020217|SF1|7536|splicing factor 1	BC069273|SF1|7536|splicing factor 1	D26120|SF1|7536|splicing factor 1	D26121|SF1|7536|splicing factor 1	AK301803|SF1|7536|splicing factor 1	BC034451|SF1|7536|splicing factor 1	NM_004630|SF1|7536|splicing factor 1	NM_201995|SF1|7536|splicing factor 1	NM_201997|SF1|7536|splicing factor 1	NM_201998|SF1|7536|splicing factor 1
hg18_v1_chr20_+_61622985_61623074	0.0080891	SOX2.p2	CR608021|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg18_v1_chr17_+_25730107_25730124	0.00807262	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	U65090|CPD|1362|carboxypeptidase D
hg18_v1_chr22_-_16637194_16637220	0.0080426	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg18_v1_chr12_-_51001407_51001448	0.00803785	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg18_v1_chrX_-_119487164_119487182	0.00801917	SOX2.p2	CR606114|LAMP2|3920|lysosomal-associated membrane protein 2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr16_-_67977041_67977232	0.00801764	SOX2.p2	U95970|TERF2|7014|telomeric repeat binding factor 2
hg18_v1_chr12_+_132167512_132167542	0.00798235	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg18_v1_chr19_+_3831617_3831653	0.00796827	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr11_+_113280727_113280865	0.00794814	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg18_v1_chr17_-_74432671_74432750	0.00794076	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr10_+_35455986_35456061	0.00793783	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chr3_+_9826643_9826643	0.00790684	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg18_v1_chr1_-_144322225_144322261	0.00788672	SOX2.p2	CR592330|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	CR613712|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr18_+_71127246_71127414	0.00788241	SOX2.p2	AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1	BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1
hg18_v1_chr7_-_124192916_124193149	0.00786082	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg18_v1_chr19_+_46561688_46561710	0.00782452	SOX2.p2	NM_001098825|TMEM91|641649|transmembrane protein 91
hg18_v1_chr11_-_55128424_55128449	0.00781736	SOX2.p2	NM_001004700|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11	BC140727|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11
hg18_v1_chr13_-_47885653_47885653	0.00781425	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg18_v1_chr10_+_26545599_26545744	0.00780253	SOX2.p2	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr20_+_33667160_33667339	0.00779905	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg18_v1_chr10_-_90702490_90702559	0.0077895	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR619420|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR597033|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR621459|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr11_-_70350292_70350362	0.0077828	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr11_-_62231636_62231775	0.00776294	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr17_+_35629080_35629200	0.0077277	SOX2.p2	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg18_v1_chr21_-_31107431_31107440	0.00768962	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr12_+_67489063_67489073	0.00767185	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr3_-_129023850_129024390	0.007671	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr17_+_7427688_7427688	0.00763896	SOX2.p2	NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr13_-_29938029_29938081	0.00760901	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr22_+_39817733_39817740	0.00757762	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg18_v1_chr16_+_31098931_31098958	0.00756629	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma	CR591758|FUS|2521|fused in sarcoma
hg18_v1_chr14_+_49304533_49304641	0.00756098	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	CR594220|KLHDC2|23588|kelch domain containing 2	CR597789|KLHDC2|23588|kelch domain containing 2	CR622573|KLHDC2|23588|kelch domain containing 2	CR618882|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	CR592955|KLHDC2|23588|kelch domain containing 2	CR617895|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	CR609630|KLHDC2|23588|kelch domain containing 2	CR594509|KLHDC2|23588|kelch domain containing 2	CR614613|KLHDC2|23588|kelch domain containing 2	CR591808|KLHDC2|23588|kelch domain containing 2	CR592763|KLHDC2|23588|kelch domain containing 2	CR625292|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr9_-_36365965_36366036	0.0075573	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg18_v1_chr1_-_181654027_181654117	0.0075519	SOX2.p2	
hg18_v1_chr6_-_94185780_94186028	0.0075376	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr9_+_136912474_136912488	0.00752164	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg18_v1_chr11_-_70350509_70350520	0.00750563	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chrX_+_140505500_140505560	0.00749064	SOX2.p2	NM_145662|SPANXA2|728712|SPANX family, member A2	AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1	AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1
hg18_v1_chr3_-_95264349_95264520	0.00747286	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr1_+_179164195_179164213	0.00746382	SOX2.p2	
hg18_v1_chr6_-_35764588_35764608	0.00746171	SOX2.p2	HM245391|FKBP5|2289|FK506 binding protein 5	AB209893|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr10_+_59764718_59764967	0.00744642	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr20_+_34428857_34428857	0.00743016	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg18_v1_chr11_+_48194937_48194937	0.00742817	SOX2.p2	NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1
hg18_v1_chr1_+_159334774_159334815	0.00734868	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg18_v1_chr21_+_16024157_16024235	0.00734106	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr2_+_112749617_112749648	0.00733381	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg18_v1_chr11_-_125730655_125730691	0.00733081	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr6_+_72949092_72949175	0.00730798	SOX2.p2	AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr11_+_62231741_62231882	0.0072591	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr1_-_146090802_146091049	0.00723828	SOX2.p2	AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1	BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11
hg18_v1_chr15_+_47502666_47502771	0.00723782	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr2_-_131838200_131838200	0.00723313	SOX2.p2	NM_001077637|LOC150786|150786|RAB6C-like
hg18_v1_chr7_+_100169184_100169184	0.00722046	SOX2.p2	AF332975|ZAN|7455|zonadhesin	AF332976|ZAN|7455|zonadhesin	AF332977|ZAN|7455|zonadhesin	AF332978|ZAN|7455|zonadhesin	AF332979|ZAN|7455|zonadhesin	AF332980|ZAN|7455|zonadhesin	NM_003386|ZAN|7455|zonadhesin	NM_173059|ZAN|7455|zonadhesin
hg18_v1_chr3_+_9748439_9748461	0.00715098	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr7_+_99613282_99613318	0.00713122	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr19_-_3930828_3931135	0.00712178	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg18_v1_chr3_+_161956689_161956689	0.00711342	SOX2.p2	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr17_+_77261401_77261427	0.00708173	SOX2.p2	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chrX_+_18618965_18618966	0.00707947	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg18_v1_chr12_+_54080480_54080579	0.0070617	SOX2.p2	BC136897|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	BC136899|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	NM_001005518|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65
hg18_v1_chr6_+_16251260_16251318	0.00702037	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr2_+_61146866_61146866	0.00701193	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr16_+_27468942_27468988	0.00699949	SOX2.p2	NM_015202|KIAA0556|23247|KIAA0556	AB011128|KIAA0556|23247|KIAA0556	BC150276|KIAA0556|23247|KIAA0556	BC131508|KIAA0556|23247|KIAA0556
hg18_v1_chr11_-_57927457_57927457	0.00698353	SOX2.p2	NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3
hg18_v1_chr3_+_99288706_99288706	0.00696432	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr16_+_10745174_10745317	0.00696174	SOX2.p2	AK310089|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	NM_002484|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK307148|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK223204|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC100290|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR600910|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR613650|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109322|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109323|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR622882|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR601815|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)
hg18_v1_chr4_-_191185390_191185405	0.00695587	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001005217|FRG2|448831|FSHD region gene 2
hg18_v1_chr11_+_49930518_49930518	0.00693509	SOX2.p2	BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13	NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13
hg18_v1_chr4_+_95347773_95347895	0.0069155	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg18_v1_chr17_+_7264366_7264426	0.00689391	SOX2.p2	AK097400|SPEM1|374768|spermatid maturation 1	BC033882|SPEM1|374768|spermatid maturation 1	NM_199339|SPEM1|374768|spermatid maturation 1
hg18_v1_chr7_+_16533029_16533029	0.00688334	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr1_+_93317374_93317469	0.00687751	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr5_+_180582905_180582911	0.00684166	SOX2.p2	NM_033549|TRIM41|90933|tripartite motif containing 41	NM_201627|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr16_+_52081836_52081927	0.00681437	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr5_+_137716169_137716190	0.00680465	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr17_+_63462347_63462394	0.00679229	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR606537|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr6_-_108385905_108385995	0.00678947	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr11_+_63510478_63510514	0.00678373	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR616043|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617285|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604649|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR609035|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617582|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604801|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR618522|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598022|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR602250|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598740|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598561|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR599600|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603813|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617783|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr4_+_75242671_75242788	0.00677697	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr8_-_17315386_17315410	0.00677596	SOX2.p2	NM_004686|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr1_-_144322295_144322385	0.00675547	SOX2.p2	CR605615|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr3_-_32587188_32587369	0.00674933	SOX2.p2	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR619992|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR595277|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR623843|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1
hg18_v1_chr4_+_30331289_30331296	0.00669608	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg18_v1_chrX_+_152562013_152562125	0.00668031	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr17_-_2913650_2913704	0.00665557	SOX2.p2	BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5	BC118668|OR1D4|653166|olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)	BC122528|OR1D4|653166|olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)	NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5
hg18_v1_chr17_-_77094426_77094495	0.00664233	SOX2.p2	CR595732|ACTG1|71|actin, gamma 1
hg18_v1_chr11_+_63510403_63510472	0.0066331	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR610074|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617727|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603142|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR605354|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR620541|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr21_-_39642880_39642920	0.00662822	SOX2.p2	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr4_-_68766392_68766392	0.00661081	SOX2.p2	AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like	NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like
hg18_v1_chr17_-_64568641_64568730	0.00658334	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr16_-_65775326_65775400	0.00655292	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg18_v1_chr1_-_144322291_144322294	0.00655022	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr8_-_121893196_121893292	0.00653556	SOX2.p2	
hg18_v1_chr5_+_109052984_109053008	0.00650573	SOX2.p2	
hg18_v1_chr17_+_34279637_34279643	0.00647881	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg18_v1_chr2_-_3583801_3583833	0.006475	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	CR596638|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1	CR594242|RNASEH1|246243|ribonuclease H1
hg18_v1_chr16_-_73830025_73830058	0.00644994	SOX2.p2	AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr17_-_17125314_17125346	0.00644633	SOX2.p2	BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR600698|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR616766|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr12_+_97433545_97433601	0.00642939	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg18_v1_chr15_-_32662352_32662371	0.0064189	SOX2.p2	BX647673|GOLGA8B|440270|golgin A8 family, member B
hg18_v1_chr17_-_43328141_43328158	0.00641637	SOX2.p2	
hg18_v1_chr4_+_5104140_5104223	0.00641253	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr5_+_176492662_176492685	0.00638769	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr3_-_121065112_121065117	0.00634692	SOX2.p2	
hg18_v1_chr8_+_76482661_76482825	0.006341	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr3_+_42952855_42952887	0.00632615	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr7_-_155297576_155297727	0.00629893	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg18_v1_chr9_+_103335941_103335962	0.00628214	SOX2.p2	AF265230|RNF20|56254|ring finger protein 20	NM_019592|RNF20|56254|ring finger protein 20	AK022532|RNF20|56254|ring finger protein 20	BC110584|RNF20|56254|ring finger protein 20	BC110585|RNF20|56254|ring finger protein 20	BC152309|RNF20|56254|ring finger protein 20
hg18_v1_chr17_-_17125214_17125313	0.00628071	SOX2.p2	CR613300|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR597915|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR590945|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR602972|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR608585|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR595552|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR599192|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR617410|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR618089|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR619826|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR622277|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR594817|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr6_-_52549774_52549847	0.00625755	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr10_-_52315436_52315446	0.00624941	SOX2.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg18_v1_chr5_+_161427225_161427621	0.00624066	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg18_v1_chr11_+_125678856_125678856	0.00619965	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg18_v1_chr12_-_11030777_11030777	0.00619103	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr8_-_71146022_71146028	0.00618363	SOX2.p2	BC052311|PRDM14|63978|PR domain containing 14
hg18_v1_chr10_-_128067052_128067056	0.00616838	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr2_-_39517795_39517815	0.00616673	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr3_-_49133175_49133242	0.00616426	SOX2.p2	AB020698|USP19|10869|ubiquitin specific peptidase 19	BC146752|USP19|10869|ubiquitin specific peptidase 19	NM_006677|USP19|10869|ubiquitin specific peptidase 19	BC106029|USP19|10869|ubiquitin specific peptidase 19	AK300425|USP19|10869|ubiquitin specific peptidase 19
hg18_v1_chrX_+_17563333_17563333	0.00616329	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg18_v1_chr20_+_56989690_56989714	0.00613887	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	CR616677|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr19_-_6230797_6230809	0.00611096	SOX2.p2	
hg18_v1_chr5_-_43432969_43432997	0.00610411	SOX2.p2	AK307307|CCL28|56477|chemokine (C-C motif) ligand 28
hg18_v1_chr4_-_5941043_5941138	0.00609752	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	CR608807|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr22_-_16636748_16636812	0.00605648	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg18_v1_chr13_+_33290205_33290250	0.00604327	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr1_-_101132993_101133005	0.00603289	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr3_-_52779911_52780035	0.00603232	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg18_v1_chr10_-_14412813_14412900	0.00602606	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr3_-_49133254_49133259	0.00601666	SOX2.p2	AK296447|USP19|10869|ubiquitin specific peptidase 19
hg18_v1_chr15_+_63701322_63701322	0.00601156	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg18_v1_chr12_-_21702021_21702034	0.00600659	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	CR591075|LDHB|3945|lactate dehydrogenase B	CR592578|LDHB|3945|lactate dehydrogenase B	CR624424|LDHB|3945|lactate dehydrogenase B	CR603165|LDHB|3945|lactate dehydrogenase B	CR609530|LDHB|3945|lactate dehydrogenase B	CR624226|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B	CR601136|LDHB|3945|lactate dehydrogenase B	CR604960|LDHB|3945|lactate dehydrogenase B	CR596890|LDHB|3945|lactate dehydrogenase B	CR600793|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr6_-_108689000_108689156	0.00600194	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg18_v1_chr21_+_44002290_44002434	0.0059933	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg18_v1_chr5_+_140719773_140719886	0.00598078	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg18_v1_chr1_-_1157216_1157219	0.0059785	SOX2.p2	CR625758|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr12_+_32003648_32003674	0.00596801	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr12_+_53177789_53177803	0.00594792	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr2_+_8739563_8739745	0.00587056	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR607131|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR626410|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR620423|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR611001|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR614653|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg18_v1_chr1_+_153560841_153560991	0.00586204	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	CR604047|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	CR594338|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	CR607256|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	CR594503|RUSC1|23623|RUN and SH3 domain containing 1	CR603792|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	CR618456|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg18_v1_chr1_+_205736095_205736308	0.00582911	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr6_+_12825818_12825911	0.0058227	SOX2.p2	AK090769|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	AB051520|PHACTR1|221692|phosphatase and actin regulator 1	BC101526|PHACTR1|221692|phosphatase and actin regulator 1	BC101528|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr3_+_184453907_184454037	0.00581878	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr16_-_4528739_4528847	0.00581642	SOX2.p2	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr11_-_62445587_62445711	0.00580864	SOX2.p2	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1	NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1	AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1
hg18_v1_chr2_-_203485193_203485193	0.00578969	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg18_v1_chr3_+_142253432_142253462	0.0057548	SOX2.p2	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg18_v1_chr3_+_198961160_198961246	0.00575228	SOX2.p2	AL136558|FYTTD1|84248|forty-two-three domain containing 1	AK315019|FYTTD1|84248|forty-two-three domain containing 1	AJ344094|FYTTD1|84248|forty-two-three domain containing 1	AK296283|FYTTD1|84248|forty-two-three domain containing 1	AM393053|FYTTD1|84248|forty-two-three domain containing 1	CR533502|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr6_+_126112431_126112488	0.00572467	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr6_-_84197463_84197472	0.00570553	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg18_v1_chr22_-_49363209_49363371	0.00570279	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg18_v1_chr3_+_127905727_127905808	0.00569967	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg18_v1_chrX_+_37750778_37750810	0.00567731	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr5_-_32424444_32424519	0.0056086	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr19_+_56506907_56506913	0.0055789	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg18_v1_chr9_+_128716867_128716983	0.00557725	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg18_v1_chr12_+_119617060_119617142	0.00557148	SOX2.p2	
hg18_v1_chr5_+_161208475_161208475	0.00553731	SOX2.p2	NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr7_-_84589182_84589182	0.00552528	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg18_v1_chr1_-_152422261_152422264	0.00552471	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3	CR589996|TPM3|7170|tropomyosin 3
hg18_v1_chr15_-_48434567_48434617	0.00551604	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr1_-_49014993_49015176	0.00551529	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg18_v1_chr22_+_27498679_27498720	0.00550735	SOX2.p2	BC065549|CCDC117|150275|coiled-coil domain containing 117	BC053874|CCDC117|150275|coiled-coil domain containing 117	BC040488|CCDC117|150275|coiled-coil domain containing 117	AK302925|CCDC117|150275|coiled-coil domain containing 117
hg18_v1_chr10_+_105717459_105717495	0.00549715	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr21_-_39607288_39607396	0.00548583	SOX2.p2	BC140079|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292465|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292466|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080586|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080587|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ238214|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg18_v1_chr18_+_647666_647673	0.00547498	SOX2.p2	CR616172|TYMS|7298|thymidylate synthetase	CR601110|TYMS|7298|thymidylate synthetase
hg18_v1_chrX_+_152891184_152891184	0.00547456	SOX2.p2	CR613909|TMEM187|8269|transmembrane protein 187	NM_003492|TMEM187|8269|transmembrane protein 187
hg18_v1_chr5_-_149446287_149446301	0.00545138	SOX2.p2	BC129939|CSF1R|1436|colony stimulating factor 1 receptor	BX648599|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr9_-_99724559_99724672	0.00539448	SOX2.p2	CR605882|C9orf156|51531|chromosome 9 open reading frame 156	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	CR620447|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	CR604210|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg18_v1_chr19_-_9087438_9087438	0.00539349	SOX2.p2	NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1
hg18_v1_chr7_-_150411504_150411571	0.00538536	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr18_-_5187240_5187265	0.00535459	SOX2.p2	NM_001145194|LOC642597|642597|hypothetical protein LOC642597
hg18_v1_chr9_-_103540682_103540763	0.00535159	SOX2.p2	AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg18_v1_chr5_+_169713458_169713458	0.00535061	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg18_v1_chr2_+_169021001_169021010	0.00533808	SOX2.p2	AK172775|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr9_+_111442888_111442892	0.00530279	SOX2.p2	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg18_v1_chr5_-_168204430_168204444	0.00528529	SOX2.p2	
hg18_v1_chr12_-_21702000_21702019	0.00528069	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B	CR602865|LDHB|3945|lactate dehydrogenase B	CR612775|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr15_+_77362200_77362200	0.00525688	SOX2.p2	AK127037|ANKRD34C|390616|ankyrin repeat domain 34C	NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C
hg18_v1_chr10_+_104603956_104604026	0.00522965	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr22_-_31732648_31732805	0.00522672	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg18_v1_chr7_+_141265085_141265144	0.00522534	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg18_v1_chr9_-_138454095_138454169	0.00522448	SOX2.p2	BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr17_-_602125_602215	0.00520432	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg18_v1_chr6_+_111386455_111386591	0.00520401	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg18_v1_chr17_-_4967120_4967136	0.00519697	SOX2.p2	NM_014519|ZNF232|7775|zinc finger protein 232	AK316369|ZNF232|7775|zinc finger protein 232
hg18_v1_chr13_-_35818603_35818645	0.00517158	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr18_-_52456655_52456835	0.00516479	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	CR615108|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr12_+_105500814_105500829	0.00514079	SOX2.p2	AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg18_v1_chr17_-_40263704_40263706	0.00513989	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	CR594677|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr17_+_77261440_77261446	0.00511944	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr5_-_134763464_134763480	0.0051007	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr4_-_46690197_46690336	0.00503672	SOX2.p2	DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg18_v1_chr2_-_190357320_190357367	0.00500257	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr2_-_21106291_21106305	0.00497971	SOX2.p2	M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr1_+_1062137_1062259	0.00494446	SOX2.p2	BC028014|LOC254099|254099|hypothetical protein LOC254099
hg18_v1_chr1_+_178867744_178867777	0.0049389	SOX2.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr10_+_69314347_69314480	0.00491553	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chr18_+_19973445_19973448	0.0049065	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg18_v1_chr3_-_140677990_140678047	0.00489613	SOX2.p2	BC069296|RBP2|5948|retinol binding protein 2, cellular	BC069361|RBP2|5948|retinol binding protein 2, cellular	BC069396|RBP2|5948|retinol binding protein 2, cellular	BC069424|RBP2|5948|retinol binding protein 2, cellular	BC069447|RBP2|5948|retinol binding protein 2, cellular	BC069469|RBP2|5948|retinol binding protein 2, cellular	BC069513|RBP2|5948|retinol binding protein 2, cellular	BC069522|RBP2|5948|retinol binding protein 2, cellular	U13831|RBP2|5948|retinol binding protein 2, cellular	NM_004164|RBP2|5948|retinol binding protein 2, cellular	AK291978|RBP2|5948|retinol binding protein 2, cellular
hg18_v1_chr15_+_20507195_20507195	0.00489606	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr19_+_37528340_37528464	0.0048941	SOX2.p2	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg18_v1_chrX_+_119268518_119268711	0.00488681	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg18_v1_chr3_-_130641460_130641469	0.00487318	SOX2.p2	CR619777|MBD4|8930|methyl-CpG binding domain protein 4	AK312878|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr3_-_49133243_49133246	0.00487044	SOX2.p2	BC142660|USP19|10869|ubiquitin specific peptidase 19
hg18_v1_chr5_-_60493985_60494063	0.00484747	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	CR599620|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr16_+_66398477_66398563	0.00481799	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg18_v1_chr16_-_57309625_57309654	0.00480863	SOX2.p2	CR612588|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)
hg18_v1_chr19_+_45774620_45774622	0.00479625	SOX2.p2	CR590661|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chrX_+_71318250_71318351	0.00478588	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg18_v1_chr22_+_44059491_44059558	0.00475746	SOX2.p2	AF085808|UPK3A|7380|uroplakin 3A	BC069544|UPK3A|7380|uroplakin 3A	NM_001167574|UPK3A|7380|uroplakin 3A	NM_006953|UPK3A|7380|uroplakin 3A	BC108900|UPK3A|7380|uroplakin 3A	CR456608|UPK3A|7380|uroplakin 3A	AB010637|UPK3A|7380|uroplakin 3A	CU013204|UPK3A|7380|uroplakin 3A	CU013492|UPK3A|7380|uroplakin 3A
hg18_v1_chr4_+_30330963_30331231	0.00475668	SOX2.p2	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032456|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg18_v1_chr20_-_44468660_44468753	0.00475158	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg18_v1_chr6_+_170457774_170457836	0.00474883	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chrX_+_151860870_151860900	0.00473889	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chrX_-_16798363_16798381	0.0047288	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr17_+_4434024_4434123	0.00471656	SOX2.p2	NM_198501|SMTNL2|342527|smoothelin-like 2	AK124452|SMTNL2|342527|smoothelin-like 2	BC105050|SMTNL2|342527|smoothelin-like 2	BC112177|SMTNL2|342527|smoothelin-like 2
hg18_v1_chr7_+_113853790_113853942	0.00471129	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr4_+_47403107_47403116	0.00468673	SOX2.p2	
hg18_v1_chr17_+_46176105_46176113	0.00468397	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr10_+_96688399_96688466	0.00467706	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg18_v1_chr6_-_166502119_166502120	0.00465959	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr2_+_191009265_191009365	0.00464963	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr2_+_241023880_241023888	0.00462773	SOX2.p2	
hg18_v1_chr15_+_53488014_53488160	0.00454924	SOX2.p2	NM_001198784|FLJ27352|145788|hypothetical LOC145788	AK130862|FLJ27352|145788|hypothetical LOC145788	BX648577|FLJ27352|145788|hypothetical LOC145788
hg18_v1_chr3_-_57174353_57174393	0.0045372	SOX2.p2	AF458067|IL17RD|54756|interleukin 17 receptor D
hg18_v1_chr2_-_136005238_136005275	0.00452829	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg18_v1_chr1_+_224477941_224478005	0.00451593	SOX2.p2	BC111974|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC113441|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC143784|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	AF211891|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	NM_031944|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)
hg18_v1_chrX_+_119268713_119268724	0.00451366	SOX2.p2	
hg18_v1_chr6_-_16869579_16869773	0.00450717	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr3_-_49133248_49133251	0.0045018	SOX2.p2	BC142727|USP19|10869|ubiquitin specific peptidase 19
hg18_v1_chr18_-_42956730_42956732	0.00449735	SOX2.p2	AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr4_-_57242492_57242628	0.00448641	SOX2.p2	CR611831|HOPX|84525|HOP homeobox	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg18_v1_chr11_+_62813947_62814005	0.00448529	SOX2.p2	AK298430|SLC22A10|387775|solute carrier family 22, member 10	AB075876|SLC22A10|387775|solute carrier family 22, member 10	NM_001039752|SLC22A10|387775|solute carrier family 22, member 10
hg18_v1_chr11_+_124294355_124294355	0.00448275	SOX2.p2	AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1
hg18_v1_chr17_+_63462276_63462328	0.00448225	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR599710|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR607334|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR605528|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr7_-_13996166_13996166	0.00446084	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg18_v1_chr22_-_30071761_30071970	0.00446073	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr6_+_29382381_29382445	0.00442551	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr4_-_77163609_77163673	0.00442315	SOX2.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr12_+_132167057_132167119	0.00440695	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg18_v1_chr4_+_5104365_5104491	0.00440523	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr16_-_69114931_69114960	0.00440504	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg18_v1_chr12_-_21702036_21702045	0.0043772	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	CR606657|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr1_+_191295206_191295216	0.00437236	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg18_v1_chr14_-_91483325_91483563	0.00435776	SOX2.p2	AJ133490|FBLN5|10516|fibulin 5	CR457140|FBLN5|10516|fibulin 5	CR604352|FBLN5|10516|fibulin 5	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg18_v1_chr9_-_94226380_94226656	0.00434199	SOX2.p2	AB000114|OMD|4958|osteomodulin	AK313055|OMD|4958|osteomodulin	AK225922|OMD|4958|osteomodulin	AY358872|OMD|4958|osteomodulin	BC046356|OMD|4958|osteomodulin	NM_005014|OMD|4958|osteomodulin
hg18_v1_chr11_+_186760_186794	0.00431712	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg18_v1_chr19_+_45564549_45564697	0.00430781	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr6_-_134680888_134680888	0.00429937	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chrX_-_119550402_119550441	0.00429717	SOX2.p2	CR603224|CUL4B|8450|cullin 4B
hg18_v1_chr20_+_42399039_42399039	0.0042905	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg18_v1_chr19_-_13074513_13074539	0.00428012	SOX2.p2	M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1
hg18_v1_chr9_-_98104206_98104254	0.00427417	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg18_v1_chr14_-_106084085_106084503	0.00426808	SOX2.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chrX_+_48252290_48252420	0.00426471	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	CR623014|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr16_+_66836707_66836796	0.00425378	SOX2.p2	AK300596|PLA2G15|23659|phospholipase A2, group XV	AK074828|PLA2G15|23659|phospholipase A2, group XV	NM_012320|PLA2G15|23659|phospholipase A2, group XV	AK296263|PLA2G15|23659|phospholipase A2, group XV	AK298494|PLA2G15|23659|phospholipase A2, group XV	AL110209|PLA2G15|23659|phospholipase A2, group XV	CR598578|PLA2G15|23659|phospholipase A2, group XV	BC062605|PLA2G15|23659|phospholipase A2, group XV	AK001705|PLA2G15|23659|phospholipase A2, group XV	AK222790|PLA2G15|23659|phospholipase A2, group XV
hg18_v1_chr5_+_138705469_138705516	0.00425019	SOX2.p2	CR593605|PAIP2|51247|poly(A) binding protein interacting protein 2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr6_+_154373323_154373328	0.00424764	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr4_+_38341982_38342461	0.00423472	SOX2.p2	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr20_+_9443426_9443499	0.00423459	SOX2.p2	CR612846|C20orf103|24141|chromosome 20 open reading frame 103
hg18_v1_chr7_+_94130752_94130882	0.00423354	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr3_-_63824496_63824528	0.0042301	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr1_-_232810478_232810484	0.00419731	SOX2.p2	
hg18_v1_chr10_-_64246129_64246177	0.00416774	SOX2.p2	NM_000399|EGR2|1959|early growth response 2	NM_001136177|EGR2|1959|early growth response 2	NM_001136179|EGR2|1959|early growth response 2
hg18_v1_chr17_-_53946899_53946983	0.00415007	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr6_+_170457763_170457773	0.00414094	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr15_-_62782427_62782469	0.00413798	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_203485175_203485361	0.00412381	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg18_v1_chr15_-_58558410_58558722	0.00411685	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr22_+_42900168_42900211	0.004111	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg18_v1_chr15_-_40628202_40628283	0.00409171	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg18_v1_chr1_+_32600384_32600448	0.00408008	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg18_v1_chr3_-_158361175_158361242	0.00405977	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg18_v1_chr1_+_234372454_234372545	0.00405001	SOX2.p2	BC012100|GPR137B|7107|G protein-coupled receptor 137B	NM_003272|GPR137B|7107|G protein-coupled receptor 137B	AK295408|GPR137B|7107|G protein-coupled receptor 137B	AK312908|GPR137B|7107|G protein-coupled receptor 137B	AK223632|GPR137B|7107|G protein-coupled receptor 137B	AK301552|GPR137B|7107|G protein-coupled receptor 137B	CR608564|GPR137B|7107|G protein-coupled receptor 137B	AF027826|GPR137B|7107|G protein-coupled receptor 137B	AY242135|GPR137B|7107|G protein-coupled receptor 137B	CR541770|GPR137B|7107|G protein-coupled receptor 137B
hg18_v1_chr7_+_74017015_74017018	0.00404087	SOX2.p2	BC147030|GATSL2|729438|GATS protein-like 2	BC147031|GATSL2|729438|GATS protein-like 2	NM_001145063|GATSL1|389523|GATS protein-like 1
hg18_v1_chr5_-_180099663_180099704	0.00402194	SOX2.p2	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1	BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1
hg18_v1_chr20_+_25336328_25336372	0.00401358	SOX2.p2	D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr8_+_145158432_145158594	0.00400401	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chrX_-_76928142_76928232	0.00399047	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr2_-_162639297_162639308	0.00398369	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr20_+_35583020_35583163	0.003979	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	CR611594|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	CR593008|NNAT|4826|neuronatin	CR597280|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	CR615297|NNAT|4826|neuronatin	CR622140|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	CR598063|NNAT|4826|neuronatin	CR620236|NNAT|4826|neuronatin	CR599948|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin	CR601930|NNAT|4826|neuronatin
hg18_v1_chr1_+_243199906_243200064	0.00396865	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr1_+_107400789_107400988	0.00396431	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr9_+_80134302_80134349	0.00396165	SOX2.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr20_-_30794857_30794972	0.00395267	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg18_v1_chr6_-_90119329_90119684	0.00392708	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr15_+_36331411_36331963	0.00389368	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr20_+_17628592_17628604	0.00389028	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr3_+_23961739_23961899	0.00388034	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr5_+_65258316_65258356	0.0038682	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr7_-_122313646_122313822	0.00381044	SOX2.p2	AY264289|CADPS2|93664|Ca++-dependent secretion activator 2	AF401638|CADPS2|93664|Ca++-dependent secretion activator 2	BC054339|CADPS2|93664|Ca++-dependent secretion activator 2	BC136601|CADPS2|93664|Ca++-dependent secretion activator 2	BC144278|CADPS2|93664|Ca++-dependent secretion activator 2	BC144279|CADPS2|93664|Ca++-dependent secretion activator 2	AK126518|CADPS2|93664|Ca++-dependent secretion activator 2
hg18_v1_chr13_+_31503436_31503446	0.00379714	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg18_v1_chr8_+_30072513_30072570	0.00378813	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR620833|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr8_+_30072463_30072507	0.00374988	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr4_+_1693031_1693101	0.00373987	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg18_v1_chr12_+_132167551_132167669	0.00370484	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	CR601967|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg18_v1_chr15_-_57013092_57013155	0.00370446	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr14_+_72672893_72672912	0.00369272	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	CR595392|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg18_v1_chr17_-_77422551_77422559	0.00369014	SOX2.p2	CR617926|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg18_v1_chr7_+_87401368_87401670	0.00368123	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr19_+_62787319_62787439	0.00367761	SOX2.p2	AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)
hg18_v1_chr19_+_3831675_3831686	0.00367505	SOX2.p2	BC026217|ATCAY|85300|ataxia, cerebellar, Cayman type	AK027889|ATCAY|85300|ataxia, cerebellar, Cayman type	AK092309|ATCAY|85300|ataxia, cerebellar, Cayman type	AK299522|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr12_+_68923043_68923076	0.00363468	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg18_v1_chr11_-_6661093_6661207	0.00356674	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr1_+_210864411_210864438	0.00355886	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg18_v1_chr19_+_9799587_9799639	0.00354635	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	CR590001|UBL5|59286|ubiquitin-like 5	CR593093|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	CR606232|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg18_v1_chr11_-_61316628_61316664	0.00354293	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg18_v1_chr12_-_55040179_55040182	0.00353747	SOX2.p2	AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr16_+_88515917_88515917	0.00353702	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3	NM_001197181|TUBB3|10381|tubulin, beta 3
hg18_v1_chr6_+_96132064_96132181	0.00353541	SOX2.p2	BX640869|MANEA|79694|mannosidase, endo-alpha	NM_024641|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg18_v1_chr9_-_139202855_139202877	0.00352924	SOX2.p2	NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr6_+_144227265_144227265	0.00352641	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr1_-_148155986_148156070	0.00352057	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg18_v1_chr7_+_73709991_73710126	0.00351987	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg18_v1_chr5_+_140605100_140605164	0.00351972	SOX2.p2	AK312794|PCDHB15|56121|protocadherin beta 15	BC038797|PCDHB15|56121|protocadherin beta 15
hg18_v1_chr3_-_184628548_184628719	0.00351923	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg18_v1_chr4_+_14950657_14950709	0.00351698	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg18_v1_chr3_-_130641470_130641506	0.00351335	SOX2.p2	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr11_-_45896144_45896249	0.00350752	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg18_v1_chr19_+_57464635_57464657	0.00346969	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr4_+_120029426_120029639	0.00345657	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg18_v1_chr8_-_124818754_124818846	0.00345547	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg18_v1_chr14_-_20922264_20922264	0.00345274	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chrX_+_102852492_102852492	0.00343586	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg18_v1_chr13_+_27092846_27093085	0.00343104	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr11_-_55438633_55438633	0.00340319	SOX2.p2	NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2
hg18_v1_chr3_+_143824955_143825033	0.00337896	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg18_v1_chr14_-_105762742_105763023	0.00334961	SOX2.p2	
hg18_v1_chr19_+_3958690_3958768	0.00334119	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg18_v1_chr5_+_161207763_161207807	0.00334098	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr6_+_43089964_43089968	0.00333816	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr12_-_10846435_10846492	0.00333701	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr6_+_126112417_126112424	0.00333655	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr7_-_95063738_95063860	0.00331891	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg18_v1_chr1_+_112099703_112099781	0.0033144	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr1_+_26609819_26609857	0.00330303	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr5_-_101659864_101660151	0.0032808	SOX2.p2	AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1
hg18_v1_chr10_+_98582005_98582082	0.00322524	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr7_+_139124502_139124515	0.00321829	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr11_-_7775064_7775095	0.00320149	SOX2.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr6_+_43089970_43089977	0.0032012	SOX2.p2	BC009460|KLHDC3|116138|kelch domain containing 3	CR608943|KLHDC3|116138|kelch domain containing 3	CR599856|KLHDC3|116138|kelch domain containing 3	CR612447|KLHDC3|116138|kelch domain containing 3	CR620802|KLHDC3|116138|kelch domain containing 3	CR602982|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr19_+_45774636_45774742	0.00319836	SOX2.p2	CR598538|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr19_+_46461897_46462081	0.0031838	SOX2.p2	NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr3_+_134601479_134601617	0.00317808	SOX2.p2	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin	U48224|BFSP2|8419|beaded filament structural protein 2, phakinin
hg18_v1_chr6_-_84197370_84197453	0.00316927	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg18_v1_chrX_+_136475979_136476011	0.00316519	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	NM_003413|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr17_+_77261457_77261475	0.00316267	SOX2.p2	
hg18_v1_chr10_+_13243553_13243595	0.00315624	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr12_-_55040183_55040303	0.00315365	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr7_-_116854765_116854812	0.00314607	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr12_-_46439127_46439155	0.00314148	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr7_-_8268666_8268730	0.00312252	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr11_-_107234702_107234729	0.0030883	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chrX_+_87888881_87888911	0.00307863	SOX2.p2	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1	NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1	AK098646|CPXCR1|53336|CPX chromosome region, candidate 1	AK313768|CPXCR1|53336|CPX chromosome region, candidate 1	BC027614|CPXCR1|53336|CPX chromosome region, candidate 1
hg18_v1_chr4_-_166253453_166253497	0.00306703	SOX2.p2	CR590819|TMEM192|201931|transmembrane protein 192	NM_001100389|TMEM192|201931|transmembrane protein 192
hg18_v1_chr22_-_49062461_49062489	0.00306624	SOX2.p2	AK074932|PLXNB2|23654|plexin B2	AK126394|PLXNB2|23654|plexin B2
hg18_v1_chr19_+_4983899_4983900	0.00304211	SOX2.p2	
hg18_v1_chr22_-_16637160_16637189	0.00303996	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg18_v1_chr17_+_77261447_77261453	0.00301252	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr5_+_125828685_125828745	0.00298545	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr11_-_17454995_17455030	0.00297777	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg18_v1_chr8_+_143542378_143542378	0.0029763	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg18_v1_chr4_-_41579325_41579348	0.00296001	SOX2.p2	
hg18_v1_chr10_+_35575958_35575958	0.00295531	SOX2.p2	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg18_v1_chr5_-_36912487_36912554	0.00292357	SOX2.p2	AK000901|LOC646719|646719|hypothetical LOC646719
hg18_v1_chr2_-_74455161_74455369	0.00292212	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chr12_+_108310906_108310906	0.00287063	SOX2.p2	NM_001101421|MYO1H|283446|myosin IH
hg18_v1_chr7_+_100047877_100048139	0.00286688	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3	CR608430|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr20_-_61317891_61318046	0.00286364	SOX2.p2	BC050284|YTHDF1|54915|YTH domain family, member 1	NM_017798|YTHDF1|54915|YTH domain family, member 1
hg18_v1_chr5_+_109053034_109053054	0.0028557	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr11_-_83661878_83661970	0.00284676	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chrX_-_74659810_74659877	0.00280885	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr6_-_88468591_88468665	0.00279309	SOX2.p2	BC000764|AKIRIN2|55122|akirin 2	BC003042|AKIRIN2|55122|akirin 2	CR599380|AKIRIN2|55122|akirin 2
hg18_v1_chr1_-_152459697_152459896	0.00275496	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg18_v1_chr9_-_32542550_32542568	0.00273301	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr19_+_63262418_63262480	0.00271179	SOX2.p2	AK098011|ZNF135|7694|zinc finger protein 135	NM_001164527|ZNF135|7694|zinc finger protein 135	NM_001164529|ZNF135|7694|zinc finger protein 135	NM_001164530|ZNF135|7694|zinc finger protein 135	NM_003436|ZNF135|7694|zinc finger protein 135	NM_007134|ZNF135|7694|zinc finger protein 135	AK297226|ZNF135|7694|zinc finger protein 135	BC046434|ZNF135|7694|zinc finger protein 135	AK295110|ZNF135|7694|zinc finger protein 135	BX647775|ZNF135|7694|zinc finger protein 135	AK094202|ZNF135|7694|zinc finger protein 135	AL833637|ZNF135|7694|zinc finger protein 135
hg18_v1_chr20_-_55718351_55718439	0.00270127	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr17_-_77261028_77261358	0.00269534	SOX2.p2	CR615218|ARL16|339231|ADP-ribosylation factor-like 16	BC063687|ARL16|339231|ADP-ribosylation factor-like 16	CR598237|ARL16|339231|ADP-ribosylation factor-like 16	CR616295|ARL16|339231|ADP-ribosylation factor-like 16	AK303526|ARL16|339231|ADP-ribosylation factor-like 16	BC042380|ARL16|339231|ADP-ribosylation factor-like 16	AK304718|ARL16|339231|ADP-ribosylation factor-like 16	AK095847|ARL16|339231|ADP-ribosylation factor-like 16	BC105076|ARL16|339231|ADP-ribosylation factor-like 16	BC105078|ARL16|339231|ADP-ribosylation factor-like 16	NM_001040025|ARL16|339231|ADP-ribosylation factor-like 16
hg18_v1_chr16_+_79626817_79627211	0.00269471	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr20_+_56989717_56989772	0.0026886	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	CR615187|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr5_-_149446319_149446359	0.00268852	SOX2.p2	AB208819|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr14_-_36058648_36058653	0.00268781	SOX2.p2	CR604190|NKX2-1|7080|NK2 homeobox 1	NM_003317|NKX2-1|7080|NK2 homeobox 1	U33749|NKX2-1|7080|NK2 homeobox 1
hg18_v1_chr3_-_36961539_36961610	0.00267813	SOX2.p2	NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1
hg18_v1_chr6_-_132980901_132980924	0.00266877	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr1_-_91259601_91259625	0.00266232	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr20_-_30795035_30795057	0.00266002	SOX2.p2	BC047440|COMMD7|149951|COMM domain containing 7
hg18_v1_chr16_-_83703496_83703614	0.00264628	SOX2.p2	BC093665|FAM92B|339145|family with sequence similarity 92, member B	BC111944|FAM92B|339145|family with sequence similarity 92, member B	AK126284|FAM92B|339145|family with sequence similarity 92, member B	NM_198491|FAM92B|339145|family with sequence similarity 92, member B
hg18_v1_chr12_-_43556899_43556899	0.00263316	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr5_+_140154627_140154733	0.00263136	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg18_v1_chr20_-_49592444_49592649	0.00261026	SOX2.p2	EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chrX_-_13247946_13248172	0.00260573	SOX2.p2	AB050195|ATXN3L|92552|ataxin 3-like	BC137186|ATXN3L|92552|ataxin 3-like	BC137187|ATXN3L|92552|ataxin 3-like
hg18_v1_chr9_-_32542573_32542632	0.00259536	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr2_+_206732575_206732713	0.00259357	SOX2.p2	S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR626082|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg18_v1_chr16_+_30326077_30326235	0.00258292	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr3_+_52788976_52788981	0.00258084	SOX2.p2	AK303156|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166435|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166436|ITIH1|3697|inter-alpha (globulin) inhibitor H1	AK303110|ITIH1|3697|inter-alpha (globulin) inhibitor H1
hg18_v1_chr13_-_51631501_51631510	0.00257394	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr12_-_100748640_100748794	0.00255777	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr3_+_134985566_134985566	0.00253706	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chr3_-_130641365_130641451	0.00252524	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr11_+_71221893_71221893	0.00250587	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr11_-_35397675_35397683	0.00248328	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr11_+_13646806_13646820	0.00248085	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr12_+_6950204_6950336	0.00247912	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr4_-_39205316_39205489	0.00246443	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr19_+_45546369_45546492	0.00243207	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr1_-_1157237_1157273	0.00242973	SOX2.p2	AK075352|SDF4|51150|stromal cell derived factor 4	BC022375|SDF4|51150|stromal cell derived factor 4	AK027277|SDF4|51150|stromal cell derived factor 4	CR604861|SDF4|51150|stromal cell derived factor 4	AF153686|SDF4|51150|stromal cell derived factor 4	AF178986|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr2_-_206659140_206659172	0.00242023	SOX2.p2	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chrX_+_144136798_144136798	0.0023831	SOX2.p2	DQ336118|SPANXN1|494118|SPANX family, member N1	DQ336119|SPANXN1|494118|SPANX family, member N1	DQ336120|SPANXN1|494118|SPANX family, member N1	DQ336121|SPANXN1|494118|SPANX family, member N1	NM_001009614|SPANXN1|494118|SPANX family, member N1
hg18_v1_chr7_-_50103335_50103405	0.00236112	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg18_v1_chr3_+_130641840_130641865	0.00235816	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	CR614053|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr22_-_49317408_49317455	0.00233176	SOX2.p2	BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B	BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B
hg18_v1_chr2_-_55130963_55131090	0.00232967	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg18_v1_chr19_-_55706156_55706288	0.00231311	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg18_v1_chr2_-_171631728_171631728	0.00230796	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chr11_-_118571793_118571793	0.0022985	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg18_v1_chr2_+_219354692_219354744	0.00228365	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr2_+_39746525_39746618	0.00228146	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr11_-_60886038_60886415	0.00227436	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr8_-_86441115_86441194	0.00222105	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg18_v1_chr9_-_139202831_139202842	0.00221167	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr12_+_47009029_47009081	0.00213834	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg18_v1_chr16_-_4502980_4503124	0.00213059	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr3_+_101694244_101694302	0.00209677	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr2_-_87156616_87157071	0.00208487	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg18_v1_chr8_+_18072250_18072250	0.00208383	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg18_v1_chr7_+_80145461_80145547	0.00208182	SOX2.p2	CR604329|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr5_+_54434230_54434267	0.00207149	SOX2.p2	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg18_v1_chr17_+_7427877_7427915	0.00206357	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR609049|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR601665|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR600077|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR591406|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR618168|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR610474|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr11_-_73559507_73559926	0.0020557	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg18_v1_chr17_-_8020332_8020438	0.00205438	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg18_v1_chr3_-_130641539_130641584	0.00203531	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr17_-_71580117_71580170	0.00203404	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr2_-_25245062_25245062	0.00202329	SOX2.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg18_v1_chr1_-_59022275_59022372	0.00200266	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg18_v1_chr19_+_10625896_10625985	0.00199648	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr6_+_43089947_43089949	0.00199314	SOX2.p2	CR622022|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr6_-_108688817_108688856	0.00198215	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg18_v1_chr6_+_88174408_88174462	0.0019601	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chr6_+_71333327_71333366	0.00192837	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chr19_-_6230927_6231004	0.0018825	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg18_v1_chrX_-_16798096_16798360	0.0018543	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	CR611848|RBBP7|5931|retinoblastoma binding protein 7	CR620066|RBBP7|5931|retinoblastoma binding protein 7	CR624515|RBBP7|5931|retinoblastoma binding protein 7	CR596205|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7	CR615058|RBBP7|5931|retinoblastoma binding protein 7	CR592155|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr16_+_30326864_30326977	0.00184409	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg18_v1_chr20_+_57612996_57613103	0.00183081	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg18_v1_chr5_-_60493903_60493967	0.00181943	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr14_+_69148066_69148222	0.00181598	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg18_v1_chr1_-_223683141_223683141	0.00179055	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr21_-_30791298_30791342	0.00178694	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg18_v1_chr6_+_43089991_43090000	0.0017672	SOX2.p2	CR598438|KLHDC3|116138|kelch domain containing 3	BC000295|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr20_-_32728749_32728749	0.0017658	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr9_-_139564656_139564806	0.00176519	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr11_-_65382313_65382379	0.00171724	SOX2.p2	CR617396|CFL1|1072|cofilin 1 (non-muscle)	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg18_v1_chr7_-_139825802_139825837	0.00170118	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr1_-_151549790_151549817	0.00168862	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chrX_-_74660024_74660061	0.0016873	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr3_+_180763440_180763575	0.00168702	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	CR621230|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg18_v1_chr6_-_105414401_105414435	0.00163142	SOX2.p2	AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr2_-_163403274_163403467	0.00160514	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg18_v1_chrX_-_74659572_74659590	0.00159944	SOX2.p2	
hg18_v1_chr8_-_94046891_94046992	0.00158554	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg18_v1_chr8_-_87590097_87590127	0.00158407	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg18_v1_chr7_-_157054403_157054504	0.00158102	SOX2.p2	CR590102|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR596761|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR604034|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg18_v1_chr13_-_51631673_51631785	0.00156829	SOX2.p2	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr5_+_96296842_96296856	0.00156319	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr3_-_158704056_158704108	0.00155829	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chrX_-_119487183_119487261	0.00155251	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr1_-_153560532_153560600	0.00154951	SOX2.p2	BC080538|C1orf104|284618|chromosome 1 open reading frame 104	NM_001039517|C1orf104|284618|chromosome 1 open reading frame 104	BC062571|C1orf104|284618|chromosome 1 open reading frame 104
hg18_v1_chr8_-_17986690_17986787	0.00154173	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr2_-_224410544_224410564	0.0015401	SOX2.p2	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr8_-_144313053_144313076	0.00152395	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr11_-_71469082_71469247	0.00151741	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr1_-_31485320_31485324	0.00151656	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr5_+_132237253_132237258	0.00151436	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chr4_+_100714995_100715066	0.00149712	SOX2.p2	AK225328|MTTP|4547|microsomal triglyceride transfer protein	BC062696|MTTP|4547|microsomal triglyceride transfer protein	X59657|MTTP|4547|microsomal triglyceride transfer protein	AK290793|MTTP|4547|microsomal triglyceride transfer protein	CR596497|MTTP|4547|microsomal triglyceride transfer protein	BC125110|MTTP|4547|microsomal triglyceride transfer protein	BC125111|MTTP|4547|microsomal triglyceride transfer protein	X75500|MTTP|4547|microsomal triglyceride transfer protein	X91148|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr2_+_61243132_61243132	0.00149052	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr14_-_74669864_74669883	0.00147575	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg18_v1_chr19_+_38867273_38867273	0.00146913	SOX2.p2	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg18_v1_chr12_-_16321885_16321885	0.00144006	SOX2.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr10_+_70172257_70172311	0.00143042	SOX2.p2	AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr2_+_198088559_198088564	0.00142408	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chrX_+_102078855_102078855	0.00141564	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg18_v1_chr5_-_98290117_98290139	0.00140505	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr1_-_1701313_1701367	0.00135338	SOX2.p2	AF250320|NADK|65220|NAD kinase	NM_001198994|NADK|65220|NAD kinase
hg18_v1_chr12_+_49155798_49155910	0.00135204	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chr17_+_35038276_35038299	0.00134202	SOX2.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg18_v1_chr10_-_104252394_104252501	0.00133774	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr14_-_73962557_73962557	0.00133756	SOX2.p2	NM_001105579|TMEM90A|646658|transmembrane protein 90A
hg18_v1_chr3_+_10043139_10043182	0.00132538	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr7_-_148212310_148212311	0.0013241	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr8_-_93144366_93144366	0.00131651	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr8_-_144313100_144313129	0.00130456	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr4_+_37131946_37131994	0.00129204	SOX2.p2	NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19	BC037906|C4orf19|55286|chromosome 4 open reading frame 19
hg18_v1_chr9_-_129679760_129679842	0.00129004	SOX2.p2	BC001116|AK1|203|adenylate kinase 1	BC036803|AK1|203|adenylate kinase 1	AK313758|AK1|203|adenylate kinase 1	BC100022|AK1|203|adenylate kinase 1	NM_000476|AK1|203|adenylate kinase 1
hg18_v1_chr5_+_161207517_161207517	0.00127282	SOX2.p2	NM_001127644|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr7_-_2561853_2561930	0.00127052	SOX2.p2	AK131083|BAAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BAAT1|221927|BRCA1-associated ATM activator 1
hg18_v1_chr16_-_29845040_29845071	0.00125256	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr14_+_37746937_37746954	0.00123321	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg18_v1_chr3_-_102522093_102522131	0.00122247	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr2_-_234441766_234441786	0.00122157	SOX2.p2	AK301707|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr3_-_157755603_157755671	0.00119049	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr15_+_78775008_78775120	0.00117406	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg18_v1_chr13_-_83354425_83354428	0.00115722	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr1_-_245561753_245561836	0.00115719	SOX2.p2	CR610381|ZNF496|84838|zinc finger protein 496
hg18_v1_chr1_+_166461881_166461953	0.00112579	SOX2.p2	BC068098|SFT2D2|375035|SFT2 domain containing 2
hg18_v1_chr19_-_9799469_9799539	0.0011067	SOX2.p2	CR592319|FBXL12|54850|F-box and leucine-rich repeat protein 12	CR614447|FBXL12|54850|F-box and leucine-rich repeat protein 12
hg18_v1_chr16_+_65195435_65195560	0.00108408	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr11_+_12355600_12355770	0.00107428	SOX2.p2	AK098504|PARVA|55742|parvin, alpha	CR624090|PARVA|55742|parvin, alpha	AF237771|PARVA|55742|parvin, alpha	AK022316|PARVA|55742|parvin, alpha	BC016713|PARVA|55742|parvin, alpha	CR612774|PARVA|55742|parvin, alpha	CR590611|PARVA|55742|parvin, alpha	AK001655|PARVA|55742|parvin, alpha	NM_018222|PARVA|55742|parvin, alpha	CR612241|PARVA|55742|parvin, alpha	BC014535|PARVA|55742|parvin, alpha	CR599976|PARVA|55742|parvin, alpha	EU832601|PARVA|55742|parvin, alpha	AF325830|PARVA|55742|parvin, alpha
hg18_v1_chr16_+_65620610_65620648	0.00107098	SOX2.p2	CR618498|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr5_-_157011665_157011748	0.00107084	SOX2.p2	
hg18_v1_chr6_+_148705646_148705720	0.00106443	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr11_-_64302720_64302748	0.001036	SOX2.p2	Y08766|SF1|7536|splicing factor 1
hg18_v1_chr4_+_30331543_30331572	0.00101084	SOX2.p2	AB006756|PCDH7|5099|protocadherin 7
hg18_v1_chr8_-_95343716_95343740	0.000992688	SOX2.p2	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle	BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle	CR603445|GEM|2669|GTP binding protein overexpressed in skeletal muscle
hg18_v1_chrX_-_74659596_74659604	0.000983757	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr6_-_105414475_105414488	0.000982848	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr17_-_44047299_44047299	0.000955663	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg18_v1_chr1_-_240228987_240229007	0.000947769	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chr19_+_62483093_62483243	0.000944759	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr1_-_67292286_67292443	0.000923998	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr17_+_58981708_58981781	0.000899965	SOX2.p2	CR606772|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr10_+_71232281_71232313	0.000899523	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg18_v1_chr5_-_10814179_10814340	0.000889439	SOX2.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chr6_+_43089978_43089979	0.000871344	SOX2.p2	CR614507|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr3_-_187562470_187562787	0.000855649	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg18_v1_chr8_-_33577033_33577042	0.000842977	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr2_+_210575600_210575630	0.000814667	SOX2.p2	BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase	CR625804|RPE|6120|ribulose-5-phosphate-3-epimerase	AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase	AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase	AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase	AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase	AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase	AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase	BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase	BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase	CR621657|RPE|6120|ribulose-5-phosphate-3-epimerase	NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase	EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase	EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase
hg18_v1_chrX_-_11593741_11593741	0.000805668	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr12_+_99185334_99185679	0.000799714	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr17_-_44794325_44794833	0.000780833	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr10_+_104253716_104253903	0.000771902	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr19_-_46561841_46561917	0.000757791	SOX2.p2	BC004157|B9D2|80776|B9 protein domain 2	BC004444|B9D2|80776|B9 protein domain 2	NM_030578|B9D2|80776|B9 protein domain 2
hg18_v1_chr3_-_110517929_110518053	0.000745971	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg18_v1_chr2_+_196230096_196230210	0.000731396	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr19_+_46462113_46462121	0.000728342	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr5_-_16791346_16791495	0.000716961	SOX2.p2	AK295736|MYO10|4651|myosin X
hg18_v1_chr15_+_40628283_40628359	0.000716416	SOX2.p2	NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2	NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2	BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2
hg18_v1_chr5_-_149446182_149446259	0.000714874	SOX2.p2	EU826593|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr15_+_67393795_67393795	0.000698788	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr19_-_11477689_11477754	0.000696564	SOX2.p2	AK131037|ZNF653|115950|zinc finger protein 653	NM_138783|ZNF653|115950|zinc finger protein 653
hg18_v1_chrX_-_142432884_142432972	0.000695797	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr16_+_3473476_3473618	0.000691444	SOX2.p2	AK095819|NAT15|79903|N-acetyltransferase 15 (GCN5-related, putative)
hg18_v1_chr8_+_38877909_38878027	0.000690215	SOX2.p2	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg18_v1_chr19_+_18391211_18391240	0.000677682	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4	BC000274|SSBP4|170463|single stranded DNA binding protein 4	CR608876|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg18_v1_chr12_+_103904203_103904237	0.000640106	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr5_-_41107161_41107200	0.000631448	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg18_v1_chr6_+_30796121_30796122	0.000630498	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chr5_-_122786902_122787184	0.00060029	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg18_v1_chr19_-_57366707_57366707	0.00059578	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg18_v1_chr11_+_94439703_94439929	0.000589501	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr2_-_108517028_108517127	0.000586825	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr5_+_128823904_128824001	0.00058334	SOX2.p2	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19	NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19
hg18_v1_chr19_+_9334695_9334695	0.000575151	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr14_+_92459197_92459197	0.000570299	SOX2.p2	NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)
hg18_v1_chr16_+_73590739_73590783	0.00056922	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg18_v1_chr12_-_67643286_67643287	0.000544538	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg18_v1_chr2_-_47257117_47257144	0.000537937	SOX2.p2	CR590655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR601833|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605532|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606009|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR618742|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR624584|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR625162|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR591343|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR593656|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR594016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR597132|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617592|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605025|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605737|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR607372|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617995|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606757|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR615210|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg18_v1_chr20_-_61355108_61355249	0.000527886	SOX2.p2	AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4
hg18_v1_chr3_+_195688974_195689208	0.000506145	SOX2.p2	AK091527|FLJ34208|401106|hypothetical LOC401106
hg18_v1_chr5_-_49772940_49772958	0.000505809	SOX2.p2	CR621536|EMB|133418|embigin	AK300860|EMB|133418|embigin	BC059398|EMB|133418|embigin
hg18_v1_chr16_-_30529129_30529185	0.000496776	SOX2.p2	AK310459|ZNF689|115509|zinc finger protein 689	AB065282|ZNF689|115509|zinc finger protein 689	BC014000|ZNF689|115509|zinc finger protein 689	NM_138447|ZNF689|115509|zinc finger protein 689
hg18_v1_chr16_-_626293_626374	0.000484779	SOX2.p2	AK294482|C16orf13|84326|chromosome 16 open reading frame 13	AK295628|C16orf13|84326|chromosome 16 open reading frame 13	BC047118|C16orf13|84326|chromosome 16 open reading frame 13	AK057077|C16orf13|84326|chromosome 16 open reading frame 13	BC007207|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13	NM_032366|C16orf13|84326|chromosome 16 open reading frame 13
hg18_v1_chr4_-_70539922_70539948	0.000481567	SOX2.p2	NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2
hg18_v1_chr1_+_156716290_156716291	0.0004585	SOX2.p2	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2
hg18_v1_chr1_+_117404467_117404487	0.00045461	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr11_+_56187713_56187737	0.000450876	SOX2.p2	BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1	NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1
hg18_v1_chr12_+_122762835_122762863	0.000447798	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr12_-_54938385_54938447	0.00043763	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr17_+_43328514_43328645	0.000435123	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg18_v1_chr1_+_199108705_199108788	0.000420833	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg18_v1_chr11_+_63463009_63463111	0.000419936	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg18_v1_chr17_-_77092569_77092729	0.000414325	SOX2.p2	CR603292|ACTG1|71|actin, gamma 1	CR610785|ACTG1|71|actin, gamma 1	CR608395|ACTG1|71|actin, gamma 1	CR624832|ACTG1|71|actin, gamma 1
hg18_v1_chr6_+_43090004_43090044	0.000413846	SOX2.p2	CR603335|KLHDC3|116138|kelch domain containing 3	BC001793|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr16_+_87741416_87741478	0.000411187	SOX2.p2	
hg18_v1_chr6_-_87861492_87861568	0.000399601	SOX2.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	CR615870|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591147|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611908|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591068|CGA|1081|glycoprotein hormones, alpha polypeptide	CR596397|CGA|1081|glycoprotein hormones, alpha polypeptide	CR598298|CGA|1081|glycoprotein hormones, alpha polypeptide	CR616045|CGA|1081|glycoprotein hormones, alpha polypeptide	CR626155|CGA|1081|glycoprotein hormones, alpha polypeptide	CR607107|CGA|1081|glycoprotein hormones, alpha polypeptide	CR595519|CGA|1081|glycoprotein hormones, alpha polypeptide	CR599056|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611195|CGA|1081|glycoprotein hormones, alpha polypeptide	CR602651|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	CR610488|CGA|1081|glycoprotein hormones, alpha polypeptide	CR622170|CGA|1081|glycoprotein hormones, alpha polypeptide
hg18_v1_chrX_-_41667174_41667365	0.00038315	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr20_-_32728517_32728593	0.000373603	SOX2.p2	CR610914|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr7_-_126679540_126679663	0.000357355	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr6_-_76010231_76010363	0.000353654	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr1_-_153480980_153481276	0.00035203	SOX2.p2	AK311242|GBA|2629|glucosidase, beta, acid	CR616044|GBA|2629|glucosidase, beta, acid	CR609535|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg18_v1_chr17_+_56032271_56032381	0.000343841	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr8_+_17824631_17824722	0.000336707	SOX2.p2	L27841|PCM1|5108|pericentriolar material 1	NM_006197|PCM1|5108|pericentriolar material 1
hg18_v1_chr10_-_64246080_64246127	0.000333548	SOX2.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg18_v1_chr10_+_101078784_101078845	0.000327672	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg18_v1_chr13_+_81162030_81162069	0.000313534	SOX2.p2	
hg18_v1_chr6_-_43089528_43089605	0.000291219	SOX2.p2	BT009831|MEA1|4201|male-enhanced antigen 1	L10400|MEA1|4201|male-enhanced antigen 1	M27937|MEA1|4201|male-enhanced antigen 1	BC001754|MEA1|4201|male-enhanced antigen 1	NM_014623|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr6_-_105414440_105414471	0.000277003	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr12_+_103904243_103904259	0.00026813	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr15_+_58083712_58083729	0.000217129	SOX2.p2	AK290944|FOXB1|27023|forkhead box B1	NM_012182|FOXB1|27023|forkhead box B1
hg18_v1_chr13_-_51631996_51631996	0.000211528	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr15_+_58083798_58083884	0.000163477	SOX2.p2	AK314075|FOXB1|27023|forkhead box B1
hg18_v1_chr1_+_200124412_200124439	0.000157632	SOX2.p2	AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr11_-_82675024_82675082	0.000143897	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg18_v1_chr12_+_6473552_6473558	0.000137333	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr7_-_127833231_127833275	0.000135081	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg18_v1_chr19_+_46462816_46462825	0.00013468	SOX2.p2	AK290729|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr6_-_74286876_74286906	0.00012256	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr14_+_72672913_72672914	0.000122235	SOX2.p2	BC011729|PSEN1|5663|presenilin 1
hg18_v1_chr5_+_140780720_140780786	0.000109422	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr5_+_121675284_121675339	9.13635e-05	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr6_+_126112588_126112615	8.76387e-05	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr19_-_22744623_22744623	7.40761e-05	SOX2.p2	NM_001080409|ZNF99|7652|zinc finger protein 99
hg18_v1_chr5_-_49772973_49773028	7.35911e-05	SOX2.p2	NM_198449|EMB|133418|embigin
hg18_v1_chr10_+_28862514_28862591	7.12673e-05	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr3_-_127856563_127856646	7.07847e-05	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg18_v1_chr12_+_54172413_54172413	6.68046e-05	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr1_+_63605912_63605925	5.33191e-05	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr1_+_224064365_224064425	4.80588e-05	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chrX_+_136476353_136476514	4.64306e-05	SOX2.p2	EU532020|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113393|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113395|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr8_+_19841120_19841170	4.6017e-05	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg18_v1_chr1_+_20081424_20081478	3.64617e-05	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg18_v1_chr2_+_241023908_241023968	3.49772e-05	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg18_v1_chr17_+_70092651_70092651	8.14084e-06	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg18_v1_chr13_-_48916144_48916221	7.57677e-06	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
