hg18_v1_chr7_-_27186400_27186400	5.34743	SOX2.p2	NM_153715|HOXA10|3206|homeobox A10
hg18_v1_chr3_-_150533948_150534237	5.05762	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg18_v1_chr12_-_6103945_6104096	3.12282	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg18_v1_chr10_+_70517823_70517861	3.01076	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr10_+_70517863_70517960	3.00213	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr1_-_171441234_171441319	2.89103	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr4_+_86918882_86918963	2.83994	SOX2.p2	BC098580|ARHGAP24|83478|Rho GTPase activating protein 24	AK098193|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chrX_+_86659370_86659552	2.81814	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr4_-_101658094_101658272	2.69639	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg18_v1_chr1_+_66570363_66570520	2.62185	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr7_+_102340579_102340757	2.48435	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr2_-_188021117_188021265	2.48084	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chrX_+_15428820_15428960	2.41945	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr1_-_32574185_32574443	2.39883	SOX2.p2	CR602280|MARCKSL1|65108|MARCKS-like 1	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	CR593904|MARCKSL1|65108|MARCKS-like 1	CR611715|MARCKSL1|65108|MARCKS-like 1	CR611461|MARCKSL1|65108|MARCKS-like 1	CR607885|MARCKSL1|65108|MARCKS-like 1	CR625318|MARCKSL1|65108|MARCKS-like 1	CR599424|MARCKSL1|65108|MARCKS-like 1	CR608551|MARCKSL1|65108|MARCKS-like 1	CR603178|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	CR595141|MARCKSL1|65108|MARCKS-like 1	CR595693|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	CR602564|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1	CR625187|MARCKSL1|65108|MARCKS-like 1	CR590657|MARCKSL1|65108|MARCKS-like 1	CR594797|MARCKSL1|65108|MARCKS-like 1	CR596259|MARCKSL1|65108|MARCKS-like 1	CR596703|MARCKSL1|65108|MARCKS-like 1	CR596974|MARCKSL1|65108|MARCKS-like 1	CR597180|MARCKSL1|65108|MARCKS-like 1	CR599096|MARCKSL1|65108|MARCKS-like 1	CR617460|MARCKSL1|65108|MARCKS-like 1	CR621540|MARCKSL1|65108|MARCKS-like 1	CR624801|MARCKSL1|65108|MARCKS-like 1
hg18_v1_chr6_+_153060722_153060874	2.39675	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr9_+_18464138_18464228	2.38461	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr10_-_32707549_32707737	2.38407	SOX2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr1_-_197173159_197173182	2.36996	SOX2.p2	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor
hg18_v1_chr5_+_15553736_15553760	2.30787	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr17_-_59817456_59817545	2.29105	SOX2.p2	AK304166|PECAM1|5175|platelet/endothelial cell adhesion molecule	DQ893644|PECAM1|5175|platelet/endothelial cell adhesion molecule	AK290692|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr9_+_18464090_18464103	2.25334	SOX2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr13_-_98428244_98428338	2.2163	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr17_-_59817575_59817633	2.20675	SOX2.p2	AF281287|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281288|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281289|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281290|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281291|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281292|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281293|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281294|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281295|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281296|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281297|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281298|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281299|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281300|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281301|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393676|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393677|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393678|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr7_+_27190688_27190810	2.19392	SOX2.p2	
hg18_v1_chr2_-_110665188_110665188	2.17349	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr5_-_111119846_111119846	2.14318	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr17_-_59817654_59817680	2.13606	SOX2.p2	M37780|PECAM1|5175|platelet/endothelial cell adhesion molecule	M28526|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr17_-_59817722_59817742	2.13001	SOX2.p2	BC022512|PECAM1|5175|platelet/endothelial cell adhesion molecule	BC051822|PECAM1|5175|platelet/endothelial cell adhesion molecule	NM_000442|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr6_+_130381408_130381428	2.08384	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg18_v1_chr7_-_27190882_27190893	2.07374	SOX2.p2	CR612696|HOXA11|3207|homeobox A11
hg18_v1_chr5_+_15553288_15553310	2.02052	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr3_+_148593911_148593934	2.01708	SOX2.p2	
hg18_v1_chr5_+_15553539_15553549	2.00583	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr2_+_108637916_108637940	1.9814	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr2_+_110013297_110013297	1.96823	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr8_-_6407882_6408337	1.94161	SOX2.p2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	CR620685|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg18_v1_chr21_-_38792173_38792297	1.9348	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr2_-_198248828_198249012	1.93394	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chr2_+_108637698_108637699	1.90351	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr17_-_18890963_18891070	1.88754	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	CR615744|GRAP|10750|GRB2-related adaptor protein	CR624975|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	CR600595|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein	CR595033|GRAP|10750|GRB2-related adaptor protein
hg18_v1_chr6_+_12398514_12398644	1.87097	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	CR605456|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	CR602522|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg18_v1_chr7_-_11838260_11838369	1.8549	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr17_-_59818033_59818157	1.8333	SOX2.p2	X96849|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr15_-_80125403_80125440	1.81374	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr15_-_80125514_80125549	1.78887	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr1_+_242281199_242281214	1.76522	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr14_+_76298693_76298917	1.73489	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg18_v1_chr5_-_100266769_100266886	1.71976	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr2_-_56266408_56266418	1.6933	SOX2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr9_+_115303527_115303677	1.67738	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr13_-_98757634_98757749	1.61546	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr12_-_68369322_68369323	1.60143	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr1_+_22107137_22107137	1.58913	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr9_+_89302574_89302803	1.5813	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr7_-_27171673_27171685	1.57595	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg18_v1_chr6_-_56824371_56824452	1.56648	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chr3_+_174598937_174598937	1.55804	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr13_+_110653407_110653440	1.55774	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr11_+_113436438_113436497	1.52006	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg18_v1_chr11_+_5667494_5667687	1.50939	SOX2.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr1_-_47468029_47468029	1.50591	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg18_v1_chr2_-_37752272_37752294	1.50535	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr9_-_72673753_72673808	1.50448	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg18_v1_chr13_-_32658215_32658215	1.49649	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr1_+_242283129_242283204	1.4916	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr9_+_27099138_27099146	1.49003	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr6_-_139654807_139654900	1.47978	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg18_v1_chr18_+_13601664_13601664	1.47373	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr5_+_15553768_15553785	1.4447	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr7_-_27180398_27180479	1.44414	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg18_v1_chr15_+_37330176_37330258	1.41886	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg18_v1_chr9_+_126460511_126460540	1.41411	SOX2.p2	
hg18_v1_chr15_-_68781662_68781700	1.37747	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr9_+_89302239_89302573	1.37557	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr8_-_108579270_108579458	1.36737	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr16_+_64958086_64958120	1.32167	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr16_+_64958060_64958063	1.30289	SOX2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr18_-_21186107_21186215	1.30191	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr16_+_64958025_64958043	1.29668	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr3_-_115826481_115826488	1.29122	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr3_+_25444753_25444805	1.28171	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr3_+_25444837_25444905	1.2812	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr17_-_44006808_44006847	1.26465	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr6_+_21774624_21774653	1.25513	SOX2.p2	AK300802|FLJ22536|401237|hypothetical locus LOC401237	AK026189|FLJ22536|401237|hypothetical locus LOC401237
hg18_v1_chrX_-_33139349_33139593	1.24019	SOX2.p2	M63073|DMD|1756|dystrophin	M63074|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg18_v1_chr9_-_116190038_116190184	1.23852	SOX2.p2	AY703041|AKNA|80709|AT-hook transcription factor	AY703042|AKNA|80709|AT-hook transcription factor	AK131082|AKNA|80709|AT-hook transcription factor	AK160382|AKNA|80709|AT-hook transcription factor	AB075848|AKNA|80709|AT-hook transcription factor
hg18_v1_chr3_-_11660395_11660398	1.22411	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr14_-_90953883_90953912	1.22056	SOX2.p2	CR606047|CCDC88C|440193|coiled-coil domain containing 88C	NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C	AF070587|CCDC88C|440193|coiled-coil domain containing 88C	CR607628|CCDC88C|440193|coiled-coil domain containing 88C
hg18_v1_chr15_+_64781723_64781734	1.21762	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr15_+_21361546_21361546	1.21579	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr1_-_85816520_85816637	1.21287	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr17_-_30783631_30783655	1.20936	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr13_-_22905822_22905859	1.20849	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr3_-_115825742_115825742	1.20475	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr17_+_18971506_18971506	1.20189	SOX2.p2	BC157869|GRAPL|400581|GRB2-related adaptor protein-like	NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like
hg18_v1_chr1_-_95165089_95165368	1.19321	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr5_+_95093267_95093318	1.19238	SOX2.p2	
hg18_v1_chrX_+_28515479_28515601	1.16827	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg18_v1_chr1_-_85703198_85703228	1.16824	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr2_-_128138435_128138636	1.1617	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg18_v1_chr15_-_80123935_80123941	1.1556	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chrX_+_84385693_84385791	1.14763	SOX2.p2	BC006349|ZNF711|7552|zinc finger protein 711	AK308097|ZNF711|7552|zinc finger protein 711
hg18_v1_chrX_+_12904207_12904321	1.13721	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr4_-_138673078_138673107	1.1283	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr7_+_134114912_134114947	1.12554	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg18_v1_chr7_+_93388951_93389086	1.12264	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR622777|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR596301|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR592688|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR603702|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR590486|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg18_v1_chr3_+_182900081_182900092	1.11647	SOX2.p2	BC016393|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)
hg18_v1_chr4_+_86918870_86918874	1.11495	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr5_-_88155360_88155499	1.11008	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr12_-_16650687_16650691	1.10048	SOX2.p2	AK312418|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr1_+_84540921_84540921	1.09	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr1_+_43539239_43539329	1.08825	SOX2.p2	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg18_v1_chr6_+_44295219_44295449	1.0809	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr5_-_83715947_83716057	1.07963	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr6_-_56824672_56824674	1.0784	SOX2.p2	AK299898|DST|667|dystonin
hg18_v1_chr2_+_198377561_198377670	1.07744	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr13_-_73606362_73606432	1.07727	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr6_+_116939500_116939528	1.06695	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr12_-_16650697_16650731	1.06365	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	CR598247|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr3_-_192531018_192531018	1.06093	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr10_+_104525877_104526013	1.05213	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg18_v1_chr7_+_134114957_134114968	1.04948	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg18_v1_chr1_+_242281175_242281183	1.03287	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr11_+_128068982_128069034	1.03055	SOX2.p2	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr13_-_32678142_32678186	1.02998	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr12_-_101115677_101115743	1.02926	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg18_v1_chr9_+_4480193_4480681	1.01709	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg18_v1_chr5_-_39460687_39460730	1.01428	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr17_-_1195096_1195116	1.01246	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr11_+_128069165_128069178	1.01199	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr3_-_116272911_116272950	0.998577	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr10_-_88707299_88707404	0.995395	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg18_v1_chr11_+_128069183_128069198	0.99306	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr11_+_128069203_128069327	0.991664	SOX2.p2	CR600005|FLI1|2313|Friend leukemia virus integration 1	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr11_+_111313227_111313360	0.991603	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chrX_+_10084984_10085125	0.990235	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg18_v1_chr1_+_66570683_66570684	0.987408	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr18_-_24011349_24011442	0.973843	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr11_+_128069340_128069364	0.969068	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr4_-_139382672_139382956	0.968463	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr1_-_26105954_26105954	0.957656	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr5_+_88220846_88220907	0.956992	SOX2.p2	
hg18_v1_chrX_+_100692071_100692244	0.956174	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR616090|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg18_v1_chr5_+_95092384_95092865	0.946662	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr9_+_112470871_112471004	0.946586	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr11_+_111313067_111313170	0.944392	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr15_-_93671314_93671332	0.940146	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr5_-_71838875_71839004	0.938216	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg18_v1_chr8_-_60194099_60194353	0.935567	SOX2.p2	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box	DQ894852|TOX|9760|thymocyte selection-associated high mobility group box	AK000971|TOX|9760|thymocyte selection-associated high mobility group box	BC016665|TOX|9760|thymocyte selection-associated high mobility group box	AK302331|TOX|9760|thymocyte selection-associated high mobility group box	AB018351|TOX|9760|thymocyte selection-associated high mobility group box	NM_014729|TOX|9760|thymocyte selection-associated high mobility group box
hg18_v1_chr3_-_143230124_143230196	0.924141	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr7_+_106292975_106293045	0.918861	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr4_-_54119159_54119192	0.916072	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr14_+_76297885_76298532	0.911878	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr1_-_95165037_95165086	0.911126	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg18_v1_chr3_-_58538530_58538530	0.909468	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr8_+_40130143_40130362	0.907303	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	CR594872|C8orf4|56892|chromosome 8 open reading frame 4	CR620271|C8orf4|56892|chromosome 8 open reading frame 4	CR622918|C8orf4|56892|chromosome 8 open reading frame 4	CR600720|C8orf4|56892|chromosome 8 open reading frame 4	CR616793|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4	CR602517|C8orf4|56892|chromosome 8 open reading frame 4	CR618129|C8orf4|56892|chromosome 8 open reading frame 4	CR607025|C8orf4|56892|chromosome 8 open reading frame 4
hg18_v1_chr1_-_79244948_79245082	0.903688	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg18_v1_chrX_+_12903145_12903177	0.89979	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_183049|TMSL3|7117|thymosin-like 3	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	CR621963|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr4_-_54119102_54119112	0.896295	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr11_-_85108030_85108030	0.891784	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr7_-_130891861_130891945	0.88992	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr8_-_124622434_124622628	0.886769	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr3_-_58538110_58538189	0.883807	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	CR607139|FAM107A|11170|family with sequence similarity 107, member A	CR610702|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	CR601858|FAM107A|11170|family with sequence similarity 107, member A	CR621351|FAM107A|11170|family with sequence similarity 107, member A	CR617615|FAM107A|11170|family with sequence similarity 107, member A	CR591615|FAM107A|11170|family with sequence similarity 107, member A	CR609117|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	CR600423|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr8_-_93184629_93184633	0.88342	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_+_47498778_47498966	0.882898	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	BC041811|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	AK289709|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76555|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	U07139|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76556|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	L27584|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg18_v1_chr8_-_93144039_93144111	0.881929	SOX2.p2	
hg18_v1_chr4_+_91035025_91035145	0.863265	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr7_+_22733290_22733406	0.860627	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	CR590965|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr4_-_54119123_54119147	0.859942	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr7_+_106292932_106292967	0.859026	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr10_+_11087345_11087348	0.855304	SOX2.p2	AK299548|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr12_-_47869067_47869133	0.846101	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr11_-_6633427_6633651	0.846025	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr12_-_10142779_10142930	0.844879	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr10_+_80672842_80673430	0.844226	SOX2.p2	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr12_-_47869134_47869153	0.841562	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr19_-_53941835_53941979	0.837075	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg18_v1_chr5_-_83716346_83716494	0.834276	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr1_+_61642287_61642335	0.831824	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chr5_-_111120929_111121032	0.831671	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr15_-_76890626_76890985	0.825981	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg18_v1_chr3_+_44601457_44601463	0.822894	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg18_v1_chr13_-_37341859_37341938	0.822533	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg18_v1_chr7_+_22733626_22733661	0.821883	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr2_-_192419896_192420071	0.815434	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chr14_+_85066207_85066246	0.813194	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr14_+_62740878_62741014	0.812106	SOX2.p2	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	NM_020663|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg18_v1_chr1_+_211190631_211190661	0.80595	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg18_v1_chr12_-_69289889_69289890	0.804194	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr10_+_11087259_11087268	0.798432	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chrX_+_80344253_80344355	0.786526	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR615098|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR620035|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR595122|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR599092|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR593159|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR606366|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr5_-_111120817_111120853	0.785767	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr6_+_121798443_121798605	0.782508	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg18_v1_chr1_+_211190476_211190605	0.777176	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr8_+_67201684_67202105	0.774657	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr10_+_11087280_11087303	0.770989	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr10_+_22765996_22766014	0.769972	SOX2.p2	AK295718|LOC100289455|100289455|hypothetical LOC100289455
hg18_v1_chr22_-_20419975_20420122	0.767768	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr13_-_73605914_73606066	0.758369	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr10_-_92671005_92671011	0.757838	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr5_-_111120764_111120807	0.756116	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr7_-_107430566_107431116	0.754184	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg18_v1_chr15_+_47502666_47502771	0.749097	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr17_+_8154280_8154325	0.74671	SOX2.p2	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr7_-_27171648_27171655	0.741202	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg18_v1_chr2_+_85834111_85834922	0.740879	SOX2.p2	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)	AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)	BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)	AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)	BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)	AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)
hg18_v1_chr7_-_27171600_27171623	0.740639	SOX2.p2	AM393527|HOXA9|3205|homeobox A9	BT006990|HOXA9|3205|homeobox A9	DQ892748|HOXA9|3205|homeobox A9	DQ895994|HOXA9|3205|homeobox A9	U82759|HOXA9|3205|homeobox A9
hg18_v1_chr8_-_93176618_93176665	0.736356	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr4_-_20594645_20594809	0.73574	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr10_+_17310475_17310610	0.734157	SOX2.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr5_-_95184221_95184464	0.728024	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr6_+_30796064_30796120	0.725092	SOX2.p2	CR596206|TUBB|203068|tubulin, beta	CR590041|TUBB|203068|tubulin, beta	BC020946|TUBB|203068|tubulin, beta	AK297638|TUBB|203068|tubulin, beta	CR612441|TUBB|203068|tubulin, beta	CR600522|TUBB|203068|tubulin, beta	CR603136|TUBB|203068|tubulin, beta	CR605261|TUBB|203068|tubulin, beta	CR607420|TUBB|203068|tubulin, beta	CR607899|TUBB|203068|tubulin, beta	CR609910|TUBB|203068|tubulin, beta	CR618191|TUBB|203068|tubulin, beta	CR621916|TUBB|203068|tubulin, beta	CR596434|TUBB|203068|tubulin, beta	CR612543|TUBB|203068|tubulin, beta	CR618223|TUBB|203068|tubulin, beta	CR620673|TUBB|203068|tubulin, beta	AK098772|TUBB|203068|tubulin, beta	AK316265|TUBB|203068|tubulin, beta	BC103746|TUBB|203068|tubulin, beta	CR591348|TUBB|203068|tubulin, beta	CR594633|TUBB|203068|tubulin, beta	CR595089|TUBB|203068|tubulin, beta	CR596247|TUBB|203068|tubulin, beta	CR597982|TUBB|203068|tubulin, beta	CR599767|TUBB|203068|tubulin, beta	CR600785|TUBB|203068|tubulin, beta	CR602430|TUBB|203068|tubulin, beta	CR607126|TUBB|203068|tubulin, beta	CR607488|TUBB|203068|tubulin, beta	CR609662|TUBB|203068|tubulin, beta	CR614355|TUBB|203068|tubulin, beta	CR624075|TUBB|203068|tubulin, beta	CR599197|TUBB|203068|tubulin, beta	AF070600|TUBB|203068|tubulin, beta	AF141349|TUBB|203068|tubulin, beta	CR591054|TUBB|203068|tubulin, beta	CR591420|TUBB|203068|tubulin, beta	CR591713|TUBB|203068|tubulin, beta	CR595490|TUBB|203068|tubulin, beta	CR595961|TUBB|203068|tubulin, beta	CR595996|TUBB|203068|tubulin, beta	CR596256|TUBB|203068|tubulin, beta	CR596438|TUBB|203068|tubulin, beta	CR597262|TUBB|203068|tubulin, beta	CR599140|TUBB|203068|tubulin, beta	CR601668|TUBB|203068|tubulin, beta	CR602389|TUBB|203068|tubulin, beta	CR603568|TUBB|203068|tubulin, beta	CR603794|TUBB|203068|tubulin, beta	CR607721|TUBB|203068|tubulin, beta	CR608555|TUBB|203068|tubulin, beta	CR609919|TUBB|203068|tubulin, beta	CR610704|TUBB|203068|tubulin, beta	CR612087|TUBB|203068|tubulin, beta	CR612807|TUBB|203068|tubulin, beta	CR614275|TUBB|203068|tubulin, beta	CR616066|TUBB|203068|tubulin, beta	CR616650|TUBB|203068|tubulin, beta	CR617178|TUBB|203068|tubulin, beta	CR617269|TUBB|203068|tubulin, beta	CR619635|TUBB|203068|tubulin, beta	CR619755|TUBB|203068|tubulin, beta	CR620097|TUBB|203068|tubulin, beta	CR620403|TUBB|203068|tubulin, beta	CR620727|TUBB|203068|tubulin, beta	CR621493|TUBB|203068|tubulin, beta	CR622048|TUBB|203068|tubulin, beta	CR624306|TUBB|203068|tubulin, beta	CR624565|TUBB|203068|tubulin, beta	CR624579|TUBB|203068|tubulin, beta	CR626370|TUBB|203068|tubulin, beta	CR626396|TUBB|203068|tubulin, beta	CR590523|TUBB|203068|tubulin, beta	CR591033|TUBB|203068|tubulin, beta	CR593116|TUBB|203068|tubulin, beta	CR594628|TUBB|203068|tubulin, beta	CR595191|TUBB|203068|tubulin, beta	CR595719|TUBB|203068|tubulin, beta	CR596510|TUBB|203068|tubulin, beta	CR599668|TUBB|203068|tubulin, beta	CR602712|TUBB|203068|tubulin, beta	CR603644|TUBB|203068|tubulin, beta	CR610783|TUBB|203068|tubulin, beta	CR611055|TUBB|203068|tubulin, beta	CR613623|TUBB|203068|tubulin, beta	CR616054|TUBB|203068|tubulin, beta	CR616207|TUBB|203068|tubulin, beta	CR617649|TUBB|203068|tubulin, beta	CR617680|TUBB|203068|tubulin, beta	CR622219|TUBB|203068|tubulin, beta	BC070326|TUBB|203068|tubulin, beta
hg18_v1_chr3_+_190831909_190831998	0.722966	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr5_+_76418545_76418662	0.71986	SOX2.p2	CR597892|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr14_+_85066265_85066324	0.717734	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr4_+_40953698_40953761	0.716533	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623179|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598723|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609313|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610620|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR614782|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR616949|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623929|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR591761|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR619178|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610215|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR613951|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR596405|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598599|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR600224|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR624065|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR626014|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR595667|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609753|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610993|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr12_-_24606616_24606649	0.714038	SOX2.p2	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr18_-_29412148_29412306	0.712836	SOX2.p2	
hg18_v1_chr9_+_115678365_115678476	0.708027	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr4_-_74307637_74307650	0.706789	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr1_+_194887630_194887870	0.704492	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr3_-_71262405_71262422	0.70258	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr1_+_242283906_242283930	0.697435	SOX2.p2	
hg18_v1_chr17_-_1029758_1029880	0.695104	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg18_v1_chr2_-_37752731_37753056	0.690591	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr18_-_24010944_24011126	0.686255	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr17_+_71095733_71095807	0.683377	SOX2.p2	AF418286|MYO15B|80022|myosin XVB pseudogene	AF418287|MYO15B|80022|myosin XVB pseudogene	AF418288|MYO15B|80022|myosin XVB pseudogene	AF418289|MYO15B|80022|myosin XVB pseudogene	AF418290|MYO15B|80022|myosin XVB pseudogene	AF418291|MYO15B|80022|myosin XVB pseudogene
hg18_v1_chr1_-_152431175_152431232	0.68318	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr8_-_93176819_93176887	0.682178	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr19_+_10574055_10574212	0.68198	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr20_+_19818209_19818245	0.68169	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr3_-_71262426_71262435	0.681388	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chr3_+_29297806_29298130	0.6799	SOX2.p2	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chr22_-_17892859_17892893	0.676409	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5	CR626038|CLDN5|7122|claudin 5
hg18_v1_chr4_+_146623405_146623412	0.673516	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg18_v1_chr22_+_29420792_29420898	0.668726	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg18_v1_chrX_-_128616594_128616613	0.668704	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg18_v1_chr1_-_154318412_154318433	0.664415	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg18_v1_chr9_+_8848130_8848137	0.663502	SOX2.p2	
hg18_v1_chr4_-_138673014_138673070	0.657395	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg18_v1_chrX_+_135079461_135079461	0.654411	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr20_+_30061905_30061913	0.653033	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg18_v1_chr10_-_64698831_64699011	0.652897	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg18_v1_chr2_-_192420168_192420265	0.65289	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr2_+_108751033_108751198	0.650081	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr10_+_123913094_123913348	0.648181	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chrX_+_80344215_80344251	0.640558	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR590536|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR599935|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR591928|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr19_-_14121728_14121872	0.634898	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg18_v1_chr5_-_39460787_39460855	0.63195	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr12_-_107745455_107745455	0.627442	SOX2.p2	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chrX_+_135079120_135079120	0.627349	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg18_v1_chrX_-_19727775_19727818	0.627201	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr4_+_40953666_40953685	0.625991	SOX2.p2	CR605906|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr4_+_141397889_141397889	0.625079	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg18_v1_chr15_-_81667169_81667668	0.624968	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr7_-_86526880_86526949	0.623311	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr1_-_199259133_199259221	0.62302	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg18_v1_chr7_+_149707338_149707382	0.621081	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg18_v1_chrX_+_77889861_77889868	0.620922	SOX2.p2	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4	AK314134|LPAR4|2846|lysophosphatidic acid receptor 4
hg18_v1_chr7_-_5533621_5533848	0.61918	SOX2.p2	CR604039|ACTB|60|actin, beta	CR614609|ACTB|60|actin, beta	CR593025|ACTB|60|actin, beta	CR617617|ACTB|60|actin, beta	BC009636|ACTB|60|actin, beta
hg18_v1_chr6_-_56816403_56816460	0.618685	SOX2.p2	U31850|DST|667|dystonin
hg18_v1_chr1_+_161305558_161305898	0.613745	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr7_-_13997574_13997574	0.611546	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg18_v1_chr10_-_14686243_14686404	0.610673	SOX2.p2	CR610285|FAM107B|83641|family with sequence similarity 107, member B	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr11_-_118739838_118740067	0.60579	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr5_-_141318810_141318810	0.605244	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr18_+_29412538_29412576	0.603937	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg18_v1_chr12_-_41164010_41164041	0.600076	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr5_-_39461054_39461095	0.595483	SOX2.p2	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr4_+_40953652_40953654	0.595055	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr7_+_150321771_150321824	0.594647	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr11_-_118740069_118740116	0.592836	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr12_-_41164052_41164081	0.592464	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr19_+_44595589_44595589	0.588752	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg18_v1_chr4_-_91979113_91979291	0.585412	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr18_-_51406841_51406859	0.583889	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr4_+_151218862_151219088	0.583885	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg18_v1_chr7_+_106293112_106293218	0.583626	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr1_+_99884018_99884485	0.582589	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr3_-_69254226_69254435	0.582014	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg18_v1_chr2_-_160180197_160180323	0.581249	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chrX_+_99786044_99786058	0.580917	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr4_-_152368492_152368631	0.575733	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr6_+_30796123_30796283	0.575713	SOX2.p2	CR611118|TUBB|203068|tubulin, beta	CR619520|TUBB|203068|tubulin, beta	CR598285|TUBB|203068|tubulin, beta	CR600934|TUBB|203068|tubulin, beta	CR601607|TUBB|203068|tubulin, beta	CR604162|TUBB|203068|tubulin, beta	CR607031|TUBB|203068|tubulin, beta	CR611872|TUBB|203068|tubulin, beta	CR612751|TUBB|203068|tubulin, beta	CR613221|TUBB|203068|tubulin, beta	BC002347|TUBB|203068|tubulin, beta	BC007605|TUBB|203068|tubulin, beta	CR592478|TUBB|203068|tubulin, beta	CR596484|TUBB|203068|tubulin, beta	CR601013|TUBB|203068|tubulin, beta	CR604556|TUBB|203068|tubulin, beta	CR604712|TUBB|203068|tubulin, beta	CR605680|TUBB|203068|tubulin, beta	CR608598|TUBB|203068|tubulin, beta	CR608834|TUBB|203068|tubulin, beta	CR613167|TUBB|203068|tubulin, beta	CR615486|TUBB|203068|tubulin, beta	CR617111|TUBB|203068|tubulin, beta	CR621812|TUBB|203068|tubulin, beta	CR626833|TUBB|203068|tubulin, beta	CR603160|TUBB|203068|tubulin, beta	CR607608|TUBB|203068|tubulin, beta	CR620946|TUBB|203068|tubulin, beta	AB062393|TUBB|203068|tubulin, beta	CR604797|TUBB|203068|tubulin, beta	CR608670|TUBB|203068|tubulin, beta	CR610589|TUBB|203068|tubulin, beta	CR612988|TUBB|203068|tubulin, beta	CR615095|TUBB|203068|tubulin, beta	CR616894|TUBB|203068|tubulin, beta	CR617779|TUBB|203068|tubulin, beta	CR623850|TUBB|203068|tubulin, beta	BC001938|TUBB|203068|tubulin, beta	BC005838|TUBB|203068|tubulin, beta	CR594368|TUBB|203068|tubulin, beta	CR595266|TUBB|203068|tubulin, beta	CR595417|TUBB|203068|tubulin, beta	CR599452|TUBB|203068|tubulin, beta	CR601344|TUBB|203068|tubulin, beta	CR602045|TUBB|203068|tubulin, beta	CR619202|TUBB|203068|tubulin, beta	CR620593|TUBB|203068|tubulin, beta	CR620764|TUBB|203068|tubulin, beta	CR591865|TUBB|203068|tubulin, beta	CR620650|TUBB|203068|tubulin, beta	CR625193|TUBB|203068|tubulin, beta	CR605815|TUBB|203068|tubulin, beta	AF070561|TUBB|203068|tubulin, beta	AF070593|TUBB|203068|tubulin, beta	BC013374|TUBB|203068|tubulin, beta	NM_178014|TUBB|203068|tubulin, beta	BC021909|TUBB|203068|tubulin, beta	BC019924|TUBB|203068|tubulin, beta	BC062532|TUBB|203068|tubulin, beta	CR591614|TUBB|203068|tubulin, beta	CR601589|TUBB|203068|tubulin, beta	CR612875|TUBB|203068|tubulin, beta	CR618338|TUBB|203068|tubulin, beta	CR626769|TUBB|203068|tubulin, beta	CR592844|TUBB|203068|tubulin, beta	CR593906|TUBB|203068|tubulin, beta	CR604912|TUBB|203068|tubulin, beta	CR611048|TUBB|203068|tubulin, beta	CR594478|TUBB|203068|tubulin, beta	CR590449|TUBB|203068|tubulin, beta	CR615318|TUBB|203068|tubulin, beta	CR606296|TUBB|203068|tubulin, beta	CR613923|TUBB|203068|tubulin, beta	CR615817|TUBB|203068|tubulin, beta	CR605898|TUBB|203068|tubulin, beta	CR595241|TUBB|203068|tubulin, beta	CR611874|TUBB|203068|tubulin, beta	CR624717|TUBB|203068|tubulin, beta	CR613213|TUBB|203068|tubulin, beta	AK297489|TUBB|203068|tubulin, beta	CR600973|TUBB|203068|tubulin, beta	DQ891742|TUBB|203068|tubulin, beta	DQ891828|TUBB|203068|tubulin, beta	DQ894920|TUBB|203068|tubulin, beta	CR596111|TUBB|203068|tubulin, beta	V00599|TUBB|203068|tubulin, beta
hg18_v1_chr10_-_92670764_92670828	0.575152	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr3_+_188131209_188131334	0.574817	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr4_-_123761615_123761661	0.571925	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg18_v1_chr2_-_183095308_183095751	0.570382	SOX2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr4_+_3264509_3264607	0.569527	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chrX_-_47815944_47815944	0.567842	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chr9_+_138341752_138341823	0.567697	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg18_v1_chr9_-_129557373_129557403	0.56722	SOX2.p2	AK291393|SH2D3C|10044|SH2 domain containing 3C	NM_001142534|SH2D3C|10044|SH2 domain containing 3C	AK056068|SH2D3C|10044|SH2 domain containing 3C	NM_001142533|SH2D3C|10044|SH2 domain containing 3C
hg18_v1_chr8_-_38444398_38444519	0.566313	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr6_+_30796121_30796122	0.565914	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chrX_-_19727828_19727839	0.562123	SOX2.p2	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr5_-_111782637_111782908	0.559842	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg18_v1_chr15_-_81667773_81667828	0.559341	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr7_+_28418668_28418668	0.556216	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr19_-_54557450_54557525	0.553858	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg18_v1_chr2_+_12775336_12775398	0.552917	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr11_-_85107569_85107858	0.548867	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr8_+_21980315_21980332	0.548326	SOX2.p2	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)
hg18_v1_chrX_-_50573759_50573943	0.546645	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg18_v1_chr7_-_13997389_13997398	0.543816	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg18_v1_chr18_-_51406359_51406477	0.543394	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg18_v1_chr5_+_61910318_61910473	0.5425	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg18_v1_chrX_-_80344096_80344096	0.542383	SOX2.p2	AK094058|HMGN5|79366|high-mobility group nucleosome binding domain 5	NM_030763|HMGN5|79366|high-mobility group nucleosome binding domain 5
hg18_v1_chr6_-_111995213_111995213	0.542181	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg18_v1_chr11_-_27679617_27679755	0.540077	SOX2.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr21_-_27261276_27261344	0.538934	SOX2.p2	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg18_v1_chr1_+_201363458_201363483	0.538525	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg18_v1_chr21_+_25856311_25856375	0.536686	SOX2.p2	AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)
hg18_v1_chrX_+_99785818_99785959	0.53614	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr11_+_112337491_112337543	0.536072	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1	EU832805|NCAM1|4684|neural cell adhesion molecule 1	GQ129418|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr17_-_44037332_44037355	0.535647	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr1_+_85819004_85819256	0.533905	SOX2.p2	CR622169|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR593662|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR597890|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623495|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623693|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR603266|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR595937|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg18_v1_chr5_+_162862808_162862925	0.533303	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	CR622441|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta	CR596069|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr15_+_45797977_45797977	0.532577	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg18_v1_chr1_-_153107084_153107166	0.530985	SOX2.p2	
hg18_v1_chr3_+_179736917_179736917	0.530931	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr8_+_79591074_79591204	0.530525	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr5_-_39400319_39400411	0.530277	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg18_v1_chr12_-_31635089_31635281	0.529756	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr3_-_14964861_14964934	0.528743	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr3_+_156280129_156280157	0.528141	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr8_+_81560971_81561107	0.527626	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg18_v1_chr3_-_50335113_50335284	0.524406	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	CR595904|HYAL2|8692|hyaluronoglucosaminidase 2	CR597868|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg18_v1_chr10_+_133850325_133850534	0.518985	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg18_v1_chrX_+_55951280_55951389	0.518293	SOX2.p2	
hg18_v1_chr5_+_90711887_90711949	0.517918	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr8_-_120033240_120033563	0.517465	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr4_-_111777651_111777678	0.516346	SOX2.p2	CR605855|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr1_-_241484963_241484995	0.516194	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr9_-_4289574_4289593	0.515955	SOX2.p2	DQ438882|GLIS3|169792|GLIS family zinc finger 3	DQ438887|GLIS3|169792|GLIS family zinc finger 3	DQ438892|GLIS3|169792|GLIS family zinc finger 3	DQ438899|GLIS3|169792|GLIS family zinc finger 3	DQ438902|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chrX_+_84385649_84385658	0.515227	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg18_v1_chr2_-_218551786_218551796	0.514627	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg18_v1_chr11_+_5667392_5667453	0.512911	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr8_-_110415448_110415646	0.509644	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr10_+_17311282_17311282	0.508713	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg18_v1_chr10_-_116434364_116434403	0.507777	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg18_v1_chr2_+_189547377_189547460	0.507744	SOX2.p2	X07240|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr16_+_30314276_30314347	0.507335	SOX2.p2	
hg18_v1_chr5_+_34723420_34723420	0.505485	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg18_v1_chr15_+_65217412_65217412	0.50522	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg18_v1_chr1_+_33494745_33494760	0.504779	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr15_-_43280664_43280664	0.503389	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr3_+_156280338_156280398	0.502503	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chrX_-_135790509_135790529	0.501317	SOX2.p2	CR597391|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr3_+_20056527_20056527	0.498706	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr5_-_33927724_33927880	0.496913	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr19_-_1518875_1519056	0.496264	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg18_v1_chr10_+_17311242_17311281	0.492025	SOX2.p2	CR593122|VIM|7431|vimentin	CR593139|VIM|7431|vimentin	CR593157|VIM|7431|vimentin	CR595631|VIM|7431|vimentin	CR596714|VIM|7431|vimentin	CR597938|VIM|7431|vimentin	CR599707|VIM|7431|vimentin	CR601844|VIM|7431|vimentin	CR602002|VIM|7431|vimentin	CR602499|VIM|7431|vimentin	CR602711|VIM|7431|vimentin	CR604958|VIM|7431|vimentin	CR605908|VIM|7431|vimentin	CR608479|VIM|7431|vimentin	CR610054|VIM|7431|vimentin	CR611833|VIM|7431|vimentin	CR615569|VIM|7431|vimentin	CR617011|VIM|7431|vimentin	CR617845|VIM|7431|vimentin	CR618852|VIM|7431|vimentin	CR620637|VIM|7431|vimentin	CR620780|VIM|7431|vimentin	CR621379|VIM|7431|vimentin	CR624853|VIM|7431|vimentin	CR593764|VIM|7431|vimentin	CR595804|VIM|7431|vimentin	CR604328|VIM|7431|vimentin	CR604633|VIM|7431|vimentin	CR609435|VIM|7431|vimentin
hg18_v1_chr16_-_71639670_71639774	0.491051	SOX2.p2	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chr4_+_87070449_87070449	0.490378	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr3_-_170347019_170347093	0.489722	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr8_+_70567634_70567652	0.488677	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg18_v1_chr10_+_97793054_97793689	0.488223	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr10_+_17311307_17311331	0.484188	SOX2.p2	CR599648|VIM|7431|vimentin	CR616791|VIM|7431|vimentin	CR618218|VIM|7431|vimentin	CR623356|VIM|7431|vimentin	CR607117|VIM|7431|vimentin	Z19554|VIM|7431|vimentin	CR596331|VIM|7431|vimentin	CR621990|VIM|7431|vimentin	CR617642|VIM|7431|vimentin	CR597703|VIM|7431|vimentin	CR620841|VIM|7431|vimentin	CR617507|VIM|7431|vimentin
hg18_v1_chr5_-_33928049_33928055	0.48403	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr5_-_88235624_88235677	0.481918	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr10_+_17311283_17311303	0.480863	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	CR614482|VIM|7431|vimentin	CR622549|VIM|7431|vimentin	CR612980|VIM|7431|vimentin	CR590855|VIM|7431|vimentin	CR600582|VIM|7431|vimentin	CR600607|VIM|7431|vimentin	CR621958|VIM|7431|vimentin	CR622001|VIM|7431|vimentin	CR623317|VIM|7431|vimentin	CR591166|VIM|7431|vimentin	CR596422|VIM|7431|vimentin	CR601396|VIM|7431|vimentin	CR606048|VIM|7431|vimentin	CR608699|VIM|7431|vimentin	CR619643|VIM|7431|vimentin	CR622265|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	CR598442|VIM|7431|vimentin	CR620869|VIM|7431|vimentin	CR616523|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg18_v1_chr5_+_98132898_98132985	0.480755	SOX2.p2	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr19_-_55008172_55008419	0.480681	SOX2.p2	CR592794|FUZ|80199|fuzzy homolog (Drosophila)	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	CR609003|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	CR613541|FUZ|80199|fuzzy homolog (Drosophila)	CR616619|FUZ|80199|fuzzy homolog (Drosophila)	CR621655|FUZ|80199|fuzzy homolog (Drosophila)	CR595499|FUZ|80199|fuzzy homolog (Drosophila)	CR607071|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg18_v1_chr7_+_44754978_44755054	0.479439	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr19_+_39402167_39402274	0.478946	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr4_-_111777956_111777956	0.477675	SOX2.p2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2	U69961|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr10_+_94584449_94584449	0.474498	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr5_-_178977441_178977522	0.473983	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr19_+_1199548_1199600	0.47346	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg18_v1_chr5_+_40877053_40877346	0.473434	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg18_v1_chr3_-_158703821_158703829	0.471438	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr11_+_112337411_112337422	0.471103	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chrX_+_80343958_80344160	0.470742	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR615275|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg18_v1_chr8_-_18710575_18710684	0.469075	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr3_+_134239906_134239942	0.467745	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg18_v1_chr9_-_8723893_8723945	0.467723	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr1_+_161305188_161305387	0.466336	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr3_-_121652183_121652872	0.465917	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg18_v1_chr11_+_22316242_22316242	0.465533	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr4_+_160408447_160408447	0.465128	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chr11_-_88864061_88864380	0.464112	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg18_v1_chr13_-_20533703_20533729	0.463963	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr5_-_158459276_158459365	0.463169	SOX2.p2	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr5_-_176833197_176833256	0.460486	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr12_-_9804682_9804763	0.45958	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr15_-_43458247_43458271	0.458729	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chrX_-_135790595_135790608	0.453104	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr19_-_11166186_11166265	0.452538	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg18_v1_chr3_-_15348811_15349080	0.45223	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr2_-_189752575_189752849	0.451923	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr12_+_6915698_6915737	0.451291	SOX2.p2	
hg18_v1_chr16_+_28993770_28993843	0.450621	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg18_v1_chr13_+_23742846_23742950	0.450117	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr7_-_112515035_112515051	0.448332	SOX2.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr4_-_140696740_140697026	0.446635	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr4_+_134292630_134292837	0.444255	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	CR625417|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg18_v1_chr6_+_135544138_135544145	0.443781	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr15_+_61122957_61123066	0.443426	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg18_v1_chr10_-_14686413_14686457	0.442517	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chrX_-_31436335_31436335	0.442275	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr13_-_74799898_74799949	0.440735	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr8_-_38444675_38444848	0.439655	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr5_-_36337756_36337767	0.439347	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr15_+_94670160_94670170	0.439251	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr6_-_130072971_130073068	0.439084	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg18_v1_chr7_+_93862137_93862278	0.43851	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr17_-_44058612_44058963	0.437615	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg18_v1_chrX_-_135790535_135790588	0.435372	SOX2.p2	CR607658|RBMX|27316|RNA binding motif protein, X-linked	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	CR616933|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked	CR599705|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr5_+_102229425_102229434	0.434633	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg18_v1_chr1_-_206125877_206126015	0.434223	SOX2.p2	
hg18_v1_chr5_-_140680470_140680517	0.432797	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr3_-_101077605_101077757	0.431488	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr9_-_4289915_4290011	0.431234	SOX2.p2	DQ438877|GLIS3|169792|GLIS family zinc finger 3	DQ438881|GLIS3|169792|GLIS family zinc finger 3	DQ438886|GLIS3|169792|GLIS family zinc finger 3	DQ438891|GLIS3|169792|GLIS family zinc finger 3	DQ438898|GLIS3|169792|GLIS family zinc finger 3	DQ438901|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr11_-_123030091_123030351	0.428303	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chr9_-_35640852_35640946	0.427272	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr2_-_133145539_133145621	0.427239	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr7_-_112515068_112515084	0.423969	SOX2.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr1_-_224993498_224993625	0.423453	SOX2.p2	BC015009|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B
hg18_v1_chr5_-_140680523_140680549	0.422894	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr3_+_145174856_145174958	0.418694	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg18_v1_chr2_-_197883739_197883789	0.418366	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg18_v1_chr4_+_102954005_102954058	0.418276	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg18_v1_chr13_-_20533629_20533702	0.417816	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr14_+_105012106_105012244	0.417568	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	CR612651|CRIP2|1397|cysteine-rich protein 2	CR621315|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	CR602967|CRIP2|1397|cysteine-rich protein 2	CR610735|CRIP2|1397|cysteine-rich protein 2	CR616587|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	CR617600|CRIP2|1397|cysteine-rich protein 2	CR624241|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg18_v1_chr6_+_135544214_135544344	0.415689	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr15_+_82945223_82945347	0.414646	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr7_-_106088565_106088914	0.41401	SOX2.p2	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr1_+_149299530_149299554	0.413998	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604855|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR612384|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608900|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR614314|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chrX_+_51944658_51944776	0.413286	SOX2.p2	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg18_v1_chr2_+_237143118_237143220	0.413141	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7	CR616388|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg18_v1_chr4_+_2790338_2790338	0.412485	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr3_-_158704056_158704108	0.412115	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr12_-_11041740_11041740	0.410524	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr3_-_13032130_13032306	0.410319	SOX2.p2	
hg18_v1_chr2_-_188127430_188127463	0.410249	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg18_v1_chr2_+_54537842_54537901	0.408732	SOX2.p2	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr3_+_134239860_134239894	0.408546	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg18_v1_chr12_+_14429499_14429579	0.406865	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr1_+_219119623_219119822	0.405793	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg18_v1_chr10_+_11247467_11247530	0.405479	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr12_-_7739591_7739655	0.405414	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr1_-_171286634_171286725	0.404285	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg18_v1_chr8_+_70567581_70567605	0.403843	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr4_+_146622154_146622511	0.402104	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg18_v1_chr1_+_149299307_149299485	0.401538	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR599332|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr9_+_115382760_115382760	0.399939	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr12_-_15005761_15005869	0.399526	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr5_-_76418661_76418937	0.395243	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg18_v1_chrX_+_103243762_103243918	0.394979	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg18_v1_chr15_+_54998264_54998321	0.393091	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg18_v1_chr20_-_20641122_20641334	0.392023	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg18_v1_chr18_+_30327341_30327382	0.390643	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr1_+_78888064_78888120	0.389501	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr2_+_12775814_12775883	0.389339	SOX2.p2	
hg18_v1_chrX_+_100220491_100220527	0.389203	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg18_v1_chr5_-_111121150_111121364	0.38879	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr1_+_149299504_149299524	0.387385	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR602062|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR603022|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604725|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608615|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR593527|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr13_-_38510183_38510220	0.386388	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr13_-_71338144_71338376	0.385625	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr1_+_109827975_109828164	0.385564	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg18_v1_chr13_-_38510246_38510261	0.385403	SOX2.p2	NM_025138|C13orf23|80209|chromosome 13 open reading frame 23	NM_170719|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr1_+_100590595_100590615	0.382582	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr4_+_41235077_41235091	0.379464	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr2_-_225519974_225520022	0.379253	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr5_+_72148173_72148320	0.378254	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr8_-_93144366_93144366	0.378202	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr5_+_140166842_140166956	0.377738	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4
hg18_v1_chr9_+_115382990_115383028	0.376819	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr10_-_13789628_13789762	0.376615	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr11_+_117983515_117983660	0.37627	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg18_v1_chr2_+_210152609_210152669	0.37566	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr6_-_166960690_166960726	0.374731	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr13_-_28190961_28191149	0.374127	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chr1_+_100590619_100590638	0.373436	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr9_-_71476917_71477131	0.373279	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg18_v1_chr1_+_100590640_100590743	0.372919	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr8_+_110415725_110415813	0.372912	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr5_-_137502975_137503030	0.372248	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr10_+_11247419_11247444	0.372079	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr6_-_112682573_112682604	0.370098	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg18_v1_chr15_-_43267139_43267327	0.369354	SOX2.p2	CR607464|SHF|90525|Src homology 2 domain containing F	CR626127|SHF|90525|Src homology 2 domain containing F	CR610652|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr7_+_18501876_18501973	0.369345	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg18_v1_chr10_+_11247449_11247455	0.369281	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr11_-_71458739_71458785	0.368282	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr3_+_135996990_135996992	0.366733	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg18_v1_chr4_+_159909658_159909813	0.366702	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr10_+_49184658_49184926	0.366264	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr13_-_109757442_109757578	0.366102	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr16_+_2023279_2023297	0.365575	SOX2.p2	CR617760|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg18_v1_chr14_-_104602809_104602828	0.364702	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr6_-_133076873_133076889	0.36464	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr12_+_12829807_12829881	0.363608	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr11_-_85115105_85115158	0.363461	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr2_-_86418143_86418346	0.362807	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg18_v1_chr7_-_13995811_13995848	0.361353	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg18_v1_chr12_+_51730101_51730233	0.360511	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr10_+_11247059_11247146	0.35991	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr8_+_39890484_39890598	0.359725	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR614485|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR613807|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR616634|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR621546|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR591703|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg18_v1_chr6_+_135544170_135544207	0.359263	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr5_+_126140718_126140743	0.358883	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr11_+_112337299_112337384	0.358069	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr3_+_188130967_188131040	0.357964	SOX2.p2	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr20_-_17459973_17460012	0.357583	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg18_v1_chr5_-_150306298_150306335	0.357231	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg18_v1_chr1_-_50661716_50661729	0.356975	SOX2.p2	NM_032110|DMRTA2|63950|DMRT-like family A2
hg18_v1_chrX_-_100759562_100759646	0.35623	SOX2.p2	CR599653|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR624030|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR598648|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR614615|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR591698|ARMCX6|54470|armadillo repeat containing, X-linked 6	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg18_v1_chr6_+_89847019_89847181	0.353067	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr5_+_126140746_126140817	0.351691	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	CR609276|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg18_v1_chr2_-_136590210_136590327	0.350488	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg18_v1_chr7_-_47588266_47588350	0.350447	SOX2.p2	AK092864|TNS3|64759|tensin 3
hg18_v1_chr15_+_65145248_65145663	0.350028	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg18_v1_chr8_-_93177057_93177057	0.349823	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr17_+_75366524_75366628	0.349157	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg18_v1_chr3_+_35696119_35696282	0.348749	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr5_-_121441910_121441958	0.348317	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr18_+_30327243_30327282	0.348303	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr6_-_90119068_90119156	0.347915	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr5_+_126140949_126141098	0.346696	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg18_v1_chr18_-_27594696_27594840	0.346268	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg18_v1_chr6_-_32299757_32299821	0.34372	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg18_v1_chr19_-_40939756_40939798	0.343055	SOX2.p2	CR603021|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR607202|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR618274|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg18_v1_chr1_-_199742871_199743009	0.342589	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr4_+_154397975_154398004	0.342521	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr7_-_47588652_47588771	0.342173	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg18_v1_chr5_+_140777454_140777610	0.342151	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg18_v1_chr3_+_153469421_153469444	0.3416	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr6_+_21701942_21702760	0.341185	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg18_v1_chr6_-_90119158_90119160	0.340483	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr7_+_28692122_28692294	0.340046	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr5_-_176833259_176833299	0.339226	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr4_+_2789686_2789737	0.338798	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr1_+_81544432_81544599	0.338718	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg18_v1_chr17_+_17339059_17339164	0.33821	SOX2.p2	
hg18_v1_chr8_-_42817604_42817632	0.338203	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg18_v1_chr12_-_47735373_47735373	0.337825	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr5_+_34692124_34692216	0.337279	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg18_v1_chr5_-_156935317_156935449	0.336709	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr11_+_65027721_65028452	0.335886	SOX2.p2	
hg18_v1_chr1_-_199742841_199742863	0.335451	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr7_-_99536214_99536321	0.334517	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr5_-_150501393_150501408	0.334302	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg18_v1_chr8_-_33544184_33544226	0.334126	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg18_v1_chr12_-_16649211_16649347	0.333621	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr1_+_149299490_149299497	0.33155	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chrX_+_133952633_133952722	0.331345	SOX2.p2	BC008642|LOC644538|644538|hypothetical protein LOC644538	NM_001163438|LOC644538|644538|hypothetical protein LOC644538
hg18_v1_chr19_+_18357966_18357999	0.330964	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chr10_+_170423_170423	0.330324	SOX2.p2	NM_001161482|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg18_v1_chr2_+_108571209_108571226	0.330099	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr17_-_60088459_60088600	0.328835	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr4_-_83569853_83570272	0.328433	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_-_175578156_175578415	0.328147	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1
hg18_v1_chr5_-_95184121_95184197	0.327887	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	CR618562|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)	CR611519|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr3_-_113841941_113841950	0.326986	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr5_+_176494690_176494747	0.325967	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr1_+_153302825_153302923	0.325918	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg18_v1_chr22_-_43272100_43272206	0.325419	SOX2.p2	CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr1_-_241485105_241485285	0.325397	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr17_+_78009895_78009968	0.323752	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor	CR611448|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr5_+_92944680_92944798	0.322685	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr7_-_92615593_92615620	0.322515	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr1_-_153109349_153109391	0.322215	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr3_+_66527586_66527713	0.321807	SOX2.p2	
hg18_v1_chr7_+_55400890_55401255	0.321591	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr5_-_146813343_146813573	0.321133	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr5_-_121441866_121441878	0.321081	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg18_v1_chr5_-_88215034_88215049	0.32102	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr16_-_76026431_76026511	0.320761	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chr7_-_36992221_36992270	0.318571	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	NM_130442|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr4_+_41234944_41234981	0.318001	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr1_-_200380321_200380473	0.317634	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr2_-_74634569_74634595	0.317005	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg18_v1_chr2_-_152299229_152299246	0.315894	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr12_-_52939636_52939640	0.315664	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chrX_-_39921525_39921525	0.315248	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg18_v1_chr12_-_52939584_52939599	0.314997	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chr10_-_725522_725861	0.314971	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg18_v1_chr1_-_241485298_241485330	0.314671	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr9_+_81377289_81377399	0.313575	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr8_+_79590890_79590890	0.312951	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr19_+_7486987_7487103	0.31204	SOX2.p2	NM_018083|ZNF358|140467|zinc finger protein 358	CR623119|ZNF358|140467|zinc finger protein 358
hg18_v1_chr9_+_115396020_115396377	0.311769	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3	CR618862|RGS3|5998|regulator of G-protein signaling 3	BC018072|RGS3|5998|regulator of G-protein signaling 3	CR616828|RGS3|5998|regulator of G-protein signaling 3	CR605994|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr1_-_3437834_3437871	0.311753	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg18_v1_chr4_-_165523856_165523856	0.311359	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr2_-_1727220_1727239	0.310239	SOX2.p2	BC098579|PXDN|7837|peroxidasin homolog (Drosophila)
hg18_v1_chr19_-_17236522_17236572	0.309759	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	CR599813|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg18_v1_chr17_+_72376022_72376500	0.309264	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg18_v1_chr17_-_10265991_10265991	0.308224	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr1_-_158161898_158161900	0.306419	SOX2.p2	CR623657|TAGLN2|8407|transgelin 2	CR609777|TAGLN2|8407|transgelin 2	CR621369|TAGLN2|8407|transgelin 2
hg18_v1_chr5_-_121441805_121441860	0.306334	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg18_v1_chr10_+_11247243_11247259	0.30622	SOX2.p2	AK316354|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr2_+_108571177_108571199	0.305978	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr1_-_68470585_68470905	0.304656	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	CR624611|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg18_v1_chr1_-_16033866_16033977	0.304249	SOX2.p2	
hg18_v1_chr1_+_11461764_11461881	0.304179	SOX2.p2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg18_v1_chr17_+_78009819_78009890	0.303503	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	CR598397|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	CR590238|NARF|26502|nuclear prelamin A recognition factor	CR606462|NARF|26502|nuclear prelamin A recognition factor	CR595982|NARF|26502|nuclear prelamin A recognition factor	CR620704|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor	CR603660|NARF|26502|nuclear prelamin A recognition factor	CR597828|NARF|26502|nuclear prelamin A recognition factor	CR612983|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr22_-_37480898_37480961	0.303189	SOX2.p2	AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2	AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr3_+_110338250_110338256	0.303091	SOX2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr11_-_71429747_71429836	0.301823	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr15_+_74416129_74416154	0.30098	SOX2.p2	CR610026|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr3_-_113842350_113842363	0.300889	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr7_+_143043871_143043895	0.30051	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg18_v1_chr1_+_89871281_89871424	0.300355	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr17_+_28279040_28279228	0.299931	SOX2.p2	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr17_-_26672757_26672892	0.299746	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	CR590095|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg18_v1_chr17_+_55854636_55854687	0.299414	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg18_v1_chr5_-_156935283_156935306	0.298916	SOX2.p2	
hg18_v1_chr13_+_57103789_57103789	0.298825	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr2_-_63518589_63518644	0.298774	SOX2.p2	BC093752|WDPCP|51057|WD repeat containing planar cell polarity effector	BC093754|WDPCP|51057|WD repeat containing planar cell polarity effector	BC143426|WDPCP|51057|WD repeat containing planar cell polarity effector	NM_001042692|WDPCP|51057|WD repeat containing planar cell polarity effector	AF131737|WDPCP|51057|WD repeat containing planar cell polarity effector
hg18_v1_chr1_-_23730298_23730299	0.298641	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr4_-_152366970_152367109	0.298559	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr1_-_11674264_11674293	0.298457	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg18_v1_chr1_+_219119430_219119467	0.298086	SOX2.p2	CR591992|HLX|3142|H2.0-like homeobox
hg18_v1_chr5_+_88221013_88221028	0.297878	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg18_v1_chr6_-_46401363_46401489	0.297581	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2	NM_005822|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr9_+_5500544_5500783	0.297413	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr17_+_58625086_58625100	0.296578	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr14_-_20340830_20340875	0.296419	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr15_+_54998144_54998177	0.296346	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg18_v1_chr1_-_158161877_158161896	0.296346	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2	CR607405|TAGLN2|8407|transgelin 2	CR609407|TAGLN2|8407|transgelin 2	CR612553|TAGLN2|8407|transgelin 2	CR624984|TAGLN2|8407|transgelin 2	CR592851|TAGLN2|8407|transgelin 2	CR622397|TAGLN2|8407|transgelin 2	CR626596|TAGLN2|8407|transgelin 2
hg18_v1_chr3_+_173043832_173043852	0.296216	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg18_v1_chr20_+_41976831_41976971	0.296157	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg18_v1_chr17_-_40655347_40655423	0.29567	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr1_+_45565126_45565252	0.295285	SOX2.p2	CR620904|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR622386|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR602636|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR597681|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg18_v1_chr10_-_98315090_98315173	0.294855	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr7_-_13996166_13996166	0.294837	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg18_v1_chr17_-_16413188_16413254	0.294072	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg18_v1_chr7_+_149200937_149201013	0.293948	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg18_v1_chr2_+_33213111_33213308	0.29365	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chr1_+_157408000_157408179	0.293457	SOX2.p2	AK289541|CADM3|57863|cell adhesion molecule 3	NM_021189|CADM3|57863|cell adhesion molecule 3	AK308915|CADM3|57863|cell adhesion molecule 3	CR605082|CADM3|57863|cell adhesion molecule 3	NM_001127173|CADM3|57863|cell adhesion molecule 3	AF363367|CADM3|57863|cell adhesion molecule 3	AY358332|CADM3|57863|cell adhesion molecule 3	AF062733|CADM3|57863|cell adhesion molecule 3	BC033819|CADM3|57863|cell adhesion molecule 3	AY046418|CADM3|57863|cell adhesion molecule 3	AF529206|CADM3|57863|cell adhesion molecule 3	DQ890848|CADM3|57863|cell adhesion molecule 3	DQ894002|CADM3|57863|cell adhesion molecule 3
hg18_v1_chr15_+_74416156_74416278	0.293262	SOX2.p2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr9_+_81377419_81377592	0.29297	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr9_-_14388981_14388981	0.292884	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr1_+_89871212_89871230	0.292502	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr1_+_11674365_11674416	0.292009	SOX2.p2	BC111064|C1orf187|374946|chromosome 1 open reading frame 187	NM_198545|C1orf187|374946|chromosome 1 open reading frame 187	AK075558|C1orf187|374946|chromosome 1 open reading frame 187	AY358750|C1orf187|374946|chromosome 1 open reading frame 187
hg18_v1_chr9_+_71009746_71009897	0.291841	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr6_-_46401174_46401352	0.291772	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2	CR604948|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr8_-_70908130_70908178	0.291756	SOX2.p2	CR596526|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr11_+_125258718_125258718	0.291584	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg18_v1_chr17_+_28279283_28279349	0.291306	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	CR593283|TMEM98|26022|transmembrane protein 98	CR597085|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	CR596889|TMEM98|26022|transmembrane protein 98	CR613257|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	CR617431|TMEM98|26022|transmembrane protein 98	CR606539|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg18_v1_chr14_-_26136799_26136858	0.290936	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg18_v1_chr3_-_113842237_113842248	0.289865	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr12_-_3732478_3732580	0.289553	SOX2.p2	BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B	AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr1_+_89871231_89871236	0.289114	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr4_-_113777470_113777521	0.288628	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr19_+_43089720_43089785	0.288508	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg18_v1_chr14_-_88090641_88091251	0.288325	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr8_-_80842452_80842652	0.287949	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr19_-_46504831_46504973	0.287292	SOX2.p2	
hg18_v1_chr3_-_113841967_113841977	0.287274	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr9_+_36026900_36026994	0.285635	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr4_+_159909626_159909631	0.285598	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr9_+_132700462_132700515	0.285228	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr3_+_135996734_135996949	0.284754	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg18_v1_chr6_+_28200365_28200391	0.284645	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg18_v1_chr1_-_177106702_177106837	0.284504	SOX2.p2	AK223467|ANGPTL1|9068|angiopoietin-like 1	BC050640|ANGPTL1|9068|angiopoietin-like 1	AB056476|ANGPTL1|9068|angiopoietin-like 1	AY358278|ANGPTL1|9068|angiopoietin-like 1	NM_004673|ANGPTL1|9068|angiopoietin-like 1
hg18_v1_chr12_-_120502483_120502801	0.284056	SOX2.p2	AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B	NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B
hg18_v1_chr3_+_120496180_120496440	0.283988	SOX2.p2	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31	BC112163|ARHGAP31|57514|Rho GTPase activating protein 31	BC112165|ARHGAP31|57514|Rho GTPase activating protein 31
hg18_v1_chr14_-_104602784_104602803	0.283733	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr17_-_64649608_64649732	0.283515	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg18_v1_chr22_+_29333069_29333351	0.283426	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	CR604069|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II	CR590469|TCN2|6948|transcobalamin II
hg18_v1_chr3_-_153470022_153470049	0.283348	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr1_-_177378801_177378846	0.283296	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chrX_-_142550535_142550684	0.28314	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr2_+_108571336_108571466	0.283004	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr3_-_161766055_161766110	0.28282	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr10_+_102749222_102749254	0.281671	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr2_+_160180092_160180108	0.281617	SOX2.p2	CR604974|LOC643072|643072|hypothetical LOC643072
hg18_v1_chr6_-_33862690_33862696	0.28128	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg18_v1_chr3_-_48576204_48576225	0.280811	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg18_v1_chr5_-_98290117_98290139	0.27955	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr2_+_138438277_138438531	0.278896	SOX2.p2	NM_001024074|HNMT|3176|histamine N-methyltransferase	NM_001024075|HNMT|3176|histamine N-methyltransferase	NM_006895|HNMT|3176|histamine N-methyltransferase	AF523356|HNMT|3176|histamine N-methyltransferase	AF523357|HNMT|3176|histamine N-methyltransferase	AF523358|HNMT|3176|histamine N-methyltransferase	AF523359|HNMT|3176|histamine N-methyltransferase	AF523360|HNMT|3176|histamine N-methyltransferase	U08092|HNMT|3176|histamine N-methyltransferase	BC005907|HNMT|3176|histamine N-methyltransferase	AK301462|HNMT|3176|histamine N-methyltransferase	AK313804|HNMT|3176|histamine N-methyltransferase	BC020677|HNMT|3176|histamine N-methyltransferase	D16224|HNMT|3176|histamine N-methyltransferase	DQ891166|HNMT|3176|histamine N-methyltransferase	DQ894348|HNMT|3176|histamine N-methyltransferase
hg18_v1_chr7_+_50314801_50314998	0.278546	SOX2.p2	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg18_v1_chr20_-_55718351_55718439	0.278509	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr2_+_170298700_170298767	0.278471	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr9_+_132700567_132700651	0.277372	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr5_-_171643399_171643442	0.277315	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr4_-_141294682_141294883	0.27687	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg18_v1_chr10_+_53744043_53744200	0.276419	SOX2.p2	NM_012242|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AK314902|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR625465|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594616|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR601383|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603553|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	BC001539|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AY359005|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594190|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR595444|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603030|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR605923|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591735|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR600818|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR604811|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR610857|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF127563|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF177394|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591322|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)
hg18_v1_chr4_+_37655385_37655439	0.275789	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg18_v1_chr21_-_45118026_45118036	0.275668	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg18_v1_chr2_-_133144094_133144253	0.275512	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	CR601943|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr8_+_104452961_104453097	0.275478	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr11_-_101828563_101829084	0.275254	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr3_+_44665220_44665280	0.274362	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg18_v1_chr12_-_107551744_107551780	0.274254	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr7_-_92300573_92300833	0.273766	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr17_+_23722689_23722825	0.273697	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr11_-_76059435_76059480	0.273644	SOX2.p2	BC052210|LRRC32|2615|leucine rich repeat containing 32	BC070079|LRRC32|2615|leucine rich repeat containing 32	NM_001128922|LRRC32|2615|leucine rich repeat containing 32
hg18_v1_chr5_+_140703784_140703786	0.273378	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr2_-_207739815_207739925	0.273247	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr2_-_197165495_197165579	0.273137	SOX2.p2	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr12_-_107551783_107551800	0.273035	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr7_-_76667045_76667100	0.272657	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr2_-_30883775_30883820	0.272089	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg18_v1_chr1_-_200380477_200380489	0.272087	SOX2.p2	CR597275|ARL8A|127829|ADP-ribosylation factor-like 8A	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr1_+_219119468_219119607	0.271503	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg18_v1_chr17_+_72958920_72959049	0.270876	SOX2.p2	AK299828|SEPT9|10801|septin 9
hg18_v1_chr4_-_104240413_104240485	0.270034	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR601062|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR625169|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR599040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR605040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg18_v1_chr22_+_34107087_34107166	0.269828	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	CR611539|HMOX1|3162|heme oxygenase (decycling) 1	CR612068|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	CR617367|HMOX1|3162|heme oxygenase (decycling) 1	CR590034|HMOX1|3162|heme oxygenase (decycling) 1	CR595835|HMOX1|3162|heme oxygenase (decycling) 1	CR598003|HMOX1|3162|heme oxygenase (decycling) 1	CR600636|HMOX1|3162|heme oxygenase (decycling) 1	CR601640|HMOX1|3162|heme oxygenase (decycling) 1	CR605543|HMOX1|3162|heme oxygenase (decycling) 1	CR611293|HMOX1|3162|heme oxygenase (decycling) 1	CR612044|HMOX1|3162|heme oxygenase (decycling) 1	CR615878|HMOX1|3162|heme oxygenase (decycling) 1	CR615893|HMOX1|3162|heme oxygenase (decycling) 1	CR617513|HMOX1|3162|heme oxygenase (decycling) 1	CR622130|HMOX1|3162|heme oxygenase (decycling) 1	CR623799|HMOX1|3162|heme oxygenase (decycling) 1	CR625550|HMOX1|3162|heme oxygenase (decycling) 1	CR626132|HMOX1|3162|heme oxygenase (decycling) 1	CR592402|HMOX1|3162|heme oxygenase (decycling) 1	CR596243|HMOX1|3162|heme oxygenase (decycling) 1	CR615425|HMOX1|3162|heme oxygenase (decycling) 1	CR615434|HMOX1|3162|heme oxygenase (decycling) 1	CR623238|HMOX1|3162|heme oxygenase (decycling) 1	CR594865|HMOX1|3162|heme oxygenase (decycling) 1	CR624289|HMOX1|3162|heme oxygenase (decycling) 1	CR615696|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr4_+_3341521_3341521	0.269728	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr20_-_1420168_1420232	0.269623	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr8_-_38444982_38445229	0.268086	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr12_-_107551694_107551713	0.267497	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr1_+_154120170_154120225	0.26702	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr10_+_97505398_97505662	0.265862	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr3_-_113842255_113842279	0.265697	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr20_-_1420126_1420142	0.264803	SOX2.p2	AK297072|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr3_-_113842652_113842682	0.264799	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr14_-_22358752_22358853	0.264494	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR617040|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR605487|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR601579|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
hg18_v1_chr14_-_89155078_89155619	0.263458	SOX2.p2	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg18_v1_chr22_+_38903825_38904066	0.262147	SOX2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr18_+_18969724_18969724	0.261886	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg18_v1_chr7_+_104539548_104539681	0.2617	SOX2.p2	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)
hg18_v1_chr17_-_60088637_60088652	0.261524	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr10_+_35524835_35524959	0.260512	SOX2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr17_-_24163517_24163629	0.260482	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr6_+_144649142_144649204	0.260092	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr1_-_158161902_158161920	0.259671	SOX2.p2	CR604476|TAGLN2|8407|transgelin 2	CR608575|TAGLN2|8407|transgelin 2	CR610006|TAGLN2|8407|transgelin 2	CR613520|TAGLN2|8407|transgelin 2	BC002616|TAGLN2|8407|transgelin 2	CR592747|TAGLN2|8407|transgelin 2	CR607855|TAGLN2|8407|transgelin 2	CR608199|TAGLN2|8407|transgelin 2	CR608276|TAGLN2|8407|transgelin 2	CR609748|TAGLN2|8407|transgelin 2	CR613098|TAGLN2|8407|transgelin 2	CR618095|TAGLN2|8407|transgelin 2	CR620277|TAGLN2|8407|transgelin 2	CR599010|TAGLN2|8407|transgelin 2	CR620855|TAGLN2|8407|transgelin 2	CR624026|TAGLN2|8407|transgelin 2	CR618563|TAGLN2|8407|transgelin 2	CR602105|TAGLN2|8407|transgelin 2	CR614100|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	CR590142|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg18_v1_chr4_-_52578542_52578542	0.259494	SOX2.p2	CR749811|LRRC66|339977|leucine rich repeat containing 66	NM_001024611|LRRC66|339977|leucine rich repeat containing 66
hg18_v1_chr3_+_192529567_192530154	0.258449	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr9_-_87904844_87904965	0.258223	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr6_-_32271868_32271902	0.258191	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg18_v1_chr16_+_67017_67017	0.25799	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg18_v1_chr12_-_10479810_10479882	0.25764	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg18_v1_chr11_+_65026382_65026392	0.257425	SOX2.p2	
hg18_v1_chr19_+_56766342_56766376	0.257204	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg18_v1_chr12_-_38300109_38300109	0.257145	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr5_+_140767953_140767953	0.256643	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg18_v1_chr3_-_170346760_170346786	0.256244	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr17_+_44429748_44429911	0.2558	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg18_v1_chr7_-_15568099_15568164	0.2553	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg18_v1_chr5_-_175896829_175897037	0.255	SOX2.p2	AB029023|RNF44|22838|ring finger protein 44	BC039833|RNF44|22838|ring finger protein 44	BC063297|RNF44|22838|ring finger protein 44	NM_014901|RNF44|22838|ring finger protein 44
hg18_v1_chr15_+_61583826_61583845	0.254608	SOX2.p2	AK314223|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chrX_-_106846253_106846366	0.254556	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	CR600468|TSC22D3|1831|TSC22 domain family, member 3	CR622973|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chrX_-_153252775_153252844	0.254085	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg18_v1_chr22_+_17012841_17012964	0.253643	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr3_-_71715431_71715905	0.253443	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr2_+_15998090_15998188	0.253232	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg18_v1_chr20_-_39199936_39200109	0.252896	SOX2.p2	
hg18_v1_chr11_-_10787157_10787248	0.252842	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr15_-_75259714_75259853	0.252788	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr15_+_64372686_64372713	0.252575	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr5_-_110090264_110090348	0.252558	SOX2.p2	AK296542|TMEM232|642987|transmembrane protein 232	BC042563|TMEM232|642987|transmembrane protein 232	BX648527|TMEM232|642987|transmembrane protein 232	NM_001039763|TMEM232|642987|transmembrane protein 232
hg18_v1_chr5_+_76470829_76470856	0.251914	SOX2.p2	
hg18_v1_chr1_+_154318954_154319041	0.251402	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr6_-_131333173_131333315	0.251165	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr11_+_65164767_65164895	0.250897	SOX2.p2	AK310068|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr14_-_75517844_75517844	0.250408	SOX2.p2	NM_003239|TGFB3|7043|transforming growth factor, beta 3
hg18_v1_chr1_-_41259973_41260013	0.250214	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg18_v1_chr12_-_90097384_90097489	0.25	SOX2.p2	CR602747|DCN|1634|decorin	AK291309|DCN|1634|decorin	CR601529|DCN|1634|decorin	CR611956|DCN|1634|decorin	CR607208|DCN|1634|decorin	CR626398|DCN|1634|decorin	CR613049|DCN|1634|decorin	BX571756|DCN|1634|decorin	CR601956|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg18_v1_chr10_+_102749597_102749676	0.249936	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr6_+_30799130_30799944	0.249592	SOX2.p2	BC001896|TUBB|203068|tubulin, beta	CR623734|TUBB|203068|tubulin, beta	DQ457058|TUBB|203068|tubulin, beta	CR609320|TUBB|203068|tubulin, beta	BC029323|TUBB|203068|tubulin, beta	BC015889|TUBB|203068|tubulin, beta	CR603884|TUBB|203068|tubulin, beta	CR595288|TUBB|203068|tubulin, beta	CR621096|TUBB|203068|tubulin, beta	CR610916|TUBB|203068|tubulin, beta	CR598257|TUBB|203068|tubulin, beta	CR620192|TUBB|203068|tubulin, beta	CR601330|TUBB|203068|tubulin, beta	CR620319|TUBB|203068|tubulin, beta	CR620286|TUBB|203068|tubulin, beta	CR614676|TUBB|203068|tubulin, beta	CR617749|TUBB|203068|tubulin, beta	CR596743|TUBB|203068|tubulin, beta	BC001002|TUBB|203068|tubulin, beta	EF036509|TUBB|203068|tubulin, beta	CR606806|TUBB|203068|tubulin, beta	CR598437|TUBB|203068|tubulin, beta
hg18_v1_chr1_-_23758871_23758908	0.249397	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr11_+_65164963_65164995	0.248847	SOX2.p2	
hg18_v1_chr9_+_90193807_90193830	0.248802	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr1_+_9634368_9634415	0.248752	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg18_v1_chr1_-_206484258_206484287	0.248424	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr3_-_113842133_113842168	0.247895	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr6_-_90119169_90119300	0.247566	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr4_+_120167770_120167775	0.247396	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr13_+_23451919_23451948	0.246174	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr6_-_64087806_64087840	0.245346	SOX2.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg18_v1_chr4_+_55218663_55219119	0.245118	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg18_v1_chr5_+_139008052_139008065	0.245036	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr9_-_36266930_36267052	0.244956	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg18_v1_chr1_-_152445432_152445522	0.244448	SOX2.p2	NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189	BC127710|C1orf189|388701|chromosome 1 open reading frame 189	BC130509|C1orf189|388701|chromosome 1 open reading frame 189
hg18_v1_chr2_+_187163232_187163312	0.244302	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr4_-_7991992_7992584	0.242937	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg18_v1_chr12_+_79362256_79362256	0.242578	SOX2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chrX_-_100801472_100801518	0.242469	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg18_v1_chr11_-_60880799_60880936	0.241648	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr19_+_1220244_1220366	0.240697	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	CR613900|CIRBP|1153|cold inducible RNA binding protein	CR592824|CIRBP|1153|cold inducible RNA binding protein	CR606464|CIRBP|1153|cold inducible RNA binding protein	CR624441|CIRBP|1153|cold inducible RNA binding protein	CR593654|CIRBP|1153|cold inducible RNA binding protein	CR615208|CIRBP|1153|cold inducible RNA binding protein	CR612930|CIRBP|1153|cold inducible RNA binding protein	CR602241|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	CR613916|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	CR597422|CIRBP|1153|cold inducible RNA binding protein	CR601213|CIRBP|1153|cold inducible RNA binding protein	CR618838|CIRBP|1153|cold inducible RNA binding protein	CR625198|CIRBP|1153|cold inducible RNA binding protein	CR601118|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein	CR618584|CIRBP|1153|cold inducible RNA binding protein
hg18_v1_chr22_+_36422940_36422956	0.240368	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg18_v1_chr14_+_99329198_99329716	0.240304	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg18_v1_chr13_+_75108450_75108493	0.240038	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg18_v1_chr19_+_53664276_53664384	0.2397	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2	CR599552|CYTH2|9266|cytohesin 2
hg18_v1_chr2_-_39310176_39310240	0.239371	SOX2.p2	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4	AY847283|CDKL4|344387|cyclin-dependent kinase-like 4	NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4	BC144460|CDKL4|344387|cyclin-dependent kinase-like 4
hg18_v1_chrX_+_70419766_70419766	0.238889	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr1_-_240228987_240229007	0.238508	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chrX_-_2892288_2892493	0.238487	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg18_v1_chr16_+_57091546_57091653	0.23835	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	CR590492|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg18_v1_chr12_+_32151351_32151530	0.238279	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr6_+_89847183_89847332	0.238148	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr15_-_38188333_38188441	0.238141	SOX2.p2	BC060783|BMF|90427|Bcl2 modifying factor	BC070043|BMF|90427|Bcl2 modifying factor	NM_001003940|BMF|90427|Bcl2 modifying factor
hg18_v1_chr1_+_111215343_111215361	0.237155	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr10_-_61570665_61570779	0.236765	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr7_-_148212230_148212291	0.236124	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr7_-_37454933_37455054	0.235677	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr13_+_96592051_96592116	0.235627	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chr1_+_216585298_216585370	0.235538	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr7_-_112514990_112515019	0.23539	SOX2.p2	CR609708|GPR85|54329|G protein-coupled receptor 85	BC030577|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr14_-_34252695_34252784	0.23487	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr7_+_73341640_73341807	0.234532	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr8_+_9949207_9949371	0.234477	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg18_v1_chr1_-_199657468_199657496	0.234396	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr22_+_17012704_17012764	0.233761	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr2_+_12774264_12775144	0.232852	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr17_-_20886680_20887049	0.232778	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg18_v1_chr11_+_111666133_111666228	0.231961	SOX2.p2	
hg18_v1_chr6_-_50045296_50045296	0.23073	SOX2.p2	DQ012017|DEFB113|245927|defensin, beta 113	NM_001037729|DEFB113|245927|defensin, beta 113
hg18_v1_chr5_+_148711419_148711529	0.23069	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr2_+_36777336_36777365	0.230295	SOX2.p2	NM_001177969|VIT|5212|vitrin	NM_001177970|VIT|5212|vitrin	NM_001177971|VIT|5212|vitrin	NM_001177972|VIT|5212|vitrin	NM_053276|VIT|5212|vitrin	AK299426|VIT|5212|vitrin
hg18_v1_chr9_-_14769530_14769530	0.230287	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr12_+_54172413_54172413	0.22986	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr11_+_46358909_46359193	0.229776	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg18_v1_chr15_+_21361901_21362021	0.22964	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr19_+_60803412_60803563	0.229582	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg18_v1_chr6_+_10663934_10663934	0.229542	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr12_-_112394259_112394259	0.229215	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg18_v1_chr5_-_150517528_150517635	0.229121	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg18_v1_chr16_+_57055049_57055113	0.229094	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg18_v1_chr5_+_76418214_76418347	0.228865	SOX2.p2	AK311179|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr1_-_36589744_36589778	0.228603	SOX2.p2	
hg18_v1_chr4_+_71713324_71713324	0.228541	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg18_v1_chr13_+_48923688_48923775	0.22791	SOX2.p2	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg18_v1_chrX_+_11687655_11687681	0.227342	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr1_-_7923464_7923473	0.2272	SOX2.p2	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr1_+_165330710_165330710	0.227142	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg18_v1_chr11_+_112337199_112337216	0.22704	SOX2.p2	NM_000615|NCAM1|4684|neural cell adhesion molecule 1	NM_001076682|NCAM1|4684|neural cell adhesion molecule 1	NM_181351|NCAM1|4684|neural cell adhesion molecule 1	AK314589|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr12_-_10464308_10464460	0.226906	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg18_v1_chr17_+_59875623_59875900	0.226568	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr8_-_29262240_29262240	0.226058	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg18_v1_chr1_-_158161924_158161963	0.225616	SOX2.p2	CR621820|TAGLN2|8407|transgelin 2	CR601283|TAGLN2|8407|transgelin 2
hg18_v1_chr15_+_22751162_22751284	0.225159	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR591152|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR604539|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593721|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR594630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR595630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599234|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593346|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599902|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr4_+_176076083_176076133	0.225047	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chr16_+_57055129_57055149	0.22479	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg18_v1_chr14_-_57688669_57688685	0.224155	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr12_-_101398288_101398403	0.223991	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_-_161766005_161766023	0.223898	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr4_-_113656762_113656786	0.223602	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr22_+_34107051_34107086	0.223306	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	CR623301|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	CR603909|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr10_-_30356344_30356531	0.222758	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg18_v1_chr3_+_184836049_184836139	0.221889	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr12_+_94135645_94136005	0.221553	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr1_-_150353179_150353179	0.221395	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg18_v1_chr14_-_91483325_91483563	0.22117	SOX2.p2	AJ133490|FBLN5|10516|fibulin 5	CR457140|FBLN5|10516|fibulin 5	CR604352|FBLN5|10516|fibulin 5	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg18_v1_chr12_+_67919583_67919618	0.221017	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr17_+_70964258_70964408	0.220091	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg18_v1_chr8_-_17315171_17315230	0.22001	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr12_-_3732614_3732672	0.218819	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr12_-_6642513_6642621	0.218526	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	CR614525|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	CR596785|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	CR616048|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg18_v1_chrX_+_70420237_70420257	0.217997	SOX2.p2	CR605046|NONO|4841|non-POU domain containing, octamer-binding	CR614502|NONO|4841|non-POU domain containing, octamer-binding	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr15_+_61583846_61584015	0.217752	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr20_-_29751755_29751762	0.217483	SOX2.p2	
hg18_v1_chr3_-_15814678_15814694	0.216981	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr13_-_34948758_34948835	0.216875	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chr3_-_113842553_113842594	0.216508	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr2_-_98713862_98713994	0.216447	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr17_-_8139330_8139468	0.216438	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr5_-_16795336_16795338	0.215374	SOX2.p2	AK316138|MYO10|4651|myosin X
hg18_v1_chr7_-_66097838_66098033	0.214683	SOX2.p2	CR597378|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR606624|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622210|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601377|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR610261|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622442|SBDS|51119|Shwachman-Bodian-Diamond syndrome	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR591576|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR604577|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR612387|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601234|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR613995|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR596032|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR626007|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg18_v1_chr5_+_65053749_65053956	0.214241	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chrX_+_70420221_70420233	0.213689	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding	CR597886|NONO|4841|non-POU domain containing, octamer-binding	CR619917|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr1_-_40140126_40140273	0.213684	SOX2.p2	CR614411|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg18_v1_chr19_-_50688310_50688357	0.213647	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg18_v1_chr8_-_72436519_72436560	0.213601	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr9_-_85773899_85773933	0.213335	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr3_-_121065112_121065117	0.212932	SOX2.p2	
hg18_v1_chr1_+_151498802_151498802	0.212037	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr3_-_51976428_51976521	0.21193	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg18_v1_chr7_-_21951946_21952068	0.211559	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chrX_+_70438352_70438379	0.211523	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg18_v1_chr1_+_149395728_149395781	0.210954	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chr4_+_119174947_119175100	0.210887	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr12_+_111980044_111980102	0.21085	SOX2.p2	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr14_-_57688560_57688659	0.210823	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr11_+_65164167_65164167	0.210704	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr7_-_148212292_148212309	0.210427	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr1_-_199259447_199259462	0.210347	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr1_-_26105477_26105579	0.210256	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr6_+_27215039_27215066	0.210222	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	CR599017|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg18_v1_chr13_-_24395054_24395084	0.210086	SOX2.p2	NM_018451|CENPJ|55835|centromere protein J
hg18_v1_chr12_+_67919619_67919693	0.209971	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr10_+_11246934_11247016	0.209948	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr15_+_55298908_55299010	0.20989	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr10_+_86174665_86174686	0.209865	SOX2.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr9_-_122728993_122728993	0.208695	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr7_-_26198673_26198679	0.208249	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr1_+_24158887_24158897	0.208186	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr1_-_75854281_75854387	0.208119	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg18_v1_chr9_-_16717887_16717908	0.208034	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg18_v1_chrX_+_149902415_149902515	0.207134	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr10_+_115501202_115501202	0.207116	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr8_-_72437020_72437039	0.206905	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr10_+_35466715_35466769	0.206858	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr13_+_112704077_112704224	0.206397	SOX2.p2	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg18_v1_chr21_-_30836051_30836053	0.206337	SOX2.p2	AB096947|KRTAP19-6|337973|keratin associated protein 19-6	AB096948|KRTAP19-6|337973|keratin associated protein 19-6	NM_181612|KRTAP19-6|337973|keratin associated protein 19-6	BC101813|KRTAP19-6|337973|keratin associated protein 19-6	BC101815|KRTAP19-6|337973|keratin associated protein 19-6
hg18_v1_chr17_-_71017509_71017563	0.205791	SOX2.p2	AK300354|CASKIN2|57513|CASK interacting protein 2	NM_001142643|CASKIN2|57513|CASK interacting protein 2	AK315936|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr1_-_199742864_199742868	0.205728	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr17_-_10362583_10362583	0.205554	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr5_+_170221441_170221577	0.205331	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg18_v1_chr3_+_19164973_19165044	0.205277	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg18_v1_chr6_-_79732391_79732552	0.204985	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr8_+_136539290_136539476	0.204829	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr5_-_150517499_150517526	0.204426	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chr12_-_68379331_68379462	0.204364	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr20_-_1420004_1420067	0.203927	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr12_-_14858358_14858382	0.203833	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr6_-_117853710_117853738	0.203822	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr11_+_129496792_129496884	0.203591	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr12_+_48047428_48047895	0.202675	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr21_-_39642712_39642807	0.201711	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr14_+_54046295_54046427	0.201642	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	CR601996|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg18_v1_chr1_+_1062137_1062259	0.201402	SOX2.p2	BC028014|LOC254099|254099|hypothetical protein LOC254099
hg18_v1_chr2_-_213111525_213111596	0.200657	SOX2.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr9_-_139316523_139316559	0.200589	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr5_+_155686333_155686344	0.20051	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr4_+_95347773_95347895	0.200105	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg18_v1_chrX_+_70420194_70420219	0.200036	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr7_+_120416103_120416161	0.199989	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr21_+_29439768_29439794	0.199774	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg18_v1_chr11_+_14883118_14883133	0.19975	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg18_v1_chr8_+_77756077_77756089	0.199505	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg18_v1_chr17_+_3518834_3518864	0.198964	SOX2.p2	CR609408|TMEM93|83460|transmembrane protein 93	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg18_v1_chr4_+_156899575_156899733	0.198874	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr2_+_210152399_210152432	0.198856	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr11_-_101906640_101906699	0.198585	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg18_v1_chr17_-_24491521_24491554	0.198263	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg18_v1_chr5_+_140730014_140730145	0.19787	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg18_v1_chr1_+_50344550_50344550	0.197626	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr14_-_73250094_73250935	0.197526	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg18_v1_chr15_+_54998115_54998124	0.196741	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr12_-_21980894_21980894	0.196335	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020298|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg18_v1_chr7_+_26158257_26158660	0.196096	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chr17_-_53420595_53420639	0.195794	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr14_-_37795001_37795066	0.195725	SOX2.p2	CR594082|CLEC14A|161198|C-type lectin domain family 14, member A	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr1_+_203106600_203106612	0.195401	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg18_v1_chr3_-_161765860_161765913	0.19523	SOX2.p2	CR597383|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chrX_+_100764757_100764838	0.19517	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR616317|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR626124|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg18_v1_chr19_-_1603325_1603352	0.194163	SOX2.p2	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg18_v1_chr9_-_90983195_90983374	0.194051	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr8_+_26491507_26491687	0.193754	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr6_-_91063301_91063365	0.193288	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr17_+_71772875_71772884	0.193274	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr19_-_49131250_49131299	0.19236	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg18_v1_chr15_-_43457916_43458146	0.192145	SOX2.p2	S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr19_-_7896974_7897058	0.191935	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg18_v1_chr16_-_87535106_87535108	0.191699	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr13_+_97593711_97593728	0.191553	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr11_+_17289030_17289089	0.19139	SOX2.p2	
hg18_v1_chr9_+_35528628_35528628	0.191329	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr18_+_64616296_64616349	0.19117	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg18_v1_chr3_-_99236520_99236520	0.191114	SOX2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr11_-_66201794_66201881	0.191028	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	CR614869|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr9_-_122516399_122516678	0.190379	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg18_v1_chr12_-_25041639_25041719	0.190096	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr21_-_26029830_26029854	0.189713	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chr15_+_46285789_46285790	0.189331	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr9_+_133259330_133259444	0.189162	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr5_+_140719773_140719886	0.189109	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg18_v1_chr16_+_88517187_88517331	0.189002	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3	CR598025|TUBB3|10381|tubulin, beta 3	CR601978|TUBB3|10381|tubulin, beta 3	AK314616|TUBB3|10381|tubulin, beta 3	AK058140|TUBB3|10381|tubulin, beta 3	AK223039|TUBB3|10381|tubulin, beta 3	AK307201|TUBB3|10381|tubulin, beta 3	CR591503|TUBB3|10381|tubulin, beta 3	CR590075|TUBB3|10381|tubulin, beta 3	CR592610|TUBB3|10381|tubulin, beta 3	CR595964|TUBB3|10381|tubulin, beta 3	CR598043|TUBB3|10381|tubulin, beta 3	CR600906|TUBB3|10381|tubulin, beta 3	CR614385|TUBB3|10381|tubulin, beta 3	BC000748|TUBB3|10381|tubulin, beta 3	BC003021|TUBB3|10381|tubulin, beta 3	CR590351|TUBB3|10381|tubulin, beta 3	CR592791|TUBB3|10381|tubulin, beta 3	CR597505|TUBB3|10381|tubulin, beta 3	CR599272|TUBB3|10381|tubulin, beta 3	CR604020|TUBB3|10381|tubulin, beta 3	CR604723|TUBB3|10381|tubulin, beta 3	CR605372|TUBB3|10381|tubulin, beta 3	CR607915|TUBB3|10381|tubulin, beta 3	CR611692|TUBB3|10381|tubulin, beta 3	CR612113|TUBB3|10381|tubulin, beta 3	CR618719|TUBB3|10381|tubulin, beta 3	CR619366|TUBB3|10381|tubulin, beta 3	CR619439|TUBB3|10381|tubulin, beta 3	CR621602|TUBB3|10381|tubulin, beta 3	CR592245|TUBB3|10381|tubulin, beta 3	CR594431|TUBB3|10381|tubulin, beta 3	CR601082|TUBB3|10381|tubulin, beta 3	CR601754|TUBB3|10381|tubulin, beta 3	CR605618|TUBB3|10381|tubulin, beta 3	CR607807|TUBB3|10381|tubulin, beta 3	CR613956|TUBB3|10381|tubulin, beta 3	CR614638|TUBB3|10381|tubulin, beta 3	CR615850|TUBB3|10381|tubulin, beta 3	CR617597|TUBB3|10381|tubulin, beta 3	CR618148|TUBB3|10381|tubulin, beta 3	CR620404|TUBB3|10381|tubulin, beta 3	CR622595|TUBB3|10381|tubulin, beta 3	CR622839|TUBB3|10381|tubulin, beta 3	CR625315|TUBB3|10381|tubulin, beta 3	CR595448|TUBB3|10381|tubulin, beta 3	CR609285|TUBB3|10381|tubulin, beta 3	CR623719|TUBB3|10381|tubulin, beta 3	CR594636|TUBB3|10381|tubulin, beta 3	CR603943|TUBB3|10381|tubulin, beta 3	CR604865|TUBB3|10381|tubulin, beta 3	CR605315|TUBB3|10381|tubulin, beta 3	CR608519|TUBB3|10381|tubulin, beta 3	CR609873|TUBB3|10381|tubulin, beta 3	CR609931|TUBB3|10381|tubulin, beta 3	CR610428|TUBB3|10381|tubulin, beta 3	CR610920|TUBB3|10381|tubulin, beta 3	CR613333|TUBB3|10381|tubulin, beta 3	CR615967|TUBB3|10381|tubulin, beta 3	CR617704|TUBB3|10381|tubulin, beta 3	CR625137|TUBB3|10381|tubulin, beta 3	CR590783|TUBB3|10381|tubulin, beta 3	CR596446|TUBB3|10381|tubulin, beta 3	CR604211|TUBB3|10381|tubulin, beta 3	CR604583|TUBB3|10381|tubulin, beta 3	CR605022|TUBB3|10381|tubulin, beta 3	CR613212|TUBB3|10381|tubulin, beta 3	CR615484|TUBB3|10381|tubulin, beta 3	CR615487|TUBB3|10381|tubulin, beta 3	CR616697|TUBB3|10381|tubulin, beta 3	CR624252|TUBB3|10381|tubulin, beta 3	CR624879|TUBB3|10381|tubulin, beta 3	CR625914|TUBB3|10381|tubulin, beta 3	CR593464|TUBB3|10381|tubulin, beta 3	CR600381|TUBB3|10381|tubulin, beta 3	CR601914|TUBB3|10381|tubulin, beta 3	CR605928|TUBB3|10381|tubulin, beta 3	CR609561|TUBB3|10381|tubulin, beta 3	CR590708|TUBB3|10381|tubulin, beta 3	CR596505|TUBB3|10381|tubulin, beta 3	CR598551|TUBB3|10381|tubulin, beta 3	CR600096|TUBB3|10381|tubulin, beta 3	CR604086|TUBB3|10381|tubulin, beta 3	CR605687|TUBB3|10381|tubulin, beta 3	CR611346|TUBB3|10381|tubulin, beta 3	CR614854|TUBB3|10381|tubulin, beta 3	CR615754|TUBB3|10381|tubulin, beta 3	CR623384|TUBB3|10381|tubulin, beta 3	CR594063|TUBB3|10381|tubulin, beta 3	CR596211|TUBB3|10381|tubulin, beta 3	CR596786|TUBB3|10381|tubulin, beta 3	CR599992|TUBB3|10381|tubulin, beta 3	CR603504|TUBB3|10381|tubulin, beta 3	CR603509|TUBB3|10381|tubulin, beta 3	CR603741|TUBB3|10381|tubulin, beta 3	CR614150|TUBB3|10381|tubulin, beta 3	CR623445|TUBB3|10381|tubulin, beta 3	CR592535|TUBB3|10381|tubulin, beta 3	CR609278|TUBB3|10381|tubulin, beta 3	CR610945|TUBB3|10381|tubulin, beta 3	CR623379|TUBB3|10381|tubulin, beta 3	CR609372|TUBB3|10381|tubulin, beta 3	CR622759|TUBB3|10381|tubulin, beta 3	BC064975|TUBB3|10381|tubulin, beta 3	CR624149|TUBB3|10381|tubulin, beta 3	CR593269|TUBB3|10381|tubulin, beta 3	CR600094|TUBB3|10381|tubulin, beta 3	CR612703|TUBB3|10381|tubulin, beta 3	AF427491|TUBB3|10381|tubulin, beta 3	U47634|TUBB3|10381|tubulin, beta 3	S62643|TUBB3|10381|tubulin, beta 3
hg18_v1_chr5_+_139008091_139008137	0.188084	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr3_-_127303080_127303089	0.187557	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr5_-_171643247_171643372	0.186772	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr11_-_95715976_95716126	0.186672	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr12_+_11694172_11694328	0.186437	SOX2.p2	U11732|ETV6|2120|ets variant 6	EU446474|ETV6|2120|ets variant 6	Z35761|ETV6|2120|ets variant 6
hg18_v1_chr14_+_28311740_28311753	0.186429	SOX2.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg18_v1_chr9_-_32540818_32540908	0.186342	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr7_+_120415958_120416044	0.186026	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr19_+_53664386_53664576	0.185258	SOX2.p2	CR591768|CYTH2|9266|cytohesin 2	CR623405|CYTH2|9266|cytohesin 2	AB209573|CYTH2|9266|cytohesin 2	CR591823|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	CR607678|CYTH2|9266|cytohesin 2	CR612861|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	CR611270|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	CR621270|CYTH2|9266|cytohesin 2	CR593517|CYTH2|9266|cytohesin 2	CR608279|CYTH2|9266|cytohesin 2	CR614084|CYTH2|9266|cytohesin 2	CR616768|CYTH2|9266|cytohesin 2	CR617009|CYTH2|9266|cytohesin 2	CR621404|CYTH2|9266|cytohesin 2	CR608702|CYTH2|9266|cytohesin 2	CR600368|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	CR596472|CYTH2|9266|cytohesin 2	CR598477|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg18_v1_chr1_+_116727514_116727514	0.185044	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr17_-_46479127_46479269	0.185017	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr1_+_238321794_238321807	0.184665	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg18_v1_chr1_-_68688219_68688229	0.184538	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg18_v1_chr6_-_134540666_134540705	0.184381	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr4_+_146250978_146251023	0.184062	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr1_+_24158898_24158969	0.183692	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr5_+_113725914_113725983	0.183621	SOX2.p2	AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
hg18_v1_chr4_+_15292363_15292486	0.183248	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr1_-_229058404_229058404	0.183202	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr9_-_113561613_113561633	0.183147	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr17_+_23723220_23723252	0.183073	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr1_-_199742589_199742589	0.182781	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr11_+_10787328_10787419	0.18256	SOX2.p2	
hg18_v1_chr1_+_182040837_182040991	0.182378	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr2_+_189547323_189547356	0.182308	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr8_-_70907957_70907957	0.182235	SOX2.p2	BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr1_+_219119358_219119411	0.182108	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg18_v1_chr12_+_123023521_123023844	0.18187	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg18_v1_chr7_-_148212310_148212311	0.181813	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chrX_-_103060777_103060803	0.181799	SOX2.p2	AK026512|LOC100128594|100128594|hypothetical LOC100128594
hg18_v1_chr20_+_56904042_56904077	0.181258	SOX2.p2	M77026|GNAS|2778|GNAS complex locus	CR604694|GNAS|2778|GNAS complex locus
hg18_v1_chr20_+_56903595_56903646	0.181139	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg18_v1_chr9_+_35528890_35528938	0.180502	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr22_+_38770610_38771101	0.180302	SOX2.p2	NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr7_+_2638108_2638150	0.179669	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr1_+_246290586_246290606	0.179605	SOX2.p2	BC137039|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	BC137040|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	NM_001004687|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3
hg18_v1_chr12_-_8706746_8706753	0.179471	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chrX_+_51653348_51653538	0.179203	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg18_v1_chr6_+_144654565_144654657	0.178713	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg18_v1_chr3_+_138020550_138020682	0.178696	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	CR602043|TMEM22|80723|transmembrane protein 22	CR602057|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22	CR618483|TMEM22|80723|transmembrane protein 22
hg18_v1_chr13_-_31900218_31900499	0.178036	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg18_v1_chr8_-_17315386_17315410	0.177771	SOX2.p2	NM_004686|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr10_-_75080784_75080805	0.177538	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg18_v1_chr14_+_75141557_75141557	0.177484	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr7_+_94135384_94135392	0.176832	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg18_v1_chr10_-_98326435_98326563	0.176804	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr22_-_43272567_43272997	0.176678	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr8_-_82557956_82558030	0.176478	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg18_v1_chr17_+_23723180_23723191	0.176315	SOX2.p2	AY444166|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr5_+_139008209_139008493	0.176153	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr14_-_87529222_87529403	0.176023	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase
hg18_v1_chr2_-_20375497_20375564	0.17589	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr12_+_21417068_21417122	0.175865	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg18_v1_chr17_+_23723113_23723156	0.175588	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr11_+_55617328_55617359	0.17556	SOX2.p2	BC137007|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	BC137008|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	NM_001003750|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2
hg18_v1_chr2_+_189547358_189547368	0.175555	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr5_-_150517454_150517495	0.175512	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg18_v1_chr8_-_38445272_38445345	0.175186	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chrX_-_73429101_73429159	0.174986	SOX2.p2	AK057701|MIR374AHG|100302692|mir-374a-545 cluster host gene (non-protein coding)
hg18_v1_chr12_+_30970882_30970973	0.174374	SOX2.p2	AK293947|TSPAN11|441631|tetraspanin 11
hg18_v1_chr19_-_21742162_21742269	0.172962	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg18_v1_chr12_+_48765300_48765461	0.172557	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr7_-_148212336_148212382	0.172091	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr1_+_176577228_176577286	0.171638	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg18_v1_chr6_-_76259976_76260217	0.171536	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr1_-_205210567_205210592	0.171015	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr8_-_110762409_110762409	0.170975	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr3_+_66094324_66094324	0.170902	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr13_+_45174446_45174446	0.170678	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr6_-_89984214_89984214	0.17043	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg18_v1_chr4_+_57469122_57469266	0.170219	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg18_v1_chr8_+_17866373_17866408	0.169987	SOX2.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr3_-_116348780_116348829	0.169967	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr10_+_44775155_44775321	0.169933	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr1_+_47572209_47572247	0.169547	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr11_-_6870306_6870405	0.169525	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr2_+_88148413_88148516	0.169163	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr8_+_121892719_121892725	0.168144	SOX2.p2	
hg18_v1_chr11_+_8016755_8016755	0.168103	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr17_-_10393664_10393741	0.167849	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg18_v1_chr13_+_38510440_38510631	0.16782	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	CR613108|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3	CR601315|NHLRC3|387921|NHL repeat containing 3
hg18_v1_chr13_-_24394913_24395026	0.167532	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg18_v1_chr8_+_69026895_69026917	0.166786	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr20_-_49612574_49612574	0.166422	SOX2.p2	EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr19_-_45016587_45016689	0.166355	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg18_v1_chr11_-_125730622_125730642	0.166161	SOX2.p2	
hg18_v1_chrX_-_64112993_64113155	0.16615	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	CR614211|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg18_v1_chr7_-_92301147_92301166	0.165879	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr4_+_189297591_189297638	0.165677	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr17_+_11864841_11864972	0.16555	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr2_+_217206327_217206441	0.16552	SOX2.p2	CR618404|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR625740|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR614828|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR595316|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR592781|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR602232|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR606610|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR607166|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR610845|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR611812|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR623237|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR624731|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR590929|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR603359|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg18_v1_chr17_-_45621312_45621316	0.165142	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr11_+_46256130_46256143	0.164982	SOX2.p2	BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr13_-_107317460_107317460	0.164952	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr7_-_122126422_122126445	0.164905	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg18_v1_chr4_+_15292500_15292601	0.164846	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr5_-_148422799_148422929	0.164825	SOX2.p2	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2	NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2
hg18_v1_chrX_+_142794838_142794838	0.1648	SOX2.p2	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg18_v1_chr7_-_99517128_99517398	0.164777	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	CR616475|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg18_v1_chr4_-_110843999_110844081	0.164076	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg18_v1_chr12_+_102859354_102859421	0.163879	SOX2.p2	CR606918|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1
hg18_v1_chr18_-_21184824_21185468	0.163631	SOX2.p2	
hg18_v1_chr20_+_60558104_60558104	0.163438	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr1_+_25629968_25630176	0.163391	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr7_+_2638156_2638303	0.162715	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr2_+_48610796_48610862	0.162522	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr8_+_26491838_26491851	0.162497	SOX2.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr9_-_97308687_97308702	0.162169	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg18_v1_chr1_+_12757570_12757570	0.162068	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg18_v1_chr10_+_49562866_49562926	0.161987	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr4_+_39874921_39875152	0.161846	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	CR619539|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	CR607001|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg18_v1_chr2_+_68445936_68445987	0.161167	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg18_v1_chr5_-_111121691_111121813	0.160749	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr5_+_139155569_139155612	0.160636	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg18_v1_chr4_+_114190233_114190333	0.160476	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr4_-_83570318_83570437	0.160401	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr14_+_59934178_59934231	0.160228	SOX2.p2	
hg18_v1_chr2_-_142605739_142605739	0.160224	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg18_v1_chr17_-_5344898_5345093	0.160196	SOX2.p2	CR622361|LOC728392|728392|hypothetical protein LOC728392	AF217966|LOC728392|728392|hypothetical protein LOC728392	CR604079|LOC728392|728392|hypothetical protein LOC728392	CR619296|LOC728392|728392|hypothetical protein LOC728392	CR623524|LOC728392|728392|hypothetical protein LOC728392	CR608370|LOC728392|728392|hypothetical protein LOC728392	CR620539|LOC728392|728392|hypothetical protein LOC728392	CR612487|LOC728392|728392|hypothetical protein LOC728392	CR612489|LOC728392|728392|hypothetical protein LOC728392	AF131825|LOC728392|728392|hypothetical protein LOC728392	CR620726|LOC728392|728392|hypothetical protein LOC728392	NM_001162371|LOC728392|728392|hypothetical protein LOC728392	CR618493|LOC728392|728392|hypothetical protein LOC728392
hg18_v1_chr1_-_202730135_202730642	0.160004	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chr15_-_21483457_21483495	0.159978	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr2_+_128644510_128644524	0.159678	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg18_v1_chr6_+_17390910_17391056	0.159367	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr5_+_125828685_125828745	0.158981	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr12_-_101398429_101398436	0.158943	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr4_-_170314382_170314407	0.158776	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr7_+_142670624_142670710	0.158765	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	CR614943|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	CR600089|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1	CR615801|GSTK1|373156|glutathione S-transferase kappa 1	AK289570|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chrX_-_139694248_139694388	0.158609	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg18_v1_chr1_+_199259664_199259757	0.158528	SOX2.p2	
hg18_v1_chr15_-_70385709_70385709	0.157691	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chrX_+_9392980_9393489	0.157639	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg18_v1_chr7_-_148212312_148212316	0.157541	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr8_+_7731402_7731402	0.157468	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr15_+_72397934_72397983	0.156944	SOX2.p2	AK290709|CCDC33|80125|coiled-coil domain containing 33	AK310852|CCDC33|80125|coiled-coil domain containing 33	AK026821|CCDC33|80125|coiled-coil domain containing 33	NM_182791|CCDC33|80125|coiled-coil domain containing 33	BC025689|CCDC33|80125|coiled-coil domain containing 33
hg18_v1_chr1_-_3556420_3556530	0.156933	SOX2.p2	CR626114|WDR8|49856|WD repeat domain 8	CR619231|WDR8|49856|WD repeat domain 8	CR605005|WDR8|49856|WD repeat domain 8	AB034912|WDR8|49856|WD repeat domain 8	CR597189|WDR8|49856|WD repeat domain 8	AK000437|WDR8|49856|WD repeat domain 8	AK225525|WDR8|49856|WD repeat domain 8	BC002611|WDR8|49856|WD repeat domain 8	BC086311|WDR8|49856|WD repeat domain 8	CR613845|WDR8|49856|WD repeat domain 8	CR599166|WDR8|49856|WD repeat domain 8	CR596816|WDR8|49856|WD repeat domain 8	AK302397|WDR8|49856|WD repeat domain 8	NM_017818|WDR8|49856|WD repeat domain 8
hg18_v1_chr5_-_64813459_64813502	0.15664	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg18_v1_chr2_-_40532651_40532802	0.156438	SOX2.p2	Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr10_-_104943000_104943074	0.156192	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr11_-_5662762_5662917	0.155876	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr15_+_91244422_91244559	0.155848	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr11_+_48466844_48466920	0.155809	SOX2.p2	BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47
hg18_v1_chr4_+_71986927_71987035	0.15539	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr5_+_140235114_140235241	0.155276	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12
hg18_v1_chr17_-_39796649_39796847	0.154768	SOX2.p2	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2	NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2
hg18_v1_chr1_+_40688360_40688414	0.15465	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr7_+_71937980_71938091	0.154317	SOX2.p2	CR607512|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR607679|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR599716|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR610804|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg18_v1_chr11_+_72696963_72697141	0.154247	SOX2.p2	AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr1_-_223907283_223907538	0.153647	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr1_+_47572075_47572204	0.15359	SOX2.p2	BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	CR602827|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr2_-_207291364_207291364	0.153135	SOX2.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr7_+_77005287_77005321	0.152936	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr7_-_107930170_107930246	0.152894	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg18_v1_chr14_-_79748273_79748277	0.152782	SOX2.p2	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	NM_013989|DIO2|1734|deiodinase, iodothyronine, type II
hg18_v1_chr1_-_149698516_149698594	0.152297	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr22_-_40666168_40666168	0.152029	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg18_v1_chr1_+_164063684_164063736	0.151971	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr7_+_56086933_56086955	0.151642	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr11_-_66201894_66201973	0.151634	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B	CR591230|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr12_-_101398470_101398474	0.151428	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr10_-_44775110_44775116	0.150975	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr4_-_57216816_57217013	0.150749	SOX2.p2	AB019573|HOPX|84525|HOP homeobox	AM393649|HOPX|84525|HOP homeobox	DQ892193|HOPX|84525|HOP homeobox	EU176669|HOPX|84525|HOP homeobox	CR626269|HOPX|84525|HOP homeobox	CR600537|HOPX|84525|HOP homeobox
hg18_v1_chr7_+_20337249_20337270	0.150509	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr8_-_105670300_105670398	0.150378	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr17_-_39094787_39094815	0.149918	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr2_-_98714020_98714070	0.149521	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr7_-_115458064_115458112	0.149377	SOX2.p2	CR933605|TFEC|22797|transcription factor EC
hg18_v1_chr2_+_188865634_188865755	0.149369	SOX2.p2	NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr7_+_56086871_56086929	0.149297	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr3_-_120761092_120761170	0.149139	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg18_v1_chrX_-_2857315_2857348	0.149108	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg18_v1_chr3_+_69895651_69895651	0.148518	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr3_-_11598829_11598837	0.148125	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr12_-_54901900_54901928	0.148065	SOX2.p2	BC011626|RNF41|10193|ring finger protein 41	CR602750|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg18_v1_chr19_+_44886785_44886981	0.147995	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr8_-_93181091_93181091	0.147866	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr8_-_27524744_27524854	0.147823	SOX2.p2	M25915|CLU|1191|clusterin	BX648414|CLU|1191|clusterin	NM_203339|CLU|1191|clusterin
hg18_v1_chr22_-_37481403_37481418	0.14776	SOX2.p2	BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr15_-_86890796_86890915	0.14765	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg18_v1_chr11_+_125730760_125730771	0.147246	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr10_+_97461525_97461525	0.146866	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr1_-_41399632_41399690	0.146723	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr12_-_101398451_101398453	0.146612	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr5_-_34078991_34079127	0.146196	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg18_v1_chr1_-_151910052_151910056	0.14601	SOX2.p2	BC000382|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR601055|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR603695|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR623344|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr7_+_154943466_154943584	0.145915	SOX2.p2	BC104970|EN2|2020|engrailed homeobox 2	BC104972|EN2|2020|engrailed homeobox 2	NM_001427|EN2|2020|engrailed homeobox 2
hg18_v1_chr12_+_30971104_30971158	0.145425	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg18_v1_chr11_-_82460518_82460525	0.145307	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr12_-_101398503_101398521	0.144966	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr1_-_202432165_202432250	0.144934	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr1_+_26896519_26896593	0.144819	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr1_-_151910041_151910051	0.144338	SOX2.p2	CR606686|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR624512|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR590641|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR590138|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR620610|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr9_-_90983501_90983559	0.144267	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr1_-_151910080_151910095	0.144241	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr9_+_94766379_94766403	0.143864	SOX2.p2	CR591538|FGD3|89846|FYVE, RhoGEF and PH domain containing 3
hg18_v1_chr15_-_97607108_97607350	0.143541	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr4_+_1842947_1843045	0.143251	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr14_-_23090606_23090714	0.142906	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr4_+_71806538_71806631	0.142874	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	CR598922|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg18_v1_chr8_-_42742729_42742931	0.142756	SOX2.p2	Y16282|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	BC014456|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	U62435|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK298798|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK313521|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg18_v1_chrX_+_92815667_92815667	0.142732	SOX2.p2	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A	NM_001171110|FAM133A|286499|family with sequence similarity 133, member A	NM_001171111|FAM133A|286499|family with sequence similarity 133, member A	NM_173698|FAM133A|286499|family with sequence similarity 133, member A
hg18_v1_chr2_-_152663454_152663498	0.142646	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr1_+_82038669_82038669	0.142573	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr7_-_47588160_47588217	0.142572	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg18_v1_chr5_-_88004891_88004912	0.142553	SOX2.p2	AK311230|LOC645323|645323|hypothetical LOC645323	AK309800|LOC645323|645323|hypothetical LOC645323	AK308694|LOC645323|645323|hypothetical LOC645323	BC036480|LOC645323|645323|hypothetical LOC645323
hg18_v1_chr4_-_54625223_54625344	0.142468	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr11_+_58888460_58888507	0.142454	SOX2.p2	BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1	NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1
hg18_v1_chr3_-_161765765_161765812	0.142189	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr3_+_73128771_73128849	0.142115	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr15_-_70838703_70838831	0.141869	SOX2.p2	
hg18_v1_chr8_+_107529327_107529327	0.141828	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr4_-_26100986_26101181	0.141751	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg18_v1_chr1_-_151910057_151910079	0.141739	SOX2.p2	CR599497|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR606140|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR610317|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR618428|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR598787|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR607979|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR610359|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR610897|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR616375|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR618172|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR591072|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR607965|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR603919|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR617374|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR623082|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR593106|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR599153|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR613973|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR613974|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR593428|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	CR611903|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr2_+_68445821_68445931	0.141562	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg18_v1_chr6_+_41148691_41148710	0.141558	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr11_-_10786875_10787026	0.141529	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr2_-_242205556_242205588	0.141426	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr11_+_71387572_71387756	0.141319	SOX2.p2	CR605363|IL18BP|10068|interleukin 18 binding protein	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg18_v1_chr5_+_53787187_53787376	0.141136	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg18_v1_chr12_+_48443232_48443347	0.140956	SOX2.p2	CR624817|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr5_+_180348450_180348564	0.140888	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg18_v1_chr15_-_62782427_62782469	0.140805	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr1_+_6607796_6607865	0.140408	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR601567|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR609298|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR600833|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR620139|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr5_+_178300799_178300843	0.140363	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg18_v1_chr7_+_128795280_128795369	0.140293	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_+_154855709_154855912	0.140263	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg18_v1_chr19_+_10515570_10515590	0.1402	SOX2.p2	AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr2_-_44440358_44440391	0.139806	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg18_v1_chr4_+_120167721_120167721	0.139594	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg18_v1_chrX_-_2857351_2857426	0.139369	SOX2.p2	AK314479|ARSD|414|arylsulfatase D	AK021472|ARSD|414|arylsulfatase D	NM_001669|ARSD|414|arylsulfatase D	NM_009589|ARSD|414|arylsulfatase D	X83572|ARSD|414|arylsulfatase D
hg18_v1_chr15_-_62782470_62782502	0.139341	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr10_+_92970302_92970474	0.139201	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr1_-_24112345_24112438	0.13844	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg18_v1_chr10_-_50066386_50066479	0.138284	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr4_+_113777568_113777568	0.138159	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr12_+_48765209_48765299	0.137901	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr1_-_31311349_31311391	0.137882	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr15_-_21483503_21483548	0.13765	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chr1_-_41398126_41398191	0.137423	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr7_+_113853790_113853942	0.137146	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr9_-_73715666_73715825	0.13699	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr1_-_198645695_198645785	0.136862	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr3_-_195835197_195835231	0.136693	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44
hg18_v1_chr11_-_103539895_103540113	0.136676	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg18_v1_chr7_+_73136254_73136286	0.136608	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr4_-_113777569_113777599	0.13649	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr9_-_35101592_35101619	0.136392	SOX2.p2	CR601417|KIAA1539|80256|KIAA1539
hg18_v1_chr2_-_215998181_215998254	0.136251	SOX2.p2	AF312399|FN1|2335|fibronectin 1
hg18_v1_chr13_+_34948885_34948965	0.136187	SOX2.p2	AK294737|NBEA|26960|neurobeachin	AK315939|NBEA|26960|neurobeachin
hg18_v1_chr1_+_199742906_199743063	0.136018	SOX2.p2	
hg18_v1_chr5_-_43638860_43639042	0.135818	SOX2.p2	
hg18_v1_chr19_+_20897898_20897967	0.135757	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85	CR604668|ZNF85|7639|zinc finger protein 85
hg18_v1_chr9_+_102380156_102380264	0.135645	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg18_v1_chr12_-_8706637_8706699	0.135581	SOX2.p2	U37283|MFAP5|8076|microfibrillar associated protein 5	NM_003480|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr6_+_129245978_129246034	0.135382	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg18_v1_chr15_-_47125788_47126069	0.13505	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr15_-_53822468_53822569	0.135024	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr5_-_78318112_78318112	0.134802	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg18_v1_chr1_-_160648429_160648551	0.134674	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr3_-_171013145_171013413	0.134625	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34	CR606238|LRRC34|151827|leucine rich repeat containing 34
hg18_v1_chr1_-_31311140_31311218	0.134457	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr10_+_70172257_70172311	0.13373	SOX2.p2	AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr11_-_125730655_125730691	0.133525	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr1_-_171905593_171905625	0.13346	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg18_v1_chr1_-_43692134_43692246	0.133442	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr9_+_70161634_70161634	0.13316	SOX2.p2	BC033073|PGM5|5239|phosphoglucomutase 5	NM_021965|PGM5|5239|phosphoglucomutase 5
hg18_v1_chrX_-_142551587_142551591	0.133136	SOX2.p2	NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr6_-_32268267_32268419	0.132815	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr9_+_66197108_66197135	0.132804	SOX2.p2	
hg18_v1_chr6_-_32268615_32268693	0.132661	SOX2.p2	CR623296|GPSM3|63940|G-protein signaling modulator 3	CR604341|GPSM3|63940|G-protein signaling modulator 3	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr17_-_16816113_16816145	0.132384	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr6_-_11340886_11340886	0.132241	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr19_+_977627_977697	0.13165	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	CR598250|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	CR611249|CNN2|1265|calponin 2	CR615042|CNN2|1265|calponin 2	CR618608|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	CR592852|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	CR606476|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg18_v1_chr5_+_43638495_43638698	0.131568	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg18_v1_chr5_-_114659863_114659885	0.13143	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg18_v1_chr7_+_68702516_68702532	0.131216	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg18_v1_chr5_+_140154627_140154733	0.130849	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg18_v1_chr5_+_57914658_57914695	0.130649	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg18_v1_chr1_-_25164061_25164198	0.130516	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr19_+_19837625_19837743	0.130489	SOX2.p2	BC053607|ZNF253|56242|zinc finger protein 253	BC014148|ZNF253|56242|zinc finger protein 253	NM_021047|ZNF253|56242|zinc finger protein 253	BC065572|ZNF253|56242|zinc finger protein 253	AK074757|ZNF253|56242|zinc finger protein 253	BC125063|ZNF253|56242|zinc finger protein 253	BC125064|ZNF253|56242|zinc finger protein 253
hg18_v1_chr7_+_128615948_128615948	0.130442	SOX2.p2	BC009989|SMO|6608|smoothened homolog (Drosophila)	NM_005631|SMO|6608|smoothened homolog (Drosophila)
hg18_v1_chr14_-_87529212_87529221	0.130257	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg18_v1_chr4_-_109308893_109309603	0.129889	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr1_+_198975227_198975361	0.129717	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr4_-_57217226_57217444	0.129646	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg18_v1_chr4_+_54660954_54661004	0.12944	SOX2.p2	AB028838|GSX2|170825|GS homeobox 2	EU596451|GSX2|170825|GS homeobox 2	NM_133267|GSX2|170825|GS homeobox 2
hg18_v1_chr12_-_7709734_7709768	0.129439	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg18_v1_chr20_-_45418818_45418973	0.129099	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr1_-_74971679_74971679	0.128847	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr6_+_41148869_41148938	0.12878	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr2_-_86276403_86276403	0.128307	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr14_-_87529600_87529659	0.128172	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr1_+_93317374_93317469	0.128153	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr19_-_10474266_10474611	0.128002	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg18_v1_chr10_-_11693535_11693750	0.12783	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr2_-_56003859_56003859	0.127812	SOX2.p2	NM_004105|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg18_v1_chr13_+_97403929_97403948	0.127606	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg18_v1_chr5_+_140573692_140573721	0.127496	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg18_v1_chr11_+_94398069_94398069	0.127115	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg18_v1_chr3_+_99733432_99733567	0.127024	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chrX_+_54963953_54964012	0.126975	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg18_v1_chr17_+_1566566_1566644	0.126856	SOX2.p2	AK298567|WDR81|124997|WD repeat domain 81	NM_001163673|WDR81|124997|WD repeat domain 81	NM_152348|WDR81|124997|WD repeat domain 81	AK091136|WDR81|124997|WD repeat domain 81	BC114519|WDR81|124997|WD repeat domain 81	BC114568|WDR81|124997|WD repeat domain 81
hg18_v1_chr5_+_140790141_140790268	0.126825	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr11_-_82460531_82460560	0.126685	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr1_+_112740380_112740403	0.126573	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr5_+_140790365_140790389	0.12631	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr17_-_74432671_74432750	0.126307	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr8_-_105670410_105670437	0.126246	SOX2.p2	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr11_-_10787028_10787079	0.126153	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr7_+_55400634_55400634	0.125963	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr17_+_7427688_7427688	0.12573	SOX2.p2	NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr7_-_115458010_115458034	0.125633	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg18_v1_chr11_+_13646727_13646805	0.125606	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr1_-_31311073_31311136	0.125584	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr1_-_172258129_172258147	0.125334	SOX2.p2	
hg18_v1_chr3_+_19963865_19963945	0.125262	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr19_+_19872700_19872869	0.125197	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg18_v1_chr10_+_35455986_35456061	0.124887	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_+_43628136_43628170	0.124869	SOX2.p2	BC017576|C1orf84|149469|chromosome 1 open reading frame 84	NM_001012961|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr3_+_69895310_69895396	0.124661	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr12_+_68265714_68265919	0.124536	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr22_+_22445035_22445056	0.123718	SOX2.p2	AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)
hg18_v1_chr11_+_113280727_113280865	0.123484	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg18_v1_chr11_+_89032112_89032112	0.12339	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg18_v1_chr3_+_161040343_161040432	0.123103	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr9_-_35738875_35739029	0.123047	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr6_+_39868116_39868119	0.122993	SOX2.p2	
hg18_v1_chr2_-_86276102_86276231	0.122921	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr8_+_17478214_17478214	0.122544	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg18_v1_chr19_+_10515591_10515765	0.12246	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr18_-_28247193_28247194	0.12228	SOX2.p2	
hg18_v1_chr4_+_83570789_83570838	0.121968	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	CR615673|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	CR623426|ENOPH1|58478|enolase-phosphatase 1	CR593619|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr3_+_23904086_23904139	0.121651	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr1_-_198643885_198643899	0.121151	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr11_-_128217550_128217626	0.120762	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg18_v1_chr2_+_15998010_15998020	0.120652	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg18_v1_chr12_-_16652202_16652290	0.120575	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr17_+_7427877_7427915	0.120489	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR609049|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR601665|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR600077|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR591406|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR618168|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR610474|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chrX_+_149364377_149364504	0.120426	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg18_v1_chr2_-_55131096_55131118	0.120272	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chr1_-_149385556_149385787	0.120234	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg18_v1_chr4_-_55686503_55686520	0.120139	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg18_v1_chr19_+_17923110_17923110	0.119919	SOX2.p2	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
hg18_v1_chrX_-_85189194_85189221	0.119918	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr4_+_95348017_95348257	0.119588	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg18_v1_chr10_+_92970487_92970541	0.119325	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr2_-_180319013_180319013	0.119169	SOX2.p2	AK096822|ZNF385B|151126|zinc finger protein 385B	NM_001113397|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr3_+_161040439_161040667	0.119122	SOX2.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr21_-_33065849_33066042	0.118921	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	CR603496|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg18_v1_chr8_-_93099040_93099083	0.118808	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr6_-_11340887_11340906	0.118795	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr11_+_46256161_46256238	0.11869	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr1_+_6607511_6607511	0.118567	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr4_+_100651183_100651222	0.118183	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr16_+_88515917_88515917	0.118106	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3	NM_001197181|TUBB3|10381|tubulin, beta 3
hg18_v1_chr9_-_124370576_124370658	0.118007	SOX2.p2	NM_001004454|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8	BC140910|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8
hg18_v1_chr11_-_92570626_92570645	0.117821	SOX2.p2	
hg18_v1_chr17_-_53420473_53420593	0.117767	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr21_+_44856423_44856429	0.117557	SOX2.p2	AB076355|KRTAP10-8|386681|keratin associated protein 10-8	NM_198695|KRTAP10-8|386681|keratin associated protein 10-8	BC127016|KRTAP10-8|386681|keratin associated protein 10-8
hg18_v1_chr12_+_62523648_62524339	0.117516	SOX2.p2	
hg18_v1_chr3_-_195835298_195835497	0.117506	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr21_+_26029602_26029672	0.117473	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr9_+_102275455_102275646	0.117261	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr1_+_112740322_112740376	0.117245	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr11_+_100063061_100063616	0.116753	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr14_-_106170414_106170713	0.116501	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr5_+_139008139_139008197	0.1164	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr18_+_70317548_70317603	0.116306	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chrX_-_43717864_43717864	0.116196	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr11_+_5862076_5862098	0.116095	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg18_v1_chr7_+_56086960_56087060	0.11562	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr10_-_69661860_69661860	0.11558	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr3_+_38470782_38470813	0.115466	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr5_+_175725050_175725140	0.115271	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg18_v1_chr9_-_14303509_14303718	0.115242	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg18_v1_chr2_+_24660849_24660913	0.115176	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr21_-_39642808_39642873	0.115035	SOX2.p2	BC071643|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619497|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619783|HMGN1|3150|high-mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high-mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high-mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr15_+_70553719_70553724	0.115026	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr15_+_100163424_100163445	0.11482	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr6_+_41148665_41148690	0.114609	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr7_-_8268206_8268277	0.114406	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr5_+_140790310_140790352	0.114127	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr17_-_64568641_64568730	0.113981	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr14_-_91483757_91483798	0.113707	SOX2.p2	CR615971|FBLN5|10516|fibulin 5	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg18_v1_chr15_-_23204887_23204952	0.113558	SOX2.p2	AB194232|UBE3A|7337|ubiquitin protein ligase E3A	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A	X98031|UBE3A|7337|ubiquitin protein ligase E3A	AF002225|UBE3A|7337|ubiquitin protein ligase E3A
hg18_v1_chr9_-_74169445_74169645	0.113386	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr7_+_47661366_47661366	0.113237	SOX2.p2	AK126096|C7orf65|401335|chromosome 7 open reading frame 65	NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65
hg18_v1_chr13_+_48582389_48582525	0.112925	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr5_+_38439399_38439406	0.112917	SOX2.p2	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182799|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg18_v1_chr17_-_60088773_60088881	0.112899	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr7_-_150411504_150411571	0.1127	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr18_-_59137488_59137592	0.112498	SOX2.p2	BC027258|BCL2|596|B-cell CLL/lymphoma 2	NM_000633|BCL2|596|B-cell CLL/lymphoma 2	NM_000657|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chr1_+_43628186_43628226	0.112315	SOX2.p2	BC051343|C1orf84|149469|chromosome 1 open reading frame 84	AK091821|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr19_-_45416112_45416145	0.1123	SOX2.p2	CR610812|TTC9B|148014|tetratricopeptide repeat domain 9B	CR626768|TTC9B|148014|tetratricopeptide repeat domain 9B	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B	AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B	BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B	CR596147|TTC9B|148014|tetratricopeptide repeat domain 9B	NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B
hg18_v1_chr12_+_123339662_123339662	0.111972	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg18_v1_chr2_+_188865796_188865857	0.11186	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	CR619595|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr4_-_118226119_118226183	0.111814	SOX2.p2	CR596564|TRAM1L1|133022|translocation associated membrane protein 1-like 1	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1	BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1	NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1
hg18_v1_chr20_+_30409649_30410014	0.111695	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg18_v1_chr7_-_23476497_23476549	0.111687	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg18_v1_chr5_+_96237923_96237965	0.111685	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg18_v1_chr5_-_83052606_83052775	0.11131	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr1_-_203985896_203985931	0.111231	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr20_-_1298493_1298697	0.111167	SOX2.p2	CR615284|FKBP1A|2280|FK506 binding protein 1A, 12kDa	CR602019|FKBP1A|2280|FK506 binding protein 1A, 12kDa
hg18_v1_chr14_+_51397059_51397088	0.111021	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr8_+_69027277_69027292	0.111021	SOX2.p2	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr1_+_112740378_112740378	0.110961	SOX2.p2	
hg18_v1_chr15_+_72694387_72694387	0.110789	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg18_v1_chr2_-_86276015_86276101	0.11056	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr6_-_87861492_87861568	0.110489	SOX2.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	CR615870|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591147|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611908|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591068|CGA|1081|glycoprotein hormones, alpha polypeptide	CR596397|CGA|1081|glycoprotein hormones, alpha polypeptide	CR598298|CGA|1081|glycoprotein hormones, alpha polypeptide	CR616045|CGA|1081|glycoprotein hormones, alpha polypeptide	CR626155|CGA|1081|glycoprotein hormones, alpha polypeptide	CR607107|CGA|1081|glycoprotein hormones, alpha polypeptide	CR595519|CGA|1081|glycoprotein hormones, alpha polypeptide	CR599056|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611195|CGA|1081|glycoprotein hormones, alpha polypeptide	CR602651|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	CR610488|CGA|1081|glycoprotein hormones, alpha polypeptide	CR622170|CGA|1081|glycoprotein hormones, alpha polypeptide
hg18_v1_chr1_-_229071957_229071957	0.11023	SOX2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr12_+_53177758_53177786	0.110191	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr4_-_76817587_76817620	0.110063	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr19_-_15451203_15451316	0.110045	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg18_v1_chr9_-_37455429_37455453	0.110006	SOX2.p2	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr10_-_119795663_119796405	0.109828	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg18_v1_chr11_-_5130174_5130174	0.10969	SOX2.p2	BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1
hg18_v1_chr16_+_67131161_67131161	0.109568	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr8_-_7320013_7320013	0.109479	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr2_-_210744158_210744432	0.109453	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr2_-_165768798_165768849	0.109449	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg18_v1_chr8_+_73612179_73612216	0.109385	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg18_v1_chr8_+_61592097_61592104	0.109151	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr1_-_152422218_152422257	0.108885	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg18_v1_chr1_-_49014993_49015176	0.108569	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg18_v1_chr9_-_37455384_37455406	0.108487	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr14_-_44673418_44673495	0.10825	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr18_+_54682261_54682397	0.108005	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr12_-_54901946_54902039	0.107765	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	CR623486|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41
hg18_v1_chr4_-_76817635_76817717	0.107706	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr5_+_139008667_139008718	0.107616	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr10_+_124885556_124885610	0.107343	SOX2.p2	NM_001105574|HMX3|340784|H6 family homeobox 3
hg18_v1_chr5_-_137882303_137882450	0.107315	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr17_-_40339919_40339965	0.107213	SOX2.p2	CR591619|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr8_+_24207524_24207581	0.107193	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg18_v1_chr17_+_65582981_65583070	0.107189	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr1_+_90233238_90233371	0.107155	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr2_+_11212990_11213015	0.106926	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr3_-_46879883_46879976	0.10674	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg18_v1_chr14_-_44673408_44673417	0.106715	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa	CR613618|FKBP3|2287|FK506 binding protein 3, 25kDa	CR599673|FKBP3|2287|FK506 binding protein 3, 25kDa	CR623899|FKBP3|2287|FK506 binding protein 3, 25kDa	CR610696|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr17_+_3993166_3993298	0.106545	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	CR596829|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr6_+_97117144_97117237	0.106493	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr6_-_11340869_11340885	0.106424	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr2_-_73817935_73818024	0.106416	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg18_v1_chr1_+_103898844_103898844	0.106392	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg18_v1_chr18_-_28247186_28247192	0.106328	SOX2.p2	
hg18_v1_chr3_+_108578877_108579124	0.106307	SOX2.p2	AK058091|CCDC54|84692|coiled-coil domain containing 54	NM_032600|CCDC54|84692|coiled-coil domain containing 54	BC030780|CCDC54|84692|coiled-coil domain containing 54	AF367469|CCDC54|84692|coiled-coil domain containing 54	DQ890829|CCDC54|84692|coiled-coil domain containing 54	DQ890830|CCDC54|84692|coiled-coil domain containing 54	DQ893985|CCDC54|84692|coiled-coil domain containing 54
hg18_v1_chr14_-_37795290_37795324	0.106275	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr1_-_188713324_188713393	0.106265	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr10_-_98263434_98263672	0.106211	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg18_v1_chr15_-_62782399_62782413	0.106098	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr14_+_51396799_51396881	0.105999	SOX2.p2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr1_-_70443748_70443849	0.10594	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg18_v1_chr1_+_22200735_22200753	0.105867	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg18_v1_chr11_+_13646806_13646820	0.105839	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr1_-_151910098_151910130	0.105737	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg18_v1_chr3_+_152970904_152970937	0.105723	SOX2.p2	BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene
hg18_v1_chr11_+_125730773_125730817	0.105608	SOX2.p2	CR598875|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR616349|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR602167|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614162|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595606|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595607|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR624587|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614499|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr2_+_24003648_24003674	0.105308	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg18_v1_chr1_+_76312962_76313138	0.105003	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr5_-_172976196_172976210	0.104929	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chrX_-_138114817_138114833	0.104809	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr4_-_2233606_2233637	0.104554	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr15_+_91244563_91244606	0.104494	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr10_+_35455806_35455963	0.10449	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg18_v1_chr14_+_71468902_71468911	0.104451	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr14_+_69307914_69308067	0.10441	SOX2.p2	CR622610|SRSF5|6430|serine/arginine-rich splicing factor 5
hg18_v1_chr6_-_28412130_28412130	0.104059	SOX2.p2	NM_030899|ZNF323|64288|zinc finger protein 323
hg18_v1_chr10_+_22674379_22674546	0.103962	SOX2.p2	CR591720|SPAG6|9576|sperm associated antigen 6	AK302194|SPAG6|9576|sperm associated antigen 6	NM_012443|SPAG6|9576|sperm associated antigen 6	NM_172242|SPAG6|9576|sperm associated antigen 6	AF079363|SPAG6|9576|sperm associated antigen 6	AK310247|SPAG6|9576|sperm associated antigen 6	AK289903|SPAG6|9576|sperm associated antigen 6	AL080136|SPAG6|9576|sperm associated antigen 6	BC030585|SPAG6|9576|sperm associated antigen 6	AM392674|SPAG6|9576|sperm associated antigen 6	AM392698|SPAG6|9576|sperm associated antigen 6	DQ890916|SPAG6|9576|sperm associated antigen 6	DQ894067|SPAG6|9576|sperm associated antigen 6	CR533552|SPAG6|9576|sperm associated antigen 6
hg18_v1_chr1_-_27871306_27871346	0.103957	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chr4_+_47181987_47182188	0.103931	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg18_v1_chr10_+_35524060_35524123	0.103465	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	CR601807|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg18_v1_chr4_-_141896920_141896979	0.103181	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg18_v1_chr8_+_1940282_1940348	0.102847	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chr1_+_100088394_100088632	0.102846	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr21_+_43903803_43903969	0.102487	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr7_-_23476156_23476253	0.102403	SOX2.p2	
hg18_v1_chr4_+_24923490_24923601	0.102255	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg18_v1_chr17_-_3518654_3518721	0.102255	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr17_+_7427849_7427863	0.102215	SOX2.p2	AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR623337|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr12_+_69046241_69046826	0.101934	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr11_-_71501385_71501473	0.101651	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	CR603805|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg18_v1_chr1_-_198645788_198645846	0.101452	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr1_-_205161821_205162000	0.101237	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	CR625287|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg18_v1_chr8_+_42871319_42871431	0.101146	SOX2.p2	
hg18_v1_chr2_+_238200922_238201274	0.101109	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr4_+_124537334_124537479	0.101079	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr7_-_130443379_130443425	0.100923	SOX2.p2	BC047367|FLJ43663|378805|hypothetical LOC378805	CR622681|FLJ43663|378805|hypothetical LOC378805
hg18_v1_chr1_+_116744992_116745102	0.100714	SOX2.p2	CR614469|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr4_+_83570749_83570788	0.100692	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr21_-_26345294_26345335	0.100534	SOX2.p2	
hg18_v1_chr11_+_124539814_124539859	0.100491	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg18_v1_chr5_+_176807931_176807940	0.100467	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg18_v1_chr19_-_20540380_20540470	0.100256	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg18_v1_chr3_-_87122936_87122946	0.100072	SOX2.p2	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr11_-_5247948_5247948	0.100052	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg18_v1_chr17_+_3993690_3993827	0.0996999	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	CR600228|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	CR621850|CYB5D2|124936|cytochrome b5 domain containing 2	CR592653|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr20_+_19985289_19985351	0.0995597	SOX2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg18_v1_chr11_+_113776582_113776642	0.0995283	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	CR592590|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7	CR593114|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr14_+_51397134_51397150	0.0995104	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr3_+_185516630_185516672	0.0994913	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr11_+_59027624_59027624	0.0994007	SOX2.p2	NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11
hg18_v1_chr2_+_170298487_170298676	0.0993906	SOX2.p2	
hg18_v1_chr1_+_96959762_96959982	0.0993584	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg18_v1_chr12_-_8706533_8706594	0.0993263	SOX2.p2	AK315807|MFAP5|8076|microfibrillar associated protein 5	BC005901|MFAP5|8076|microfibrillar associated protein 5	AK290585|MFAP5|8076|microfibrillar associated protein 5	CR605401|MFAP5|8076|microfibrillar associated protein 5	CR609578|MFAP5|8076|microfibrillar associated protein 5	CR603417|MFAP5|8076|microfibrillar associated protein 5	AK299475|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr8_-_121892877_121893007	0.0991138	SOX2.p2	AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr10_+_126620681_126620681	0.0991081	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr10_+_88975184_88975236	0.0989479	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001099338|FAM22A|728118|family with sequence similarity 22, member A	AB095940|FAM22D|728130|family with sequence similarity 22, member D
hg18_v1_chr11_-_55684368_55684368	0.0988142	SOX2.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chr10_-_97311084_97311174	0.0988101	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr14_+_51397166_51397206	0.0987873	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_+_11213020_11213044	0.0984902	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr11_-_113776262_113776507	0.0983873	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71	CR597454|C11orf71|54494|chromosome 11 open reading frame 71
hg18_v1_chrX_-_142432884_142432972	0.0982545	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr5_+_71538456_71538583	0.0982141	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr4_+_140806536_140806632	0.0981754	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr7_-_99612757_99612970	0.0981131	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr19_+_18391423_18391457	0.0979716	SOX2.p2	
hg18_v1_chr17_+_63252704_63252719	0.09787	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr17_-_64752550_64752581	0.0977188	SOX2.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg18_v1_chr13_-_35842289_35842316	0.0973136	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr22_-_35011703_35011715	0.0969772	SOX2.p2	BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle
hg18_v1_chr20_+_60558369_60558429	0.096916	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr7_+_23603495_23603585	0.0968847	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr11_+_72697310_72697316	0.0967261	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr8_+_79740813_79740938	0.0967185	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr1_-_163680941_163681215	0.0966754	SOX2.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr7_+_23496661_23496723	0.0966487	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg18_v1_chrX_+_145698993_145698993	0.0964848	SOX2.p2	NM_001144064|CXorf51|100129239|chromosome X open reading frame 51
hg18_v1_chr5_-_176671437_176671544	0.0964242	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	CR613684|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	CR626344|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr7_+_26404711_26404863	0.0962164	SOX2.p2	AK056484|LOC441204|441204|hypothetical locus LOC441204
hg18_v1_chr6_+_142510094_142510104	0.096176	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr7_+_150319076_150319124	0.0961529	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr7_-_115458047_115458061	0.0961121	SOX2.p2	AK313546|TFEC|22797|transcription factor EC
hg18_v1_chr14_-_52689782_52689819	0.096108	SOX2.p2	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr17_+_27838665_27838756	0.0959967	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg18_v1_chr1_+_53300410_53300488	0.0959551	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_153703|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg18_v1_chrX_-_37964924_37965215	0.0958007	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	CR625902|SRPX|8406|sushi-repeat containing protein, X-linked	CR597663|SRPX|8406|sushi-repeat containing protein, X-linked	CR606094|SRPX|8406|sushi-repeat containing protein, X-linked	CR609268|SRPX|8406|sushi-repeat containing protein, X-linked	CR613384|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	CR591734|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr9_-_96442351_96442367	0.0957983	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chrX_-_11194015_11194044	0.0957865	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr1_+_37795101_37795193	0.0957691	SOX2.p2	BX647913|DNALI1|7802|dynein, axonemal, light intermediate chain 1	NM_003462|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC039074|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AF006386|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK225935|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK299918|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC046117|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK290502|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK295199|DNALI1|7802|dynein, axonemal, light intermediate chain 1
hg18_v1_chr4_-_76817313_76817368	0.0957648	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr12_-_86947276_86947306	0.0957535	SOX2.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr11_+_119701047_119701047	0.0956604	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr3_+_134976965_134976967	0.0955339	SOX2.p2	U88581|TF|7018|transferrin
hg18_v1_chr4_-_88531245_88531346	0.0954413	SOX2.p2	CR590939|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR603100|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR607201|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg18_v1_chr12_-_105165805_105166150	0.0954145	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr4_-_186693574_186693705	0.095295	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	CR605535|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	CR622133|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg18_v1_chr9_+_39874941_39874982	0.0951058	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr17_-_74432800_74433047	0.0950659	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr2_+_48610567_48610684	0.0950639	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg18_v1_chr9_-_37455250_37455271	0.0948	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr6_-_91063181_91063284	0.0946838	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr4_-_54625463_54625521	0.0945786	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr19_+_3523958_3523999	0.0945704	SOX2.p2	AK314201|HMG20B|10362|high-mobility group 20B	AK090733|HMG20B|10362|high-mobility group 20B	AK310601|HMG20B|10362|high-mobility group 20B	AF318366|HMG20B|10362|high-mobility group 20B
hg18_v1_chr10_+_118340460_118340631	0.0944913	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg18_v1_chr15_-_62782512_62782532	0.0943422	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr8_+_60194328_60194331	0.0941792	SOX2.p2	
hg18_v1_chr17_+_65009986_65010164	0.0941767	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr16_-_30010705_30010791	0.0941072	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg18_v1_chr3_+_43303005_43303141	0.0940555	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr5_+_140568451_140568475	0.0940399	SOX2.p2	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg18_v1_chr8_-_74821610_74821633	0.0940289	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|hypothetical protein LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr4_-_76817582_76817586	0.0939218	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr21_+_26029542_26029597	0.0938228	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr14_+_57964462_57964507	0.0937887	SOX2.p2	NM_014749|KIAA0586|9786|KIAA0586	BC066647|KIAA0586|9786|KIAA0586
hg18_v1_chr6_-_127882192_127882192	0.0937705	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg18_v1_chr2_-_210888010_210888158	0.0936146	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr17_-_45110339_45110523	0.0934396	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	CR595475|SPOP|8405|speckle-type POZ protein	CR603514|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	CR592684|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	CR590571|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg18_v1_chr7_+_44754700_44754715	0.093339	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr16_+_83349816_83349878	0.0932158	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chr2_-_55131124_55131138	0.0931997	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr4_+_170817787_170817873	0.0931722	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3
hg18_v1_chr10_+_82287637_82287637	0.0931114	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg18_v1_chr5_-_176671897_176671915	0.0929293	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3	CR595562|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr19_+_1200882_1200886	0.0928667	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chr17_+_24944605_24944652	0.0926043	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg18_v1_chr2_+_127130209_127130315	0.0925937	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr5_+_140187746_140187860	0.0925556	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg18_v1_chr17_+_22982372_22982378	0.0922042	SOX2.p2	BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR616420|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr15_+_54998181_54998207	0.0920247	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg18_v1_chr1_-_166372526_166372562	0.0919	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr5_+_14493905_14493927	0.0918162	SOX2.p2	CR620371|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chrX_+_102498035_102498118	0.0915294	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5	CR613173|WBP5|51186|WW domain binding protein 5
hg18_v1_chr10_+_123912930_123913001	0.0912897	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr7_+_96583840_96583840	0.091264	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr10_-_113933457_113933534	0.0912593	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg18_v1_chr15_+_57286313_57286376	0.0911047	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr21_-_39642935_39642949	0.0909827	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr17_-_71023048_71023212	0.0907727	SOX2.p2	AF451976|CASKIN2|57513|CASK interacting protein 2	BC032359|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chrX_-_114374860_114374890	0.0907214	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chr17_+_71773026_71773179	0.0904694	SOX2.p2	CR613339|FAM100B|283991|family with sequence similarity 100, member B	CR599986|FAM100B|283991|family with sequence similarity 100, member B	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr7_-_27125738_27125738	0.0904098	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg18_v1_chr16_-_15742883_15743013	0.0903792	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr5_+_149845503_149845761	0.0903428	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg18_v1_chr5_-_44424423_44424622	0.0901897	SOX2.p2	AF508782|FGF10|2255|fibroblast growth factor 10	AB002097|FGF10|2255|fibroblast growth factor 10	AF411527|FGF10|2255|fibroblast growth factor 10	BC069561|FGF10|2255|fibroblast growth factor 10	CR541665|FGF10|2255|fibroblast growth factor 10	CR541688|FGF10|2255|fibroblast growth factor 10	GQ351295|FGF10|2255|fibroblast growth factor 10	NM_004465|FGF10|2255|fibroblast growth factor 10	U67918|FGF10|2255|fibroblast growth factor 10	BC105023|FGF10|2255|fibroblast growth factor 10	BC105021|FGF10|2255|fibroblast growth factor 10
hg18_v1_chr5_-_172687798_172687935	0.0901881	SOX2.p2	CR597612|STC2|8614|stanniocalcin 2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg18_v1_chr19_+_3713650_3713670	0.0901433	SOX2.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr8_+_26296439_26296563	0.0901065	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr19_+_3523950_3523957	0.0900841	SOX2.p2	BC002552|HMG20B|10362|high-mobility group 20B	AK289500|HMG20B|10362|high-mobility group 20B	BC003505|HMG20B|10362|high-mobility group 20B
hg18_v1_chr6_+_47857733_47857761	0.0900096	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5
hg18_v1_chr12_+_9713472_9713597	0.0899386	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg18_v1_chr7_+_142768916_142768931	0.089923	SOX2.p2	AK316227|ZYX|7791|zyxin
hg18_v1_chr9_-_35101534_35101570	0.089916	SOX2.p2	AB040972|KIAA1539|80256|KIAA1539
hg18_v1_chr6_-_31617704_31617746	0.0898192	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR600093|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR612427|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR623314|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR601722|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR625065|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR620111|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	CR590279|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chr12_-_16321885_16321885	0.0897183	SOX2.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr15_+_62230962_62231027	0.089396	SOX2.p2	AK126655|SNX22|79856|sorting nexin 22	AK024014|SNX22|79856|sorting nexin 22	NM_024798|SNX22|79856|sorting nexin 22	BC019655|SNX22|79856|sorting nexin 22	BC036532|SNX22|79856|sorting nexin 22	BC014660|SNX22|79856|sorting nexin 22	BC030225|SNX22|79856|sorting nexin 22	AY044653|SNX22|79856|sorting nexin 22
hg18_v1_chr3_-_153541468_153541468	0.0892564	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr2_+_143603439_143603483	0.0888696	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr2_+_102744921_102744973	0.0887903	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr7_+_128795178_128795266	0.0887466	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr17_-_45427565_45427589	0.0887281	SOX2.p2	BC012361|DLX3|1747|distal-less homeobox 3	BC028970|DLX3|1747|distal-less homeobox 3	AK075167|DLX3|1747|distal-less homeobox 3	AK313257|DLX3|1747|distal-less homeobox 3	NM_005220|DLX3|1747|distal-less homeobox 3
hg18_v1_chr19_-_13074513_13074539	0.0885115	SOX2.p2	M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1
hg18_v1_chr7_+_142670711_142670738	0.0884327	SOX2.p2	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	CR597274|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	CR613327|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1	CR605600|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr17_+_22982319_22982342	0.0883627	SOX2.p2	AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr4_-_147079018_147079236	0.0880804	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr15_-_88148177_88148182	0.0879918	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr17_-_44026321_44026411	0.0879266	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg18_v1_chr8_-_7718769_7718821	0.0878604	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr6_-_11490487_11490566	0.0877327	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr5_+_140780797_140780978	0.0875913	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr17_+_52689372_52689372	0.087482	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr17_-_59403932_59404009	0.0872194	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg18_v1_chr12_-_88573949_88574015	0.0871763	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chr15_-_38118608_38118680	0.0871464	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chr9_-_14303899_14303907	0.0870773	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg18_v1_chr2_-_234441739_234441761	0.0868974	SOX2.p2	AK316372|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr1_-_1701313_1701367	0.0865943	SOX2.p2	AF250320|NADK|65220|NAD kinase	NM_001198994|NADK|65220|NAD kinase
hg18_v1_chr14_+_19414230_19414266	0.0865212	SOX2.p2	BC136941|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	BC136942|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	NM_001005501|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2
hg18_v1_chr4_+_17225344_17225384	0.0864115	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	CR605440|MED28|80306|mediator complex subunit 28	CR618837|MED28|80306|mediator complex subunit 28	CR619532|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	CR607989|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg18_v1_chr7_-_35260213_35260298	0.0863836	SOX2.p2	NM_001077653|TBX20|57057|T-box 20	NM_001166220|TBX20|57057|T-box 20	DQ986374|TBX20|57057|T-box 20
hg18_v1_chr16_-_15741438_15741475	0.0863007	SOX2.p2	BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr2_+_37282516_37282652	0.086143	SOX2.p2	CR604989|LOC100505876|100505876|hypothetical LOC100505876
hg18_v1_chrX_-_133758812_133758927	0.0860225	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr19_-_51856129_51856292	0.0858928	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr15_+_76517623_76517734	0.0857857	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	CR593632|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr11_+_65096395_65096620	0.0855149	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B	CR612503|FAM89B|23625|family with sequence similarity 89, member B	CR616644|FAM89B|23625|family with sequence similarity 89, member B	CR615607|FAM89B|23625|family with sequence similarity 89, member B	CR610230|FAM89B|23625|family with sequence similarity 89, member B
hg18_v1_chr4_+_35962038_35962038	0.0854719	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg18_v1_chr4_-_76868581_76868818	0.0853826	SOX2.p2	
hg18_v1_chr9_-_96442377_96442390	0.0853116	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr7_-_150411345_150411502	0.0853042	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr1_+_246578699_246578699	0.0852339	SOX2.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr5_-_9683462_9683462	0.0851866	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg18_v1_chr22_-_30071761_30071970	0.0849974	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr7_+_129771865_129771936	0.084773	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr17_-_26665194_26665200	0.0847046	SOX2.p2	AK312822|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr5_+_10406980_10407037	0.0846664	SOX2.p2	
hg18_v1_chr9_-_139564656_139564806	0.084507	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr13_-_29938029_29938081	0.0844515	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr6_-_25679197_25679277	0.0844383	SOX2.p2	
hg18_v1_chr12_-_30740011_30740064	0.0841854	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chr1_-_181654027_181654117	0.0841714	SOX2.p2	
hg18_v1_chr3_-_150858274_150858577	0.0841671	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	CR608322|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg18_v1_chr2_+_11213053_11213175	0.0841296	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3	CR602070|PQLC3|130814|PQ loop repeat containing 3	CR624863|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr10_+_17312654_17312716	0.0838991	SOX2.p2	CR609103|VIM|7431|vimentin
hg18_v1_chr8_+_61592105_61592132	0.0837601	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr2_+_37425240_37425382	0.0837345	SOX2.p2	CR608310|QPCT|25797|glutaminyl-peptide cyclotransferase	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase	CR596088|QPCT|25797|glutaminyl-peptide cyclotransferase	CR623589|QPCT|25797|glutaminyl-peptide cyclotransferase
hg18_v1_chr14_+_74299748_74299822	0.0835484	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg18_v1_chr8_-_33490094_33490244	0.0835073	SOX2.p2	AK026916|C8orf41|80185|chromosome 8 open reading frame 41	BX648410|C8orf41|80185|chromosome 8 open reading frame 41	BC007387|C8orf41|80185|chromosome 8 open reading frame 41	BC066935|C8orf41|80185|chromosome 8 open reading frame 41	NM_025115|C8orf41|80185|chromosome 8 open reading frame 41	NM_001102401|C8orf41|80185|chromosome 8 open reading frame 41
hg18_v1_chr12_+_52132154_52132169	0.0833918	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr4_+_86968069_86968088	0.0833137	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr19_+_46207335_46207421	0.0831893	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chr8_+_87947788_87947791	0.0830578	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg18_v1_chr12_-_18134319_18134380	0.0830419	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	CR618874|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg18_v1_chr19_+_45564549_45564697	0.0828515	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr8_+_61592048_61592048	0.0827618	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr5_+_180583315_180583348	0.0827334	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr19_+_49147219_49147236	0.0825598	SOX2.p2	AK314207|ZNF221|7638|zinc finger protein 221	AF187987|ZNF221|7638|zinc finger protein 221	NM_013359|ZNF221|7638|zinc finger protein 221
hg18_v1_chr3_+_130014957_130015132	0.0823582	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr15_+_70553743_70553798	0.0823007	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr4_-_40631397_40631473	0.0821223	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr5_+_140460240_140460417	0.0820716	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg18_v1_chr14_-_105589467_105589979	0.0820375	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr13_-_29937966_29938021	0.0817274	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr12_+_53177806_53177812	0.0815692	SOX2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr19_+_3713671_3713677	0.0814568	SOX2.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr11_+_120478584_120478584	0.0813177	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chr10_+_71232281_71232313	0.0811888	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg18_v1_chr4_+_95898098_95898161	0.0811347	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg18_v1_chr7_+_116907252_116907297	0.0810905	SOX2.p2	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg18_v1_chr16_+_15435825_15435978	0.0809805	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	CR623458|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45	CR616063|C16orf45|89927|chromosome 16 open reading frame 45
hg18_v1_chr19_+_46503524_46503529	0.0808991	SOX2.p2	CR621310|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr1_+_26389638_26389705	0.080665	SOX2.p2	BC144663|CATSPER4|378807|cation channel, sperm associated 4	BC128138|CATSPER4|378807|cation channel, sperm associated 4	BC128139|CATSPER4|378807|cation channel, sperm associated 4	NM_198137|CATSPER4|378807|cation channel, sperm associated 4
hg18_v1_chr20_+_39199263_39199290	0.0805971	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg18_v1_chr9_-_4142182_4142182	0.0805609	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr10_-_99042348_99042380	0.0804248	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chr11_+_128067598_128067598	0.0804072	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr3_+_49543374_49543452	0.080368	SOX2.p2	
hg18_v1_chr1_-_110085182_110085182	0.0803136	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg18_v1_chr20_+_9146036_9146081	0.0802949	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr12_+_53177789_53177803	0.0801814	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr7_-_142769266_142769294	0.0801147	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg18_v1_chr13_-_29067795_29067846	0.0800447	SOX2.p2	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr1_-_149955415_149955505	0.0800153	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr2_+_54536780_54537452	0.0799002	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr1_+_191295206_191295216	0.0797733	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg18_v1_chr19_-_7604569_7604633	0.0796908	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg18_v1_chr7_+_91408086_91408348	0.0796277	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg18_v1_chr12_+_7174230_7174553	0.0794441	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3
hg18_v1_chr12_-_47868563_47868740	0.0792893	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr6_-_31617748_31617811	0.0791515	SOX2.p2	AK127767|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK294939|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK298194|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK316469|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295854|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AB209217|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chr3_-_14963943_14963978	0.0791364	SOX2.p2	
hg18_v1_chr3_+_194793615_194793683	0.0788757	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr4_-_88531353_88531478	0.0788637	SOX2.p2	AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg18_v1_chr20_-_41788975_41789055	0.0788476	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr17_-_60988226_60988234	0.078843	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg18_v1_chr9_+_102275310_102275340	0.0787781	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr16_+_2503676_2503894	0.0787141	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr4_-_54625522_54625525	0.0782694	SOX2.p2	CR624224|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr17_+_40655060_40655226	0.0782641	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg18_v1_chr17_+_36642240_36642277	0.078122	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg18_v1_chr12_-_30721410_30721444	0.0779501	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr4_+_83570980_83571006	0.0778589	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr20_-_45410033_45410076	0.0778545	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr12_+_20739555_20739982	0.0777002	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	CR594946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg18_v1_chr18_-_42751305_42751518	0.0775626	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2
hg18_v1_chr10_+_127398215_127398389	0.0774628	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg18_v1_chr6_+_37511383_37511447	0.0774397	SOX2.p2	
hg18_v1_chr14_-_88953059_88953268	0.0774193	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg18_v1_chr2_-_55130963_55131090	0.0773997	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg18_v1_chr11_-_65082705_65082828	0.07727	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg18_v1_chr11_-_105398118_105398221	0.0772376	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr16_-_45422540_45422638	0.0772341	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr2_+_207115060_207115102	0.0771454	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr2_-_70167569_70167665	0.077112	SOX2.p2	BC040598|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr5_-_77880731_77880827	0.0771009	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr19_+_49180171_49180220	0.0770118	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg18_v1_chr22_-_35233032_35233095	0.0769397	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg18_v1_chr14_+_51397113_51397115	0.0768793	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr8_-_101384633_101384662	0.0766003	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr7_+_28415495_28415532	0.0764557	SOX2.p2	BC087859|LOC401317|401317|hypothetical LOC401317
hg18_v1_chr4_-_176971175_176971175	0.0764226	SOX2.p2	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg18_v1_chr17_-_53335748_53335748	0.076421	SOX2.p2	AK000746|CUEDC1|404093|CUE domain containing 1	NM_017949|CUEDC1|404093|CUE domain containing 1
hg18_v1_chr12_+_4700012_4700046	0.0763085	SOX2.p2	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg18_v1_chr12_-_45506001_45506046	0.0762841	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg18_v1_chr1_-_23758503_23758640	0.0762647	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr3_+_47819402_47819629	0.0762431	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr21_+_26029393_26029402	0.0762139	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr12_-_30740072_30740195	0.0761774	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr4_+_52403922_52404165	0.0760211	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg18_v1_chr5_+_140583098_140583262	0.0759051	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg18_v1_chr13_-_44048391_44048470	0.0758701	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr3_+_48388712_48388768	0.0758207	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg18_v1_chr13_-_26232777_26232929	0.0756863	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg18_v1_chr3_-_87122958_87122962	0.0756616	SOX2.p2	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr12_+_74071145_74071160	0.0756006	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr12_+_27288475_27288503	0.0754834	SOX2.p2	CR602115|STK38L|23012|serine/threonine kinase 38 like	AK304755|STK38L|23012|serine/threonine kinase 38 like	CR606717|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr9_+_114289178_114289289	0.0754699	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr4_+_57468847_57468993	0.0754504	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg18_v1_chr11_+_54891935_54891935	0.0754311	SOX2.p2	NM_001005275|OR4A15|81328|olfactory receptor, family 4, subfamily A, member 15
hg18_v1_chr18_+_54681657_54682014	0.0754163	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr8_-_74821636_74821789	0.0753664	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr5_+_152850276_152850641	0.0753626	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg18_v1_chr13_+_32488477_32488570	0.0753373	SOX2.p2	AB005142|KL|9365|klotho	NM_004795|KL|9365|klotho
hg18_v1_chr2_-_55131176_55131197	0.0752292	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr5_-_99898788_99898849	0.0751722	SOX2.p2	
hg18_v1_chr1_+_70459592_70459666	0.0751617	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr16_-_70474912_70474944	0.0750269	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr4_-_170428768_170428823	0.075006	SOX2.p2	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr11_-_85103438_85103438	0.0748674	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr3_+_180805266_180805309	0.0747683	SOX2.p2	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg18_v1_chr14_+_23590939_23591093	0.0747029	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg18_v1_chr7_+_73136085_73136098	0.0745679	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr7_+_63410620_63410620	0.0745337	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg18_v1_chr7_+_99537065_99537424	0.0744989	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR590642|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR611943|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR621800|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR595500|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR625474|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg18_v1_chr3_+_153469206_153469405	0.0744769	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr1_-_203985963_203985994	0.0744657	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr6_+_39868770_39868843	0.0744651	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg18_v1_chr18_+_71051713_71051753	0.0743979	SOX2.p2	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1
hg18_v1_chr1_+_46910086_46910193	0.0743182	SOX2.p2	BC067853|C1orf223|374973|chromosome 1 open reading frame 223	NM_001145474|C1orf223|374973|chromosome 1 open reading frame 223	BC057818|C1orf223|374973|chromosome 1 open reading frame 223	BC126318|C1orf223|374973|chromosome 1 open reading frame 223	BC144026|C1orf223|374973|chromosome 1 open reading frame 223	BC144027|C1orf223|374973|chromosome 1 open reading frame 223	FJ211596|C1orf223|374973|chromosome 1 open reading frame 223
hg18_v1_chr5_+_156628929_156628939	0.0742684	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr7_-_111633428_111633575	0.0741819	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr19_-_1062972_1063003	0.0741807	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg18_v1_chr2_-_179367925_179367967	0.0741739	SOX2.p2	X98114|TTN|7273|titin	X98115|TTN|7273|titin
hg18_v1_chr17_+_22982383_22982414	0.0741376	SOX2.p2	CR598297|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR604285|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr3_-_14963980_14964102	0.0740872	SOX2.p2	
hg18_v1_chr2_+_181553613_181553650	0.0740766	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr17_-_39619549_39619599	0.0740028	SOX2.p2	AK055685|C17orf65|339201|chromosome 17 open reading frame 65
hg18_v1_chr1_+_119712918_119713016	0.0739917	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr8_+_32623792_32623792	0.0739057	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr19_+_3523903_3523949	0.0738765	SOX2.p2	NM_006339|HMG20B|10362|high-mobility group 20B
hg18_v1_chr1_-_203985932_203985939	0.0736859	SOX2.p2	
hg18_v1_chr10_-_99042381_99042417	0.0736726	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 read-through transcript	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19	NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chr12_+_74071116_74071137	0.0736021	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr7_+_26208532_26208632	0.0735286	SOX2.p2	
hg18_v1_chr1_-_100416358_100416388	0.0734214	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg18_v1_chr7_+_143457083_143457138	0.073328	SOX2.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr5_-_134762695_134762732	0.0730516	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr11_+_113776504_113776578	0.0729739	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr5_+_140532385_140532600	0.0729584	SOX2.p2	AK315054|PCDHB7|56129|protocadherin beta 7	AK222560|PCDHB7|56129|protocadherin beta 7	AK024641|PCDHB7|56129|protocadherin beta 7	NM_018940|PCDHB7|56129|protocadherin beta 7	AK222678|PCDHB7|56129|protocadherin beta 7	BC098574|PCDHB7|56129|protocadherin beta 7	BC130331|PCDHB7|56129|protocadherin beta 7	BC130333|PCDHB7|56129|protocadherin beta 7	AF152500|PCDHB7|56129|protocadherin beta 7	AF217750|PCDHB7|56129|protocadherin beta 7
hg18_v1_chr6_+_26071255_26071398	0.072854	SOX2.p2	CR607808|TRIM38|10475|tripartite motif containing 38	CR936707|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr11_+_7229717_7229822	0.0728143	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg18_v1_chr17_-_74433048_74433096	0.0728061	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr10_-_63698463_63698627	0.0727093	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr15_+_63609895_63610058	0.0726649	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr3_-_10124763_10124914	0.0726265	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg18_v1_chr13_-_47775797_47775823	0.0726106	SOX2.p2	
hg18_v1_chr3_-_180805104_180805129	0.0725926	SOX2.p2	AY212270|MRPL47|57129|mitochondrial ribosomal protein L47	BC032522|MRPL47|57129|mitochondrial ribosomal protein L47	BC021575|MRPL47|57129|mitochondrial ribosomal protein L47	NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47	NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47
hg18_v1_chr2_+_201384880_201384887	0.0725421	SOX2.p2	CR624660|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr1_+_42773146_42773146	0.0725213	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr10_-_99042419_99042439	0.0724956	SOX2.p2	BX648194|ARHGAP19|84986|Rho GTPase activating protein 19
hg18_v1_chr6_+_27400518_27400556	0.0724758	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg18_v1_chr12_-_9913724_9913724	0.0721258	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr1_+_227506751_227506751	0.072125	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr6_+_35812836_35812836	0.0721193	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg18_v1_chr20_+_2892918_2892935	0.0719992	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr11_+_48194937_48194937	0.0719756	SOX2.p2	NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1
hg18_v1_chr8_-_72919241_72919284	0.0719336	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chr1_-_43628060_43628071	0.0718817	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg18_v1_chr6_+_139391511_139391550	0.0717	SOX2.p2	NM_021243|C6orf115|58527|chromosome 6 open reading frame 115	AF161398|C6orf115|58527|chromosome 6 open reading frame 115
hg18_v1_chr6_+_142510108_142510123	0.0716102	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr3_+_194793691_194793832	0.0715232	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr17_+_22982344_22982367	0.071393	SOX2.p2	AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR602208|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr14_+_56927014_56927058	0.0713895	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chrX_+_135407336_135407509	0.07122	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr19_+_977624_977625	0.0712017	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr2_+_228064531_228064539	0.0711196	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr2_+_181553333_181553608	0.0710761	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr3_+_195888701_195888883	0.0710663	SOX2.p2	BC039689|FAM43A|131583|family with sequence similarity 43, member A	AK074503|FAM43A|131583|family with sequence similarity 43, member A	CR611019|FAM43A|131583|family with sequence similarity 43, member A
hg18_v1_chr9_-_125070613_125070669	0.0707635	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr2_-_169455167_169455208	0.0707182	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	CR590224|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr11_-_129322510_129322726	0.0707012	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg18_v1_chr16_+_8714687_8714719	0.0706161	SOX2.p2	AK054834|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr3_+_184648089_184648153	0.0704886	SOX2.p2	CR603855|LOC100505687|100505687|hypothetical LOC100505687	AK057000|LOC100505687|100505687|hypothetical LOC100505687
hg18_v1_chr4_-_149582948_149583121	0.0703563	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr7_+_97679501_97679554	0.070323	SOX2.p2	BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15	BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15	NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15
hg18_v1_chr16_+_14201687_14201711	0.0701666	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr2_-_110231431_110231431	0.069888	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr9_-_94226380_94226656	0.0697676	SOX2.p2	AB000114|OMD|4958|osteomodulin	AK313055|OMD|4958|osteomodulin	AK225922|OMD|4958|osteomodulin	AY358872|OMD|4958|osteomodulin	BC046356|OMD|4958|osteomodulin	NM_005014|OMD|4958|osteomodulin
hg18_v1_chr9_+_108665168_108665202	0.0696842	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg18_v1_chr5_-_142057692_142057818	0.0696833	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr7_+_5598979_5599093	0.0696198	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr14_-_52689680_52689756	0.0695616	SOX2.p2	DQ315474|DDHD1|80821|DDHD domain containing 1	GU376468|DDHD1|80821|DDHD domain containing 1	BC030703|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr5_-_176258920_176258938	0.0694293	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg18_v1_chrX_-_117134652_117134855	0.0693677	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr8_-_78075834_78075834	0.0691125	SOX2.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr21_+_46094301_46094331	0.0690594	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chr14_+_76362467_76362629	0.0690277	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg18_v1_chr3_-_194579207_194579325	0.0690187	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr12_-_69434650_69434805	0.068927	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr3_-_187138527_187138617	0.0688269	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr1_-_159282376_159282407	0.0686736	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg18_v1_chr10_-_32675848_32676089	0.0686538	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr1_+_181871830_181872100	0.0686182	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr5_+_140146059_140146059	0.0685942	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg18_v1_chr9_-_135334003_135334096	0.0685479	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg18_v1_chr3_+_19963534_19963853	0.0684878	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr10_-_44775142_44775164	0.0682716	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr14_+_64948332_64948414	0.0682628	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chrX_+_72140076_72140206	0.0681597	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg18_v1_chr18_-_31178415_31178423	0.0679028	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg18_v1_chr12_-_47790604_47790780	0.0678546	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	CR625783|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg18_v1_chr6_-_132980901_132980924	0.0677826	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr10_-_25281510_25281567	0.0676939	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	CR615591|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg18_v1_chr20_-_1548589_1548688	0.0672613	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg18_v1_chr5_+_176492629_176492643	0.0672503	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr11_+_10836339_10836385	0.0672199	SOX2.p2	BC014360|LOC729013|729013|hypothetical LOC729013	BC036635|LOC729013|729013|hypothetical LOC729013
hg18_v1_chr19_+_54883732_54883753	0.0671861	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr2_+_201384889_201384893	0.0671848	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr4_-_168392266_168392292	0.0671152	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chrX_-_99778340_99778503	0.067066	SOX2.p2	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr2_-_55131157_55131175	0.0669354	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr3_-_195835593_195835712	0.0669131	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr1_-_159282312_159282370	0.06686	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg18_v1_chr8_+_63323739_63323781	0.0667198	SOX2.p2	AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr1_-_233558117_233558154	0.0666327	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr10_-_29794484_29794630	0.0665229	SOX2.p2	BX648589|SVIL|6840|supervillin
hg18_v1_chr17_-_26665220_26665255	0.0664977	SOX2.p2	CR616854|EVI2B|2124|ecotropic viral integration site 2B	AK297087|EVI2B|2124|ecotropic viral integration site 2B	NM_006495|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr12_+_54132264_54132264	0.0664243	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr11_-_64403712_64403762	0.0663869	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chr15_-_88148538_88148610	0.0663587	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr11_-_5232480_5232620	0.0663321	SOX2.p2	AF110493|HBG2|3048|hemoglobin, gamma G	X55656|HBG2|3048|hemoglobin, gamma G	DQ892665|HBG1|3047|hemoglobin, gamma A	DQ892801|HBG1|3047|hemoglobin, gamma A	DQ895909|HBG2|3048|hemoglobin, gamma G	DQ896048|HBG1|3047|hemoglobin, gamma A	M15386|HBG2|3048|hemoglobin, gamma G	CR596479|HBG1|3047|hemoglobin, gamma A	CR602897|HBG2|3048|hemoglobin, gamma G	CR599317|HBG2|3048|hemoglobin, gamma G	CR594576|HBG2|3048|hemoglobin, gamma G	CR593826|HBG2|3048|hemoglobin, gamma G	CR594720|HBG1|3047|hemoglobin, gamma A	CR603041|HBG2|3048|hemoglobin, gamma G	CR609411|HBG1|3047|hemoglobin, gamma A	CR613701|HBG2|3048|hemoglobin, gamma G	CR620360|HBG1|3047|hemoglobin, gamma A	CR593382|HBG1|3047|hemoglobin, gamma A	CR607395|HBG2|3048|hemoglobin, gamma G	CR608786|HBG1|3047|hemoglobin, gamma A	CR610392|HBG2|3048|hemoglobin, gamma G	CR615907|HBG2|3048|hemoglobin, gamma G	CR619879|HBG1|3047|hemoglobin, gamma A	CR626466|HBG1|3047|hemoglobin, gamma A	CR595029|HBG2|3048|hemoglobin, gamma G	CR604256|HBG1|3047|hemoglobin, gamma A	CR593022|HBG2|3048|hemoglobin, gamma G	CR593470|HBG2|3048|hemoglobin, gamma G	CR595535|HBG2|3048|hemoglobin, gamma G	CR602719|HBG2|3048|hemoglobin, gamma G	CR604223|HBG2|3048|hemoglobin, gamma G	CR609361|HBG2|3048|hemoglobin, gamma G	CR613883|HBG2|3048|hemoglobin, gamma G	CR614139|HBG1|3047|hemoglobin, gamma A	CR619706|HBG1|3047|hemoglobin, gamma A	CR619938|HBG1|3047|hemoglobin, gamma A	CR622267|HBG1|3047|hemoglobin, gamma A	CR625875|HBG1|3047|hemoglobin, gamma A	CR626236|HBG1|3047|hemoglobin, gamma A	CR626417|HBG1|3047|hemoglobin, gamma A	CR621032|HBG1|3047|hemoglobin, gamma A	CR593357|HBG2|3048|hemoglobin, gamma G	BC130457|HBG2|3048|hemoglobin, gamma G	BC130459|HBG2|3048|hemoglobin, gamma G	AK290492|HBG2|3048|hemoglobin, gamma G	BC010914|HBG1|3047|hemoglobin, gamma A	BC020719|HBG1|3047|hemoglobin, gamma A	NM_000184|HBG2|3048|hemoglobin, gamma G	BC029387|HBG2|3048|hemoglobin, gamma G	CR608640|HBG1|3047|hemoglobin, gamma A
hg18_v1_chr4_+_113778060_113778174	0.0661703	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr12_+_52132151_52132153	0.0661014	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr1_+_159435728_159435728	0.0660998	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg18_v1_chr22_-_30071565_30071686	0.066011	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr12_+_27288344_27288438	0.0659266	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr4_-_2233504_2233596	0.0659233	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr4_+_140806371_140806509	0.0657614	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr4_+_78172966_78173092	0.0657594	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr11_+_10439253_10439262	0.0657562	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg18_v1_chr16_+_4842077_4842216	0.0654969	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr8_-_17986584_17986632	0.0652467	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr11_-_118571793_118571793	0.0652227	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg18_v1_chr2_-_100088224_100088476	0.0652221	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr7_+_73136042_73136082	0.0652145	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr3_+_180763440_180763575	0.0651757	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	CR621230|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg18_v1_chr13_-_47885653_47885653	0.0651692	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg18_v1_chr1_+_157824239_157824335	0.0650529	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr8_+_69027166_69027208	0.0649809	SOX2.p2	AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr8_-_27525084_27525184	0.0649138	SOX2.p2	CR591665|CLU|1191|clusterin	NM_001171138|CLU|1191|clusterin
hg18_v1_chr14_-_59166976_59167061	0.0648248	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1	CR591662|RTN1|6252|reticulon 1
hg18_v1_chr21_+_37713076_37713076	0.0647083	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr5_+_65258139_65258193	0.0646416	SOX2.p2	AF263744|ERBB2IP|55914|erbb2 interacting protein	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr1_-_159435440_159435470	0.0645518	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg18_v1_chr4_-_83569572_83569642	0.0645346	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr8_+_145136226_145136304	0.0645211	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr4_-_164754106_164754225	0.0644643	SOX2.p2	CR607777|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr14_+_57964148_57964200	0.0643968	SOX2.p2	
hg18_v1_chr4_+_76868763_76868814	0.0643713	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr1_-_181654124_181654359	0.0643593	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg18_v1_chr17_-_3518568_3518627	0.0643502	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR607043|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR619400|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606577|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR609956|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR591740|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR601638|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR602958|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606404|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr13_+_33290254_33290315	0.0642878	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr6_+_30702586_30702758	0.0641731	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	CR599754|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	CR602660|ATAT1|79969|alpha tubulin acetyltransferase 1	CR619757|ATAT1|79969|alpha tubulin acetyltransferase 1	CR594590|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	CR615059|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg18_v1_chr11_-_63292688_63292857	0.0640783	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chrX_-_151911260_151911416	0.0640745	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg18_v1_chrX_-_13866366_13866425	0.0640375	SOX2.p2	
hg18_v1_chrX_+_135406903_135407064	0.0640254	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr11_+_62813947_62814005	0.063866	SOX2.p2	AK298430|SLC22A10|387775|solute carrier family 22, member 10	AB075876|SLC22A10|387775|solute carrier family 22, member 10	NM_001039752|SLC22A10|387775|solute carrier family 22, member 10
hg18_v1_chr17_-_26665213_26665218	0.0638389	SOX2.p2	BC005926|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr17_-_39619601_39619633	0.0636425	SOX2.p2	NM_178542|C17orf65|339201|chromosome 17 open reading frame 65
hg18_v1_chr19_-_2901583_2901642	0.0636328	SOX2.p2	
hg18_v1_chr6_-_33879734_33879770	0.0635374	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr19_+_46561688_46561710	0.0634527	SOX2.p2	NM_001098825|TMEM91|641649|transmembrane protein 91
hg18_v1_chr15_-_63069146_63069229	0.063385	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR592296|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR605959|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR593134|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR613754|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr3_-_161650294_161650341	0.0632908	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg18_v1_chr12_-_49763566_49763715	0.0632322	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr1_-_42549347_42549350	0.0631613	SOX2.p2	
hg18_v1_chrX_+_152684150_152684160	0.0631073	SOX2.p2	AK295849|PLXNB3|5365|plexin B3	AK295762|PLXNB3|5365|plexin B3
hg18_v1_chr12_+_27288446_27288462	0.0628678	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr5_-_172688024_172688074	0.0628372	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg18_v1_chr19_-_12456544_12456605	0.0628024	SOX2.p2	BC136746|ZNF709|163051|zinc finger protein 709	BC136751|ZNF709|163051|zinc finger protein 709	AK290911|ZNF709|163051|zinc finger protein 709	BC036481|ZNF709|163051|zinc finger protein 709
hg18_v1_chr12_-_56159631_56159692	0.0627965	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr7_-_157054403_157054504	0.0627365	SOX2.p2	CR590102|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR596761|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR604034|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg18_v1_chr2_+_3605611_3605640	0.0626544	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg18_v1_chrX_+_119621771_119621862	0.062591	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr5_+_72179685_72179709	0.0625613	SOX2.p2	NM_153188|TNPO1|3842|transportin 1
hg18_v1_chr4_+_155921876_155921949	0.062461	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg18_v1_chr20_-_4752067_4752321	0.0624437	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr19_+_54530546_54530609	0.0623452	SOX2.p2	X14046|CD37|951|CD37 molecule	CR612129|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg18_v1_chr12_-_55040123_55040178	0.06232	SOX2.p2	BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr21_-_30893063_30893091	0.0622491	SOX2.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr8_+_17986647_17986656	0.0621052	SOX2.p2	
hg18_v1_chr12_-_56159895_56159899	0.0620756	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr5_+_170779264_170779271	0.062065	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg18_v1_chr12_+_97433541_97433544	0.0620514	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg18_v1_chr20_-_45360903_45361050	0.0619447	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr17_-_60988077_60988206	0.0619431	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg18_v1_chr1_+_224317044_224317055	0.061942	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr12_+_63090008_63090082	0.0619267	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr19_+_21116666_21116727	0.0618964	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg18_v1_chr2_+_201384842_201384877	0.0618688	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr5_+_172000793_172000924	0.0617392	SOX2.p2	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg18_v1_chr8_+_104900591_104900911	0.0616319	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr9_+_102231616_102231616	0.0616283	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg18_v1_chr1_-_211087570_211087613	0.0615602	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg18_v1_chr11_-_65382313_65382379	0.0615198	SOX2.p2	CR617396|CFL1|1072|cofilin 1 (non-muscle)	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg18_v1_chr12_+_54106304_54106304	0.0614194	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chr4_-_54625528_54625581	0.0613692	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	CR611915|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr17_-_30724732_30724832	0.0613271	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr17_-_3518628_3518643	0.0612108	SOX2.p2	CR595900|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR615413|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr3_-_57301749_57301749	0.0611796	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr6_-_33016561_33016824	0.0611532	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr6_+_100161370_100161370	0.0608784	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg18_v1_chr11_+_186760_186794	0.0607133	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg18_v1_chr2_+_148318520_148318654	0.0606773	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr1_+_240078655_240078762	0.0606114	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr9_+_80134302_80134349	0.0606053	SOX2.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr9_-_4731049_4731068	0.0605862	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg18_v1_chr13_+_47775901_47775944	0.0603811	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr19_-_55124764_55124866	0.0603255	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr4_-_17415918_17416015	0.0603183	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr14_-_80757018_80757048	0.0602965	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg18_v1_chr8_+_133948384_133948427	0.0601479	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg18_v1_chr17_+_22982278_22982312	0.0595999	SOX2.p2	CR614567|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr8_-_38577891_38577956	0.0595932	SOX2.p2	
hg18_v1_chr13_+_110565587_110565874	0.0595789	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr17_-_30414789_30414871	0.0594891	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr1_+_36046373_36046442	0.059476	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr1_-_203985752_203985779	0.0592739	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr4_-_95482994_95483049	0.0592558	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr14_-_20642629_20642702	0.0591546	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg18_v1_chr2_+_219354948_219355323	0.0591132	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR623283|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR590744|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr15_-_32289480_32289554	0.0589797	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr11_-_5279750_5279751	0.0588261	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr6_+_151228577_151228651	0.058775	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr7_-_120285364_120285428	0.0587354	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr1_-_43628035_43628041	0.0587219	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg18_v1_chr17_-_1478859_1478929	0.0586177	SOX2.p2	BC027923|SLC43A2|124935|solute carrier family 43, member 2	NM_152346|SLC43A2|124935|solute carrier family 43, member 2	BC071859|SLC43A2|124935|solute carrier family 43, member 2
hg18_v1_chr18_+_647461_647632	0.058602	SOX2.p2	CR601528|TYMS|7298|thymidylate synthetase	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg18_v1_chr16_-_1772572_1772576	0.0585259	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr12_-_69434330_69434503	0.0585065	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr8_-_72918938_72919048	0.0584571	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg18_v1_chr18_-_31178379_31178414	0.0584224	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg18_v1_chr8_-_121893196_121893292	0.0583221	SOX2.p2	
hg18_v1_chr5_+_85949518_85949628	0.0582082	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ891355|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ894536|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr12_-_61283474_61283480	0.0581297	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg18_v1_chr11_+_69165159_69165262	0.0580798	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg18_v1_chr1_+_149493833_149493858	0.057984	SOX2.p2	CR622014|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr6_-_33864876_33864881	0.0579388	SOX2.p2	CR606517|LEMD2|221496|LEM domain containing 2
hg18_v1_chr5_-_134762738_134762758	0.0578828	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr3_-_47798308_47798336	0.0578095	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr16_-_8870343_8870379	0.0578045	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg18_v1_chr17_+_72880831_72880866	0.057782	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg18_v1_chr5_+_177368294_177368294	0.0575336	SOX2.p2	NM_001079527|FAM153C|653316|family with sequence similarity 153, member C
hg18_v1_chr10_-_127559841_127559873	0.0575002	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg18_v1_chr9_-_35818728_35818743	0.0574029	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg18_v1_chr22_-_30072329_30072340	0.0573434	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr6_-_80001116_80001173	0.0572731	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR604353|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr10_+_69314714_69314882	0.0572499	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chr21_+_37496616_37496639	0.0572306	SOX2.p2	CR593065|TTC3|7267|tetratricopeptide repeat domain 3
hg18_v1_chr4_-_145281237_145281353	0.0572297	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	CR619929|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg18_v1_chr4_-_122304925_122304925	0.0572072	SOX2.p2	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3	AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3	AK290409|TNIP3|79931|TNFAIP3 interacting protein 3	BC128408|TNIP3|79931|TNFAIP3 interacting protein 3	EF585496|TNIP3|79931|TNFAIP3 interacting protein 3	NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3
hg18_v1_chr3_-_188339882_188340018	0.0572034	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like	CR603001|RPL39L|116832|ribosomal protein L39-like
hg18_v1_chr17_+_78630793_78630870	0.057201	SOX2.p2	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like	NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like
hg18_v1_chr13_-_44048601_44048700	0.0571992	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr6_+_17390273_17390273	0.0571883	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr19_-_4293718_4293782	0.057065	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg18_v1_chr6_+_151228383_151228544	0.0570454	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr16_-_1772577_1772609	0.0568641	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr19_+_46286207_46286216	0.056847	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg18_v1_chr19_+_13767207_13767284	0.0567514	SOX2.p2	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4	NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4
hg18_v1_chr8_-_30060003_30060027	0.0567215	SOX2.p2	CR597672|TMEM66|51669|transmembrane protein 66	CR608849|TMEM66|51669|transmembrane protein 66	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg18_v1_chr2_+_27652892_27652896	0.0567205	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr9_-_74169649_74170191	0.0566123	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr10_-_102035938_102036103	0.0565854	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg18_v1_chr17_+_72880967_72881074	0.0565311	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr4_-_185921384_185921392	0.0563136	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr8_+_85258007_85258021	0.056252	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr6_-_27548438_27548923	0.0560785	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg18_v1_chr13_+_109935250_109935280	0.0559665	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg18_v1_chr11_+_58980986_58981009	0.0559599	SOX2.p2	BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6
hg18_v1_chr6_-_99957253_99957290	0.0559213	SOX2.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr22_+_38627129_38627258	0.0558725	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chrX_+_119621933_119622010	0.0557911	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr2_-_160838397_160838474	0.0557619	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr2_+_10180304_10180376	0.0557026	SOX2.p2	CR596700|RRM2|6241|ribonucleotide reductase M2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	CR604378|RRM2|6241|ribonucleotide reductase M2	CR625489|RRM2|6241|ribonucleotide reductase M2	CR602150|RRM2|6241|ribonucleotide reductase M2	CR609838|RRM2|6241|ribonucleotide reductase M2	CR621427|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	CR614990|RRM2|6241|ribonucleotide reductase M2	CR590959|RRM2|6241|ribonucleotide reductase M2	CR618451|RRM2|6241|ribonucleotide reductase M2	CR603461|RRM2|6241|ribonucleotide reductase M2	CR602054|RRM2|6241|ribonucleotide reductase M2	CR608076|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr3_-_52287603_52287694	0.0555838	SOX2.p2	CR612750|WDR82|80335|WD repeat domain 82	CR616060|WDR82|80335|WD repeat domain 82
hg18_v1_chr14_-_34414603_34414603	0.0555673	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr8_+_7789608_7789621	0.0555414	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg18_v1_chr2_+_208284691_208284800	0.0554547	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr4_+_78298326_78298709	0.0554237	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr1_+_22650930_22650933	0.0553707	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr14_-_75517198_75517250	0.0553108	SOX2.p2	AK313564|TGFB3|7043|transforming growth factor, beta 3	X14149|TGFB3|7043|transforming growth factor, beta 3	J03241|TGFB3|7043|transforming growth factor, beta 3
hg18_v1_chr19_-_48815572_48815607	0.0552308	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg18_v1_chr1_+_74473672_74473693	0.0549722	SOX2.p2	AF116826|TNNI3K|51086|TNNI3 interacting kinase	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase
hg18_v1_chr1_+_172683834_172683872	0.0548856	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr19_+_977608_977612	0.0547449	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg18_v1_chr3_-_187138500_187138518	0.0547241	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr19_+_977271_977327	0.0546684	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg18_v1_chr7_+_55947824_55947861	0.0546525	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr9_-_125070675_125070744	0.0546031	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr17_-_71023221_71023248	0.0545967	SOX2.p2	BC066643|CASKIN2|57513|CASK interacting protein 2	NM_020753|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr1_+_224317062_224317110	0.0544262	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr12_-_10953427_10953427	0.0543671	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr15_-_57013092_57013155	0.054337	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr16_+_2503915_2503977	0.0541651	SOX2.p2	CR592409|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599309|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR622720|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR608280|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR592150|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr4_+_175441619_175441757	0.0541587	SOX2.p2	NM_001145314|KIAA1712|80817|KIAA1712	BC038667|KIAA1712|80817|KIAA1712	AB051499|KIAA1712|80817|KIAA1712	AK094961|KIAA1712|80817|KIAA1712	AK292484|KIAA1712|80817|KIAA1712
hg18_v1_chr10_-_13429397_13429798	0.0540176	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr4_+_76868830_76868849	0.0539091	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr1_-_108588186_108588225	0.0537222	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg18_v1_chr22_+_42908102_42908189	0.0536873	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg18_v1_chr1_+_150937463_150937463	0.0535786	SOX2.p2	BC119707|LCE2A|353139|late cornified envelope 2A	BC127647|LCE2A|353139|late cornified envelope 2A	NM_178428|LCE2A|353139|late cornified envelope 2A
hg18_v1_chr6_+_16251260_16251318	0.0535294	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chrX_+_119622570_119622611	0.0535145	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr3_+_185515543_185515977	0.0534705	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr13_+_107753764_107753872	0.0534162	SOX2.p2	
hg18_v1_chr12_-_9976173_9976246	0.0532819	SOX2.p2	EU095393|CLEC2A|387836|C-type lectin domain family 2, member A	EU095394|CLEC2A|387836|C-type lectin domain family 2, member A	AY359126|CLEC2A|387836|C-type lectin domain family 2, member A	EF127467|CLEC2A|387836|C-type lectin domain family 2, member A	NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A
hg18_v1_chr7_+_87401368_87401670	0.053271	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr10_-_61819493_61819493	0.053224	SOX2.p2	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr11_-_118166797_118166889	0.0532021	SOX2.p2	BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr1_-_20986345_20986383	0.0531263	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3	CR599334|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr1_+_39647762_39647762	0.0530547	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chr8_-_145809695_145809695	0.0530401	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg18_v1_chr10_+_121400881_121400925	0.0530213	SOX2.p2	AK222800|BAG3|9531|BCL2-associated athanogene 3	BC006418|BAG3|9531|BCL2-associated athanogene 3	AF127139|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr11_+_125730822_125730878	0.0529743	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr11_+_36572615_36572746	0.0529574	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr3_+_157071141_157071157	0.0529411	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr1_+_26973804_26973947	0.0528346	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr2_+_1397186_1397187	0.0527881	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg18_v1_chr13_+_97593469_97593505	0.0527739	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr1_+_149493812_149493830	0.0526977	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr18_+_647674_647748	0.0526815	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	CR608281|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	CR617715|TYMS|7298|thymidylate synthetase	CR607878|TYMS|7298|thymidylate synthetase	CR600251|TYMS|7298|thymidylate synthetase	CR607354|TYMS|7298|thymidylate synthetase	CR612332|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	CR617359|TYMS|7298|thymidylate synthetase	CR595729|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg18_v1_chr17_-_24426752_24426752	0.0526057	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg18_v1_chr17_-_45621571_45621615	0.0526036	SOX2.p2	J00112|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr17_+_52688842_52689102	0.0525833	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr10_+_90474280_90474280	0.0525697	SOX2.p2	EF426482|LIPK|643414|lipase, family member K	NM_001080518|LIPK|643414|lipase, family member K
hg18_v1_chr5_+_138706029_138706097	0.0524861	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr20_+_9406460_9406567	0.0524695	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr15_-_54997964_54998093	0.0523525	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr9_-_5958367_5958450	0.0522842	SOX2.p2	
hg18_v1_chr12_-_120725210_120725271	0.0522419	SOX2.p2	CR611200|LOC338799|338799|hypothetical LOC338799
hg18_v1_chr17_-_44026042_44026157	0.0521288	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg18_v1_chr11_-_101292462_101292462	0.0520776	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg18_v1_chr3_+_184898234_184898398	0.0520674	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chrX_-_73751155_73751173	0.0520008	SOX2.p2	AK001334|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chrX_-_134013644_134013946	0.0519245	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	CR601523|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg18_v1_chr8_+_144838608_144838649	0.051918	SOX2.p2	NM_001100598|ZNF707|286075|zinc finger protein 707	NM_001100599|ZNF707|286075|zinc finger protein 707	NM_173831|ZNF707|286075|zinc finger protein 707	AK001126|ZNF707|286075|zinc finger protein 707	AK290432|ZNF707|286075|zinc finger protein 707	AK055198|ZNF707|286075|zinc finger protein 707	AK055263|ZNF707|286075|zinc finger protein 707	BC014894|ZNF707|286075|zinc finger protein 707
hg18_v1_chr12_+_109424387_109424530	0.0518179	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg18_v1_chr6_-_83960351_83960412	0.051758	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr4_+_71298187_71298281	0.0516865	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg18_v1_chr2_+_79201118_79201139	0.0515543	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr4_+_76868850_76869027	0.0514317	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr1_-_20986385_20986428	0.0513775	SOX2.p2	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr8_-_95556460_95556531	0.0513114	SOX2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr4_+_78651929_78651930	0.051242	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg18_v1_chr14_+_23710924_23710941	0.0511934	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg18_v1_chr1_+_67404756_67404756	0.0510438	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg18_v1_chrX_+_65300803_65300931	0.0509547	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chr19_-_60941551_60941579	0.0509134	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr1_-_203985780_203985850	0.0507734	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr11_+_69165119_69165143	0.0507531	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg18_v1_chr5_+_137701855_137701909	0.0506972	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr11_+_69165065_69165118	0.0506521	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg18_v1_chr4_+_158361185_158361484	0.0506482	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg18_v1_chr7_+_94130673_94130691	0.0505484	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr4_-_170428681_170428684	0.0505223	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr6_+_26070957_26071068	0.0502575	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr11_-_61340804_61340951	0.0501257	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	CR611884|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	CR597486|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr1_-_25619863_25619991	0.05005	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF312679|RHD|6007|Rh blood group, D antigen	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg18_v1_chr19_-_12456625_12456632	0.0500277	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg18_v1_chr17_-_37590910_37590995	0.0499937	SOX2.p2	AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor	NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor
hg18_v1_chr2_+_143603368_143603433	0.0499667	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr12_+_26096757_26096763	0.0499357	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr5_-_180099663_180099704	0.0497947	SOX2.p2	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1	BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1
hg18_v1_chr19_+_977601_977605	0.0497251	SOX2.p2	CR592088|CNN2|1265|calponin 2	CR602855|CNN2|1265|calponin 2	CR607371|CNN2|1265|calponin 2
hg18_v1_chr2_-_128332143_128332160	0.0496963	SOX2.p2	CR597179|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr6_-_108386013_108386040	0.0495876	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr15_+_38673509_38673525	0.0495375	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr2_-_70166903_70166922	0.0495176	SOX2.p2	AK056822|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr12_+_95112385_95112412	0.0495109	SOX2.p2	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr17_-_3993047_3993072	0.0493923	SOX2.p2	AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr1_-_84237316_84237453	0.0493368	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr1_-_245237952_245237957	0.0492491	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr1_-_151873191_151873191	0.0492171	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg18_v1_chr15_-_42790805_42790871	0.0492117	SOX2.p2	
hg18_v1_chr4_+_53975597_53975627	0.04912	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr5_-_136862786_136862973	0.0491068	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg18_v1_chr5_+_137701601_137701713	0.049103	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr19_-_45416043_45416106	0.0491006	SOX2.p2	CR617938|TTC9B|148014|tetratricopeptide repeat domain 9B
hg18_v1_chr6_-_52882419_52882454	0.049074	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	CR601508|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg18_v1_chr10_+_35934343_35934343	0.0490586	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg18_v1_chr3_+_173240126_173240131	0.0490577	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr7_+_107008439_107008453	0.0490473	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr8_+_63324053_63324184	0.0487639	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr1_+_109057078_109057078	0.0485318	SOX2.p2	NM_001144937|FNDC7|163479|fibronectin type III domain containing 7
hg18_v1_chr7_-_99537362_99537502	0.0485075	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr12_-_8656705_8656722	0.0484163	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr3_-_48204332_48204532	0.0484161	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg18_v1_chr12_-_31368347_31368362	0.0483504	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr5_+_121675284_121675339	0.0483095	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr1_-_245561753_245561836	0.048304	SOX2.p2	CR610381|ZNF496|84838|zinc finger protein 496
hg18_v1_chr14_-_22515725_22515826	0.0482294	SOX2.p2	AK025567|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr12_-_116983276_116983360	0.0482161	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg18_v1_chr14_+_68796433_68796433	0.0481428	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg18_v1_chr14_-_60185659_60186027	0.0481404	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg18_v1_chr20_-_23755297_23755367	0.048097	SOX2.p2	NM_001322|CST2|1470|cystatin SA	BC062679|CST2|1470|cystatin SA
hg18_v1_chrX_-_73751135_73751149	0.0478209	SOX2.p2	AF155109|RLIM|51132|ring finger protein, LIM domain interacting	BC013357|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr12_+_108020305_108020514	0.0477963	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr3_+_9748494_9748603	0.0477909	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr2_+_169465995_169466046	0.0476802	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg18_v1_chr13_+_47775888_47775897	0.0476223	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chr2_+_208284610_208284670	0.0476161	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr14_+_19993181_19993195	0.0473806	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr18_-_71049977_71050001	0.0473735	SOX2.p2	
hg18_v1_chr3_+_47819631_47819689	0.0473504	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr4_+_100704262_100704262	0.0472827	SOX2.p2	AK302602|MTTP|4547|microsomal triglyceride transfer protein	NM_000253|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr4_+_47403107_47403116	0.0472723	SOX2.p2	
hg18_v1_chr8_+_85258056_85258140	0.0471824	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr2_+_39746141_39746141	0.0471817	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr19_+_63053031_63053218	0.0471466	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg18_v1_chr11_-_33714448_33714600	0.0471375	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr5_+_180399871_180399971	0.0471302	SOX2.p2	AK298113|BTNL9|153579|butyrophilin-like 9	BC062459|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr11_-_48330574_48330574	0.047125	SOX2.p2	NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45
hg18_v1_chr22_+_19239221_19239393	0.0471152	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr1_+_151873134_151873170	0.0471033	SOX2.p2	AF261137|C1orf77|26097|chromosome 1 open reading frame 77	NM_015607|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr7_-_8268292_8268341	0.0471008	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr1_-_183392442_183392739	0.0468467	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr2_+_39746525_39746618	0.046805	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr6_-_80001043_80001111	0.0467676	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR599808|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr11_+_129484540_129484559	0.0467631	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr18_-_52456837_52456988	0.0465957	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr10_+_104603956_104604026	0.0465803	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr4_+_169250281_169250426	0.0465436	SOX2.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chr6_-_29120930_29120995	0.0464971	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr15_+_65904994_65904994	0.0464788	SOX2.p2	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1
hg18_v1_chr5_-_137116746_137116859	0.0464558	SOX2.p2	CR625349|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	CR622742|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg18_v1_chr14_+_19993129_19993165	0.0463442	SOX2.p2	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr5_+_53849251_53849353	0.0462985	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg18_v1_chrX_+_119622012_119622119	0.0461933	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr12_-_7487989_7488019	0.0461906	SOX2.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg18_v1_chr16_+_56230707_56230930	0.0461546	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr10_-_95452301_95452350	0.0461141	SOX2.p2	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR621041|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR625507|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg18_v1_chr2_-_210743622_210743708	0.0461095	SOX2.p2	AK124963|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr11_-_74914066_74914246	0.0460383	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chr9_-_36390212_36390295	0.0460381	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr13_+_21143083_21143214	0.0458976	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr1_-_230945065_230945095	0.0458723	SOX2.p2	
hg18_v1_chr8_-_81949570_81949570	0.0458165	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr12_+_48443588_48443627	0.0457654	SOX2.p2	CR602155|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	CR611691|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr6_+_12825818_12825911	0.0457273	SOX2.p2	AK090769|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	AB051520|PHACTR1|221692|phosphatase and actin regulator 1	BC101526|PHACTR1|221692|phosphatase and actin regulator 1	BC101528|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr3_+_14835472_14835472	0.0457064	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg18_v1_chr1_+_243199690_243199793	0.0456931	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr7_-_135263737_135263901	0.0456619	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6	CR625657|MTPN|136319|myotrophin	CR611568|MTPN|136319|myotrophin	CR599361|MTPN|136319|myotrophin
hg18_v1_chr8_-_30060029_30060200	0.045634	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	CR625035|TMEM66|51669|transmembrane protein 66	CR604656|TMEM66|51669|transmembrane protein 66	CR592958|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	CR609979|TMEM66|51669|transmembrane protein 66	CR610452|TMEM66|51669|transmembrane protein 66	CR603787|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	CR607306|TMEM66|51669|transmembrane protein 66	CR622883|TMEM66|51669|transmembrane protein 66	CR604748|TMEM66|51669|transmembrane protein 66	CR612155|TMEM66|51669|transmembrane protein 66	CR615477|TMEM66|51669|transmembrane protein 66	CR596584|TMEM66|51669|transmembrane protein 66	CR603460|TMEM66|51669|transmembrane protein 66	CR622782|TMEM66|51669|transmembrane protein 66	CR616524|TMEM66|51669|transmembrane protein 66	CR592722|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	CR613232|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	CR605556|TMEM66|51669|transmembrane protein 66	CR609363|TMEM66|51669|transmembrane protein 66	CR613264|TMEM66|51669|transmembrane protein 66	CR622956|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	CR608346|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg18_v1_chr14_+_59782222_59782227	0.0455132	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr7_-_64088848_64088848	0.0454956	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chr19_-_41601303_41601419	0.045481	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg18_v1_chr5_+_137701852_137701854	0.045476	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chrX_+_77052834_77052864	0.0454247	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr7_-_75794919_75795084	0.0452305	SOX2.p2	CR598331|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
hg18_v1_chr14_+_64040979_64041044	0.0451916	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr7_+_77307382_77307508	0.0451513	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr11_-_780065_780091	0.0450002	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr5_-_134762764_134762783	0.0449332	SOX2.p2	CR624606|H2AFY|9555|H2A histone family, member Y	CR607311|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr18_+_647666_647673	0.0448636	SOX2.p2	CR616172|TYMS|7298|thymidylate synthetase	CR601110|TYMS|7298|thymidylate synthetase
hg18_v1_chr4_-_149582754_149582825	0.0448588	SOX2.p2	BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr2_+_1396239_1396285	0.0448437	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg18_v1_chr2_-_128332161_128332174	0.0448418	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr15_+_64372876_64373031	0.0448102	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr15_-_29070909_29071210	0.0447907	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr12_-_109424260_109424327	0.0447401	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr3_-_47798337_47798339	0.0446848	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr3_-_95264756_95264756	0.0445956	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr1_-_210070736_210070771	0.0445812	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr12_+_77963563_77963602	0.0445542	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr13_+_30672122_30672298	0.0444813	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr1_+_165564904_165564941	0.0444664	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr4_-_5940893_5940901	0.0444012	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr10_+_35456095_35456188	0.0443924	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_+_109043711_109043726	0.0443766	SOX2.p2	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr3_+_157071117_157071139	0.044356	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr8_-_17986690_17986787	0.0443224	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr18_+_41448763_41448763	0.0443192	SOX2.p2	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2
hg18_v1_chr19_-_48815853_48815853	0.0442967	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg18_v1_chr5_-_178984192_178984275	0.0442257	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chrX_-_74659982_74660000	0.0440977	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr2_-_55131202_55131237	0.0440525	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chrX_+_106048245_106048245	0.0440218	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg18_v1_chr3_-_48729593_48729714	0.0440038	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	CR591987|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	CR607564|IP6K2|51447|inositol hexakisphosphate kinase 2	CR624222|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	CR618536|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	CR595634|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg18_v1_chr5_-_147191334_147191392	0.0439797	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr12_+_99185334_99185679	0.0437795	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr17_-_34603577_34603661	0.0437292	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr10_+_90414125_90414195	0.0437052	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr8_+_23160098_23160277	0.0436561	SOX2.p2	AK092500|CHMP7|91782|CHMP family, member 7	AL833843|CHMP7|91782|CHMP family, member 7	BC019110|CHMP7|91782|CHMP family, member 7	AK296592|CHMP7|91782|CHMP family, member 7	BC004344|CHMP7|91782|CHMP family, member 7
hg18_v1_chr19_+_45948598_45948688	0.0436532	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597793|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR606390|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597355|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR602490|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR607723|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611065|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620163|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614230|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr6_-_50124322_50124322	0.0435317	SOX2.p2	DQ012016|DEFB112|245915|defensin, beta 112	NM_001037498|DEFB112|245915|defensin, beta 112
hg18_v1_chr19_+_57531309_57531422	0.0434418	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg18_v1_chr17_+_26060617_26060782	0.0433721	SOX2.p2	
hg18_v1_chr5_+_180399830_180399856	0.0433556	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr10_+_91488704_91488791	0.0433181	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr3_+_157875063_157875129	0.0433114	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr4_+_154293719_154293719	0.0432206	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr10_+_121400926_121400927	0.0432185	SOX2.p2	AK313026|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr1_-_114215768_114215897	0.0431866	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chrX_+_128501862_128502097	0.0431838	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr1_-_156923111_156923129	0.0431565	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chr8_+_23160065_23160095	0.0430604	SOX2.p2	AK315664|CHMP7|91782|CHMP family, member 7	AK021776|CHMP7|91782|CHMP family, member 7	CR606249|CHMP7|91782|CHMP family, member 7
hg18_v1_chr11_-_70350292_70350362	0.0430548	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr1_+_12108542_12108664	0.0429124	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg18_v1_chr14_+_19473606_19473606	0.0428513	SOX2.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg18_v1_chrX_+_77052879_77052918	0.0428452	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr5_+_94752803_94752819	0.0428363	SOX2.p2	BC034772|FAM81B|153643|family with sequence similarity 81, member B	NM_152548|FAM81B|153643|family with sequence similarity 81, member B	AK058062|FAM81B|153643|family with sequence similarity 81, member B
hg18_v1_chr5_+_121493113_121493176	0.0428265	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chr13_-_45654292_45654295	0.0427774	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg18_v1_chr7_+_54577512_54577641	0.0427581	SOX2.p2	NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A	CR617415|VSTM2A|222008|V-set and transmembrane domain containing 2A	CR613464|VSTM2A|222008|V-set and transmembrane domain containing 2A	BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A
hg18_v1_chr5_+_138116972_138117015	0.042644	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr3_-_168674502_168674527	0.0424882	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chr6_-_112186977_112186977	0.0423794	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg18_v1_chr6_-_130578110_130578186	0.042353	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr5_-_156502363_156502498	0.042326	SOX2.p2	NM_001100816|MED7|9443|mediator complex subunit 7	AF031383|MED7|9443|mediator complex subunit 7	CR617029|MED7|9443|mediator complex subunit 7	BC005250|MED7|9443|mediator complex subunit 7	BC006968|MED7|9443|mediator complex subunit 7	AK308393|MED7|9443|mediator complex subunit 7	NM_004270|MED7|9443|mediator complex subunit 7
hg18_v1_chr12_+_68265535_68265553	0.0422907	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr13_-_110365336_110365396	0.042094	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10	CR604585|ANKRD10|55608|ankyrin repeat domain 10
hg18_v1_chr19_+_4983899_4983900	0.0420581	SOX2.p2	
hg18_v1_chr8_+_118216517_118216517	0.0420164	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr12_-_49763405_49763501	0.0419424	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr17_-_77092569_77092729	0.041914	SOX2.p2	CR603292|ACTG1|71|actin, gamma 1	CR610785|ACTG1|71|actin, gamma 1	CR608395|ACTG1|71|actin, gamma 1	CR624832|ACTG1|71|actin, gamma 1
hg18_v1_chr2_+_211129567_211129702	0.041908	SOX2.p2	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr2_+_71059082_71059089	0.0417941	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53	CR604385|ANKRD53|79998|ankyrin repeat domain 53
hg18_v1_chr19_+_50086299_50086349	0.0417034	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr1_+_157441824_157441850	0.0416499	SOX2.p2	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor	AF030521|DARC|2532|Duffy blood group, chemokine receptor	BC095496|DARC|2532|Duffy blood group, chemokine receptor
hg18_v1_chr17_-_53761119_53761150	0.041634	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg18_v1_chr2_+_190981257_190981360	0.0416315	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr17_+_56032385_56032557	0.0415148	SOX2.p2	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr1_+_151873174_151873354	0.0415116	SOX2.p2	AF318362|C1orf77|26097|chromosome 1 open reading frame 77	AK095230|C1orf77|26097|chromosome 1 open reading frame 77	AK308713|C1orf77|26097|chromosome 1 open reading frame 77	AK309844|C1orf77|26097|chromosome 1 open reading frame 77	CR612307|C1orf77|26097|chromosome 1 open reading frame 77	BC120961|C1orf77|26097|chromosome 1 open reading frame 77	BC120962|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr4_-_168392151_168392221	0.0414237	SOX2.p2	AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr12_-_21701985_21701999	0.0413562	SOX2.p2	CR617803|LDHB|3945|lactate dehydrogenase B	CR625734|LDHB|3945|lactate dehydrogenase B	BC071860|LDHB|3945|lactate dehydrogenase B	CR625893|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr21_-_31332665_31332665	0.0412756	SOX2.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr3_+_9748439_9748461	0.0412594	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr9_+_114288899_114289068	0.0410255	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr9_-_115101140_115101140	0.0409175	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr6_-_151754337_151754470	0.0409011	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg18_v1_chr10_-_123677370_123677661	0.0408881	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg18_v1_chr17_+_63338500_63338579	0.0408572	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr8_+_38704860_38704860	0.0408116	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr7_-_35701287_35701320	0.0406962	SOX2.p2	NM_022373|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr5_+_140494971_140495201	0.0406041	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr11_-_61316628_61316664	0.0405493	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg18_v1_chr19_+_11569234_11569349	0.0405291	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg18_v1_chr11_-_118167065_118167065	0.0404967	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr3_-_188935363_188935388	0.0404935	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr1_+_23990228_23990297	0.0404896	SOX2.p2	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr15_+_38673734_38673778	0.0404889	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr13_+_47775887_47775887	0.0404691	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr18_-_5187240_5187265	0.0401876	SOX2.p2	NM_001145194|LOC642597|642597|hypothetical protein LOC642597
hg18_v1_chr6_+_148705817_148705952	0.0400953	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr5_+_159781454_159781509	0.0399816	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr2_+_10101081_10101406	0.0399004	SOX2.p2	BC063286|KLF11|8462|Kruppel-like factor 11	NM_003597|KLF11|8462|Kruppel-like factor 11	AK315345|KLF11|8462|Kruppel-like factor 11	AF272830|KLF11|8462|Kruppel-like factor 11	AK289816|KLF11|8462|Kruppel-like factor 11	BC069383|KLF11|8462|Kruppel-like factor 11	BC074922|KLF11|8462|Kruppel-like factor 11	AF028008|KLF11|8462|Kruppel-like factor 11	AJ275989|KLF11|8462|Kruppel-like factor 11	AK316439|KLF11|8462|Kruppel-like factor 11	NM_001177716|KLF11|8462|Kruppel-like factor 11
hg18_v1_chr17_-_45621140_45621160	0.039857	SOX2.p2	
hg18_v1_chr9_+_122877056_122877110	0.03981	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr3_+_70068440_70068563	0.0398067	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr16_-_56038771_56038940	0.0398009	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chr13_+_96884682_96884725	0.0397714	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr3_+_150028130_150028300	0.0397673	SOX2.p2	CR623808|CPB1|1360|carboxypeptidase B1 (tissue)	NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)	M81057|CPB1|1360|carboxypeptidase B1 (tissue)	AK313940|CPB1|1360|carboxypeptidase B1 (tissue)	AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)	BC015338|CPB1|1360|carboxypeptidase B1 (tissue)	DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)	DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)	BT009910|CPB1|1360|carboxypeptidase B1 (tissue)
hg18_v1_chr1_+_148305965_148306062	0.0397244	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg18_v1_chr4_-_175441192_175441426	0.0396629	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	CR592920|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	CR617381|FBXO8|26269|F-box protein 8	CR620156|FBXO8|26269|F-box protein 8	CR620476|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg18_v1_chr8_+_145136155_145136217	0.0396504	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr1_+_149493861_149493886	0.0396435	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR609650|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR595476|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR608712|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR626776|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR611554|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR616606|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr21_+_32706615_32707032	0.0396327	SOX2.p2	CR604238|C21orf63|59271|chromosome 21 open reading frame 63	CR605246|C21orf63|59271|chromosome 21 open reading frame 63	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63	CR615783|C21orf63|59271|chromosome 21 open reading frame 63	BC038710|C21orf63|59271|chromosome 21 open reading frame 63	CR608560|C21orf63|59271|chromosome 21 open reading frame 63	CR608969|C21orf63|59271|chromosome 21 open reading frame 63	CR608735|C21orf63|59271|chromosome 21 open reading frame 63	AF358258|C21orf63|59271|chromosome 21 open reading frame 63	AY040087|C21orf63|59271|chromosome 21 open reading frame 63
hg18_v1_chr5_-_131907071_131907112	0.0396239	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg18_v1_chr1_-_203985701_203985724	0.0395401	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr3_+_157874898_157874898	0.0394751	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr3_-_15515382_15515382	0.0394299	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr1_-_174442987_174442997	0.0394295	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr5_-_22889487_22889487	0.03937	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr12_+_64869296_64869345	0.0393502	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chrX_-_46289765_46289835	0.039274	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg18_v1_chr3_-_27500882_27500986	0.0392454	SOX2.p2	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg18_v1_chr12_-_9651748_9651778	0.0392356	SOX2.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr8_-_72919161_72919204	0.039234	SOX2.p2	AF060154|MSC|9242|musculin
hg18_v1_chr7_-_86433139_86433226	0.0392284	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr2_-_228206045_228206279	0.0391375	SOX2.p2	AM393148|C2orf83|56918|chromosome 2 open reading frame 83	AM393273|C2orf83|56918|chromosome 2 open reading frame 83	BC131618|C2orf83|56918|chromosome 2 open reading frame 83	AL359944|C2orf83|56918|chromosome 2 open reading frame 83	CR749679|C2orf83|56918|chromosome 2 open reading frame 83	AK055355|C2orf83|56918|chromosome 2 open reading frame 83	NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83	NM_020161|C2orf83|56918|chromosome 2 open reading frame 83
hg18_v1_chr14_+_90650109_90650208	0.0391023	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr13_+_47775776_47775886	0.0390535	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr1_-_115102138_115102193	0.039052	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr3_+_116824840_116825226	0.0390145	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43	CR607941|GAP43|2596|growth associated protein 43	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	CR623492|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	CR614045|GAP43|2596|growth associated protein 43	CR612258|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg18_v1_chr21_+_39117064_39117101	0.038939	SOX2.p2	CR608636|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr9_-_4731085_4731262	0.0389341	SOX2.p2	AB021870|AK3|50808|adenylate kinase 3	DQ891660|AK3|50808|adenylate kinase 3	DQ894847|AK3|50808|adenylate kinase 3	AK027534|AK3|50808|adenylate kinase 3	BC013771|AK3|50808|adenylate kinase 3	AK001951|AK3|50808|adenylate kinase 3	AK001553|AK3|50808|adenylate kinase 3	AK298200|AK3|50808|adenylate kinase 3	NM_016282|AK3|50808|adenylate kinase 3
hg18_v1_chr7_-_99536852_99536928	0.038883	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr4_-_170428564_170428680	0.0387389	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr12_-_51332214_51332225	0.0387041	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg18_v1_chr11_+_123282307_123282348	0.0385375	SOX2.p2	BC137180|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	BC137206|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	NM_001005197|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4
hg18_v1_chr2_-_134042500_134042517	0.0385241	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chr4_-_174687931_174687958	0.0384457	SOX2.p2	NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2	AK122739|HAND2|9464|heart and neural crest derivatives expressed 2	FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2
hg18_v1_chr19_+_57564981_57565025	0.0384027	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg18_v1_chr7_-_27158726_27158741	0.0383928	SOX2.p2	
hg18_v1_chr7_+_94130752_94130882	0.038356	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr13_+_30672087_30672119	0.03834	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr3_-_187138342_187138468	0.0383112	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR603112|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR590258|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR608950|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr4_-_87500398_87500398	0.0383014	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chrX_+_133334965_133335121	0.0382835	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr17_-_7086466_7086508	0.038194	SOX2.p2	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg18_v1_chr2_+_61146542_61146622	0.0381688	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr7_-_50740491_50740491	0.0380496	SOX2.p2	NM_001001550|GRB10|2887|growth factor receptor-bound protein 10	U66065|GRB10|2887|growth factor receptor-bound protein 10	U69276|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr15_-_48434896_48434896	0.0379588	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr22_+_18081968_18082117	0.0379264	SOX2.p2	CR605683|SEPT5|5413|septin 5	CR609437|SEPT5|5413|septin 5	NM_002688|SEPT5|5413|septin 5	CR608884|SEPT5|5413|septin 5	CR608991|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	CR619352|SEPT5|5413|septin 5	CR610263|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR597468|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg18_v1_chr16_-_88613287_88613514	0.0379213	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr21_-_30791298_30791342	0.0379191	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg18_v1_chr8_-_125648576_125648599	0.0378807	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr1_+_210864411_210864438	0.037792	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg18_v1_chr12_-_69434598_69434637	0.0377532	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chrX_-_154216929_154217179	0.0377146	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg18_v1_chr1_-_101132833_101132878	0.0376981	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr12_+_97433536_97433540	0.0376557	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg18_v1_chr1_-_108544261_108544325	0.0375064	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg18_v1_chr17_-_70039107_70039169	0.0374879	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr21_-_39642880_39642920	0.0374749	SOX2.p2	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr5_-_75044001_75044035	0.0374654	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr11_+_82460766_82460767	0.0374579	SOX2.p2	BC031316|LOC100506233|100506233|hypothetical LOC100506233
hg18_v1_chr9_-_97309301_97309301	0.0374425	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr17_-_23721420_23721426	0.0373066	SOX2.p2	CR592309|VTN|7448|vitronectin	CR608407|VTN|7448|vitronectin	CR616555|VTN|7448|vitronectin	CR622613|VTN|7448|vitronectin
hg18_v1_chr5_+_140709907_140710011	0.0372701	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg18_v1_chr1_+_209586328_209586328	0.0372048	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr4_-_124063167_124063255	0.0371795	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr2_+_105799354_105799461	0.0370858	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg18_v1_chr11_+_69165018_69165056	0.0370438	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg18_v1_chr8_-_133561933_133562006	0.0370244	SOX2.p2	BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg18_v1_chr15_-_32446537_32447207	0.0369994	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	CR617279|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg18_v1_chr16_+_67130616_67130782	0.0369884	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr12_+_6473552_6473558	0.0369361	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr14_+_20048451_20048470	0.0369142	SOX2.p2	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)
hg18_v1_chr10_+_13243553_13243595	0.0368651	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr12_-_110378240_110378372	0.0367884	SOX2.p2	
hg18_v1_chr4_-_176970407_176970464	0.036762	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg18_v1_chr7_-_99536929_99536965	0.0367598	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr11_+_122806196_122806424	0.0367375	SOX2.p2	CR599196|LOC100128242|100128242|hypothetical LOC100128242
hg18_v1_chr10_+_69314944_69314966	0.0367199	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr7_-_99536966_99536981	0.0367195	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr17_-_7086369_7086464	0.0367098	SOX2.p2	CR457043|GABARAP|11337|GABA(A) receptor-associated protein	CR542235|GABARAP|11337|GABA(A) receptor-associated protein	CR624246|GABARAP|11337|GABA(A) receptor-associated protein	CR592433|GABARAP|11337|GABA(A) receptor-associated protein	BC106748|GABARAP|11337|GABA(A) receptor-associated protein	BC106749|GABARAP|11337|GABA(A) receptor-associated protein	CR597728|GABARAP|11337|GABA(A) receptor-associated protein	AF161586|GABARAP|11337|GABA(A) receptor-associated protein	AF044671|GABARAP|11337|GABA(A) receptor-associated protein
hg18_v1_chr19_-_6230797_6230809	0.0366976	SOX2.p2	
hg18_v1_chr6_+_33045070_33045089	0.0366469	SOX2.p2	
hg18_v1_chr15_+_38240555_38240713	0.0366089	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr6_-_108386000_108386011	0.0365796	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr19_-_63722929_63722953	0.036534	SOX2.p2	CR613426|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr12_-_21702021_21702034	0.0365218	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	CR591075|LDHB|3945|lactate dehydrogenase B	CR592578|LDHB|3945|lactate dehydrogenase B	CR624424|LDHB|3945|lactate dehydrogenase B	CR603165|LDHB|3945|lactate dehydrogenase B	CR609530|LDHB|3945|lactate dehydrogenase B	CR624226|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B	CR601136|LDHB|3945|lactate dehydrogenase B	CR604960|LDHB|3945|lactate dehydrogenase B	CR596890|LDHB|3945|lactate dehydrogenase B	CR600793|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr4_-_1655515_1655785	0.036437	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	AK125566|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg18_v1_chr5_+_176492662_176492685	0.0363356	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr8_+_145136571_145136631	0.0363177	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr4_+_5104140_5104223	0.0361718	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr6_+_62341966_62341966	0.0360891	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr6_-_94185780_94186028	0.0360816	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr7_-_93027057_93027057	0.0359911	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg18_v1_chr3_-_126325132_126325158	0.0359572	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr16_+_2503978_2503987	0.0359539	SOX2.p2	CR601237|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599331|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr2_+_104837004_104837008	0.0359454	SOX2.p2	
hg18_v1_chr19_-_17432724_17432762	0.0358771	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg18_v1_chr7_+_27746334_27746334	0.0358677	SOX2.p2	
hg18_v1_chr11_-_75833337_75833395	0.03582	SOX2.p2	
hg18_v1_chr3_+_95264513_95264555	0.0356272	SOX2.p2	CR594640|NSUN3|63899|NOP2/Sun domain family, member 3	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg18_v1_chr8_+_64243741_64243767	0.035524	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr3_-_25680723_25681235	0.0355114	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr19_-_57930102_57930118	0.0355004	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg18_v1_chr5_+_121675672_121675842	0.0354117	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg18_v1_chr3_-_52287695_52287698	0.0353914	SOX2.p2	NM_025222|WDR82|80335|WD repeat domain 82
hg18_v1_chr6_-_41148061_41148332	0.0353642	SOX2.p2	CR620893|C6orf130|221443|chromosome 6 open reading frame 130	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg18_v1_chr9_-_85512311_85512427	0.0353288	SOX2.p2	CR612259|UBQLN1|29979|ubiquilin 1	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg18_v1_chr1_+_157676135_157676172	0.0353269	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg18_v1_chr19_+_16105837_16105837	0.035321	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr4_+_88562726_88563080	0.035188	SOX2.p2	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR619203|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR626425|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR597296|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR620878|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR604538|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg18_v1_chr17_+_73511843_73511912	0.0351132	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr8_-_145132551_145132579	0.0350976	SOX2.p2	AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr1_+_26609819_26609857	0.0350181	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr14_-_72430545_72430578	0.034997	SOX2.p2	AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3	EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3	NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3
hg18_v1_chr2_-_47235929_47236020	0.0349495	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr22_+_27994216_27994339	0.0349403	SOX2.p2	CR625247|EWSR1|2130|Ewing sarcoma breakpoint region 1	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604952|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR608375|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604639|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg18_v1_chr19_+_7608020_7608035	0.0348892	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	CR611383|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	CR620863|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr18_+_74930398_74930477	0.0348076	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg18_v1_chr20_-_49592444_49592649	0.034803	SOX2.p2	EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr15_-_32833980_32834073	0.0347771	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg18_v1_chr11_-_62753574_62753699	0.0347753	SOX2.p2	AK127610|SLC22A25|387601|solute carrier family 22, member 25	BC101315|SLC22A25|387601|solute carrier family 22, member 25	BC101314|SLC22A25|387601|solute carrier family 22, member 25	AY437532|SLC22A25|387601|solute carrier family 22, member 25	BC101316|SLC22A25|387601|solute carrier family 22, member 25	BC101317|SLC22A25|387601|solute carrier family 22, member 25	NM_199352|SLC22A25|387601|solute carrier family 22, member 25
hg18_v1_chr3_+_179759181_179759311	0.0346796	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr17_-_36577949_36577949	0.0346729	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg18_v1_chr3_-_14964620_14964663	0.0346696	SOX2.p2	
hg18_v1_chr1_-_101132925_101132991	0.0346677	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr2_+_10180145_10180275	0.034543	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr8_+_62363078_62363131	0.0344351	SOX2.p2	NM_173519|CLVS1|157807|clavesin 1	AF445194|CLVS1|157807|clavesin 1	BC048992|CLVS1|157807|clavesin 1	AK091641|CLVS1|157807|clavesin 1	BC042617|CLVS1|157807|clavesin 1	CR591744|CLVS1|157807|clavesin 1	CR599613|CLVS1|157807|clavesin 1	AY094971|CLVS1|157807|clavesin 1	AK313040|CLVS1|157807|clavesin 1
hg18_v1_chr2_-_26395420_26395473	0.0343282	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg18_v1_chr14_+_59020894_59021067	0.0342982	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr5_-_180175146_180175151	0.0342976	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr5_+_85949511_85949517	0.034287	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr20_-_38751289_38751294	0.0342458	SOX2.p2	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg18_v1_chr1_-_45444812_45444865	0.0341697	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg18_v1_chr19_+_37528340_37528464	0.0341603	SOX2.p2	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg18_v1_chr12_-_90100710_90100715	0.0341472	SOX2.p2	AL355731|DCN|1634|decorin	CR613885|DCN|1634|decorin	CR616358|DCN|1634|decorin
hg18_v1_chr12_-_73889777_73889777	0.0341156	SOX2.p2	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg18_v1_chrX_+_46191567_46191744	0.0339279	SOX2.p2	NM_001129898|ZNF673|55634|zinc finger family member 673	NM_001129899|ZNF673|55634|zinc finger family member 673	NM_001129900|ZNF673|55634|zinc finger family member 673	NM_017776|ZNF673|55634|zinc finger family member 673	AK289703|ZNF673|55634|zinc finger family member 673	AK096413|ZNF673|55634|zinc finger family member 673	AK000351|ZNF673|55634|zinc finger family member 673
hg18_v1_chr19_-_63722732_63722798	0.0339246	SOX2.p2	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45	NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chrX_+_153318662_153318794	0.0338795	SOX2.p2	AK294893|GDI1|2664|GDP dissociation inhibitor 1	AK295306|GDI1|2664|GDP dissociation inhibitor 1	AK303248|GDI1|2664|GDP dissociation inhibitor 1	AL833629|GDI1|2664|GDP dissociation inhibitor 1	AK090746|GDI1|2664|GDP dissociation inhibitor 1	BC012201|GDI1|2664|GDP dissociation inhibitor 1	X79353|GDI1|2664|GDP dissociation inhibitor 1	BC000317|GDI1|2664|GDP dissociation inhibitor 1	D45021|GDI1|2664|GDP dissociation inhibitor 1	AF400433|GDI1|2664|GDP dissociation inhibitor 1	AM392660|GDI1|2664|GDP dissociation inhibitor 1	AM393226|GDI1|2664|GDP dissociation inhibitor 1	AM393601|GDI1|2664|GDP dissociation inhibitor 1	DQ892049|GDI1|2664|GDP dissociation inhibitor 1	DQ895243|GDI1|2664|GDP dissociation inhibitor 1	DQ896843|GDI1|2664|GDP dissociation inhibitor 1	AB102647|GDI1|2664|GDP dissociation inhibitor 1	BT019884|GDI1|2664|GDP dissociation inhibitor 1	CR542258|GDI1|2664|GDP dissociation inhibitor 1	CR542276|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr2_+_206255376_206255471	0.0338785	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg18_v1_chr10_+_115514567_115514567	0.033858	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr2_-_24160683_24160756	0.0338467	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	CR619579|TP53I3|9540|tumor protein p53 inducible protein 3
hg18_v1_chr9_-_135922912_135923117	0.0338076	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg18_v1_chr22_+_38627031_38627109	0.0336409	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	CR604186|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr9_-_35105844_35105911	0.0336381	SOX2.p2	AK022837|KIAA1539|80256|KIAA1539	AK021622|KIAA1539|80256|KIAA1539	BC004406|KIAA1539|80256|KIAA1539	NM_025182|KIAA1539|80256|KIAA1539	AK307682|KIAA1539|80256|KIAA1539
hg18_v1_chr19_+_977582_977598	0.0335286	SOX2.p2	AK295271|CNN2|1265|calponin 2	CR603928|CNN2|1265|calponin 2
hg18_v1_chr16_+_8722068_8722094	0.0334931	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr4_+_175441402_175441469	0.0334741	SOX2.p2	NM_001040157|KIAA1712|80817|KIAA1712
hg18_v1_chr4_+_53986759_53986864	0.0334184	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr7_-_122313646_122313822	0.033389	SOX2.p2	AY264289|CADPS2|93664|Ca++-dependent secretion activator 2	AF401638|CADPS2|93664|Ca++-dependent secretion activator 2	BC054339|CADPS2|93664|Ca++-dependent secretion activator 2	BC136601|CADPS2|93664|Ca++-dependent secretion activator 2	BC144278|CADPS2|93664|Ca++-dependent secretion activator 2	BC144279|CADPS2|93664|Ca++-dependent secretion activator 2	AK126518|CADPS2|93664|Ca++-dependent secretion activator 2
hg18_v1_chr15_-_75364387_75364387	0.033341	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr16_+_65196133_65196152	0.0331578	SOX2.p2	CR598427|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR615620|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR619122|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR618108|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr3_+_9748769_9748804	0.033121	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr4_+_38740246_38740246	0.0330068	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr2_+_172530120_172530246	0.0330005	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chr18_+_21967813_21967880	0.0329625	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg18_v1_chr3_+_9748395_9748415	0.0329603	SOX2.p2	AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr6_-_53034547_53034642	0.0329552	SOX2.p2	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr2_+_183651756_183652032	0.0329354	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg18_v1_chr11_-_10786610_10786654	0.0329333	SOX2.p2	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr15_+_38240501_38240542	0.0328725	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr12_+_64869181_64869269	0.0328504	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr7_+_99613282_99613318	0.0328097	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr17_+_63252087_63252242	0.0328002	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr17_-_3992993_3993010	0.0327722	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr5_+_128468785_128468878	0.0327613	SOX2.p2	CR623281|ISOC1|51015|isochorismatase domain containing 1
hg18_v1_chr1_-_101132993_101133005	0.0327526	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr5_-_149772528_149772551	0.0326035	SOX2.p2	
hg18_v1_chr2_-_165133239_165133262	0.0325295	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr3_-_140741063_140741162	0.0325242	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular	CR602881|RBP1|5947|retinol binding protein 1, cellular
hg18_v1_chr3_+_9748427_9748433	0.0324853	SOX2.p2	BC068262|BRPF1|7862|bromodomain and PHD finger containing, 1	BC036374|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_001003694|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_004634|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr16_+_2503994_2504000	0.0324764	SOX2.p2	CR597229|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr11_-_118167066_118167072	0.032438	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr9_+_126158935_126159046	0.0324364	SOX2.p2	
hg18_v1_chr3_-_167037946_167037977	0.0323703	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg18_v1_chr6_+_144227265_144227265	0.0323486	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr3_+_99288706_99288706	0.0323158	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr18_+_647633_647663	0.0323097	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	CR605696|TYMS|7298|thymidylate synthetase	CR612901|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase	CR618525|TYMS|7298|thymidylate synthetase	CR625557|TYMS|7298|thymidylate synthetase	CR611174|TYMS|7298|thymidylate synthetase
hg18_v1_chr18_-_71050268_71050319	0.032292	SOX2.p2	BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	CR610486|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr17_-_71287417_71287456	0.0322675	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595774|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR611244|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602412|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR604778|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR606388|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595544|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603793|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR617433|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602780|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618082|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR619729|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621264|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625366|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR591387|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603175|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621009|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618076|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR624690|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595062|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR597711|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602581|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR605171|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR610507|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR614120|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR615382|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR616111|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR608885|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR622957|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR599200|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625547|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg18_v1_chr1_+_357502_357521	0.0322325	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr3_-_71376919_71377005	0.0322313	SOX2.p2	AK074321|FOXP1|27086|forkhead box P1
hg18_v1_chr4_-_84150997_84151040	0.0322308	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr6_-_167195987_167196010	0.0321777	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr7_-_122985060_122985193	0.0321114	SOX2.p2	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	CR606314|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa
hg18_v1_chr16_-_128258_128651	0.0321053	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg18_v1_chr17_+_39619826_39619943	0.032082	SOX2.p2	AK294198|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AK096631|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_001076674|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_024107|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR622157|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AY358780|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC063489|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR623781|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC004306|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR591425|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR611525|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr18_+_12298242_12298289	0.0320532	SOX2.p2	AK022340|TUBB6|84617|tubulin, beta 6	AK098440|TUBB6|84617|tubulin, beta 6	AK304616|TUBB6|84617|tubulin, beta 6	BC002654|TUBB6|84617|tubulin, beta 6	CR607214|TUBB6|84617|tubulin, beta 6	NM_032525|TUBB6|84617|tubulin, beta 6	AK298196|TUBB6|84617|tubulin, beta 6	CR593665|TUBB6|84617|tubulin, beta 6	CR593961|TUBB6|84617|tubulin, beta 6	CR594370|TUBB6|84617|tubulin, beta 6	DQ893486|TUBB6|84617|tubulin, beta 6	DQ896394|TUBB6|84617|tubulin, beta 6
hg18_v1_chr16_+_55523248_55523248	0.032015	SOX2.p2	NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr6_-_27988152_27988152	0.0319906	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chr1_-_33587998_33588083	0.031984	SOX2.p2	AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)
hg18_v1_chr6_-_167195647_167195790	0.0319775	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr3_-_25681394_25681401	0.0319774	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr7_+_23112441_23112441	0.0319072	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg18_v1_chr4_-_70547962_70548067	0.031884	SOX2.p2	BC156239|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC157012|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	AJ006054|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC142640|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg18_v1_chr22_+_16020241_16020288	0.0317728	SOX2.p2	AF307448|CECR4|100130717|cat eye syndrome chromosome region, candidate 4 (non-protein coding)
hg18_v1_chr6_-_25044156_25044168	0.0317171	SOX2.p2	AK299047|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr12_+_109390586_109390798	0.0316225	SOX2.p2	AK296280|C12orf24|29902|chromosome 12 open reading frame 24	AK297684|C12orf24|29902|chromosome 12 open reading frame 24	NM_013300|C12orf24|29902|chromosome 12 open reading frame 24	CR623722|C12orf24|29902|chromosome 12 open reading frame 24	AK225731|C12orf24|29902|chromosome 12 open reading frame 24	CR602160|C12orf24|29902|chromosome 12 open reading frame 24	CR623239|C12orf24|29902|chromosome 12 open reading frame 24	U79274|C12orf24|29902|chromosome 12 open reading frame 24	BC020967|C12orf24|29902|chromosome 12 open reading frame 24
hg18_v1_chr4_+_123967265_123967323	0.0316166	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr10_+_122600843_122600927	0.0315584	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr1_-_152422322_152422348	0.031526	SOX2.p2	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg18_v1_chr4_-_100703847_100703847	0.0315217	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg18_v1_chr1_+_10381671_10381761	0.031465	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	CR607764|PGD|5226|phosphogluconate dehydrogenase	CR610062|PGD|5226|phosphogluconate dehydrogenase	CR610133|PGD|5226|phosphogluconate dehydrogenase	CR609478|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	CR610891|PGD|5226|phosphogluconate dehydrogenase	CR608757|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg18_v1_chr14_-_34414277_34414300	0.0313855	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr1_-_146090802_146091049	0.031333	SOX2.p2	AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1	BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11
hg18_v1_chr16_+_8714927_8714971	0.0313092	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr20_+_34603290_34603310	0.0312026	SOX2.p2	NM_006097|MYL9|10398|myosin, light chain 9, regulatory	NM_181526|MYL9|10398|myosin, light chain 9, regulatory
hg18_v1_chr4_+_53938666_53938766	0.0311503	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr17_-_26665144_26665164	0.0311162	SOX2.p2	CR621796|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr5_-_27074407_27074449	0.0310293	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg18_v1_chr1_-_174442999_174443000	0.03102	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr6_-_31618203_31618203	0.0308277	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chr5_+_132037271_132037271	0.0308146	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chr2_-_70329067_70329379	0.0307464	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr12_+_54721952_54721988	0.0306953	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	CR611958|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg18_v1_chr11_-_73559507_73559926	0.0306789	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg18_v1_chr1_+_86942810_86942868	0.0305855	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr20_+_32755778_32755951	0.0305263	SOX2.p2	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr8_+_118032370_118032398	0.0304957	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr21_+_37661063_37661169	0.0304387	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr5_+_156625629_156626032	0.0304146	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	CR596909|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr19_+_977555_977580	0.0303814	SOX2.p2	CR616871|CNN2|1265|calponin 2
hg18_v1_chr17_-_30909219_30909222	0.0302937	SOX2.p2	BC140847|SLFN14|342618|schlafen family member 14	BC157877|SLFN14|342618|schlafen family member 14	BC157879|SLFN14|342618|schlafen family member 14	NM_001129820|SLFN14|342618|schlafen family member 14
hg18_v1_chr17_-_24069299_24069412	0.0302807	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr11_+_6904167_6904269	0.0302645	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg18_v1_chr14_-_87863003_87863008	0.0302585	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr12_-_21702036_21702045	0.0302389	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	CR606657|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr1_+_50347176_50347181	0.0302265	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr22_-_16637221_16637225	0.0301455	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg18_v1_chr2_+_85213884_85214457	0.0301434	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg18_v1_chr4_+_75242671_75242788	0.0301147	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr1_-_115070413_115070531	0.0300609	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr2_+_61146866_61146866	0.0299815	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr17_+_43480674_43480722	0.0299381	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr7_-_95063738_95063860	0.0299219	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg18_v1_chr11_+_124294355_124294355	0.0298895	SOX2.p2	AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1
hg18_v1_chrX_-_100193500_100193575	0.029873	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chrX_+_24290798_24290798	0.0298475	SOX2.p2	NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1
hg18_v1_chr15_+_89248423_89248423	0.0298429	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg18_v1_chr13_-_35818777_35818939	0.029815	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr16_+_31632078_31632127	0.0297745	SOX2.p2	CR611323|ZNF720|124411|zinc finger protein 720	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg18_v1_chr17_+_62261696_62261699	0.0297129	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg18_v1_chr12_+_64869271_64869283	0.0296852	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr11_+_71221893_71221893	0.0296162	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr3_+_159310631_159310638	0.0296082	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr12_-_242255_242299	0.0295801	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg18_v1_chr6_+_31791063_31791111	0.02946	SOX2.p2	AJ315535|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315536|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315537|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	BC125138|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	NM_021246|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D
hg18_v1_chr12_-_91063441_91063803	0.0293847	SOX2.p2	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr4_+_187227302_187227344	0.0293459	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg18_v1_chr12_+_6473519_6473535	0.0292976	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr22_-_16020076_16020152	0.0292651	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr1_-_245561613_245561667	0.0292239	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr6_-_136652587_136652620	0.0291335	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg18_v1_chr16_+_24696069_24696181	0.0290222	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr3_+_39346200_39346298	0.02893	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr7_+_27746268_27746332	0.0289181	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr11_-_10835941_10836248	0.0289132	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg18_v1_chr1_+_243065215_243065449	0.0288787	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr20_+_30831298_30831318	0.0288029	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr6_-_31882704_31882744	0.0287915	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	CR601536|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg18_v1_chr17_-_70039187_70039207	0.0287641	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr11_-_7775064_7775095	0.02876	SOX2.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr7_+_27746231_27746267	0.0287187	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr6_+_126112431_126112488	0.028688	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr19_+_10626106_10626230	0.0286397	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr17_+_71772982_71773002	0.0286216	SOX2.p2	CR616618|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr8_+_145158432_145158594	0.0286035	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chr6_-_79844606_79844609	0.0285629	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr16_-_15095590_15095668	0.0285597	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg18_v1_chr13_-_24643778_24643856	0.0284964	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg18_v1_chr7_+_27746335_27746353	0.028435	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr5_-_157011949_157012005	0.0284257	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg18_v1_chr10_+_70152216_70152322	0.0283897	SOX2.p2	BC026036|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC089420|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chrX_+_70420259_70420278	0.028363	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr18_+_30652223_30652409	0.0283279	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	CR621250|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr5_-_147191428_147191452	0.0282599	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr17_+_27701251_27701288	0.0282531	SOX2.p2	CR617452|ZNF207|7756|zinc finger protein 207	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg18_v1_chr13_-_52320774_52320779	0.0282487	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8
hg18_v1_chr9_+_122923864_122923914	0.0282478	SOX2.p2	AK090600|CEP110|11064|centrosomal protein 110kDa	BC002932|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr11_-_118167073_118167106	0.0281938	SOX2.p2	Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr1_+_165565006_165565121	0.0281867	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr12_-_55990512_55990512	0.028065	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg18_v1_chr12_-_131882616_131882644	0.028036	SOX2.p2	
hg18_v1_chr1_+_26609893_26609968	0.0279788	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr1_-_167603623_167603809	0.0279721	SOX2.p2	CR605539|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	CR599535|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr3_-_56673113_56673113	0.0279369	SOX2.p2	BC029354|C3orf63|23272|chromosome 3 open reading frame 63	NM_015224|C3orf63|23272|chromosome 3 open reading frame 63
hg18_v1_chr10_+_52420936_52420957	0.0278945	SOX2.p2	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg18_v1_chr1_-_148155986_148156070	0.0278524	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg18_v1_chr12_-_101396459_101396558	0.0278522	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr5_-_146441184_146441246	0.027773	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr8_-_133561738_133561872	0.0276691	SOX2.p2	AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg18_v1_chr10_-_21854616_21854616	0.0276417	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg18_v1_chr1_+_112099703_112099781	0.0275994	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr1_-_117465872_117465936	0.0275921	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	CR595070|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45	CR602755|TRIM45|80263|tripartite motif containing 45
hg18_v1_chr3_-_32587188_32587369	0.0275744	SOX2.p2	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR619992|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR595277|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR623843|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1
hg18_v1_chr22_+_42908589_42908589	0.0275676	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg18_v1_chr21_+_42583259_42583306	0.0275643	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg18_v1_chr7_-_96489884_96489918	0.027563	SOX2.p2	
hg18_v1_chr22_-_16020153_16020167	0.0275532	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR601915|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR606299|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr14_-_20179689_20179689	0.0275515	SOX2.p2	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1
hg18_v1_chr15_-_74941339_74941339	0.027551	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr5_+_178419938_178420212	0.0275464	SOX2.p2	BC063312|ZNF354C|30832|zinc finger protein 354C	AF525463|ZNF354C|30832|zinc finger protein 354C	NM_014594|ZNF354C|30832|zinc finger protein 354C
hg18_v1_chr17_-_39094427_39094456	0.0274762	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr2_+_203901160_203901600	0.0273334	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr22_+_37823174_37823258	0.0273275	SOX2.p2	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
hg18_v1_chr11_-_66070050_66070077	0.0272978	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg18_v1_chr7_-_143230096_143230300	0.0272808	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr17_-_3992939_3992989	0.0272643	SOX2.p2	
hg18_v1_chr6_-_96131974_96132046	0.0272625	SOX2.p2	
hg18_v1_chr16_+_65196125_65196129	0.0272517	SOX2.p2	CR621105|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR625182|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr22_-_16637238_16637430	0.0271566	SOX2.p2	CR600376|BID|637|BH3 interacting domain death agonist	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	CR611157|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist
hg18_v1_chr11_-_123261549_123261549	0.0271446	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg18_v1_chr15_-_26240844_26240903	0.0271164	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2
hg18_v1_chr11_+_44026106_44026140	0.027112	SOX2.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr17_+_27701291_27701298	0.0271048	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg18_v1_chr2_+_219354692_219354744	0.0270635	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr19_+_57492236_57492262	0.0270612	SOX2.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chr5_-_41107161_41107200	0.0270579	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg18_v1_chr17_+_53761293_53761374	0.0270208	SOX2.p2	AK311311|LOC100506779|100506779|hypothetical LOC100506779	AK311208|LOC100506779|100506779|hypothetical LOC100506779
hg18_v1_chr3_-_184363157_184363360	0.0269955	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg18_v1_chr15_+_94676691_94676797	0.0269699	SOX2.p2	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr8_+_61592278_61592331	0.0269672	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr6_+_31838751_31838786	0.0269468	SOX2.p2	NM_001039651|C6orf26|401251|chromosome 6 open reading frame 26	BC137541|C6orf26|401251|chromosome 6 open reading frame 26	BC137542|C6orf26|401251|chromosome 6 open reading frame 26
hg18_v1_chr22_-_17303654_17303809	0.0269012	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr11_-_118167036_118167057	0.0268062	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr5_+_156540425_156540565	0.0266986	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg18_v1_chr8_+_133856738_133856792	0.026689	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr3_+_198961620_198961657	0.0266677	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chrX_-_48743561_48743624	0.0266383	SOX2.p2	AB032993|GRIPAP1|56850|GRIP1 associated protein 1	AK292158|GRIPAP1|56850|GRIP1 associated protein 1	BC101544|GRIPAP1|56850|GRIP1 associated protein 1	BC101546|GRIPAP1|56850|GRIP1 associated protein 1	BX647801|GRIPAP1|56850|GRIP1 associated protein 1	BX647804|GRIPAP1|56850|GRIP1 associated protein 1	NM_020137|GRIPAP1|56850|GRIP1 associated protein 1	NM_207672|GRIPAP1|56850|GRIP1 associated protein 1
hg18_v1_chr4_+_57468792_57468833	0.0265406	SOX2.p2	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr15_-_96875133_96875133	0.0264741	SOX2.p2	AK097062|FAM169B|283777|family with sequence similarity 169, member B	NM_182562|FAM169B|283777|family with sequence similarity 169, member B
hg18_v1_chr18_+_31074985_31075104	0.026409	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr12_-_92001543_92001625	0.0264041	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr16_-_3008162_3008188	0.0263988	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	CR614114|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg18_v1_chr3_+_198961020_198961158	0.0263626	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr4_-_166253374_166253448	0.026281	SOX2.p2	BC036301|TMEM192|201931|transmembrane protein 192	BX648915|TMEM192|201931|transmembrane protein 192	BX538029|TMEM192|201931|transmembrane protein 192
hg18_v1_chr3_-_169295752_169295867	0.0262669	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr1_+_246703249_246703274	0.0262646	SOX2.p2	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3
hg18_v1_chr8_+_64243662_64243735	0.0262626	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr3_-_25658829_25658855	0.0261935	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr12_+_43896134_43896142	0.0261505	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg18_v1_chr12_-_21702000_21702019	0.0261293	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B	CR602865|LDHB|3945|lactate dehydrogenase B	CR612775|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr19_+_54884252_54884373	0.0260661	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr16_-_4792857_4792951	0.0260529	SOX2.p2	CR603174|ROGDI|79641|rogdi homolog (Drosophila)
hg18_v1_chr11_+_62231741_62231882	0.0260451	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr4_-_122213018_122213143	0.0260394	SOX2.p2	BC019351|C4orf31|79625|chromosome 4 open reading frame 31	AK289615|C4orf31|79625|chromosome 4 open reading frame 31	NM_024574|C4orf31|79625|chromosome 4 open reading frame 31
hg18_v1_chr17_+_27701300_27701417	0.0260208	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	CR616570|ZNF207|7756|zinc finger protein 207	CR617272|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg18_v1_chr19_-_3930828_3931135	0.0260204	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg18_v1_chrX_-_100490329_100490405	0.0259933	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg18_v1_chr1_+_68070573_68070579	0.0259887	SOX2.p2	
hg18_v1_chr5_-_134762785_134762790	0.025979	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y	CR624310|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_+_243065537_243065589	0.0259331	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr11_-_10546654_10546940	0.0258336	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR598862|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614245|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR604450|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR612000|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614790|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR599107|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR595979|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR597409|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR605021|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg18_v1_chr3_+_161956689_161956689	0.0257969	SOX2.p2	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr4_-_83569476_83569571	0.0257138	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr7_-_33068699_33068996	0.0256999	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr6_-_88911708_88911802	0.0256716	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg18_v1_chr6_-_55848317_55848333	0.0256096	SOX2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg18_v1_chrX_-_106846684_106846886	0.0255988	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	CR599119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr13_+_36291306_36291493	0.0255919	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg18_v1_chr15_-_63069280_63069318	0.0255903	SOX2.p2	CR597831|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR601212|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr5_+_169713458_169713458	0.0255815	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg18_v1_chr18_+_54681040_54681159	0.025559	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr2_-_190336168_190336197	0.0255589	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg18_v1_chr1_+_190394214_190394390	0.0255182	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18	CR602825|RGS18|64407|regulator of G-protein signaling 18	DQ891393|RGS18|64407|regulator of G-protein signaling 18	DQ894569|RGS18|64407|regulator of G-protein signaling 18
hg18_v1_chr3_+_23822481_23822531	0.0255119	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr9_-_15500899_15501022	0.0254066	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg18_v1_chr22_-_16637194_16637220	0.0253506	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg18_v1_chr21_+_16024157_16024235	0.0253197	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr7_+_137795719_137795833	0.0253071	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr22_+_44828338_44828438	0.0252827	SOX2.p2	
hg18_v1_chr19_+_7608015_7608017	0.0251777	SOX2.p2	CR611137|STXBP2|6813|syntaxin binding protein 2	CR597245|STXBP2|6813|syntaxin binding protein 2	CR613567|STXBP2|6813|syntaxin binding protein 2	CR625756|STXBP2|6813|syntaxin binding protein 2	CR626453|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr14_-_93493519_93493519	0.0251556	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg18_v1_chr19_+_56452775_56452775	0.0251086	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg18_v1_chr11_-_4555625_4555626	0.025042	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr17_+_39620099_39620107	0.0250064	SOX2.p2	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr5_+_159781413_159781451	0.0249984	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr12_+_32003648_32003674	0.0249935	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr2_+_181553783_181553926	0.0249032	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr3_-_48344834_48344834	0.0248967	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr9_-_122877231_122877272	0.0248575	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr3_-_48931821_48931821	0.0248415	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg18_v1_chr3_-_167037861_167037914	0.024832	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	CR611139|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg18_v1_chr4_-_152316105_152316153	0.0248273	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr18_+_53967544_53967566	0.0248185	SOX2.p2	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_+_148318770_148318841	0.0247533	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr1_+_32777358_32777358	0.0247106	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr4_-_83702123_83702154	0.0247035	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg18_v1_chr3_-_87408301_87408426	0.0246812	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chrX_+_71318250_71318351	0.024525	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg18_v1_chr6_+_17708483_17708674	0.0244365	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg18_v1_chr2_-_119840727_119840889	0.0243267	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg18_v1_chr17_+_34574844_34574863	0.0243129	SOX2.p2	AK093715|LOC284108|284108|hypothetical protein LOC284108
hg18_v1_chr20_-_30795463_30795474	0.0243046	SOX2.p2	AK096307|COMMD7|149951|COMM domain containing 7	BC022073|COMMD7|149951|COMM domain containing 7	NM_001099339|COMMD7|149951|COMM domain containing 7	NM_053041|COMMD7|149951|COMM domain containing 7
hg18_v1_chr7_-_16888121_16888137	0.0242862	SOX2.p2	AY359065|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)	BC058284|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)	NM_176813|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)
hg18_v1_chr13_+_112681626_112681655	0.0242861	SOX2.p2	AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg18_v1_chr19_+_7608010_7608014	0.0242805	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr21_-_41801778_41801937	0.0242574	SOX2.p2	AK291813|TMPRSS2|7113|transmembrane protease, serine 2	AK296860|TMPRSS2|7113|transmembrane protease, serine 2	NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2	BC051839|TMPRSS2|7113|transmembrane protease, serine 2	AF270487|TMPRSS2|7113|transmembrane protease, serine 2	BC035623|TMPRSS2|7113|transmembrane protease, serine 2
hg18_v1_chr11_-_6661093_6661207	0.0242298	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr3_-_184363126_184363141	0.0242046	SOX2.p2	DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3
hg18_v1_chr11_+_34029764_34029814	0.0241996	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr12_-_89976261_89976261	0.024196	SOX2.p2	NM_007035|KERA|11081|keratocan
hg18_v1_chr1_+_200124620_200124808	0.0241816	SOX2.p2	BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	CR626801|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr2_+_8739563_8739745	0.0241426	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR607131|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR626410|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR620423|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR611001|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR614653|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg18_v1_chr12_-_10846435_10846492	0.0240434	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr20_-_33793286_33793437	0.0240423	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr22_-_16636748_16636812	0.0239388	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg18_v1_chr10_-_43212166_43212284	0.023885	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chrX_+_153318452_153318533	0.0238555	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr17_+_27838821_27838926	0.023813	SOX2.p2	
hg18_v1_chr17_+_43480723_43480723	0.0237873	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr3_-_102714663_102714774	0.023769	SOX2.p2	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg18_v1_chr6_+_29382381_29382445	0.0237503	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr3_-_127810087_127810087	0.0237284	SOX2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr3_-_121117647_121117670	0.0237026	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr13_-_102517196_102517196	0.023691	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr6_-_55848346_55848351	0.023685	SOX2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr2_-_47257117_47257144	0.0236837	SOX2.p2	CR590655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR601833|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605532|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606009|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR618742|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR624584|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR625162|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR591343|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR593656|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR594016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR597132|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617592|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605025|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605737|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR607372|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617995|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606757|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR615210|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg18_v1_chr3_+_185335503_185335519	0.0236198	SOX2.p2	BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg18_v1_chrX_-_74062005_74062044	0.0235898	SOX2.p2	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg18_v1_chr6_+_126112417_126112424	0.0235578	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chrX_+_46289871_46289906	0.0234451	SOX2.p2	BC034616|LOC401588|401588|hypothetical LOC401588	AK056314|LOC401588|401588|hypothetical LOC401588	CR619110|LOC401588|401588|hypothetical LOC401588
hg18_v1_chr2_-_156894927_156894946	0.0234374	SOX2.p2	EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr4_-_152155827_152155909	0.0233685	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr8_-_87824996_87825060	0.0232757	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg18_v1_chr2_-_234441766_234441786	0.023243	SOX2.p2	AK301707|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr14_+_23508922_23509155	0.0231918	SOX2.p2	NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2
hg18_v1_chr17_-_928960_928990	0.0231916	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg18_v1_chr11_-_40272239_40272239	0.0231782	SOX2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg18_v1_chr1_-_17179694_17179779	0.023177	SOX2.p2	BC028033|MFAP2|4237|microfibrillar-associated protein 2	CR619947|MFAP2|4237|microfibrillar-associated protein 2	CR597163|MFAP2|4237|microfibrillar-associated protein 2	AK222751|MFAP2|4237|microfibrillar-associated protein 2	CR590231|MFAP2|4237|microfibrillar-associated protein 2	BC015039|MFAP2|4237|microfibrillar-associated protein 2	NM_001135248|MFAP2|4237|microfibrillar-associated protein 2	NM_002403|MFAP2|4237|microfibrillar-associated protein 2
hg18_v1_chr12_+_74014685_74014774	0.0230997	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chrX_+_108666891_108667130	0.0230827	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr8_-_121893449_121893453	0.0230579	SOX2.p2	BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr1_+_10412745_10412745	0.0230453	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr5_+_109052945_109052982	0.0230164	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chrX_-_47374647_47374647	0.0229553	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg18_v1_chr12_+_105275565_105275636	0.022934	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg18_v1_chr8_-_133756943_133757076	0.0228158	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg18_v1_chr2_+_27293737_27293779	0.0227788	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr1_-_200182090_200182313	0.0226781	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr10_+_114033403_114033482	0.0226415	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg18_v1_chr1_-_76170563_76170703	0.0226409	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg18_v1_chr14_-_76564727_76564899	0.0226278	SOX2.p2	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr1_+_183392814_183392973	0.0226098	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr17_+_72827968_72828003	0.0225485	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg18_v1_chr7_+_141054621_141054621	0.0225457	SOX2.p2	AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)	NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)
hg18_v1_chr9_-_124630630_124630755	0.0224788	SOX2.p2	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr7_-_150352484_150352518	0.0224684	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg18_v1_chr14_+_74964672_74964860	0.0223847	SOX2.p2	NM_001135048|JDP2|122953|Jun dimerization protein 2	BC068196|JDP2|122953|Jun dimerization protein 2	NM_130469|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr17_+_69875140_69875239	0.0223769	SOX2.p2	BC143807|GPR142|350383|G protein-coupled receptor 142	AB196530|GPR142|350383|G protein-coupled receptor 142	AY288421|GPR142|350383|G protein-coupled receptor 142	NM_181790|GPR142|350383|G protein-coupled receptor 142
hg18_v1_chr14_-_59020878_59020883	0.022309	SOX2.p2	
hg18_v1_chr12_-_54996098_54996394	0.0222865	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr5_-_132327090_132327128	0.022275	SOX2.p2	BC063007|AFF4|27125|AF4/FMR2 family, member 4	BC025700|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr5_+_79651545_79651598	0.0222713	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr12_+_22090485_22090506	0.0221668	SOX2.p2	CR625607|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR622845|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR614682|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg18_v1_chr19_+_7607976_7608009	0.0221244	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	CR601226|STXBP2|6813|syntaxin binding protein 2	CR611106|STXBP2|6813|syntaxin binding protein 2	CR617049|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr15_+_89061579_89061658	0.0221236	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg18_v1_chrX_+_136475979_136476011	0.0221104	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	NM_003413|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr16_-_70763849_70763849	0.0220554	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr4_+_15089931_15089963	0.022038	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr1_-_180908639_180908689	0.0220157	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr12_+_68265469_68265519	0.0220088	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR616195|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR599514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR606401|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR615034|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR618455|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR621324|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr11_-_62231636_62231775	0.0220076	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr20_+_34635362_34635469	0.021998	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr6_-_30762957_30762971	0.0219436	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr15_-_63199228_63199345	0.0218903	SOX2.p2	BT007395|PDCD7|10081|programmed cell death 7	BC016992|PDCD7|10081|programmed cell death 7
hg18_v1_chr2_+_17798860_17798924	0.0218706	SOX2.p2	CR936783|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	NM_001130009|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	AK093631|LOC284952|284952|hypothetical protein LOC284952
hg18_v1_chr17_-_16038607_16038680	0.0218205	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr17_-_4967120_4967136	0.0216913	SOX2.p2	NM_014519|ZNF232|7775|zinc finger protein 232	AK316369|ZNF232|7775|zinc finger protein 232
hg18_v1_chr7_+_100047660_100047751	0.0215601	SOX2.p2	CR609640|MOSPD3|64598|motile sperm domain containing 3	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr19_+_57464659_57464678	0.0215101	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr1_+_12958129_12958135	0.0214658	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22
hg18_v1_chr6_+_131936057_131936115	0.0214423	SOX2.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr13_+_51484517_51484561	0.0214301	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chr3_-_197726587_197726633	0.0214003	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr1_-_201422490_201422532	0.0213853	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr5_+_138117017_138117044	0.0213664	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr4_+_72078255_72078416	0.0213544	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr20_+_61622985_61623074	0.0213496	SOX2.p2	CR608021|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg18_v1_chr1_-_230717850_230717934	0.0213389	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg18_v1_chr8_+_143542378_143542378	0.0213133	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg18_v1_chr8_-_27171852_27171897	0.0212907	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg18_v1_chrX_-_73751152_73751154	0.0212847	SOX2.p2	
hg18_v1_chr1_-_152422304_152422308	0.0212588	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg18_v1_chr16_+_6009095_6009357	0.021253	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr2_+_131229477_131229693	0.0210502	SOX2.p2	AK289525|FAM123C|205147|family with sequence similarity 123C	NM_152698|FAM123C|205147|family with sequence similarity 123C	AK095696|FAM123C|205147|family with sequence similarity 123C	AK291424|FAM123C|205147|family with sequence similarity 123C	BC113445|FAM123C|205147|family with sequence similarity 123C	BC113447|FAM123C|205147|family with sequence similarity 123C	BC143806|FAM123C|205147|family with sequence similarity 123C	NM_001105193|FAM123C|205147|family with sequence similarity 123C
hg18_v1_chr17_-_10313600_10313600	0.0210356	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg18_v1_chr14_+_104851948_104852223	0.0208934	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_001100913|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_015197|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg18_v1_chr3_-_121445831_121445831	0.0208921	SOX2.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg18_v1_chr8_+_126511739_126511783	0.0208778	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr14_-_106289751_106290256	0.0208633	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr3_+_185521139_185521176	0.0208354	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr7_-_139825802_139825837	0.0208195	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chrX_-_153952447_153952836	0.0208047	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr2_+_84986510_84986652	0.0207755	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr10_-_123677926_123678054	0.0207645	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg18_v1_chr10_-_127397990_127398058	0.0207638	SOX2.p2	AK094354|FLJ37035|399821|hypothetical LOC399821
hg18_v1_chr22_+_42900168_42900211	0.0207373	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg18_v1_chr2_+_203485175_203485361	0.020709	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg18_v1_chrX_-_138114846_138114881	0.020705	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr1_+_13615388_13615388	0.0206228	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr5_+_110455961_110456028	0.0205716	SOX2.p2	CR600030|WDR36|134430|WD repeat domain 36
hg18_v1_chr10_+_6284845_6284919	0.0205651	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg18_v1_chr11_-_82675024_82675082	0.0205643	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg18_v1_chr15_-_88143721_88143789	0.020551	SOX2.p2	CR595462|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr3_+_180763432_180763439	0.0205189	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A	CR594699|ACTL6A|86|actin-like 6A
hg18_v1_chr1_-_54644269_54644483	0.0204563	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg18_v1_chrX_-_37916138_37916147	0.0203878	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr21_-_18697829_18697843	0.020351	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr1_+_65503011_65503024	0.0203402	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg18_v1_chr1_-_205186330_205186438	0.0202983	SOX2.p2	BC110494|PIGR|5284|polymeric immunoglobulin receptor	BC110495|PIGR|5284|polymeric immunoglobulin receptor	CR749533|PIGR|5284|polymeric immunoglobulin receptor	S62403|PIGR|5284|polymeric immunoglobulin receptor	AF272149|PIGR|5284|polymeric immunoglobulin receptor	X73079|PIGR|5284|polymeric immunoglobulin receptor	AK225471|PIGR|5284|polymeric immunoglobulin receptor	NM_002644|PIGR|5284|polymeric immunoglobulin receptor
hg18_v1_chr16_+_55523526_55523759	0.020292	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr22_+_28609201_28609321	0.0202893	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg18_v1_chrX_-_154495686_154495815	0.0202735	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr22_-_16020168_16020190	0.0202624	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr1_-_198645455_198645609	0.0202586	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg18_v1_chr10_-_123724631_123724692	0.0202468	SOX2.p2	
hg18_v1_chr9_+_132961683_132961715	0.0202295	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg18_v1_chr14_-_19993032_19993106	0.020207	SOX2.p2	CR594397|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR597694|OSGEP|55644|O-sialoglycoprotein endopeptidase	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr1_-_143708467_143708467	0.0201532	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr16_+_30326077_30326235	0.0201156	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr2_-_152740387_152740806	0.0200827	SOX2.p2	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg18_v1_chr9_-_21295311_21295311	0.0200758	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr10_-_30958631_30958652	0.0200579	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg18_v1_chr6_-_139737042_139737191	0.0200296	SOX2.p2	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr19_-_46561841_46561917	0.0200215	SOX2.p2	BC004157|B9D2|80776|B9 protein domain 2	BC004444|B9D2|80776|B9 protein domain 2	NM_030578|B9D2|80776|B9 protein domain 2
hg18_v1_chr4_+_5104365_5104491	0.0199059	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr12_-_54995923_54996039	0.0198657	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr12_-_54996044_54996091	0.0198454	SOX2.p2	CR603286|CNPY2|10330|canopy 2 homolog (zebrafish)	CR596106|CNPY2|10330|canopy 2 homolog (zebrafish)	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr2_+_182558795_182558993	0.0198164	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr11_-_780103_780125	0.0197534	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr5_-_132326872_132326960	0.019669	SOX2.p2	AF213987|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr16_+_31098931_31098958	0.0196418	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma	CR591758|FUS|2521|fused in sarcoma
hg18_v1_chr6_+_26128656_26128696	0.0196063	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg18_v1_chr1_-_152422309_152422319	0.0196004	SOX2.p2	AK308007|TPM3|7170|tropomyosin 3
hg18_v1_chr22_-_16637160_16637189	0.019599	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg18_v1_chr2_-_206659140_206659172	0.0195935	SOX2.p2	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chr6_-_155818728_155818728	0.0195627	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg18_v1_chr7_-_130004119_130004151	0.0195578	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chr13_+_97593411_97593434	0.0195336	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr5_+_173247919_173248049	0.0194893	SOX2.p2	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg18_v1_chr8_-_17624304_17624363	0.0194677	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr2_+_79200995_79201094	0.0194408	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr7_+_37689903_37689911	0.01944	SOX2.p2	
hg18_v1_chr13_-_29067584_29067658	0.0194299	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr7_+_44802691_44802793	0.0193835	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR594762|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr7_-_26206891_26206943	0.0192978	SOX2.p2	BX537494|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_002137|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_031243|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr13_-_35818603_35818645	0.0191777	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr2_-_72228427_72228473	0.0191446	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg18_v1_chr1_-_172059780_172059949	0.0191368	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr12_-_55040179_55040182	0.0191082	SOX2.p2	AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr5_-_41546384_41546486	0.0190981	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr2_+_102719773_102719855	0.019037	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg18_v1_chr5_+_140481583_140481605	0.0190137	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr1_-_222688337_222688430	0.0190004	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg18_v1_chr7_+_44802798_44802826	0.0189849	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR626590|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR618683|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR603867|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr1_-_110949867_110949867	0.0189607	SOX2.p2	NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg18_v1_chr2_+_27293846_27293921	0.0189369	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr16_-_30993004_30993141	0.0188955	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg18_v1_chr2_+_160277273_160277300	0.0188857	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr7_-_44854092_44854114	0.0188294	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg18_v1_chr2_-_136005238_136005275	0.0186911	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg18_v1_chr11_+_18390421_18390506	0.018684	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg18_v1_chr10_+_98730977_98731137	0.0186823	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg18_v1_chr3_-_123223658_123223816	0.0186775	SOX2.p2	AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1	BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1
hg18_v1_chr6_-_79844503_79844573	0.0186759	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr1_-_174442906_174442977	0.0186748	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr1_+_179164195_179164213	0.0186744	SOX2.p2	
hg18_v1_chr8_-_27171814_27171844	0.0186313	SOX2.p2	CR591479|STMN4|81551|stathmin-like 4	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg18_v1_chr7_-_50485515_50485581	0.018606	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg18_v1_chr10_+_12431714_12431732	0.0185751	SOX2.p2	BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg18_v1_chr19_+_60077360_60077557	0.0185499	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg18_v1_chr17_+_39654808_39654935	0.0184394	SOX2.p2	
hg18_v1_chr16_-_65774904_65774980	0.0184093	SOX2.p2	AK094787|KIAA0895L|653319|KIAA0895-like	AK096855|KIAA0895L|653319|KIAA0895-like	BC080183|KIAA0895L|653319|KIAA0895-like
hg18_v1_chr1_-_233558114_233558115	0.0183998	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr20_-_61933012_61933070	0.0183892	SOX2.p2	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46	BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46
hg18_v1_chr19_+_61607194_61607194	0.0183208	SOX2.p2	NM_001159860|ZNF583|147949|zinc finger protein 583
hg18_v1_chr17_+_46176105_46176113	0.0183119	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr6_-_27943287_27943349	0.0182682	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg18_v1_chr22_+_25155220_25155428	0.0182671	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr8_-_71146022_71146028	0.0182366	SOX2.p2	BC052311|PRDM14|63978|PR domain containing 14
hg18_v1_chr17_-_45620911_45620925	0.0182046	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr2_+_44356100_44356178	0.0181898	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg18_v1_chr16_+_8714326_8714347	0.0181704	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr6_-_76010169_76010229	0.0181234	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR610116|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr5_-_157011665_157011748	0.0181119	SOX2.p2	
hg18_v1_chr11_+_17714070_17714121	0.0181059	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg18_v1_chr8_-_121893468_121893907	0.0181	SOX2.p2	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr1_-_201422450_201422458	0.0180775	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr19_-_63722979_63723022	0.0180659	SOX2.p2	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr3_+_45705918_45705961	0.0180593	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg18_v1_chr6_-_66473790_66473838	0.0180565	SOX2.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg18_v1_chr8_-_103945566_103945576	0.0180491	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg18_v1_chr7_-_129632452_129632573	0.0180454	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg18_v1_chr2_-_198007984_198008008	0.0180439	SOX2.p2	BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr11_+_10786137_10786218	0.0180002	SOX2.p2	AK055888|LOC144017|144017|hypothetical protein LOC144017
hg18_v1_chr3_-_140741167_140741179	0.0179549	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg18_v1_chr11_+_8059267_8059484	0.0178906	SOX2.p2	NM_177972|TUB|7275|tubby homolog (mouse)	U54644|TUB|7275|tubby homolog (mouse)
hg18_v1_chr6_-_133008834_133008858	0.0177742	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg18_v1_chr14_+_19993204_19993283	0.0177211	SOX2.p2	CR605968|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594913|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR617692|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR618727|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR620565|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR623328|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603451|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603476|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR613058|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR622630|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611116|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR597601|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR607088|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR610342|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR599111|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR608824|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR609502|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611978|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR605079|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR593576|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR595578|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr1_-_1613802_1613848	0.017703	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg18_v1_chr19_-_7607852_7607854	0.017677	SOX2.p2	
hg18_v1_chr11_-_14336606_14336648	0.0176167	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr6_+_88026338_88026428	0.0176078	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chr6_-_53321706_53321901	0.0175397	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr7_+_142885087_142885087	0.0175352	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg18_v1_chr17_+_60563963_60564120	0.0173586	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	CR613211|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg18_v1_chr14_-_76564374_76564501	0.0173002	SOX2.p2	AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr5_+_139856688_139856810	0.0172731	SOX2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chrX_+_65152004_65152029	0.0172468	SOX2.p2	
hg18_v1_chr19_+_45774569_45774610	0.0172454	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr6_-_53321658_53321702	0.0172326	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr15_+_63609791_63609893	0.0172219	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr12_-_47532171_47532228	0.0171696	SOX2.p2	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg18_v1_chr12_-_55040183_55040303	0.0171451	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr2_+_112749617_112749648	0.0171363	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg18_v1_chr16_-_19440786_19440969	0.0171061	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR624901|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR590251|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605351|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR607083|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605785|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR612471|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR591783|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR620034|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg18_v1_chr6_-_53321545_53321652	0.016982	SOX2.p2	AK125098|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	CR597148|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr10_-_105100834_105100866	0.016977	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr2_-_202215593_202215684	0.0169666	SOX2.p2	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr14_-_87806913_87807026	0.0169571	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr4_-_120462705_120462763	0.0169133	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr22_+_42908548_42908567	0.0169	SOX2.p2	AK307299|PARVG|64098|parvin, gamma
hg18_v1_chr6_+_37895244_37895293	0.0168766	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr11_-_118167108_118167181	0.016875	SOX2.p2	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr10_+_28862429_28862444	0.0168706	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr6_-_76010231_76010363	0.0168494	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr12_+_43972732_43972732	0.0168356	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr10_-_123724698_123724802	0.0168067	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg18_v1_chr14_-_34414241_34414276	0.0167601	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr1_+_205736095_205736308	0.0167454	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr8_+_65655367_65655477	0.0167352	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg18_v1_chr3_-_95264349_95264520	0.0167185	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr8_-_103206310_103206310	0.016632	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg18_v1_chr22_-_30072217_30072314	0.0166139	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr10_-_93659164_93659237	0.0166121	SOX2.p2	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3	BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3	AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3	NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3
hg18_v1_chr7_+_116289833_116289911	0.0166108	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr17_-_7996409_7996482	0.0165996	SOX2.p2	AB088477|PER1|5187|period homolog 1 (Drosophila)	AF022991|PER1|5187|period homolog 1 (Drosophila)	AK291061|PER1|5187|period homolog 1 (Drosophila)	NM_002616|PER1|5187|period homolog 1 (Drosophila)
hg18_v1_chr19_+_45774626_45774631	0.0165883	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr17_+_43480724_43480779	0.0165858	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr2_-_47257083_47257116	0.0165725	SOX2.p2	CR604986|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg18_v1_chr20_-_33793507_33793590	0.0165713	SOX2.p2	BC008204|RBM39|9584|RNA binding motif protein 39	BC141835|RBM39|9584|RNA binding motif protein 39	BC158172|RBM39|9584|RNA binding motif protein 39	AK303910|RBM39|9584|RNA binding motif protein 39	AK297060|RBM39|9584|RNA binding motif protein 39	AL833168|RBM39|9584|RNA binding motif protein 39	CR619114|RBM39|9584|RNA binding motif protein 39	AK299165|RBM39|9584|RNA binding motif protein 39	CR749443|RBM39|9584|RNA binding motif protein 39	AK299678|RBM39|9584|RNA binding motif protein 39	BX640714|RBM39|9584|RNA binding motif protein 39	BX640812|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr15_+_72005875_72005880	0.0165645	SOX2.p2	CR618115|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr15_+_78483624_78483954	0.016551	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chrX_+_108666725_108666765	0.016468	SOX2.p2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr1_-_151333624_151333624	0.0164278	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr22_+_29807231_29807334	0.0164249	SOX2.p2	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg18_v1_chr1_+_32600384_32600448	0.0163778	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg18_v1_chr3_+_159310543_159310627	0.0163611	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr7_+_129634935_129634953	0.0163247	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg18_v1_chr11_+_60885983_60886316	0.0163096	SOX2.p2	NM_016464|TMEM138|51524|transmembrane protein 138	CR596588|TMEM138|51524|transmembrane protein 138
hg18_v1_chr7_-_35701253_35701276	0.0163008	SOX2.p2	BC020264|HERPUD2|64224|HERPUD family member 2	AK055708|HERPUD2|64224|HERPUD family member 2
hg18_v1_chrX_+_106030049_106030049	0.0162796	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg18_v1_chr19_-_47261761_47261796	0.0162621	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg18_v1_chr12_-_55686466_55686571	0.0162499	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg18_v1_chr3_+_103636548_103636566	0.0162208	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg18_v1_chr15_-_57013058_57013090	0.0162037	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr7_-_92585205_92585234	0.0161884	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg18_v1_chr17_-_4216359_4216561	0.016179	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR622319|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr1_-_78217360_78217366	0.0161661	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr3_-_47798347_47798362	0.0161494	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr2_-_171631728_171631728	0.0161251	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chrX_+_37735013_37735036	0.0160916	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg18_v1_chr1_+_63605912_63605925	0.016055	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chrX_+_55263515_55263570	0.0160226	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg18_v1_chr5_-_140033310_140033354	0.0160005	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg18_v1_chr10_-_105208634_105208637	0.0159924	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg18_v1_chr12_+_43896099_43896133	0.0159578	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg18_v1_chr3_+_198960820_198960820	0.0158833	SOX2.p2	AK303462|FYTTD1|84248|forty-two-three domain containing 1	NM_001011537|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr12_-_45052830_45052911	0.0158448	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chr14_-_20922001_20922018	0.0158384	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	CR616669|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr9_+_91115924_91116027	0.015775	SOX2.p2	CR621720|CKS2|1164|CDC28 protein kinase regulatory subunit 2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR601576|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg18_v1_chr3_-_166278969_166278976	0.0157501	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr18_-_71050034_71050166	0.0157197	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr3_+_73128667_73128695	0.0157101	SOX2.p2	BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	CR606592|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr2_+_114363919_114364115	0.0156464	SOX2.p2	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr12_+_52132176_52132244	0.0156297	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr5_+_109052984_109053008	0.0155989	SOX2.p2	
hg18_v1_chr16_-_54547443_54547443	0.0155275	SOX2.p2	AK294334|CES5A|221223|carboxylesterase 5A	NM_001190158|CES5A|221223|carboxylesterase 5A
hg18_v1_chr5_+_99899133_99899205	0.0155217	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chrX_-_73751185_73751194	0.0154903	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr20_-_33793593_33793675	0.0154799	SOX2.p2	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr16_+_31632065_31632068	0.0154414	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg18_v1_chr13_-_98708549_98708682	0.0154052	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr6_+_111386455_111386591	0.0154033	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg18_v1_chr19_-_58157832_58157935	0.0153928	SOX2.p2	BC105739|ZNF816|125893|zinc finger protein 816	BC105740|ZNF816|125893|zinc finger protein 816	BC105930|ZNF816|125893|zinc finger protein 816	AK316503|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough	AK291990|ZNF816|125893|zinc finger protein 816	BC063805|ZNF816|125893|zinc finger protein 816	NM_001031665|ZNF816|125893|zinc finger protein 816	CR749224|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough
hg18_v1_chr21_-_33935883_33936029	0.0153451	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr1_+_181075059_181075101	0.0153387	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr1_+_203463654_203463759	0.0153343	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr6_-_52968035_52968138	0.015329	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	CR599141|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	CR594939|GSTA4|2941|glutathione S-transferase alpha 4	CR625957|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg18_v1_chr15_-_42743124_42743148	0.0152757	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr21_+_16024241_16024583	0.0152559	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr14_+_56927066_56927105	0.0152537	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr13_-_93929719_93929936	0.0152318	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr6_+_118976134_118976183	0.0152174	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr22_+_42908612_42908689	0.0152024	SOX2.p2	CR619524|PARVG|64098|parvin, gamma
hg18_v1_chr14_+_20283938_20283967	0.0151821	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr15_+_71953020_71953103	0.0151633	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg18_v1_chr5_+_132456293_132456311	0.0151585	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr7_-_126679540_126679663	0.0151498	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr12_+_97433462_97433535	0.0151418	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg18_v1_chr17_-_53920699_53920797	0.0151153	SOX2.p2	BC115385|HSF5|124535|heat shock transcription factor family member 5	BC115386|HSF5|124535|heat shock transcription factor family member 5	BC033017|HSF5|124535|heat shock transcription factor family member 5	BC033020|HSF5|124535|heat shock transcription factor family member 5	NM_001080439|HSF5|124535|heat shock transcription factor family member 5
hg18_v1_chr9_+_135314907_135315013	0.0150981	SOX2.p2	NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7	NM_017586|C9orf7|11094|chromosome 9 open reading frame 7	AK075416|C9orf7|11094|chromosome 9 open reading frame 7	AK304524|C9orf7|11094|chromosome 9 open reading frame 7	AK074852|C9orf7|11094|chromosome 9 open reading frame 7	AK311325|C9orf7|11094|chromosome 9 open reading frame 7	AK296343|C9orf7|11094|chromosome 9 open reading frame 7	AK075548|C9orf7|11094|chromosome 9 open reading frame 7	BC030558|C9orf7|11094|chromosome 9 open reading frame 7	AJ011373|C9orf7|11094|chromosome 9 open reading frame 7	AY358452|C9orf7|11094|chromosome 9 open reading frame 7	AK298820|C9orf7|11094|chromosome 9 open reading frame 7
hg18_v1_chr10_-_69422391_69422437	0.0150958	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg18_v1_chr1_-_151549790_151549817	0.015086	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr8_+_144366442_144366517	0.0150769	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg18_v1_chrX_+_122923236_122923272	0.0150474	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr3_-_62334229_62334229	0.0150412	SOX2.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg18_v1_chr10_-_105100684_105100832	0.0150335	SOX2.p2	CR625113|PCGF6|84108|polycomb group ring finger 6	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr16_+_31632031_31632064	0.0149895	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg18_v1_chr3_-_184628548_184628719	0.0149819	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg18_v1_chr1_+_28936030_28936219	0.0149389	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	CR599207|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	CR593745|YTHDF2|51441|YTH domain family, member 2	CR595878|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr1_+_32777556_32777707	0.0149227	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr12_-_12310969_12311250	0.0149116	SOX2.p2	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr14_-_19992681_19992802	0.0149072	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR624248|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR614622|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR610109|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr7_+_116289827_116289828	0.0148852	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr8_+_133856793_133856855	0.0148535	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr1_-_59022275_59022372	0.0148423	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg18_v1_chr15_+_31390454_31390468	0.0148414	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3
hg18_v1_chr12_+_54080480_54080579	0.0147986	SOX2.p2	BC136897|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	BC136899|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	NM_001005518|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65
hg18_v1_chrX_+_108665665_108665676	0.0147753	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr10_-_76538859_76538981	0.0147713	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg18_v1_chr21_+_44002290_44002434	0.0147349	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg18_v1_chr6_-_53034445_53034538	0.0147256	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr7_-_139825602_139825660	0.014724	SOX2.p2	CR601180|MKRN1|23608|makorin ring finger protein 1	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr4_-_9727598_9727670	0.0146965	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg18_v1_chr5_-_146869811_146869828	0.0146825	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr3_+_9826643_9826643	0.0146628	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg18_v1_chr5_+_140541163_140541163	0.0146206	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg18_v1_chr1_+_190811479_190811584	0.0145866	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr1_-_1614040_1614114	0.0145791	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr7_-_104949787_104950008	0.0145068	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr16_-_74086779_74086782	0.0144978	SOX2.p2	
hg18_v1_chr2_-_203485193_203485193	0.0144916	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg18_v1_chr9_-_21218132_21218313	0.0144728	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg18_v1_chr2_+_160277219_160277263	0.0144591	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr14_-_106084085_106084503	0.0144577	SOX2.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr7_-_8268666_8268730	0.0144567	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr17_-_23721485_23721499	0.0144415	SOX2.p2	NM_000638|VTN|7448|vitronectin
hg18_v1_chr17_-_40380553_40380624	0.01442	SOX2.p2	NM_001080443|KIF18B|146909|kinesin family member 18B
hg18_v1_chr11_+_55554470_55554470	0.014418	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr5_-_138238877_138238886	0.0143268	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr1_+_183281173_183281321	0.0143055	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2	CR597914|RNF2|6045|ring finger protein 2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg18_v1_chr16_-_1772305_1772567	0.014276	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR622113|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR604082|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR596537|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR595592|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR592259|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR605628|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR610957|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR624932|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR591468|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr6_-_26305456_26305495	0.014274	SOX2.p2	DQ892795|HIST1H3D|8351|histone cluster 1, H3d	DQ896042|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr3_+_48931248_48931272	0.0142235	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr5_-_149446182_149446259	0.0142111	SOX2.p2	EU826593|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr1_+_224064427_224064474	0.0141974	SOX2.p2	CR593306|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR612904|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR625608|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr2_+_70168487_70168517	0.0141417	SOX2.p2	
hg18_v1_chr2_+_70168285_70168378	0.0141381	SOX2.p2	Z29505|PCBP1|5093|poly(rC) binding protein 1	X78137|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr1_-_159369081_159369101	0.0141222	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr1_+_168767864_168767990	0.0140347	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr1_-_183392776_183392847	0.0140304	SOX2.p2	AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr12_-_90100679_90100707	0.0139841	SOX2.p2	CR621501|DCN|1634|decorin	CR625941|DCN|1634|decorin	CR597299|DCN|1634|decorin	CR605408|DCN|1634|decorin	CR612130|DCN|1634|decorin	CR598428|DCN|1634|decorin	CR605283|DCN|1634|decorin	CR610969|DCN|1634|decorin	CR626006|DCN|1634|decorin
hg18_v1_chr6_-_152999678_152999793	0.0139838	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr17_-_53946899_53946983	0.0139824	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr8_+_30072463_30072507	0.0139793	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr16_-_73858179_73858207	0.0139371	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr5_+_57823017_57823086	0.0138775	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr12_+_132167512_132167542	0.0138764	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg18_v1_chr6_+_73133152_73133205	0.0138573	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr15_-_48434641_48434653	0.0138293	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr8_-_103945521_103945550	0.0138075	SOX2.p2	AK095493|AZIN1|51582|antizyme inhibitor 1	D88674|AZIN1|51582|antizyme inhibitor 1	BC013420|AZIN1|51582|antizyme inhibitor 1	BC019279|AZIN1|51582|antizyme inhibitor 1
hg18_v1_chr5_-_39238818_39238931	0.0137856	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg18_v1_chr3_-_47798279_47798307	0.0137032	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr9_+_35819208_35819279	0.01365	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	CR608738|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr9_+_83733162_83733221	0.0136427	SOX2.p2	NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4	AK125847|FAM75D4|389761|family with sequence similarity 75, member D4
hg18_v1_chr21_-_29179482_29179586	0.0136371	SOX2.p2	CR612892|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	CR620576|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg18_v1_chr16_-_67039874_67040091	0.0136273	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg18_v1_chr6_-_52549673_52549761	0.0136272	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr8_+_55691179_55691232	0.0136045	SOX2.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg18_v1_chr7_-_44854145_44854179	0.0135879	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg18_v1_chr5_+_121325554_121325626	0.013576	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg18_v1_chr7_+_44802834_44802848	0.013567	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR609623|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR613992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr16_+_65196031_65196119	0.0135633	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr12_+_67366989_67367072	0.0135346	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg18_v1_chr2_+_219141761_219141921	0.0135124	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg18_v1_chr6_-_30692995_30693001	0.0135033	SOX2.p2	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr17_+_24394281_24394369	0.0134878	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr12_-_56432377_56432383	0.0134786	SOX2.p2	CR597992|CDK4|1019|cyclin-dependent kinase 4	BC015669|CDK4|1019|cyclin-dependent kinase 4	CR609991|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr12_-_109390390_109390436	0.0134754	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr12_-_109390439_109390471	0.0134608	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	CR613385|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr5_+_162865128_162865315	0.0134552	SOX2.p2	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta	NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta	AB073390|MAT2B|27430|methionine adenosyltransferase II, beta	AL136664|MAT2B|27430|methionine adenosyltransferase II, beta	BC093030|MAT2B|27430|methionine adenosyltransferase II, beta	AK096178|MAT2B|27430|methionine adenosyltransferase II, beta	BC066645|MAT2B|27430|methionine adenosyltransferase II, beta	AM393097|MAT2B|27430|methionine adenosyltransferase II, beta	AM393737|MAT2B|27430|methionine adenosyltransferase II, beta	AF182814|MAT2B|27430|methionine adenosyltransferase II, beta	AF113225|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chrX_-_119550402_119550441	0.013436	SOX2.p2	CR603224|CUL4B|8450|cullin 4B
hg18_v1_chr12_-_55758814_55758818	0.0134356	SOX2.p2	AL833310|TMEM194A|23306|transmembrane protein 194A	AL833311|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr1_-_201422533_201422565	0.0134268	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr1_-_52117021_52117196	0.0134216	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr19_+_45774632_45774632	0.0134026	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr6_-_33864883_33864894	0.0133529	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg18_v1_chr1_+_183392991_183393047	0.013344	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr15_+_66133625_66133708	0.0132539	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr17_-_53950191_53950293	0.0132409	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr14_-_19992809_19992862	0.0132388	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr17_-_33043514_33043613	0.013224	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr1_-_24179419_24179539	0.0132063	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr15_-_23659962_23660025	0.0131912	SOX2.p2	AB051358|ATP10A|57194|ATPase, class V, type 10A
hg18_v1_chr3_+_73128629_73128665	0.0131837	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr19_+_18391211_18391240	0.013136	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4	BC000274|SSBP4|170463|single stranded DNA binding protein 4	CR608876|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg18_v1_chr4_-_41579325_41579348	0.0131008	SOX2.p2	
hg18_v1_chr8_-_33576907_33577026	0.0130833	SOX2.p2	CR591909|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR621684|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR604644|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR609273|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR616533|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr19_+_59705824_59705946	0.0130702	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg18_v1_chr19_-_57181862_57181914	0.0130616	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg18_v1_chr8_+_30072513_30072570	0.0130363	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR620833|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr1_-_201422436_201422448	0.0130151	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	CR602274|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr1_-_144322295_144322385	0.013014	SOX2.p2	CR605615|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr1_-_144322271_144322287	0.0130033	SOX2.p2	CR608817|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr1_-_166372244_166372247	0.0129811	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr5_+_60969392_60969392	0.0129157	SOX2.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr8_+_17824781_17824789	0.0129079	SOX2.p2	BC000453|PCM1|5108|pericentriolar material 1
hg18_v1_chr8_-_103735194_103735343	0.0129034	SOX2.p2	BC011538|KLF10|7071|Kruppel-like factor 10	NM_001032282|KLF10|7071|Kruppel-like factor 10	S81439|KLF10|7071|Kruppel-like factor 10
hg18_v1_chr1_+_151456683_151456683	0.0128783	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr12_+_67489063_67489073	0.012865	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr1_+_154449389_154449448	0.0128468	SOX2.p2	AK124646|PMF1|11243|polyamine-modulated factor 1	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	CR616631|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg18_v1_chr1_+_229731021_229731088	0.0128461	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg18_v1_chr7_-_27162688_27162853	0.0128407	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg18_v1_chr19_-_55709577_55709777	0.0128403	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg18_v1_chr12_-_56432375_56432375	0.0128371	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr18_-_3209986_3210105	0.0127792	SOX2.p2	AJ621424|MYOM1|8736|myomesin 1, 185kDa	AK125322|MYOM1|8736|myomesin 1, 185kDa	NM_003803|MYOM1|8736|myomesin 1, 185kDa	NM_019856|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr1_-_144322225_144322261	0.0127751	SOX2.p2	CR592330|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	CR613712|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr22_+_25398690_25398790	0.012731	SOX2.p2	AK026502|LOC388889|388889|hypothetical LOC388889
hg18_v1_chr10_-_27483144_27483283	0.0127266	SOX2.p2	CR611030|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr1_+_22176004_22176129	0.0126933	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg18_v1_chr7_-_148211533_148211559	0.0126787	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr12_-_120591938_120591942	0.0126433	SOX2.p2	CR610648|MORN3|283385|MORN repeat containing 3	BC057760|MORN3|283385|MORN repeat containing 3	NM_173855|MORN3|283385|MORN repeat containing 3
hg18_v1_chr12_-_56432385_56432445	0.0126142	SOX2.p2	CR622282|CDK4|1019|cyclin-dependent kinase 4	BC005864|CDK4|1019|cyclin-dependent kinase 4	CR602927|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr1_+_224317036_224317043	0.0125953	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr3_-_152541129_152541274	0.0125952	SOX2.p2	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg18_v1_chr14_-_20921925_20922000	0.012585	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr6_+_96132064_96132181	0.0125748	SOX2.p2	BX640869|MANEA|79694|mannosidase, endo-alpha	NM_024641|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg18_v1_chr10_+_102662675_102662856	0.0125537	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr4_+_109308126_109308140	0.012535	SOX2.p2	BC020624|LOC641518|641518|hypothetical LOC641518
hg18_v1_chr1_-_12830728_12830899	0.0125105	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr14_-_105279740_105279770	0.0125046	SOX2.p2	
hg18_v1_chr2_+_87828718_87828750	0.012476	SOX2.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chrX_-_74659810_74659877	0.0124655	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr1_+_10995265_10995330	0.0124593	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr6_+_72653126_72653172	0.0124576	SOX2.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr1_-_52116965_52116988	0.0124442	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr2_-_160277083_160277221	0.0124418	SOX2.p2	BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr1_+_92268072_92268224	0.0124306	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg18_v1_chr9_+_124551839_124551947	0.0124272	SOX2.p2	NM_001004453|OR1L6|392390|olfactory receptor, family 1, subfamily L, member 6
hg18_v1_chr1_+_86943103_86943182	0.0124136	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr10_+_98582005_98582082	0.0123851	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr17_+_39620108_39620179	0.012384	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR601571|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR600740|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR611823|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR601799|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr16_-_74086790_74086807	0.0123697	SOX2.p2	
hg18_v1_chr15_+_72005864_72005872	0.0123618	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr20_+_31219543_31219620	0.0123355	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr4_+_48038095_48038242	0.0123023	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg18_v1_chr19_+_2928480_2928652	0.0123021	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	CR607853|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg18_v1_chr9_-_99724559_99724672	0.01228	SOX2.p2	CR605882|C9orf156|51531|chromosome 9 open reading frame 156	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	CR620447|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	CR604210|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg18_v1_chr1_+_224317056_224317059	0.0122664	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr14_+_90650220_90650311	0.0122664	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr3_-_198960964_198960964	0.0122546	SOX2.p2	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr3_-_47798390_47798412	0.0122363	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr6_-_30763057_30763079	0.0122061	SOX2.p2	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr5_-_43432969_43432997	0.0122005	SOX2.p2	AK307307|CCL28|56477|chemokine (C-C motif) ligand 28
hg18_v1_chr10_-_105100880_105100887	0.0121994	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr11_+_61943082_61943143	0.0121943	SOX2.p2	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)
hg18_v1_chr1_+_24944554_24944631	0.0121867	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg18_v1_chr10_-_104252394_104252501	0.0121767	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr20_-_33793591_33793591	0.0121695	SOX2.p2	BX537770|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr3_-_47798372_47798376	0.0121567	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr11_-_18504939_18505072	0.0121442	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chr20_-_48980858_48981403	0.0120161	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg18_v1_chr2_+_70168407_70168436	0.0120055	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chrX_+_122923279_122923358	0.011942	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr4_-_40911212_40911440	0.0119262	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr5_-_10814179_10814340	0.0119155	SOX2.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chr18_-_22699650_22699717	0.0119021	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr1_-_1614005_1614031	0.0117892	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr13_-_102209422_102209422	0.011742	SOX2.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chr6_-_83832139_83832316	0.0116892	SOX2.p2	CR590287|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR604323|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR598717|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg18_v1_chr5_+_133479196_133479325	0.0116362	SOX2.p2	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)
hg18_v1_chr19_+_9295854_9296020	0.0115978	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript
hg18_v1_chr7_+_102502816_102502845	0.0115883	SOX2.p2	AK075500|ARMC10|83787|armadillo repeat containing 10	CR613788|ARMC10|83787|armadillo repeat containing 10	AK301565|ARMC10|83787|armadillo repeat containing 10	AK225082|ARMC10|83787|armadillo repeat containing 10	AK291818|ARMC10|83787|armadillo repeat containing 10	BC003586|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr1_-_1667123_1667353	0.0115692	SOX2.p2	BC062371|SLC35E2|9906|solute carrier family 35, member E2	CR591109|SLC35E2|9906|solute carrier family 35, member E2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr8_-_71146103_71146115	0.0115213	SOX2.p2	AF319458|PRDM14|63978|PR domain containing 14	AK022595|PRDM14|63978|PR domain containing 14	NM_024504|PRDM14|63978|PR domain containing 14
hg18_v1_chr15_+_76517532_76517621	0.0115038	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr3_-_47798381_47798382	0.011474	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr12_-_78831821_78831821	0.0114245	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr10_-_124595680_124595680	0.0114104	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg18_v1_chr22_-_30885200_30885308	0.0113939	SOX2.p2	BC139845|C22orf42|150297|chromosome 22 open reading frame 42	CR456485|C22orf42|150297|chromosome 22 open reading frame 42	NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42	BC040263|C22orf42|150297|chromosome 22 open reading frame 42
hg18_v1_chr8_-_133140808_133140808	0.0113616	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr5_+_61637822_61637857	0.0113575	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr6_-_52549774_52549847	0.0113488	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr5_-_134762791_134762810	0.0113367	SOX2.p2	CR597742|H2AFY|9555|H2A histone family, member Y	CR618845|H2AFY|9555|H2A histone family, member Y	CR600032|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr15_+_53488014_53488160	0.0113342	SOX2.p2	NM_001198784|FLJ27352|145788|hypothetical LOC145788	AK130862|FLJ27352|145788|hypothetical LOC145788	BX648577|FLJ27352|145788|hypothetical LOC145788
hg18_v1_chr6_+_88174408_88174462	0.0111708	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chr15_-_35179650_35180047	0.0110989	SOX2.p2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2	AK056216|MEIS2|4212|Meis homeobox 2
hg18_v1_chr10_-_27483285_27483310	0.0110889	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr1_+_234372454_234372545	0.0110635	SOX2.p2	BC012100|GPR137B|7107|G protein-coupled receptor 137B	NM_003272|GPR137B|7107|G protein-coupled receptor 137B	AK295408|GPR137B|7107|G protein-coupled receptor 137B	AK312908|GPR137B|7107|G protein-coupled receptor 137B	AK223632|GPR137B|7107|G protein-coupled receptor 137B	AK301552|GPR137B|7107|G protein-coupled receptor 137B	CR608564|GPR137B|7107|G protein-coupled receptor 137B	AF027826|GPR137B|7107|G protein-coupled receptor 137B	AY242135|GPR137B|7107|G protein-coupled receptor 137B	CR541770|GPR137B|7107|G protein-coupled receptor 137B
hg18_v1_chrX_+_24621964_24621978	0.0110531	SOX2.p2	BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr10_-_105100888_105100896	0.0110084	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr15_+_72005847_72005862	0.0110015	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chrX_+_24621984_24621988	0.0109845	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr14_+_37746937_37746954	0.0109538	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg18_v1_chr3_+_151747204_151747265	0.0109033	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr5_+_102493155_102493192	0.0108786	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg18_v1_chr16_+_57055717_57055809	0.0108781	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg18_v1_chr10_-_27483315_27483337	0.0108756	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr4_+_68107039_68107122	0.0108305	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr13_-_25693927_25694027	0.0108111	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr19_+_45774636_45774742	0.0107902	SOX2.p2	CR598538|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr6_+_43319199_43319214	0.010772	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg18_v1_chr1_-_201422368_201422433	0.010765	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr16_+_1068781_1068869	0.0107395	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg18_v1_chr16_+_30326864_30326977	0.0106751	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg18_v1_chr13_-_49597776_49597856	0.01066	SOX2.p2	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)
hg18_v1_chrX_+_70669636_70669665	0.0106345	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr8_+_17824772_17824779	0.0105691	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg18_v1_chr11_-_85053807_85053874	0.010495	SOX2.p2	BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor	NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor
hg18_v1_chr15_-_63185631_63185749	0.0104086	SOX2.p2	BC127916|LOC390595|390595|ubiquitin-associated protein 1-like	NM_001163692|LOC390595|390595|ubiquitin-associated protein 1-like
hg18_v1_chr1_+_224317030_224317035	0.0104073	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr14_+_80491461_80491777	0.0104056	SOX2.p2	BC024205|TSHR|7253|thyroid stimulating hormone receptor	NM_000369|TSHR|7253|thyroid stimulating hormone receptor	NM_001018036|TSHR|7253|thyroid stimulating hormone receptor	NM_001142626|TSHR|7253|thyroid stimulating hormone receptor	M31774|TSHR|7253|thyroid stimulating hormone receptor	BC108653|TSHR|7253|thyroid stimulating hormone receptor	BC009237|TSHR|7253|thyroid stimulating hormone receptor	M73747|TSHR|7253|thyroid stimulating hormone receptor	M32215|TSHR|7253|thyroid stimulating hormone receptor	BC063613|TSHR|7253|thyroid stimulating hormone receptor	AB209207|TSHR|7253|thyroid stimulating hormone receptor	BC120972|TSHR|7253|thyroid stimulating hormone receptor	BC120973|TSHR|7253|thyroid stimulating hormone receptor	BC127628|TSHR|7253|thyroid stimulating hormone receptor	BC127629|TSHR|7253|thyroid stimulating hormone receptor	BC141970|TSHR|7253|thyroid stimulating hormone receptor	S49816|TSHR|7253|thyroid stimulating hormone receptor	AY429111|TSHR|7253|thyroid stimulating hormone receptor	S45272|TSHR|7253|thyroid stimulating hormone receptor
hg18_v1_chrX_-_138742050_138742112	0.0103654	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr10_-_1769669_1769717	0.0102968	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg18_v1_chr5_+_180582880_180582895	0.0102827	SOX2.p2	AK027601|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr20_-_32728749_32728749	0.0102579	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr3_+_3816079_3816120	0.0102236	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg18_v1_chr3_+_48931276_48931299	0.0102204	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr5_+_149526533_149526630	0.0101577	SOX2.p2	NM_001804|CDX1|1044|caudal type homeobox 1	AF239666|CDX1|1044|caudal type homeobox 1	U51095|CDX1|1044|caudal type homeobox 1	BC096249|CDX1|1044|caudal type homeobox 1	BC096250|CDX1|1044|caudal type homeobox 1	BC096251|CDX1|1044|caudal type homeobox 1	BC096252|CDX1|1044|caudal type homeobox 1	BC127122|CDX1|1044|caudal type homeobox 1
hg18_v1_chr1_+_32251988_32252183	0.0101254	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr12_+_63849606_63849637	0.0100448	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg18_v1_chr18_+_75354312_75354424	0.0100281	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg18_v1_chr2_-_75791501_75791618	0.0100103	SOX2.p2	BC064559|C2orf3|6936|chromosome 2 open reading frame 3	BC000853|C2orf3|6936|chromosome 2 open reading frame 3	EF158467|C2orf3|6936|chromosome 2 open reading frame 3	EF158468|C2orf3|6936|chromosome 2 open reading frame 3	AB026911|C2orf3|6936|chromosome 2 open reading frame 3	NM_003203|C2orf3|6936|chromosome 2 open reading frame 3
hg18_v1_chr20_-_30794857_30794972	0.00997841	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg18_v1_chr6_-_31736488_31736545	0.00997505	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg18_v1_chr5_+_99898922_99899022	0.00996535	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	CR601145|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr16_-_47873183_47873287	0.00995345	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr19_+_46595558_46595562	0.00992459	SOX2.p2	CR620302|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr6_-_35764655_35764713	0.00985937	SOX2.p2	BC111050|FKBP5|2289|FK506 binding protein 5	AK222807|FKBP5|2289|FK506 binding protein 5	AK302704|FKBP5|2289|FK506 binding protein 5	AK303356|FKBP5|2289|FK506 binding protein 5	AK312422|FKBP5|2289|FK506 binding protein 5	BX647390|FKBP5|2289|FK506 binding protein 5	NM_001145776|FKBP5|2289|FK506 binding protein 5	AF194172|FKBP5|2289|FK506 binding protein 5	U71321|FKBP5|2289|FK506 binding protein 5	NM_001145777|FKBP5|2289|FK506 binding protein 5	NM_004117|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr9_-_35062643_35062738	0.00985936	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg18_v1_chr2_+_190357354_190357536	0.00983196	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr16_-_52295214_52295303	0.00982757	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr3_+_184454286_184454314	0.00980417	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr15_-_63068824_63068900	0.00976178	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr1_+_149897334_149897386	0.00975249	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg18_v1_chr5_-_142764295_142764424	0.0097446	SOX2.p2	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr1_-_152422282_152422282	0.00971513	SOX2.p2	BC073144|TPM3|7170|tropomyosin 3
hg18_v1_chr2_-_225073357_225073435	0.00970131	SOX2.p2	CR603582|CUL3|8452|cullin 3
hg18_v1_chr13_-_51922731_51922806	0.00968975	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr3_-_52287297_52287564	0.00965357	SOX2.p2	AY358264|WDR82|80335|WD repeat domain 82	BX648628|WDR82|80335|WD repeat domain 82	AK291380|WDR82|80335|WD repeat domain 82
hg18_v1_chr8_-_101227203_101227274	0.00963298	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg18_v1_chr4_-_17392232_17392232	0.00957983	SOX2.p2	AK308144|FAM184B|27146|family with sequence similarity 184, member B	NM_015688|FAM184B|27146|family with sequence similarity 184, member B
hg18_v1_chr3_+_151747266_151747286	0.00956594	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	CR601134|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr13_-_25693821_25693873	0.00953214	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr1_+_146824811_146824892	0.00951895	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg18_v1_chr11_+_118394703_118394717	0.00950446	SOX2.p2	CR599720|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr12_+_130945215_130945237	0.00948094	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg18_v1_chr1_-_144322291_144322294	0.0094797	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr7_+_116289765_116289821	0.00944351	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr14_+_61231795_61232091	0.00939577	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg18_v1_chr12_-_46439127_46439155	0.00935609	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr2_-_198008011_198008049	0.0093508	SOX2.p2	BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr15_+_92700167_92700459	0.00931917	SOX2.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg18_v1_chr1_-_52116994_52117012	0.00928734	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr17_+_38916758_38916888	0.00925051	SOX2.p2	AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg18_v1_chr16_-_69114931_69114960	0.00922955	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg18_v1_chr1_-_78217278_78217351	0.00922264	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr7_+_100047877_100048139	0.00920398	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3	CR608430|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr3_+_4510030_4510033	0.0091583	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr5_-_172976259_172976299	0.00913497	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr8_-_145136125_145136202	0.00912176	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr9_+_35819375_35819581	0.00910939	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr5_-_149772469_149772526	0.00910288	SOX2.p2	CR615386|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621994|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR595353|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR625117|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR622356|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR608107|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621213|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR601246|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR619151|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr19_+_60858230_60858282	0.00904099	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg18_v1_chr19_+_19487535_19487595	0.00901792	SOX2.p2	AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg18_v1_chr1_+_243065590_243065628	0.00901306	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr21_+_32585994_32585994	0.00899526	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr3_-_151746970_151747117	0.00898863	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg18_v1_chr14_+_90650720_90650840	0.00895794	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr5_-_168204430_168204444	0.00888424	SOX2.p2	
hg18_v1_chr5_+_96023479_96023535	0.00880935	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg18_v1_chr1_-_152422270_152422281	0.00879532	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	CR597930|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg18_v1_chr5_-_172976212_172976257	0.00875045	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr2_-_198007967_198007982	0.00874439	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr5_+_110455768_110455948	0.00862954	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg18_v1_chr14_+_66896813_66896822	0.0086241	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr1_-_67292286_67292443	0.00859106	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr2_+_70168064_70168133	0.00858351	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1	CR620735|PCBP1|5093|poly(rC) binding protein 1	CR624156|PCBP1|5093|poly(rC) binding protein 1	CR593186|PCBP1|5093|poly(rC) binding protein 1	CR596610|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr7_+_16533029_16533029	0.00856995	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr15_+_48434941_48435041	0.00855728	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr7_+_138675644_138675780	0.00855065	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg18_v1_chr15_-_48434677_48434692	0.00853114	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr21_-_30781537_30781625	0.00851719	SOX2.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg18_v1_chr11_+_111552298_111552332	0.00851111	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr5_-_149772563_149772724	0.00850271	SOX2.p2	CR590167|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr2_+_28828332_28828494	0.00844947	SOX2.p2	BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chr17_-_23721351_23721419	0.0084338	SOX2.p2	DQ893394|VTN|7448|vitronectin	DQ896716|VTN|7448|vitronectin	CR598384|VTN|7448|vitronectin	CR619020|VTN|7448|vitronectin	CR608327|VTN|7448|vitronectin	CR624874|VTN|7448|vitronectin	CR591115|VTN|7448|vitronectin	CR592341|VTN|7448|vitronectin	CR605180|VTN|7448|vitronectin	CR615135|VTN|7448|vitronectin	CR615837|VTN|7448|vitronectin	CR616509|VTN|7448|vitronectin	CR599706|VTN|7448|vitronectin	CR611315|VTN|7448|vitronectin	CR623310|VTN|7448|vitronectin	X03168|VTN|7448|vitronectin	CR620941|VTN|7448|vitronectin	CR601563|VTN|7448|vitronectin	CR619430|VTN|7448|vitronectin	CR594626|VTN|7448|vitronectin
hg18_v1_chr15_-_58558410_58558722	0.00838061	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr2_-_207738858_207738944	0.0083673	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr15_+_72005839_72005845	0.00836666	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr3_+_180763380_180763427	0.00829117	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	CR602120|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	CR597700|ACTL6A|86|actin-like 6A	CR613774|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg18_v1_chr17_-_23950171_23950198	0.00828621	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr6_+_31623331_31623367	0.00828324	SOX2.p2	AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg18_v1_chr6_+_167445284_167445284	0.00828179	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr19_+_57464635_57464657	0.00825013	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr19_-_54093749_54093807	0.00816187	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg18_v1_chr12_+_16391795_16391978	0.00812311	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	CR618561|MGST1|4257|microsomal glutathione S-transferase 1	CR609242|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg18_v1_chr19_+_46595563_46595584	0.00812264	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR595459|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR601175|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625376|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR591555|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR620134|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625203|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR612929|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592963|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592078|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626152|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR598478|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR604642|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR610394|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR618519|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592674|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr3_+_157071173_157071353	0.00809303	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr19_+_46595533_46595556	0.0080896	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626469|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr19_+_45774620_45774622	0.00803637	SOX2.p2	CR590661|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr20_-_30703219_30703443	0.0080323	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg18_v1_chr14_+_66896795_66896811	0.00801753	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr1_+_64012154_64012341	0.00800428	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg18_v1_chr7_-_44854183_44854186	0.00797866	SOX2.p2	CR602318|H2AFV|94239|H2A histone family, member V
hg18_v1_chr17_-_23950142_23950165	0.00796602	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr3_+_185520744_185520900	0.00794485	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr1_+_199108705_199108788	0.00793692	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg18_v1_chrX_+_151860870_151860900	0.00792842	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chr5_+_109053034_109053054	0.00787432	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr6_-_33864863_33864875	0.00786706	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg18_v1_chr11_-_60886038_60886415	0.0078389	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr12_-_43556899_43556899	0.00781165	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr3_+_173954940_173955053	0.00777621	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr12_-_11178109_11178109	0.00775938	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg18_v1_chr10_+_129237602_129237602	0.00775586	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr19_-_47790820_47790921	0.00775178	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg18_v1_chr14_-_104332895_104332940	0.00774632	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chrX_+_119268713_119268724	0.00774377	SOX2.p2	
hg18_v1_chr17_+_77261477_77261501	0.00766821	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr1_-_244647333_244647336	0.00765191	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr1_-_85514580_85514867	0.00759539	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg18_v1_chr1_-_174442736_174442840	0.0075897	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr12_+_103375116_103375318	0.00758657	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg18_v1_chr12_+_97433545_97433601	0.00757587	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg18_v1_chr6_+_157141565_157141570	0.00755302	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr1_+_184532027_184532033	0.00749386	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr12_+_47584159_47584220	0.00749365	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg18_v1_chr8_-_145132582_145132622	0.00747218	SOX2.p2	AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr12_+_132167551_132167669	0.00747093	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	CR601967|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg18_v1_chr13_+_33290205_33290250	0.00742567	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr9_+_134896194_134896224	0.0074	SOX2.p2	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa
hg18_v1_chr13_+_31318828_31318977	0.00739993	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg18_v1_chr20_+_29931257_29931292	0.00739283	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg18_v1_chr12_+_5473558_5473641	0.00738767	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr2_+_201384904_201384907	0.00735473	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr12_+_58369392_58369421	0.00735028	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg18_v1_chr3_-_185218311_185218459	0.00732192	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR619835|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR590924|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg18_v1_chr3_-_123617571_123617644	0.00727527	SOX2.p2	BC025762|WDR5B|54554|WD repeat domain 5B	NM_019069|WDR5B|54554|WD repeat domain 5B	CR592490|WDR5B|54554|WD repeat domain 5B
hg18_v1_chr17_+_77261457_77261475	0.00727472	SOX2.p2	
hg18_v1_chr3_-_52779911_52780035	0.00725502	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg18_v1_chr7_-_44854188_44854200	0.00723048	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg18_v1_chrX_+_119268518_119268711	0.00720352	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg18_v1_chr2_+_66516020_66516035	0.00720108	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg18_v1_chr4_-_44423275_44423368	0.007165	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg18_v1_chr11_-_45896144_45896249	0.00713872	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg18_v1_chr1_+_78217510_78217611	0.00712407	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr17_+_35038276_35038299	0.00705872	SOX2.p2	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B
hg18_v1_chr1_+_10413016_10413144	0.00705765	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chrX_-_74660024_74660061	0.00704698	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr1_+_42920946_42921397	0.00701483	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr9_+_122890394_122890425	0.0070074	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr3_+_198961160_198961246	0.00700057	SOX2.p2	AL136558|FYTTD1|84248|forty-two-three domain containing 1	AK315019|FYTTD1|84248|forty-two-three domain containing 1	AJ344094|FYTTD1|84248|forty-two-three domain containing 1	AK296283|FYTTD1|84248|forty-two-three domain containing 1	AM393053|FYTTD1|84248|forty-two-three domain containing 1	CR533502|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr19_-_46595053_46595212	0.0069941	SOX2.p2	CR620099|EXOSC5|56915|exosome component 5	CR592651|EXOSC5|56915|exosome component 5	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	CR621752|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg18_v1_chr19_+_38263625_38263625	0.00696366	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chr17_+_64922420_64922522	0.00695648	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR616398|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR624804|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR625265|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR604345|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr14_-_105279582_105279607	0.00695553	SOX2.p2	
hg18_v1_chrX_+_70232362_70233103	0.00694274	SOX2.p2	CR596165|FOXO4|4303|forkhead box O4	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg18_v1_chr4_+_1693031_1693101	0.00693091	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg18_v1_chr19_+_3958690_3958768	0.0069116	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg18_v1_chr7_-_124192916_124193149	0.00690474	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg18_v1_chr18_-_62422195_62422388	0.00689842	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg18_v1_chr16_-_65775326_65775400	0.00689613	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg18_v1_chr12_+_102982365_102982468	0.00687136	SOX2.p2	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg18_v1_chr17_+_63462347_63462394	0.00686249	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR606537|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr17_+_63252668_63252691	0.00685208	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chrX_-_10548458_10548673	0.00684943	SOX2.p2	AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)	AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)	Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)	BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr2_-_234317362_234317399	0.00684689	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr6_-_79844618_79844656	0.00681593	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr1_-_224563820_224563820	0.00680938	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr17_-_53964360_53964362	0.00680666	SOX2.p2	BC018055|SEPT4|5414|septin 4
hg18_v1_chr2_-_241408296_241408397	0.00680108	SOX2.p2	NM_004321|KIF1A|547|kinesin family member 1A	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A
hg18_v1_chr7_-_139825693_139825785	0.00677989	SOX2.p2	CR605455|MKRN1|23608|makorin ring finger protein 1	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	CR625460|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr6_-_13922525_13922969	0.00677067	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chrX_-_74659572_74659590	0.00670472	SOX2.p2	
hg18_v1_chr18_+_19973445_19973448	0.00670156	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg18_v1_chr20_-_30795035_30795057	0.00659196	SOX2.p2	BC047440|COMMD7|149951|COMM domain containing 7
hg18_v1_chr9_-_32542573_32542632	0.0065774	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr20_+_25336320_25336325	0.00655753	SOX2.p2	BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr13_-_106018445_106018528	0.00654975	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg18_v1_chr12_+_132167057_132167119	0.00652206	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg18_v1_chr3_+_73193499_73193499	0.00648426	SOX2.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chr18_+_71127246_71127414	0.00647171	SOX2.p2	AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1	BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1
hg18_v1_chr9_+_131974506_131974763	0.0064489	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr3_+_10043139_10043182	0.00644874	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr14_+_66896824_66896829	0.00643675	SOX2.p2	CR618395|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr11_+_111551417_111551688	0.00641384	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr3_-_114047479_114047486	0.0063973	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr9_+_109086154_109086220	0.00635806	SOX2.p2	AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr1_+_224064365_224064425	0.00635606	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr1_-_175400665_175400731	0.00633609	SOX2.p2	AK309094|ASTN1|460|astrotactin 1
hg18_v1_chr9_-_32542550_32542568	0.00633252	SOX2.p2	AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr8_-_33577033_33577042	0.00631094	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr5_-_1397941_1398104	0.00627836	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg18_v1_chr19_+_45546369_45546492	0.00621086	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr14_+_68796621_68796760	0.00618875	SOX2.p2	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg18_v1_chr9_+_124463665_124463815	0.00618531	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg18_v1_chr17_+_56032271_56032381	0.00618027	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr4_+_38341982_38342461	0.00617837	SOX2.p2	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr14_-_66896167_66896472	0.00613405	SOX2.p2	CR598234|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR614271|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR591270|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR590079|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR619369|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR621010|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR600453|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR613083|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR626788|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR603153|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg18_v1_chr1_+_86943074_86943100	0.00604783	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr12_-_55405577_55405594	0.00604334	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg18_v1_chr16_-_67977041_67977232	0.00603512	SOX2.p2	U95970|TERF2|7014|telomeric repeat binding factor 2
hg18_v1_chr1_-_102235377_102235380	0.00600946	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg18_v1_chr1_-_52116894_52116948	0.00600445	SOX2.p2	AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr1_-_153480980_153481276	0.00594006	SOX2.p2	AK311242|GBA|2629|glucosidase, beta, acid	CR616044|GBA|2629|glucosidase, beta, acid	CR609535|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg18_v1_chr15_+_91248706_91248823	0.00583634	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr1_+_117404432_117404462	0.00578653	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr11_-_1586190_1586268	0.00577377	SOX2.p2	AY597812|KRTAP5-3|387266|keratin associated protein 5-3	AB126072|KRTAP5-3|387266|keratin associated protein 5-3	NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3
hg18_v1_chr19_-_2668272_2668427	0.00577296	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg18_v1_chr22_-_49363209_49363371	0.00572608	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg18_v1_chr19_-_22171592_22171592	0.00571567	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg18_v1_chr21_-_42608774_42608829	0.00571186	SOX2.p2	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)	AF432265|TFF3|7033|trefoil factor 3 (intestinal)
hg18_v1_chr8_+_18072250_18072250	0.00561501	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg18_v1_chr17_+_77261401_77261427	0.0056105	SOX2.p2	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr3_+_10043123_10043129	0.00555222	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr11_-_10630408_10630498	0.00549743	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr14_+_66896783_66896789	0.00549555	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR598254|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR601355|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr4_-_157006827_157006874	0.00541946	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr11_+_55335418_55335518	0.00541725	SOX2.p2	BC136939|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109249|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109250|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	NM_001004738|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1
hg18_v1_chr7_+_93373755_93373755	0.00538475	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg18_v1_chr12_+_100795480_100795698	0.0053595	SOX2.p2	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1	AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr2_+_70168200_70168215	0.00533184	SOX2.p2	CR613158|PCBP1|5093|poly(rC) binding protein 1	U24223|PCBP1|5093|poly(rC) binding protein 1	CR618539|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr5_+_1854493_1854531	0.00533096	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg18_v1_chr10_-_17211795_17211884	0.00531611	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg18_v1_chr5_-_142764168_142764282	0.00530363	SOX2.p2	AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr20_+_9443426_9443499	0.00529654	SOX2.p2	CR612846|C20orf103|24141|chromosome 20 open reading frame 103
hg18_v1_chr6_-_28294642_28294869	0.00529314	SOX2.p2	AK292767|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC050562|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC015543|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC039027|LOC222699|222699|transducer of ERBB2, 2 pseudogene
hg18_v1_chr3_-_36961539_36961610	0.00528541	SOX2.p2	NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1
hg18_v1_chr16_-_74024750_74024903	0.00528318	SOX2.p2	BT009819|CFDP1|10428|craniofacial development protein 1	CR542111|CFDP1|10428|craniofacial development protein 1	DQ890998|CFDP1|10428|craniofacial development protein 1	EU176574|CFDP1|10428|craniofacial development protein 1	AK313948|CFDP1|10428|craniofacial development protein 1	CR622718|CFDP1|10428|craniofacial development protein 1	CR626586|CFDP1|10428|craniofacial development protein 1	AB009285|CFDP1|10428|craniofacial development protein 1	D85939|CFDP1|10428|craniofacial development protein 1	CR623318|CFDP1|10428|craniofacial development protein 1	BC000991|CFDP1|10428|craniofacial development protein 1	NM_006324|CFDP1|10428|craniofacial development protein 1	AK226031|CFDP1|10428|craniofacial development protein 1
hg18_v1_chr5_+_140509803_140510022	0.0052824	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg18_v1_chr2_-_190357241_190357317	0.00527366	SOX2.p2	CR620006|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr1_-_156937065_156937109	0.00526649	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chr15_+_20507195_20507195	0.00524515	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr7_+_80145461_80145547	0.00524345	SOX2.p2	CR604329|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr17_-_24302450_24302462	0.00519806	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg18_v1_chr21_-_46529663_46529703	0.00519221	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg18_v1_chr14_-_22516271_22516271	0.00514892	SOX2.p2	AK096128|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_198086|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr8_-_144313100_144313129	0.00514523	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr1_+_224477941_224478005	0.00513056	SOX2.p2	BC111974|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC113441|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC143784|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	AF211891|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	NM_031944|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)
hg18_v1_chr6_+_152053323_152053425	0.0051	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr7_-_44854222_44854281	0.00506345	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg18_v1_chr4_-_47678187_47678306	0.00503866	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr5_+_180582905_180582911	0.00503587	SOX2.p2	NM_033549|TRIM41|90933|tripartite motif containing 41	NM_201627|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr19_+_11859609_11859738	0.0050262	SOX2.p2	BC051309|ZNF69|7620|zinc finger protein 69	NM_021915|ZNF69|7620|zinc finger protein 69	EU446913|ZNF69|7620|zinc finger protein 69
hg18_v1_chr3_-_127258299_127258307	0.00501016	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr1_-_178100204_178100211	0.00499826	SOX2.p2	
hg18_v1_chr16_+_66464425_66464468	0.00497722	SOX2.p2	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr16_+_30326386_30326699	0.00497155	SOX2.p2	BC026192|ZNF771|51333|zinc finger protein 771	BC011870|ZNF771|51333|zinc finger protein 771
hg18_v1_chr6_+_31815703_31815845	0.00495261	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6ORF26|100532732|MSH5-C6orf26 read-through transcript	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg18_v1_chr10_+_85889164_85889311	0.00492595	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	CR613304|GHITM|27069|growth hormone inducible transmembrane protein	CR618105|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein	CR607970|GHITM|27069|growth hormone inducible transmembrane protein
hg18_v1_chr6_+_127706189_127706320	0.0049001	SOX2.p2	
hg18_v1_chr12_+_68923043_68923076	0.00488574	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg18_v1_chr5_-_134762814_134762826	0.00488502	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	CR607903|H2AFY|9555|H2A histone family, member Y	CR622086|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_-_52293634_52293634	0.00486111	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr10_-_128067052_128067056	0.00481868	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr15_-_88256922_88257296	0.00479548	SOX2.p2	AK093274|C15orf38|348110|chromosome 15 open reading frame 38	AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	BC053602|C15orf38|348110|chromosome 15 open reading frame 38	CR618861|C15orf38|348110|chromosome 15 open reading frame 38	NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	NM_182616|C15orf38|348110|chromosome 15 open reading frame 38
hg18_v1_chr5_+_96023627_96023742	0.00477301	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg18_v1_chr3_+_42176662_42176857	0.0047594	SOX2.p2	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1	NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1	BC015922|TRAK1|22906|trafficking protein, kinesin binding 1	AK000754|TRAK1|22906|trafficking protein, kinesin binding 1	AM392573|TRAK1|22906|trafficking protein, kinesin binding 1	AM393596|TRAK1|22906|trafficking protein, kinesin binding 1	EU446989|TRAK1|22906|trafficking protein, kinesin binding 1
hg18_v1_chr6_+_99979490_99979580	0.00474483	SOX2.p2	
hg18_v1_chr7_-_26206845_26206888	0.00473006	SOX2.p2	BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr20_+_33667160_33667339	0.00469089	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg18_v1_chr19_-_44920451_44920507	0.00467191	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chr7_-_26206889_26206890	0.00464473	SOX2.p2	AK129839|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	AK289429|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr19_+_9334695_9334695	0.00462222	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr1_+_44451698_44451762	0.00460196	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg18_v1_chr20_+_56989690_56989714	0.00456547	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	CR616677|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr1_-_159369041_159369061	0.00455693	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr18_-_3209846_3209875	0.00447886	SOX2.p2	BC116183|MYOM1|8736|myomesin 1, 185kDa	BC116184|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr1_+_243199906_243200064	0.00446012	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr5_-_54639158_54639279	0.00445379	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr20_-_34005799_34005876	0.00444516	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_016558|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr15_+_48434397_48434507	0.00442199	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr14_+_19993545_19993644	0.0043633	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr6_-_90119329_90119684	0.00435808	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr17_-_71580117_71580170	0.00433242	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr2_-_162639297_162639308	0.00433133	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr8_-_144313053_144313076	0.00431238	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr6_-_105414475_105414488	0.00431102	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr15_-_84139182_84139216	0.00429372	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr5_+_55069601_55069665	0.00420079	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr3_+_195336625_195336630	0.00420072	SOX2.p2	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	BC005178|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg18_v1_chr11_-_65962836_65962889	0.00419589	SOX2.p2	CR600024|MRPL11|65003|mitochondrial ribosomal protein L11	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	CR622463|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg18_v1_chr13_+_31503436_31503446	0.00417747	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg18_v1_chr3_-_129023850_129024390	0.0041518	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr9_-_89939719_89939719	0.00409931	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg18_v1_chr19_+_63262418_63262480	0.00409549	SOX2.p2	AK098011|ZNF135|7694|zinc finger protein 135	NM_001164527|ZNF135|7694|zinc finger protein 135	NM_001164529|ZNF135|7694|zinc finger protein 135	NM_001164530|ZNF135|7694|zinc finger protein 135	NM_003436|ZNF135|7694|zinc finger protein 135	NM_007134|ZNF135|7694|zinc finger protein 135	AK297226|ZNF135|7694|zinc finger protein 135	BC046434|ZNF135|7694|zinc finger protein 135	AK295110|ZNF135|7694|zinc finger protein 135	BX647775|ZNF135|7694|zinc finger protein 135	AK094202|ZNF135|7694|zinc finger protein 135	AL833637|ZNF135|7694|zinc finger protein 135
hg18_v1_chr18_-_52456655_52456835	0.00406904	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	CR615108|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr1_-_223683141_223683141	0.00403682	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr1_+_93686154_93686466	0.00401593	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg18_v1_chr1_-_31485320_31485324	0.00401157	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr3_+_9451506_9451527	0.00397539	SOX2.p2	
hg18_v1_chr12_+_119647953_119648071	0.00396719	SOX2.p2	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR596637|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR608104|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR615642|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR613518|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR600438|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR607224|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR606773|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR604877|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg18_v1_chr14_-_103098326_103098411	0.00396247	SOX2.p2	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chrX_-_74659596_74659604	0.0039432	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chrX_-_19918958_19919101	0.0039278	SOX2.p2	AY092822|LOC729609|729609|hypothetical LOC729609
hg18_v1_chr3_+_195688974_195689208	0.0038836	SOX2.p2	AK091527|FLJ34208|401106|hypothetical LOC401106
hg18_v1_chr9_-_34610483_34610488	0.00388127	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr3_-_52248182_52248222	0.00384528	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR611569|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR593060|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR613911|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR602270|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR600187|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR607625|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR626408|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR596947|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR614000|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg18_v1_chr14_-_94306104_94306251	0.00379964	SOX2.p2	BC063580|GSC|145258|goosecoid homeobox	AY177407|GSC|145258|goosecoid homeobox	NM_173849|GSC|145258|goosecoid homeobox
hg18_v1_chr6_-_30748760_30748808	0.00378668	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr4_-_44348414_44348414	0.00378106	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr12_+_122762835_122762863	0.00376052	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr6_-_26307418_26307499	0.00375	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr12_-_122322117_122322775	0.00374005	SOX2.p2	DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR604217|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR598800|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1
hg18_v1_chr17_-_1534880_1534928	0.00372941	SOX2.p2	BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg18_v1_chr5_+_180726874_180726893	0.00372322	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr17_+_77261440_77261446	0.0037088	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chrX_+_48934831_48934838	0.00369033	SOX2.p2	
hg18_v1_chr1_+_160734259_160734414	0.00367623	SOX2.p2	AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr14_+_78815406_78815508	0.00367529	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg18_v1_chr1_+_165075345_165075394	0.00365672	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr20_+_60311419_60311441	0.00362643	SOX2.p2	NM_007002|ADRM1|11047|adhesion regulating molecule 1	NM_175573|ADRM1|11047|adhesion regulating molecule 1	CR601588|ADRM1|11047|adhesion regulating molecule 1	CR603214|ADRM1|11047|adhesion regulating molecule 1	CR591215|ADRM1|11047|adhesion regulating molecule 1	CR608688|ADRM1|11047|adhesion regulating molecule 1	CR624663|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr17_-_7106497_7106523	0.0036134	SOX2.p2	CR611223|CLDN7|1366|claudin 7	CR594337|CLDN7|1366|claudin 7	BC001055|CLDN7|1366|claudin 7	AK313958|CLDN7|1366|claudin 7	CR607084|CLDN7|1366|claudin 7
hg18_v1_chr14_-_50068928_50069192	0.00351461	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr16_+_30993223_30993247	0.003503	SOX2.p2	NM_014699|ZNF646|9726|zinc finger protein 646	AK304808|ZNF646|9726|zinc finger protein 646
hg18_v1_chr2_-_3583793_3583799	0.00349371	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chr22_+_40724674_40724768	0.00348615	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg18_v1_chr3_+_10043097_10043121	0.00347568	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr1_+_1104939_1104972	0.00345177	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr8_-_18585721_18585904	0.00344901	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr14_+_66896830_66896838	0.00341933	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR600389|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR604321|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr2_+_45022540_45022561	0.00340474	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg18_v1_chr4_-_176970895_176970905	0.00335187	SOX2.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg18_v1_chrX_+_122821217_122822029	0.00334232	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr16_+_10745174_10745317	0.00331827	SOX2.p2	AK310089|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	NM_002484|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK307148|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK223204|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC100290|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR600910|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR613650|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109322|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109323|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR622882|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR601815|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)
hg18_v1_chr5_-_96504258_96504331	0.00329426	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr2_+_70168238_70168264	0.0032793	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1	CR600333|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr8_-_95634845_95634921	0.00326207	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429
hg18_v1_chr12_+_54316910_54316942	0.00325655	SOX2.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr6_-_105414401_105414435	0.00323822	SOX2.p2	AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr14_+_44674892_44674892	0.00323638	SOX2.p2	AK093422|FANCM|57697|Fanconi anemia, complementation group M
hg18_v1_chr6_-_105414440_105414471	0.0032243	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr8_+_17824790_17824816	0.00321943	SOX2.p2	BC065022|PCM1|5108|pericentriolar material 1	BC027477|PCM1|5108|pericentriolar material 1	BC140946|PCM1|5108|pericentriolar material 1
hg18_v1_chr9_-_127043436_127043453	0.00321197	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr6_-_166502119_166502120	0.00321094	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr7_+_139124502_139124515	0.00319286	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr2_+_70168218_70168227	0.00316775	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr4_-_39655944_39656032	0.00315079	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr6_+_170457705_170457761	0.0031202	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr3_+_14964080_14964239	0.00311302	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr12_-_56432292_56432374	0.00310606	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	CR591116|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	CR598582|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4	CR590586|CDK4|1019|cyclin-dependent kinase 4	CR616342|CDK4|1019|cyclin-dependent kinase 4	CR608247|CDK4|1019|cyclin-dependent kinase 4	CR594194|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr5_+_96296842_96296856	0.00307095	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr1_+_166461881_166461953	0.00304892	SOX2.p2	BC068098|SFT2D2|375035|SFT2 domain containing 2
hg18_v1_chr9_-_122382079_122382270	0.00304813	SOX2.p2	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2
hg18_v1_chr15_-_48434567_48434617	0.00304163	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr4_-_166253453_166253497	0.00303836	SOX2.p2	CR590819|TMEM192|201931|transmembrane protein 192	NM_001100389|TMEM192|201931|transmembrane protein 192
hg18_v1_chr9_-_115142354_115142440	0.00301679	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg18_v1_chr2_-_3583724_3583784	0.00300522	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg18_v1_chr1_-_150862202_150862202	0.0029872	SOX2.p2	AB528786|LCE3A|353142|late cornified envelope 3A	BC120933|LCE3A|353142|late cornified envelope 3A	BC120934|LCE3A|353142|late cornified envelope 3A	NM_178431|LCE3A|353142|late cornified envelope 3A
hg18_v1_chr17_-_59172852_59172895	0.00298475	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	CR601658|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg18_v1_chr8_-_38245694_38245932	0.00298414	SOX2.p2	CR591117|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606207|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR597379|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606143|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B
hg18_v1_chr4_-_87500201_87500239	0.00289695	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr5_+_61637701_61637759	0.00286488	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr12_-_54938385_54938447	0.00282832	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr16_+_65620536_65620560	0.00278679	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr15_-_40570585_40570648	0.00275437	SOX2.p2	AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg18_v1_chr3_+_134985566_134985566	0.00274924	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chr7_-_50103335_50103405	0.00274444	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg18_v1_chr4_+_48180033_48180335	0.00274384	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg18_v1_chr22_+_23945611_23945611	0.00274044	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg18_v1_chr6_-_30748597_30748759	0.00273666	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr4_-_158111995_158112023	0.00271101	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr13_-_51631996_51631996	0.0027093	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr22_-_29197944_29198033	0.00268792	SOX2.p2	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)
hg18_v1_chr7_-_93471463_93471638	0.00267968	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR605582|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR601371|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg18_v1_chr8_-_144313293_144313427	0.00267507	SOX2.p2	AK314139|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001130478|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr12_+_100795213_100795286	0.00265871	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr12_-_120218926_120219091	0.00264096	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr2_-_104834344_104834352	0.00263014	SOX2.p2	AK096498|LOC100506421|100506421|hypothetical LOC100506421
hg18_v1_chr2_-_2314087_2314096	0.00261445	SOX2.p2	AK307797|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr17_-_23721468_23721480	0.00260784	SOX2.p2	CR625072|VTN|7448|vitronectin
hg18_v1_chr20_+_60311469_60311473	0.00258679	SOX2.p2	CR616656|ADRM1|11047|adhesion regulating molecule 1	CR604310|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr18_+_70134089_70134089	0.00258175	SOX2.p2	CR749350|DKFZP781G0119|644041|hypothetical protein LOC644041	NM_001174123|DKFZP781G0119|644041|hypothetical protein LOC644041
hg18_v1_chr8_-_87590097_87590127	0.00257552	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg18_v1_chr14_-_20922264_20922264	0.00253849	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr19_-_49725387_49725387	0.00248052	SOX2.p2	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20
hg18_v1_chr3_-_10042989_10043077	0.00241205	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg18_v1_chr16_+_66398477_66398563	0.00238488	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg18_v1_chr3_+_143824955_143825033	0.00238005	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg18_v1_chr19_+_54299686_54299780	0.00236823	SOX2.p2	CR613069|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)
hg18_v1_chr6_+_134800533_134800550	0.00236781	SOX2.p2	AK055166|LOC154092|154092|hypothetical LOC154092
hg18_v1_chr22_+_18091065_18091070	0.00235106	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg18_v1_chr6_-_39390073_39390214	0.00234187	SOX2.p2	AF358910|KCNK17|89822|potassium channel, subfamily K, member 17	DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17	DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17	EU978944|KCNK17|89822|potassium channel, subfamily K, member 17	CR622971|KCNK17|89822|potassium channel, subfamily K, member 17	BC025726|KCNK17|89822|potassium channel, subfamily K, member 17	AY358853|KCNK17|89822|potassium channel, subfamily K, member 17	CR626629|KCNK17|89822|potassium channel, subfamily K, member 17	AF339912|KCNK17|89822|potassium channel, subfamily K, member 17	AK310582|KCNK17|89822|potassium channel, subfamily K, member 17	AK315273|KCNK17|89822|potassium channel, subfamily K, member 17	NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17	CR613884|KCNK17|89822|potassium channel, subfamily K, member 17	NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17
hg18_v1_chr11_-_111255354_111255390	0.00234144	SOX2.p2	AK302630|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg18_v1_chr17_-_17125314_17125346	0.00234141	SOX2.p2	BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR600698|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR616766|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr6_-_108385905_108385995	0.00233755	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr8_-_21701616_21701861	0.00233571	SOX2.p2	AY326396|GFRA2|2675|GDNF family receptor alpha 2	AY941828|GFRA2|2675|GDNF family receptor alpha 2	U93703|GFRA2|2675|GDNF family receptor alpha 2	AF002700|GFRA2|2675|GDNF family receptor alpha 2	AK299623|GFRA2|2675|GDNF family receptor alpha 2	U97145|GFRA2|2675|GDNF family receptor alpha 2
hg18_v1_chr20_+_56989717_56989772	0.00233334	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	CR615187|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr3_+_52694975_52695148	0.00233173	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR607914|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR598596|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR608648|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg18_v1_chr10_+_104211134_104211147	0.00232067	SOX2.p2	AK296583|TMEM180|79847|transmembrane protein 180
hg18_v1_chr19_+_62483093_62483243	0.00231778	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr12_+_6950204_6950336	0.00224794	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr11_-_107235123_107235123	0.00224719	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr17_-_1534848_1534868	0.00223671	SOX2.p2	AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg18_v1_chr14_+_92459197_92459197	0.00222156	SOX2.p2	NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)
hg18_v1_chr1_-_152422261_152422264	0.00221213	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3	CR589996|TPM3|7170|tropomyosin 3
hg18_v1_chr11_+_63463009_63463111	0.00219854	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg18_v1_chr15_-_97608922_97608957	0.00218886	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr17_+_55052185_55052270	0.00217708	SOX2.p2	
hg18_v1_chr1_-_154988647_154988863	0.00214345	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr17_-_44047299_44047299	0.00213921	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg18_v1_chr7_-_2561853_2561930	0.00213202	SOX2.p2	AK131083|BAAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BAAT1|221927|BRCA1-associated ATM activator 1
hg18_v1_chr9_-_34610460_34610482	0.00213091	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr3_+_128830656_128830788	0.002121	SOX2.p2	CR604786|PODXL2|50512|podocalyxin-like 2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2	CR596999|PODXL2|50512|podocalyxin-like 2
hg18_v1_chr16_+_65195435_65195560	0.00208173	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr9_-_35062596_35062636	0.00207246	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg18_v1_chr20_+_33506322_33506655	0.00203656	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg18_v1_chr19_+_46507872_46507976	0.0020181	SOX2.p2	BC011577|CCDC97|90324|coiled-coil domain containing 97	NM_052848|CCDC97|90324|coiled-coil domain containing 97
hg18_v1_chr6_-_35764588_35764608	0.00201252	SOX2.p2	HM245391|FKBP5|2289|FK506 binding protein 5	AB209893|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr3_+_23961739_23961899	0.00199908	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr13_+_112349358_112349358	0.00199592	SOX2.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr22_-_40414765_40414858	0.00199252	SOX2.p2	CR616990|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR623174|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR605954|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR616994|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593004|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR612873|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR600000|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR613725|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593383|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	CR593477|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg18_v1_chr11_-_17454995_17455030	0.00195367	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg18_v1_chr7_-_155297576_155297727	0.00194811	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg18_v1_chr1_-_172199799_172199884	0.00193074	SOX2.p2	AK093501|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr20_+_25336328_25336372	0.00190448	SOX2.p2	D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)
hg18_v1_chr1_-_13204251_13204278	0.00187339	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22	NM_001013692|PRAMEF3|401940|PRAME family member 3
hg18_v1_chrX_-_148604506_148604506	0.00187064	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr1_-_242681860_242682062	0.00184645	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr6_-_38778882_38778890	0.00181727	SOX2.p2	BC011365|GLO1|2739|glyoxalase I	CR596001|GLO1|2739|glyoxalase I
hg18_v1_chr12_+_6751930_6752049	0.00181652	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg18_v1_chr4_-_103485309_103485390	0.00180582	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr17_+_77261447_77261453	0.00178214	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr1_+_117404467_117404487	0.00176449	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr10_-_13430195_13430351	0.00174049	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr3_+_110611526_110611526	0.00173807	SOX2.p2	AK058092|FLJ25363|401082|hypothetical LOC401082	NM_001145553|FLJ25363|401082|hypothetical LOC401082
hg18_v1_chr17_-_40263704_40263706	0.00173193	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	CR594677|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr14_-_54720101_54720218	0.00172818	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg18_v1_chr1_-_210654862_210654889	0.00168702	SOX2.p2	AK297200|TMEM206|55248|transmembrane protein 206	NM_001198862|TMEM206|55248|transmembrane protein 206	AK024066|TMEM206|55248|transmembrane protein 206	NM_018252|TMEM206|55248|transmembrane protein 206
hg18_v1_chr5_-_134763464_134763480	0.00168142	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr19_+_46462125_46462168	0.00165004	SOX2.p2	CR594584|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr9_-_124280025_124280055	0.00164446	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr9_+_124742932_124743167	0.0016222	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr12_+_132217285_132217286	0.00160643	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg18_v1_chr9_-_34610489_34610497	0.00158608	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr2_+_201644706_201645001	0.00158376	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg18_v1_chr9_+_101717278_101717284	0.00158273	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg18_v1_chr11_+_118394637_118394692	0.00151102	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr8_+_92330691_92330722	0.00149816	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr4_-_84150885_84150986	0.00146808	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr9_-_35062545_35062569	0.00146194	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg18_v1_chr6_-_127706141_127706196	0.00144061	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr16_+_1246273_1246282	0.00143127	SOX2.p2	NM_012217|TPSD1|23430|tryptase delta 1	BC069143|TPSD1|23430|tryptase delta 1
hg18_v1_chr20_+_35407872_35407970	0.00141313	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg18_v1_chr19_-_63301402_63301411	0.00140078	SOX2.p2	AK296417|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr2_+_70168443_70168483	0.00134721	SOX2.p2	CR598326|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr1_+_149405128_149405257	0.00134687	SOX2.p2	AK301644|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	CR607615|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1	CR620396|SCNM1|79005|sodium channel modifier 1
hg18_v1_chr17_+_29707583_29707706	0.00134292	SOX2.p2	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13	U59808|CCL13|6357|chemokine (C-C motif) ligand 13	AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13	BC008621|CCL13|6357|chemokine (C-C motif) ligand 13	U46767|CCL13|6357|chemokine (C-C motif) ligand 13	X98306|CCL13|6357|chemokine (C-C motif) ligand 13	DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13	DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13	BT007385|CCL13|6357|chemokine (C-C motif) ligand 13	CR450337|CCL13|6357|chemokine (C-C motif) ligand 13	Z77650|CCL13|6357|chemokine (C-C motif) ligand 13
hg18_v1_chr5_+_149549712_149549843	0.00131556	SOX2.p2	AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
hg18_v1_chr7_+_50106227_50106227	0.00131424	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr19_-_63301418_63301541	0.00130495	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr6_-_74286876_74286906	0.00130402	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr6_-_30693003_30693062	0.00129358	SOX2.p2	BC150310|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr2_-_219614481_219614492	0.00125659	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg18_v1_chr8_+_23442307_23442323	0.00122797	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr4_+_2440977_2440980	0.00121944	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg18_v1_chr18_-_42956645_42956729	0.00121147	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596950|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596209|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1	CR614259|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr6_-_136652625_136652681	0.00120467	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg18_v1_chr14_+_66896840_66896900	0.00119718	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr1_-_222100296_222100338	0.00118163	SOX2.p2	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2	NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2
hg18_v1_chrX_+_69404879_69404926	0.00117284	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg18_v1_chr19_+_46462169_46462170	0.00113868	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr10_+_104211148_104211197	0.00113825	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg18_v1_chr12_-_6668085_6668085	0.00112714	SOX2.p2	NM_001039916|ZNF384|171017|zinc finger protein 384
hg18_v1_chr5_+_157090900_157091112	0.00111879	SOX2.p2	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	CR626757|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
hg18_v1_chr17_-_37422926_37422972	0.00108976	SOX2.p2	AB209834|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ893064|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ896317|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK291047|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC003601|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	U46571|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AM393511|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC011837|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK296602|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK316081|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg18_v1_chr6_+_88111289_88111289	0.00106345	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg18_v1_chr19_-_43995579_43995579	0.0010564	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg18_v1_chr17_-_27693246_27693394	0.00105201	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	CR618435|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	CR599009|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg18_v1_chr8_+_85258257_85258323	0.00104133	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr12_+_56462794_56462885	0.00100882	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	CR592271|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial	CR622683|TSFM|10102|Ts translation elongation factor, mitochondrial	CR606259|TSFM|10102|Ts translation elongation factor, mitochondrial
hg18_v1_chr11_-_55128424_55128449	0.000996308	SOX2.p2	NM_001004700|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11	BC140727|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11
hg18_v1_chr2_-_85969527_85969667	0.000986151	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chr11_-_18769703_18769980	0.000976362	SOX2.p2	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg18_v1_chr3_-_63984134_63984246	0.000975108	SOX2.p2	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591954|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR593438|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR606536|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR609059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591399|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR614166|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR602355|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591251|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg18_v1_chr1_+_107400789_107400988	0.000971342	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr9_-_35062578_35062592	0.000957986	SOX2.p2	CR606334|VCP|7415|valosin containing protein
hg18_v1_chr17_-_53784494_53784576	0.000951736	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR616121|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605018|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605330|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594796|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR613341|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594476|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR622557|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg18_v1_chr6_-_38778860_38778880	0.000951205	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	CR617753|GLO1|2739|glyoxalase I	CR623176|GLO1|2739|glyoxalase I	CR603414|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I	CR619737|GLO1|2739|glyoxalase I
hg18_v1_chr6_+_153113624_153113734	0.000948119	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	CR593090|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg18_v1_chr7_+_138676436_138676436	0.000940185	SOX2.p2	NM_197964|C7orf55|154791|chromosome 7 open reading frame 55
hg18_v1_chr11_+_118394350_118394450	0.000932737	SOX2.p2	CR616613|TRAPPC4|51399|trafficking protein particle complex 4	CR591716|TRAPPC4|51399|trafficking protein particle complex 4	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr4_+_30331289_30331296	0.000926268	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg18_v1_chr21_-_44926485_44926505	0.000904188	SOX2.p2	AB076363|KRTAP12-1|353332|keratin associated protein 12-1	BC127648|KRTAP12-1|353332|keratin associated protein 12-1	BC119713|KRTAP12-1|353332|keratin associated protein 12-1	BC120942|KRTAP12-1|353332|keratin associated protein 12-1	AJ566388|KRTAP12-1|353332|keratin associated protein 12-1	NM_181686|KRTAP12-1|353332|keratin associated protein 12-1
hg18_v1_chr16_+_79626817_79627211	0.000901325	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr1_-_201097253_201097358	0.000893998	SOX2.p2	
hg18_v1_chr9_-_34610499_34610533	0.000880446	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chrX_+_136476353_136476514	0.000879756	SOX2.p2	EU532020|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113393|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113395|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr19_-_55706156_55706288	0.000863252	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg18_v1_chr2_-_74455161_74455369	0.00083226	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chrX_-_15782859_15782859	0.000784839	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr11_-_107234702_107234729	0.00077554	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr1_+_200124412_200124439	0.000765581	SOX2.p2	AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr9_-_129679760_129679842	0.00076335	SOX2.p2	BC001116|AK1|203|adenylate kinase 1	BC036803|AK1|203|adenylate kinase 1	AK313758|AK1|203|adenylate kinase 1	BC100022|AK1|203|adenylate kinase 1	NM_000476|AK1|203|adenylate kinase 1
hg18_v1_chr1_-_152162074_152162076	0.0007599	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr6_+_170457763_170457773	0.000757252	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr6_+_170457774_170457836	0.000755975	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr16_+_74868676_74868806	0.000728953	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg18_v1_chr19_+_45948911_45949152	0.000676395	SOX2.p2	CR612581|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR604415|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR617901|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614107|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR595370|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR613649|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR591403|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR593045|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597345|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620634|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611939|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR609533|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR622302|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr1_+_110683580_110683580	0.000658117	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr2_+_211166323_211166337	0.00065557	SOX2.p2	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr14_-_73962557_73962557	0.000645709	SOX2.p2	NM_001105579|TMEM90A|646658|transmembrane protein 90A
hg18_v1_chr17_-_37422656_37422708	0.000632673	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg18_v1_chr5_+_140780720_140780786	0.000630446	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr12_-_55758754_55758802	0.000623938	SOX2.p2	AB006624|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr6_+_43089947_43089949	0.000604847	SOX2.p2	CR622022|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr6_-_38778900_38778931	0.000599366	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg18_v1_chr22_+_27498679_27498720	0.000589349	SOX2.p2	BC065549|CCDC117|150275|coiled-coil domain containing 117	BC053874|CCDC117|150275|coiled-coil domain containing 117	BC040488|CCDC117|150275|coiled-coil domain containing 117	AK302925|CCDC117|150275|coiled-coil domain containing 117
hg18_v1_chr12_-_6831305_6831490	0.000588384	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg18_v1_chr2_+_113015962_113016083	0.000586285	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg18_v1_chr3_-_57558193_57558268	0.000583744	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg18_v1_chr13_-_23369124_23369193	0.000567799	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr2_-_190357320_190357367	0.000477577	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr6_+_71333327_71333366	0.000461131	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chrX_-_15782803_15782812	0.000458831	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr9_+_129870416_129870464	0.000442299	SOX2.p2	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr5_+_147628567_147628615	0.000422477	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg18_v1_chr17_-_17125214_17125313	0.000406113	SOX2.p2	CR613300|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR597915|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR590945|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR602972|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR608585|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR595552|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR599192|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR617410|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR618089|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR619826|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR622277|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR594817|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr11_-_51269023_51269023	0.000366792	SOX2.p2	BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5	NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5
hg18_v1_chr1_+_28935719_28936022	0.000348824	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr2_-_152663748_152663838	0.00034261	SOX2.p2	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chrX_+_102078855_102078855	0.000340278	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg18_v1_chr19_-_60827732_60827745	0.000338296	SOX2.p2	CR618267|ZNF784|147808|zinc finger protein 784	AK074859|ZNF784|147808|zinc finger protein 784
hg18_v1_chr6_+_34312641_34312657	0.000314168	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	CR614979|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr16_-_30705707_30706089	0.000302991	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg18_v1_chr2_-_206732348_206732447	0.000274178	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg18_v1_chr17_+_72244224_72244529	0.000271112	SOX2.p2	AF015190|MFSD11|79157|major facilitator superfamily domain containing 11	AF015186|MFSD11|79157|major facilitator superfamily domain containing 11	AF015187|MFSD11|79157|major facilitator superfamily domain containing 11
hg18_v1_chr4_+_170778303_170778562	0.00026185	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg18_v1_chr11_+_12355600_12355770	0.000259061	SOX2.p2	AK098504|PARVA|55742|parvin, alpha	CR624090|PARVA|55742|parvin, alpha	AF237771|PARVA|55742|parvin, alpha	AK022316|PARVA|55742|parvin, alpha	BC016713|PARVA|55742|parvin, alpha	CR612774|PARVA|55742|parvin, alpha	CR590611|PARVA|55742|parvin, alpha	AK001655|PARVA|55742|parvin, alpha	NM_018222|PARVA|55742|parvin, alpha	CR612241|PARVA|55742|parvin, alpha	BC014535|PARVA|55742|parvin, alpha	CR599976|PARVA|55742|parvin, alpha	EU832601|PARVA|55742|parvin, alpha	AF325830|PARVA|55742|parvin, alpha
hg18_v1_chr19_+_54872220_54872303	0.000238349	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr6_-_38778849_38778858	0.000231757	SOX2.p2	BC015934|GLO1|2739|glyoxalase I	CR625986|GLO1|2739|glyoxalase I
hg18_v1_chr6_+_43257883_43257902	0.000229725	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg18_v1_chr15_-_89276657_89276824	0.000190139	SOX2.p2	CR625970|HDDC3|374659|HD domain containing 3	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg18_v1_chrX_-_15782826_15782834	0.000170552	SOX2.p2	
hg18_v1_chr6_-_31890765_31890813	0.000135635	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg18_v1_chr4_-_39655554_39655912	0.000125744	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chrX_-_15782792_15782802	0.000125344	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr2_+_198088559_198088564	0.00011161	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr10_-_81698840_81698840	0.000101004	SOX2.p2	BC022318|SFTPD|6441|surfactant protein D	NM_003019|SFTPD|6441|surfactant protein D
hg18_v1_chr17_+_13913566_13913647	9.80965e-05	SOX2.p2	BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg18_v1_chr16_-_626293_626374	9.78545e-05	SOX2.p2	AK294482|C16orf13|84326|chromosome 16 open reading frame 13	AK295628|C16orf13|84326|chromosome 16 open reading frame 13	BC047118|C16orf13|84326|chromosome 16 open reading frame 13	AK057077|C16orf13|84326|chromosome 16 open reading frame 13	BC007207|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13	NM_032366|C16orf13|84326|chromosome 16 open reading frame 13
hg18_v1_chr2_-_21081694_21081813	7.7186e-05	SOX2.p2	X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr6_+_139136349_139136621	7.09676e-05	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	CR598704|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	CR626300|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A	CR612663|CCDC28A|25901|coiled-coil domain containing 28A	CR626831|CCDC28A|25901|coiled-coil domain containing 28A
hg18_v1_chr3_-_47798341_47798346	6.28016e-05	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr1_-_110950497_110950513	3.43692e-05	SOX2.p2	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2
hg18_v1_chr6_+_43257903_43257928	8.05093e-06	SOX2.p2	BC028159|CUL9|23113|cullin 9
