hg18_v1_chr4_+_110968594_110968607	1.78387	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr6_-_128263868_128263918	1.60303	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg18_v1_chr17_-_1195096_1195116	1.52642	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr4_-_101658094_101658272	1.43912	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg18_v1_chr3_-_150533948_150534237	1.24391	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg18_v1_chr3_-_150422474_150422521	1.21658	SOX2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg18_v1_chr5_+_140460240_140460417	1.17534	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg18_v1_chr1_-_197173159_197173182	1.17306	SOX2.p2	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor
hg18_v1_chr3_+_142587973_142587983	1.08746	SOX2.p2	
hg18_v1_chr10_-_32707549_32707737	1.08121	SOX2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr5_+_140454382_140454598	0.992969	SOX2.p2	AK027526|PCDHB2|56133|protocadherin beta 2	BC098575|PCDHB2|56133|protocadherin beta 2	NM_018936|PCDHB2|56133|protocadherin beta 2	AK314642|PCDHB2|56133|protocadherin beta 2	BC098347|PCDHB2|56133|protocadherin beta 2	AF152495|PCDHB2|56133|protocadherin beta 2	AF217756|PCDHB2|56133|protocadherin beta 2	AB209745|PCDHB2|56133|protocadherin beta 2
hg18_v1_chr14_-_64479198_64479339	0.950801	SOX2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg18_v1_chr7_+_106897737_106897740	0.94864	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr15_+_49760841_49761005	0.929864	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg18_v1_chr6_-_130072971_130073068	0.906989	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg18_v1_chr9_+_112470871_112471004	0.895599	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr12_+_79362256_79362256	0.891604	SOX2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr3_+_182900081_182900092	0.888537	SOX2.p2	BC016393|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)
hg18_v1_chr10_-_62002672_62002721	0.862713	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr2_-_165768798_165768849	0.845779	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg18_v1_chr1_+_169421011_169421081	0.82573	SOX2.p2	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)
hg18_v1_chr12_+_14429499_14429579	0.821612	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr2_-_174475528_174475673	0.781932	SOX2.p2	
hg18_v1_chr11_+_55319607_55319607	0.770413	SOX2.p2	NM_001004735|OR5D14|219436|olfactory receptor, family 5, subfamily D, member 14
hg18_v1_chr10_-_11614279_11614279	0.768918	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr4_+_146623405_146623412	0.765702	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg18_v1_chr12_-_101115677_101115743	0.730369	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg18_v1_chr16_+_55373241_55373268	0.722515	SOX2.p2	AK056637|NUP93|9688|nucleoporin 93kDa
hg18_v1_chr4_-_184480572_184480572	0.721576	SOX2.p2	NM_001185149|CLDN24|100132463|claudin 24
hg18_v1_chr1_-_151296611_151296611	0.712901	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg18_v1_chr13_-_98428244_98428338	0.709193	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr1_+_50344550_50344550	0.705639	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr2_+_108751033_108751198	0.70244	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr5_-_38631263_38631263	0.699623	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr4_-_187114407_187114525	0.699188	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chrX_+_15428820_15428960	0.698335	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr8_-_81155564_81155605	0.695336	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg18_v1_chr2_-_56266408_56266418	0.689678	SOX2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr9_+_115678365_115678476	0.68005	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr4_+_113437947_113438006	0.673533	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr3_+_142175329_142175385	0.668192	SOX2.p2	CR602139|SLC25A36|55186|solute carrier family 25, member 36
hg18_v1_chr7_-_84589182_84589182	0.664808	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg18_v1_chr16_-_71639670_71639774	0.660271	SOX2.p2	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chr3_+_51837608_51837608	0.660167	SOX2.p2	NM_001085479|IQCF3|401067|IQ motif containing F3
hg18_v1_chr10_-_103864651_103864785	0.657278	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg18_v1_chr14_-_30927931_30927931	0.655292	SOX2.p2	BC045764|HEATR5A|25938|HEAT repeat containing 5A	NM_015473|HEATR5A|25938|HEAT repeat containing 5A
hg18_v1_chr15_+_47502666_47502771	0.651234	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr7_-_92693716_92693722	0.630863	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg18_v1_chr2_+_110013297_110013297	0.62002	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr10_-_103864579_103864639	0.614918	SOX2.p2	AK300588|LDB1|8861|LIM domain binding 1
hg18_v1_chr3_+_23904086_23904139	0.600326	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr12_-_11399776_11399791	0.59621	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg18_v1_chr9_+_89302239_89302573	0.593283	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr5_-_88235624_88235677	0.592329	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_-_61566477_61566607	0.591642	SOX2.p2	CR609163|XPO1|7514|exportin 1 (CRM1 homolog, yeast)
hg18_v1_chr3_-_192531018_192531018	0.588265	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr11_+_100367929_100368020	0.586115	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg18_v1_chr5_+_140181405_140181544	0.585935	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg18_v1_chr9_-_94338072_94338194	0.584458	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg18_v1_chr2_+_173794692_173794736	0.58298	SOX2.p2	CR606268|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK
hg18_v1_chr2_+_169631777_169631965	0.576671	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr7_-_11838260_11838369	0.574368	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr6_+_88111289_88111289	0.573683	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg18_v1_chr3_+_176059763_176059805	0.567753	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr11_+_22316242_22316242	0.566637	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr5_+_147628567_147628615	0.565499	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg18_v1_chr12_-_10042956_10043165	0.563791	SOX2.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg18_v1_chr5_+_140235114_140235241	0.561568	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12
hg18_v1_chr9_-_72673753_72673808	0.554132	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg18_v1_chr3_+_190831909_190831998	0.548856	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr3_-_197726587_197726633	0.543199	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr1_-_152431175_152431232	0.542747	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr11_+_5862076_5862098	0.536111	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg18_v1_chr3_-_121065112_121065117	0.52818	SOX2.p2	
hg18_v1_chr2_-_110665188_110665188	0.527793	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr2_+_114935623_114935649	0.526232	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr2_-_37752272_37752294	0.525978	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr3_-_3127057_3127057	0.522048	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg18_v1_chr14_-_46882144_46882187	0.510117	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr1_-_102234959_102235192	0.509712	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg18_v1_chr5_-_100266769_100266886	0.507273	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr8_-_145809695_145809695	0.502008	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg18_v1_chr2_+_108637698_108637699	0.500136	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr4_+_119174947_119175100	0.499883	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr3_+_188131209_188131334	0.494815	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chrX_+_12904207_12904321	0.493198	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr2_+_108637916_108637940	0.492233	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chrX_-_11194015_11194044	0.48957	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr2_+_167468220_167468220	0.487584	SOX2.p2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2
hg18_v1_chr14_+_19318240_19318321	0.483183	SOX2.p2	BC136987|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1	NM_001005500|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1
hg18_v1_chr7_+_20337249_20337270	0.481575	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr3_+_186563529_186563723	0.480706	SOX2.p2	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chrX_-_33267646_33267646	0.479644	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg18_v1_chr6_-_50097606_50097652	0.477131	SOX2.p2	DQ012014|DEFB110|245913|defensin, beta 110 locus	DQ012015|DEFB110|245913|defensin, beta 110 locus	NM_001037497|DEFB110|245913|defensin, beta 110 locus	NM_001037728|DEFB110|245913|defensin, beta 110 locus
hg18_v1_chr11_-_92570626_92570645	0.477102	SOX2.p2	
hg18_v1_chr12_-_7935010_7935061	0.475447	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg18_v1_chr9_-_36365965_36366036	0.47475	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg18_v1_chr21_-_31853160_31853298	0.472891	SOX2.p2	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg18_v1_chr2_-_178461710_178461711	0.471122	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr11_+_125258718_125258718	0.470889	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg18_v1_chr9_+_89302574_89302803	0.470429	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chrX_+_11687655_11687681	0.467349	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr4_+_123380569_123380579	0.466425	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr4_-_152368492_152368631	0.466267	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr14_+_59934178_59934231	0.465397	SOX2.p2	
hg18_v1_chr2_+_114390975_114390991	0.465029	SOX2.p2	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr4_+_144654005_144654352	0.461887	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chr8_-_18710575_18710684	0.461445	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr3_+_44665220_44665280	0.456408	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg18_v1_chr1_-_74971679_74971679	0.455076	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr1_+_154855709_154855912	0.45422	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg18_v1_chr21_-_36870736_36870736	0.453294	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg18_v1_chr6_-_52818851_52818851	0.453188	SOX2.p2	NM_153699|GSTA5|221357|glutathione S-transferase alpha 5
hg18_v1_chr2_-_198248828_198249012	0.45176	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chr1_+_176577228_176577286	0.45123	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg18_v1_chr12_-_10464308_10464460	0.450006	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg18_v1_chr4_-_184478920_184478920	0.44677	SOX2.p2	NM_001111319|CLDN22|53842|claudin 22
hg18_v1_chr3_+_134601479_134601617	0.439916	SOX2.p2	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin	U48224|BFSP2|8419|beaded filament structural protein 2, phakinin
hg18_v1_chr15_-_80125403_80125440	0.439861	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr4_+_39376058_39376341	0.43939	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	CR606205|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
hg18_v1_chr8_+_107529327_107529327	0.439216	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr18_-_49944986_49944994	0.435533	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr11_-_117600918_117601018	0.435405	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr7_-_158304062_158304201	0.434805	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chr12_+_10973100_10973179	0.434666	SOX2.p2	BX641094|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_005042|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC095488|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538206|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538207|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647155|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648436|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648871|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_001110213|PRH2|5555|proline-rich protein HaeIII subfamily 2	CR749583|PRH2|5555|proline-rich protein HaeIII subfamily 2	K03202|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647156|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC141916|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC136499|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648656|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648901|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647085|PRH2|5555|proline-rich protein HaeIII subfamily 2
hg18_v1_chr4_-_83569476_83569571	0.434297	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chrX_-_50573759_50573943	0.433023	SOX2.p2	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg18_v1_chr8_+_54926920_54927012	0.4312	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg18_v1_chr12_-_11439752_11439764	0.430515	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg18_v1_chr3_-_150993299_150993299	0.429487	SOX2.p2	BC171805|C3orf16|389161|chromosome 3 open reading frame 16	NM_001144960|C3orf16|389161|chromosome 3 open reading frame 16
hg18_v1_chr4_+_166350620_166350637	0.428942	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg18_v1_chr5_+_140573692_140573721	0.426336	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg18_v1_chr10_-_11693535_11693750	0.425016	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr4_+_71418886_71418906	0.42135	SOX2.p2	AY358528|AMTN|401138|amelotin	NM_212557|AMTN|401138|amelotin	BC121812|AMTN|401138|amelotin	BC121817|AMTN|401138|amelotin
hg18_v1_chr1_+_242281199_242281214	0.420568	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr5_+_15553288_15553310	0.419522	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr2_-_38683119_38683272	0.418896	SOX2.p2	CR600541|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr12_-_9804682_9804763	0.416608	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr10_-_74863303_74863375	0.416562	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr12_+_54172413_54172413	0.416423	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr3_-_194579207_194579325	0.415279	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr2_-_21087435_21087487	0.415233	SOX2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr1_-_51660328_51660380	0.40809	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr5_+_140546839_140547077	0.402591	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg18_v1_chr8_-_28403652_28403745	0.402473	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16	CR590799|FBXO16|157574|F-box protein 16
hg18_v1_chr8_-_103735194_103735343	0.399369	SOX2.p2	BC011538|KLF10|7071|Kruppel-like factor 10	NM_001032282|KLF10|7071|Kruppel-like factor 10	S81439|KLF10|7071|Kruppel-like factor 10
hg18_v1_chr2_+_138438277_138438531	0.399199	SOX2.p2	NM_001024074|HNMT|3176|histamine N-methyltransferase	NM_001024075|HNMT|3176|histamine N-methyltransferase	NM_006895|HNMT|3176|histamine N-methyltransferase	AF523356|HNMT|3176|histamine N-methyltransferase	AF523357|HNMT|3176|histamine N-methyltransferase	AF523358|HNMT|3176|histamine N-methyltransferase	AF523359|HNMT|3176|histamine N-methyltransferase	AF523360|HNMT|3176|histamine N-methyltransferase	U08092|HNMT|3176|histamine N-methyltransferase	BC005907|HNMT|3176|histamine N-methyltransferase	AK301462|HNMT|3176|histamine N-methyltransferase	AK313804|HNMT|3176|histamine N-methyltransferase	BC020677|HNMT|3176|histamine N-methyltransferase	D16224|HNMT|3176|histamine N-methyltransferase	DQ891166|HNMT|3176|histamine N-methyltransferase	DQ894348|HNMT|3176|histamine N-methyltransferase
hg18_v1_chr3_-_187744808_187744860	0.398096	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr6_+_114285209_114285646	0.397629	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr5_+_56545657_56545714	0.397267	SOX2.p2	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1	AL136844|GPBP1|65056|GC-rich promoter binding protein 1	AM392551|GPBP1|65056|GC-rich promoter binding protein 1	AM393442|GPBP1|65056|GC-rich promoter binding protein 1
hg18_v1_chr7_-_27186400_27186400	0.397197	SOX2.p2	NM_153715|HOXA10|3206|homeobox A10
hg18_v1_chr13_+_107753764_107753872	0.39494	SOX2.p2	
hg18_v1_chr3_-_127303080_127303089	0.394276	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr11_+_6854431_6854454	0.390054	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chr7_+_102340579_102340757	0.38961	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr17_-_10265991_10265991	0.386498	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr1_-_171441234_171441319	0.385952	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr5_+_147754467_147754532	0.382895	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg18_v1_chr17_-_30783631_30783655	0.382598	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr9_-_19368815_19368917	0.381996	SOX2.p2	BC035447|RPS6|6194|ribosomal protein S6
hg18_v1_chr3_-_14964861_14964934	0.381599	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr5_+_140215778_140215817	0.381251	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg18_v1_chr1_-_68470585_68470905	0.380827	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	CR624611|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg18_v1_chr9_-_4142182_4142182	0.378882	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr1_-_223907283_223907538	0.378634	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr1_-_151280201_151280218	0.378525	SOX2.p2	BC093801|SPRR2D|6703|small proline-rich protein 2D	BC093803|SPRR2D|6703|small proline-rich protein 2D	BC120938|SPRR2D|6703|small proline-rich protein 2D	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg18_v1_chr11_-_55460451_55460451	0.378407	SOX2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr15_-_48198697_48198819	0.375882	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg18_v1_chr11_-_85108030_85108030	0.375801	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr14_-_93493519_93493519	0.374211	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg18_v1_chr12_+_43972732_43972732	0.373359	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr14_+_65205750_65205885	0.372065	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr4_-_139382672_139382956	0.368069	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr14_-_106289751_106290256	0.364787	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr21_+_40161216_40161278	0.364608	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg18_v1_chr12_-_60872814_60872817	0.362665	SOX2.p2	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg18_v1_chr1_-_166965034_166965071	0.361419	SOX2.p2	CR591165|DPT|1805|dermatopontin	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	CR614953|DPT|1805|dermatopontin	CR622672|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	CR596260|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg18_v1_chr2_-_213723298_213723302	0.360816	SOX2.p2	AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr3_+_73193499_73193499	0.360216	SOX2.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chrX_+_84385693_84385791	0.359479	SOX2.p2	BC006349|ZNF711|7552|zinc finger protein 711	AK308097|ZNF711|7552|zinc finger protein 711
hg18_v1_chr15_+_82945223_82945347	0.35931	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr8_+_67201684_67202105	0.359148	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr6_+_144654565_144654657	0.357597	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg18_v1_chr7_-_41709191_41709230	0.356809	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg18_v1_chr6_-_52736231_52736319	0.355272	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg18_v1_chr5_-_137502975_137503030	0.353701	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr2_+_105799354_105799461	0.353029	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg18_v1_chr5_+_140160966_140160966	0.352994	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr16_-_11282595_11282707	0.35223	SOX2.p2	BT006746|PRM1|5619|protamine 1	DQ892487|PRM1|5619|protamine 1	DQ895698|PRM1|5619|protamine 1	CR595410|PRM1|5619|protamine 1	CR607534|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	CR612045|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1	CR601490|PRM1|5619|protamine 1	CR625800|PRM1|5619|protamine 1
hg18_v1_chr4_-_170314382_170314407	0.351485	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr5_-_137876416_137876489	0.34845	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr12_-_6642513_6642621	0.346193	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	CR614525|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	CR596785|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	CR616048|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg18_v1_chr8_+_63324053_63324184	0.345561	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr3_+_99699137_99699214	0.345323	SOX2.p2	BC136724|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	BC136725|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	NM_001004737|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2
hg18_v1_chr7_+_50314801_50314998	0.343313	SOX2.p2	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg18_v1_chr1_+_39647762_39647762	0.342545	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chrX_+_145698993_145698993	0.341025	SOX2.p2	NM_001144064|CXorf51|100129239|chromosome X open reading frame 51
hg18_v1_chr18_-_29412148_29412306	0.340568	SOX2.p2	
hg18_v1_chr13_-_32678142_32678186	0.339617	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr20_+_20296744_20296764	0.339005	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg18_v1_chr4_+_76868763_76868814	0.338024	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr4_+_17225344_17225384	0.337227	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	CR605440|MED28|80306|mediator complex subunit 28	CR618837|MED28|80306|mediator complex subunit 28	CR619532|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	CR607989|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg18_v1_chr4_+_71298187_71298281	0.337026	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg18_v1_chr2_+_181554048_181554097	0.335572	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr11_+_36274300_36274413	0.335255	SOX2.p2	NM_001160167|PRR5L|79899|proline rich 5 like	AK055042|PRR5L|79899|proline rich 5 like
hg18_v1_chr1_-_211087570_211087613	0.333637	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg18_v1_chrX_+_70438352_70438379	0.332956	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg18_v1_chr12_-_65359148_65359191	0.33272	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr18_+_27425727_27425863	0.331562	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg18_v1_chr13_+_110653407_110653440	0.330646	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr7_-_99899829_99899829	0.330445	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg18_v1_chr2_-_128138435_128138636	0.329389	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg18_v1_chr11_+_54891935_54891935	0.32882	SOX2.p2	NM_001005275|OR4A15|81328|olfactory receptor, family 4, subfamily A, member 15
hg18_v1_chr15_+_78483624_78483954	0.327946	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chr4_+_78172966_78173092	0.326512	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr7_+_156128431_156128481	0.325778	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg18_v1_chr2_+_69910424_69910527	0.325168	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chr3_-_69212192_69212234	0.32459	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr1_-_150564302_150564302	0.323991	SOX2.p2	L01090|FLG|2312|filaggrin	NM_002016|FLG|2312|filaggrin
hg18_v1_chr5_+_140594121_140594147	0.323764	SOX2.p2	AK095496|PCDHB18|54660|protocadherin beta 18 pseudogene
hg18_v1_chr17_+_24394281_24394369	0.323594	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr4_-_64957595_64957788	0.322504	SOX2.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg18_v1_chr20_+_36643251_36643257	0.322034	SOX2.p2	BC029594|ADIG|149685|adipogenin	NM_001018082|ADIG|149685|adipogenin	BC119704|ADIG|149685|adipogenin	BC119705|ADIG|149685|adipogenin
hg18_v1_chr4_-_83569572_83569642	0.321212	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr8_+_79740813_79740938	0.320077	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr6_-_130578110_130578186	0.319921	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr10_-_127361583_127361702	0.319556	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	CR611441|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg18_v1_chr14_-_22974707_22974710	0.319257	SOX2.p2	AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta
hg18_v1_chr2_+_191009265_191009365	0.318468	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr2_+_166034402_166034458	0.317935	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr17_+_19930926_19930927	0.317641	SOX2.p2	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg18_v1_chr8_-_108579270_108579458	0.316119	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr12_-_120270035_120270066	0.315257	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg18_v1_chr2_+_166137091_166137100	0.315177	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr15_+_70553719_70553724	0.314653	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr4_+_37655385_37655439	0.313947	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg18_v1_chr6_+_100161370_100161370	0.313293	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg18_v1_chr6_-_11340886_11340886	0.31059	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr15_+_50098730_50098776	0.310189	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr2_-_215953818_215953973	0.31004	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg18_v1_chr18_+_3441589_3441674	0.30939	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr12_-_16649211_16649347	0.309158	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chrX_+_86659370_86659552	0.308006	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr7_-_33047042_33047046	0.307245	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr13_-_109757442_109757578	0.307176	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr4_-_24195113_24195235	0.307161	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr5_-_160211623_160211796	0.306973	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr5_+_140568451_140568475	0.305377	SOX2.p2	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg18_v1_chr15_-_80125514_80125549	0.304606	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr17_-_60439764_60439772	0.303601	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr7_-_36992221_36992270	0.303304	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	NM_130442|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr12_+_100512877_100512977	0.303181	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg18_v1_chr7_+_105390892_105390977	0.302108	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg18_v1_chr4_+_38740246_38740246	0.301921	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr20_+_19818209_19818245	0.301595	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr4_+_123311207_123311207	0.301438	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr7_-_111633428_111633575	0.301308	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr14_-_60260211_60260604	0.300624	SOX2.p2	AF032107|SIX4|51804|SIX homeobox 4	BC098135|SIX4|51804|SIX homeobox 4	BC098282|SIX4|51804|SIX homeobox 4	BC099722|SIX4|51804|SIX homeobox 4	BC101934|SIX4|51804|SIX homeobox 4	EU446619|SIX4|51804|SIX homeobox 4	EU446844|SIX4|51804|SIX homeobox 4	NM_017420|SIX4|51804|SIX homeobox 4
hg18_v1_chr12_-_43593977_43593977	0.300257	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr5_+_132433979_132434025	0.299486	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr5_+_161045235_161045235	0.299099	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg18_v1_chr4_-_111777651_111777678	0.298582	SOX2.p2	CR605855|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr1_-_150353179_150353179	0.296381	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg18_v1_chr2_-_180319013_180319013	0.295954	SOX2.p2	AK096822|ZNF385B|151126|zinc finger protein 385B	NM_001113397|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr5_+_140541163_140541163	0.295369	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg18_v1_chr19_+_1200882_1200886	0.295343	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chrX_+_70359780_70359871	0.295183	SOX2.p2	NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa	BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa	AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa	BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa
hg18_v1_chr14_-_57030227_57030328	0.294695	SOX2.p2	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg18_v1_chr7_-_26198673_26198679	0.293433	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr4_-_68793928_68794006	0.292881	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg18_v1_chr6_+_53043729_53043729	0.292564	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr11_+_55842358_55842358	0.292473	SOX2.p2	NM_001005202|OR8K3|219473|olfactory receptor, family 8, subfamily K, member 3
hg18_v1_chr4_-_111777956_111777956	0.292412	SOX2.p2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2	U69961|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr9_-_21472311_21472311	0.290812	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr7_-_47588652_47588771	0.290663	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg18_v1_chr9_+_22103542_22103676	0.290204	SOX2.p2	BC038540|CDKN2B-AS1|100048912|CDKN2B antisense RNA 1 (non-protein coding)
hg18_v1_chr7_+_26208532_26208632	0.290134	SOX2.p2	
hg18_v1_chr12_+_121218218_121218218	0.290132	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg18_v1_chr20_+_17622319_17622319	0.289439	SOX2.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr2_-_37752731_37753056	0.289361	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr6_+_29902734_29902734	0.288365	SOX2.p2	AK302054|HLA-G|3135|major histocompatibility complex, class I, G	NM_002127|HLA-G|3135|major histocompatibility complex, class I, G
hg18_v1_chr6_-_11340869_11340885	0.287861	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr12_+_102859354_102859421	0.287321	SOX2.p2	CR606918|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1
hg18_v1_chr1_-_166149867_166150076	0.287094	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg18_v1_chr9_+_90193807_90193830	0.287044	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr3_+_179736917_179736917	0.286904	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr17_+_24394043_24394043	0.286532	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr12_-_11354620_11354635	0.286388	SOX2.p2	BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4	BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4	K03207|PRB4|5545|proline-rich protein BstNI subfamily 4	NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4	BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4
hg18_v1_chr2_-_217433018_217433026	0.286009	SOX2.p2	CR601312|TNP1|7141|transition protein 1 (during histone to protamine replacement)	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)	NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)
hg18_v1_chr20_+_29309127_29309127	0.285996	SOX2.p2	DQ012019|DEFB115|245929|defensin, beta 115	NM_001037730|DEFB115|245929|defensin, beta 115
hg18_v1_chr11_-_16380967_16380988	0.285048	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr17_+_18971506_18971506	0.28399	SOX2.p2	BC157869|GRAPL|400581|GRB2-related adaptor protein-like	NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like
hg18_v1_chr6_-_52776558_52776723	0.282115	SOX2.p2	BC053578|GSTA1|2938|glutathione S-transferase alpha 1	BC110891|GSTA1|2938|glutathione S-transferase alpha 1	CR605001|GSTA1|2938|glutathione S-transferase alpha 1	M15872|GSTA1|2938|glutathione S-transferase alpha 1	CR601373|GSTA1|2938|glutathione S-transferase alpha 1	AK293371|GSTA1|2938|glutathione S-transferase alpha 1	M14777|GSTA1|2938|glutathione S-transferase alpha 1	M21758|GSTA1|2938|glutathione S-transferase alpha 1	M25627|GSTA1|2938|glutathione S-transferase alpha 1	NM_145740|GSTA1|2938|glutathione S-transferase alpha 1	AK310324|GSTA1|2938|glutathione S-transferase alpha 1
hg18_v1_chr2_+_69910277_69910345	0.281975	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chr15_+_70553743_70553798	0.281501	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr16_-_20323533_20323559	0.281389	SOX2.p2	BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed	BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed	NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed	AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed
hg18_v1_chr22_-_45311730_45311826	0.281369	SOX2.p2	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
hg18_v1_chr12_+_48443588_48443627	0.281247	SOX2.p2	CR602155|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	CR611691|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr13_-_32658215_32658215	0.28096	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr14_-_37134050_37134085	0.279475	SOX2.p2	AK313785|FOXA1|3169|forkhead box A1
hg18_v1_chr15_+_91244563_91244606	0.279076	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr7_-_93027057_93027057	0.278787	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg18_v1_chr11_+_9552809_9552809	0.278762	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg18_v1_chr12_-_10953427_10953427	0.277841	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr15_+_91244422_91244559	0.276899	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr11_-_60880799_60880936	0.276373	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr2_+_170298700_170298767	0.276258	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr9_+_27514311_27514334	0.275974	SOX2.p2	AF146759|IFNK|56832|interferon, kappa	AF315688|IFNK|56832|interferon, kappa	NM_020124|IFNK|56832|interferon, kappa	AY358855|IFNK|56832|interferon, kappa
hg18_v1_chr12_-_68379331_68379462	0.275713	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr12_-_10479810_10479882	0.275505	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg18_v1_chr17_+_52689372_52689372	0.274428	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr1_-_219977424_219977424	0.273551	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg18_v1_chr4_+_113372287_113372780	0.273485	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg18_v1_chr1_+_36160375_36160517	0.273384	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr2_+_217206327_217206441	0.272544	SOX2.p2	CR618404|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR625740|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR614828|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR595316|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR592781|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR602232|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR606610|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR607166|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR610845|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR611812|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR623237|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR624731|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR590929|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	CR603359|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg18_v1_chr2_-_162717159_162717159	0.272391	SOX2.p2	NM_002054|GCG|2641|glucagon
hg18_v1_chr16_+_24475129_24475130	0.271963	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr19_+_12810258_12810385	0.271804	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	CR609181|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg18_v1_chr5_+_140719773_140719886	0.271569	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg18_v1_chr19_+_44785003_44785047	0.271316	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg18_v1_chr5_+_72504778_72504796	0.271017	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg18_v1_chr7_-_83662152_83662365	0.269694	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg18_v1_chr19_-_2901583_2901642	0.269375	SOX2.p2	
hg18_v1_chr17_-_18890963_18891070	0.268998	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	CR615744|GRAP|10750|GRB2-related adaptor protein	CR624975|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	CR600595|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein	CR595033|GRAP|10750|GRB2-related adaptor protein
hg18_v1_chr8_+_63323739_63323781	0.26884	SOX2.p2	AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr9_+_4829763_4829773	0.268833	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg18_v1_chr6_-_11340887_11340906	0.26826	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr5_+_180348450_180348564	0.268024	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg18_v1_chr3_-_48729593_48729714	0.267819	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	CR591987|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	CR607564|IP6K2|51447|inositol hexakisphosphate kinase 2	CR624222|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	CR618536|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	CR595634|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg18_v1_chr1_+_15957832_15957896	0.26781	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1	CR604326|FBLIM1|54751|filamin binding LIM protein 1
hg18_v1_chr2_+_11600238_11600266	0.264757	SOX2.p2	BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr15_+_22832198_22832286	0.263646	SOX2.p2	AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr17_-_53420595_53420639	0.26293	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr9_+_115303527_115303677	0.262755	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr15_-_47125788_47126069	0.262522	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr6_-_151754337_151754470	0.262373	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg18_v1_chr1_+_40612891_40612935	0.2615	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg18_v1_chr6_-_159386007_159386171	0.261393	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr13_-_44673174_44673174	0.260458	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg18_v1_chr16_+_64958025_64958043	0.260141	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr14_-_89155078_89155619	0.260113	SOX2.p2	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg18_v1_chr3_+_3816079_3816120	0.260071	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg18_v1_chr3_-_152478843_152478919	0.259836	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg18_v1_chr20_-_43577677_43577677	0.25964	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg18_v1_chr19_+_44886785_44886981	0.259068	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr3_+_44601457_44601463	0.258606	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg18_v1_chr17_-_70901303_70901442	0.258425	SOX2.p2	AF498925|GRB2|2885|growth factor receptor-bound protein 2	CR450363|GRB2|2885|growth factor receptor-bound protein 2	CR541942|GRB2|2885|growth factor receptor-bound protein 2	DQ891830|GRB2|2885|growth factor receptor-bound protein 2	DQ894923|GRB2|2885|growth factor receptor-bound protein 2	L29511|GRB2|2885|growth factor receptor-bound protein 2
hg18_v1_chr7_-_36730525_36730678	0.258094	SOX2.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg18_v1_chr1_-_26105954_26105954	0.257915	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr8_-_38324809_38324889	0.25717	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg18_v1_chr12_+_111980044_111980102	0.257151	SOX2.p2	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr9_-_14858974_14859024	0.257073	SOX2.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr16_+_68284252_68284329	0.256918	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr6_+_123359278_123359280	0.25638	SOX2.p2	BC101377|CLVS2|134829|clavesin 2	BC101376|CLVS2|134829|clavesin 2	NM_001010852|CLVS2|134829|clavesin 2
hg18_v1_chr10_-_63698463_63698627	0.25637	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr15_-_75259714_75259853	0.255933	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr4_+_77214886_77214900	0.255686	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg18_v1_chr11_-_27637771_27637771	0.25512	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr12_-_11066436_11066485	0.254539	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg18_v1_chr7_+_93388951_93389086	0.254047	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR622777|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR596301|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR592688|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR603702|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR590486|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg18_v1_chrX_-_41667174_41667365	0.253858	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr12_+_54646814_54646899	0.253028	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	CR603533|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg18_v1_chr12_-_10893318_10893341	0.252374	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg18_v1_chr6_+_97117144_97117237	0.252218	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr7_+_37746520_37746520	0.251302	SOX2.p2	AY288420|GPR141|353345|G protein-coupled receptor 141	BC120951|GPR141|353345|G protein-coupled receptor 141	BC120952|GPR141|353345|G protein-coupled receptor 141	NM_181791|GPR141|353345|G protein-coupled receptor 141
hg18_v1_chr17_+_75366524_75366628	0.250929	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg18_v1_chr6_-_132980901_132980924	0.249943	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr10_-_98315090_98315173	0.249646	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr6_-_49789204_49789257	0.247877	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg18_v1_chr6_-_89984214_89984214	0.247559	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg18_v1_chr1_+_116727514_116727514	0.247124	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr4_-_76868581_76868818	0.246919	SOX2.p2	
hg18_v1_chr11_-_6870306_6870405	0.246399	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr17_+_30594192_30594220	0.246071	SOX2.p2	NM_144975|SLFN5|162394|schlafen family member 5	AK303632|SLFN5|162394|schlafen family member 5	BX647942|SLFN5|162394|schlafen family member 5	AK054668|SLFN5|162394|schlafen family member 5	AK303299|SLFN5|162394|schlafen family member 5	BC021238|SLFN5|162394|schlafen family member 5
hg18_v1_chr9_+_124321239_124321241	0.245986	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg18_v1_chr11_-_71501385_71501473	0.245863	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	CR603805|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg18_v1_chr15_+_100163424_100163445	0.245537	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr2_+_104838177_104838483	0.245509	SOX2.p2	NM_006236|POU3F3|5455|POU class 3 homeobox 3
hg18_v1_chrX_+_12903145_12903177	0.244772	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_183049|TMSL3|7117|thymosin-like 3	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	CR621963|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr1_+_227506751_227506751	0.244547	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr14_+_62740878_62741014	0.244348	SOX2.p2	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	NM_020663|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg18_v1_chr14_-_34252695_34252784	0.24374	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr6_-_150099352_150099400	0.243611	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg18_v1_chr13_-_45087859_45087874	0.243405	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg18_v1_chr14_+_31868229_31868346	0.243261	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg18_v1_chr16_-_87535106_87535108	0.243138	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr10_+_70517863_70517960	0.242999	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr7_+_54577512_54577641	0.242981	SOX2.p2	NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A	CR617415|VSTM2A|222008|V-set and transmembrane domain containing 2A	CR613464|VSTM2A|222008|V-set and transmembrane domain containing 2A	BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A
hg18_v1_chr4_+_76868850_76869027	0.242699	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr17_-_1029758_1029880	0.242405	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg18_v1_chr1_-_165754325_165754470	0.242088	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	CR625818|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	CR601423|CD247|919|CD247 molecule	CR615998|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg18_v1_chr2_-_180135559_180135559	0.241756	SOX2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr12_+_50342814_50342868	0.240472	SOX2.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg18_v1_chr5_+_140605330_140605330	0.240314	SOX2.p2	AF152494|PCDHB15|56121|protocadherin beta 15	AF217742|PCDHB15|56121|protocadherin beta 15	DQ893315|PCDHB15|56121|protocadherin beta 15	DQ896630|PCDHB15|56121|protocadherin beta 15	NM_018935|PCDHB15|56121|protocadherin beta 15
hg18_v1_chr5_+_76470829_76470856	0.240275	SOX2.p2	
hg18_v1_chr15_-_68781662_68781700	0.240039	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr1_+_32251988_32252183	0.240031	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr6_-_123999640_123999844	0.239532	SOX2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr4_-_54119102_54119112	0.23936	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr9_+_4480193_4480681	0.239175	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg18_v1_chr9_+_676640_676693	0.238378	SOX2.p2	
hg18_v1_chr2_-_138762909_138762922	0.238365	SOX2.p2	
hg18_v1_chr5_+_140154627_140154733	0.238241	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg18_v1_chr7_+_113853790_113853942	0.238154	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr1_+_145841569_145841569	0.237991	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chrX_-_31436335_31436335	0.237264	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr5_+_57914658_57914695	0.23683	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg18_v1_chr19_+_56990222_56990227	0.236018	SOX2.p2	AK123030|FPR3|2359|formyl peptide receptor 3	AK292541|FPR3|2359|formyl peptide receptor 3	NM_002030|FPR3|2359|formyl peptide receptor 3	BC059388|FPR3|2359|formyl peptide receptor 3
hg18_v1_chr19_-_1603325_1603352	0.235213	SOX2.p2	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg18_v1_chr13_+_96592051_96592116	0.234939	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chr9_+_27099138_27099146	0.234747	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr5_-_36337756_36337767	0.234196	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chrX_-_76928334_76928430	0.233884	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr6_+_116939500_116939528	0.233459	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr9_+_15412862_15412874	0.23299	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr20_+_60558104_60558104	0.232953	SOX2.p2	AK056985|C20orf166|128826|chromosome 20 open reading frame 166	NM_178463|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr20_-_45418818_45418973	0.232511	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr4_+_124537334_124537479	0.232009	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr5_+_140583098_140583262	0.231941	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg18_v1_chr3_+_46591048_46591048	0.231612	SOX2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg18_v1_chr11_+_100063061_100063616	0.231067	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr14_+_76297885_76298532	0.231042	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr5_-_64813459_64813502	0.230598	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg18_v1_chrX_+_70419766_70419766	0.230466	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr5_-_131907071_131907112	0.230371	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg18_v1_chr7_+_134114912_134114947	0.229784	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg18_v1_chr3_+_112743729_112743785	0.229744	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg18_v1_chr3_+_1109619_1109707	0.229489	SOX2.p2	AK314220|CNTN6|27255|contactin 6	BC036338|CNTN6|27255|contactin 6	AB003592|CNTN6|27255|contactin 6	NM_014461|CNTN6|27255|contactin 6	BC113118|CNTN6|27255|contactin 6	AK307814|CNTN6|27255|contactin 6
hg18_v1_chr14_-_68689623_68689713	0.229018	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr17_+_34114924_34115326	0.228659	SOX2.p2	BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr11_+_129689536_129689628	0.22807	SOX2.p2	AK091840|FLJ34521|646383|hypothetical protein LOC646383
hg18_v1_chr13_-_74953873_74954806	0.227866	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr4_+_76868830_76868849	0.227631	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr10_-_73784661_73784707	0.227084	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	CR606618|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg18_v1_chr5_+_140747586_140747635	0.227043	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg18_v1_chr10_+_49184658_49184926	0.226106	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr12_-_106678910_106679029	0.225818	SOX2.p2	AK056378|PRDM4|11108|PR domain containing 4
hg18_v1_chr15_-_81667773_81667828	0.224493	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr1_+_242281175_242281183	0.223633	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr16_+_23673448_23673592	0.223234	SOX2.p2	AF146019|CHP2|63928|calcineurin B homologous protein 2	NM_022097|CHP2|63928|calcineurin B homologous protein 2	AK313062|CHP2|63928|calcineurin B homologous protein 2
hg18_v1_chr10_-_98326435_98326563	0.221831	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr7_+_127883117_127883287	0.221659	SOX2.p2	NM_001098786|C7orf68|29923|chromosome 7 open reading frame 68	NM_013332|C7orf68|29923|chromosome 7 open reading frame 68	AF144755|C7orf68|29923|chromosome 7 open reading frame 68	CR624903|C7orf68|29923|chromosome 7 open reading frame 68	CR624882|C7orf68|29923|chromosome 7 open reading frame 68	AK024729|C7orf68|29923|chromosome 7 open reading frame 68	AK222583|C7orf68|29923|chromosome 7 open reading frame 68	BC008573|C7orf68|29923|chromosome 7 open reading frame 68	BC001863|C7orf68|29923|chromosome 7 open reading frame 68	CR623904|C7orf68|29923|chromosome 7 open reading frame 68	BC093742|C7orf68|29923|chromosome 7 open reading frame 68	BC112183|C7orf68|29923|chromosome 7 open reading frame 68
hg18_v1_chr1_+_242283129_242283204	0.221472	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr5_+_140777454_140777610	0.221425	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg18_v1_chr20_+_2892918_2892935	0.221033	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr11_-_129689669_129689816	0.220571	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr14_-_19843969_19843994	0.220389	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr2_-_160180197_160180323	0.220365	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr9_-_36390817_36390977	0.220186	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg18_v1_chr3_-_193928038_193928081	0.220152	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr3_-_57288019_57288019	0.219894	SOX2.p2	AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14	BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr4_+_146622154_146622511	0.219123	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg18_v1_chr9_-_14388981_14388981	0.218783	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr12_-_106679038_106679043	0.218618	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg18_v1_chr10_+_133850325_133850534	0.218294	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg18_v1_chr1_-_53566331_53566408	0.218198	SOX2.p2	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr10_-_5436781_5436796	0.217528	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg18_v1_chr6_-_50045296_50045296	0.217266	SOX2.p2	DQ012017|DEFB113|245927|defensin, beta 113	NM_001037729|DEFB113|245927|defensin, beta 113
hg18_v1_chr3_+_70068440_70068563	0.215584	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr6_-_99957253_99957290	0.215554	SOX2.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr12_-_18134319_18134380	0.215283	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	CR618874|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg18_v1_chr5_+_140494971_140495201	0.21512	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr16_+_64958060_64958063	0.214838	SOX2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr4_-_83569853_83570272	0.214524	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr5_-_75044001_75044035	0.21403	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr8_+_36760999_36761058	0.21388	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg18_v1_chr5_-_147266257_147266293	0.213588	SOX2.p2	AY358656|C5orf46|389336|chromosome 5 open reading frame 46	AK289403|C5orf46|389336|chromosome 5 open reading frame 46	BC021680|C5orf46|389336|chromosome 5 open reading frame 46	NM_206966|C5orf46|389336|chromosome 5 open reading frame 46
hg18_v1_chr4_-_165523856_165523856	0.213236	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr22_+_28329649_28330080	0.213024	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg18_v1_chr6_-_66473790_66473838	0.212679	SOX2.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg18_v1_chr3_+_188130967_188131040	0.212377	SOX2.p2	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr1_+_99884018_99884485	0.212182	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr5_+_140605100_140605164	0.211656	SOX2.p2	AK312794|PCDHB15|56121|protocadherin beta 15	BC038797|PCDHB15|56121|protocadherin beta 15
hg18_v1_chr19_-_17236522_17236572	0.211392	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	CR599813|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg18_v1_chr5_+_90711887_90711949	0.211384	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr4_+_95898098_95898161	0.210981	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg18_v1_chr2_-_47986160_47986435	0.210348	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg18_v1_chr14_-_23623657_23623673	0.209911	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper
hg18_v1_chr8_-_120033240_120033563	0.209265	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr12_-_8584658_8584825	0.208858	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg18_v1_chr20_-_39680405_39680546	0.208651	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg18_v1_chr7_+_141457977_141458039	0.208544	SOX2.p2	AK000645|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111973|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111975|LOC93432|93432|maltase-glucoamylase-like pseudogene
hg18_v1_chr14_-_68689574_68689620	0.207906	SOX2.p2	BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr1_+_116744992_116745102	0.207736	SOX2.p2	CR614469|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr5_+_140509803_140510022	0.20746	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg18_v1_chr21_+_36364168_36364288	0.206534	SOX2.p2	CR594171|CBR1|873|carbonyl reductase 1	CR605960|CBR1|873|carbonyl reductase 1	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	CR607402|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1	CR604950|CBR1|873|carbonyl reductase 1
hg18_v1_chr8_+_76482661_76482825	0.206287	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr4_-_68766392_68766392	0.20627	SOX2.p2	AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like	NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like
hg18_v1_chr1_+_8928508_8928532	0.206166	SOX2.p2	NM_001215|CA6|765|carbonic anhydrase VI	AK300652|CA6|765|carbonic anhydrase VI	BC034350|CA6|765|carbonic anhydrase VI	M57892|CA6|765|carbonic anhydrase VI	AB102863|CA6|765|carbonic anhydrase VI	AB103091|CA6|765|carbonic anhydrase VI
hg18_v1_chr6_+_126282078_126282170	0.205978	SOX2.p2	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr16_+_64958086_64958120	0.205863	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr2_-_86418143_86418346	0.205205	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg18_v1_chr5_+_140532385_140532600	0.204921	SOX2.p2	AK315054|PCDHB7|56129|protocadherin beta 7	AK222560|PCDHB7|56129|protocadherin beta 7	AK024641|PCDHB7|56129|protocadherin beta 7	NM_018940|PCDHB7|56129|protocadherin beta 7	AK222678|PCDHB7|56129|protocadherin beta 7	BC098574|PCDHB7|56129|protocadherin beta 7	BC130331|PCDHB7|56129|protocadherin beta 7	BC130333|PCDHB7|56129|protocadherin beta 7	AF152500|PCDHB7|56129|protocadherin beta 7	AF217750|PCDHB7|56129|protocadherin beta 7
hg18_v1_chr1_-_49014993_49015176	0.204506	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg18_v1_chr15_-_91433165_91433550	0.204248	SOX2.p2	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg18_v1_chr5_+_128468785_128468878	0.203842	SOX2.p2	CR623281|ISOC1|51015|isochorismatase domain containing 1
hg18_v1_chr15_-_24513004_24513004	0.203482	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr5_+_140767953_140767953	0.20331	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg18_v1_chr12_-_25692754_25692754	0.203054	SOX2.p2	AK296816|IFLTD1|160492|intermediate filament tail domain containing 1	NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1
hg18_v1_chr2_+_15998090_15998188	0.202886	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg18_v1_chr11_-_55757236_55757312	0.202702	SOX2.p2	NM_001004746|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2	BC136876|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2
hg18_v1_chr2_-_55413253_55413327	0.202314	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chr13_+_45174446_45174446	0.202257	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr20_+_9406460_9406567	0.202196	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr10_+_111959978_111959978	0.202159	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg18_v1_chr5_-_95044415_95044469	0.202073	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr6_-_133076873_133076889	0.201769	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr15_-_23204887_23204952	0.201539	SOX2.p2	AB194232|UBE3A|7337|ubiquitin protein ligase E3A	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A	X98031|UBE3A|7337|ubiquitin protein ligase E3A	AF002225|UBE3A|7337|ubiquitin protein ligase E3A
hg18_v1_chr12_+_91620749_91620749	0.201289	SOX2.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg18_v1_chr18_+_29412538_29412576	0.200902	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg18_v1_chr7_+_44754978_44755054	0.200751	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr17_-_36451189_36451238	0.199954	SOX2.p2	AB055057|KRTAP1-1|81851|keratin associated protein 1-1	BC101152|KRTAP1-3|81850|keratin associated protein 1-3	AJ406926|KRTAP1-1|81851|keratin associated protein 1-1	BC105069|KRTAP1-1|81851|keratin associated protein 1-1	BC105071|KRTAP1-1|81851|keratin associated protein 1-1	BC069321|KRTAP1-1|81851|keratin associated protein 1-1	BC069450|KRTAP1-1|81851|keratin associated protein 1-1	AB052868|KRTAP1-1|81851|keratin associated protein 1-1	AB052934|KRTAP1-1|81851|keratin associated protein 1-1	NM_030967|KRTAP1-1|81851|keratin associated protein 1-1
hg18_v1_chr1_-_16411690_16411752	0.199707	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg18_v1_chr4_+_102954005_102954058	0.19951	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg18_v1_chr1_-_230717850_230717934	0.199361	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg18_v1_chr12_+_52713098_52713169	0.19927	SOX2.p2	NM_018953|HOXC5|3222|homeobox C5
hg18_v1_chrX_-_142432884_142432972	0.198897	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr12_-_119733062_119733071	0.198636	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase 3
hg18_v1_chr2_+_211050653_211050677	0.19845	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr5_-_172976196_172976210	0.198327	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr17_+_54997667_54997871	0.198297	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr10_+_22645304_22645357	0.198276	SOX2.p2	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	CR625344|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 read-through transcript	AY542159|COMMD3|23412|COMM domain containing 3	CR596018|COMMD3|23412|COMM domain containing 3	CR610659|COMMD3|23412|COMM domain containing 3	CR612205|COMMD3|23412|COMM domain containing 3
hg18_v1_chr14_-_106170414_106170713	0.198271	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr7_-_16811131_16811262	0.198111	SOX2.p2	BC015503|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	CR610899|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)
hg18_v1_chr11_-_18504939_18505072	0.197697	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chr11_-_123261549_123261549	0.197587	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg18_v1_chr6_+_168161401_168161429	0.197531	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg18_v1_chr7_-_76667045_76667100	0.197447	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr19_-_47623340_47623417	0.196916	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg18_v1_chr1_-_53566171_53566330	0.19674	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr1_+_211190631_211190661	0.196588	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg18_v1_chr9_+_124836666_124836666	0.196467	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr11_-_55942283_55942283	0.196388	SOX2.p2	NM_001004744|OR5R1|219479|olfactory receptor, family 5, subfamily R, member 1
hg18_v1_chr15_+_46285789_46285790	0.195894	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr8_+_40130143_40130362	0.195771	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	CR594872|C8orf4|56892|chromosome 8 open reading frame 4	CR620271|C8orf4|56892|chromosome 8 open reading frame 4	CR622918|C8orf4|56892|chromosome 8 open reading frame 4	CR600720|C8orf4|56892|chromosome 8 open reading frame 4	CR616793|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4	CR602517|C8orf4|56892|chromosome 8 open reading frame 4	CR618129|C8orf4|56892|chromosome 8 open reading frame 4	CR607025|C8orf4|56892|chromosome 8 open reading frame 4
hg18_v1_chr4_+_88790477_88790482	0.195546	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg18_v1_chr1_+_84402962_84402974	0.195458	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr3_-_170347019_170347093	0.195267	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr15_+_71953020_71953103	0.195123	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg18_v1_chr17_+_53761293_53761374	0.194585	SOX2.p2	AK311311|LOC100506779|100506779|hypothetical LOC100506779	AK311208|LOC100506779|100506779|hypothetical LOC100506779
hg18_v1_chr2_-_160765008_160765075	0.194583	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg18_v1_chr10_+_22765996_22766014	0.193775	SOX2.p2	AK295718|LOC100289455|100289455|hypothetical LOC100289455
hg18_v1_chr1_-_114156387_114156422	0.193714	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr11_-_123130435_123130462	0.193179	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg18_v1_chr1_+_181871830_181872100	0.193023	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr4_-_5940893_5940901	0.192953	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr1_-_171905593_171905625	0.192897	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg18_v1_chr5_+_125828685_125828745	0.192653	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr5_-_132189762_132189900	0.192208	SOX2.p2	BC104914|SHROOM1|134549|shroom family member 1	BC104916|SHROOM1|134549|shroom family member 1	BC143494|SHROOM1|134549|shroom family member 1	AF314142|SHROOM1|134549|shroom family member 1	NM_133456|SHROOM1|134549|shroom family member 1
hg18_v1_chr12_-_65359019_65359028	0.192008	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr5_+_10406980_10407037	0.191944	SOX2.p2	
hg18_v1_chr1_-_143708467_143708467	0.191767	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr5_+_76418545_76418662	0.191734	SOX2.p2	CR597892|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr17_+_72376022_72376500	0.19167	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg18_v1_chr6_+_123142559_123142638	0.191617	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr1_+_86785346_86785513	0.191545	SOX2.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg18_v1_chr3_+_66094324_66094324	0.191509	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr15_+_65217412_65217412	0.191202	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg18_v1_chr8_+_85258007_85258021	0.189947	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr2_-_36929520_36929549	0.189268	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr8_-_110415448_110415646	0.188805	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr2_-_165133239_165133262	0.1885	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr15_+_50098724_50098728	0.1884	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr20_-_42584087_42584097	0.187823	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg18_v1_chr10_-_17211795_17211884	0.187452	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg18_v1_chr16_+_14201687_14201711	0.187111	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr10_+_93548261_93548427	0.186966	SOX2.p2	AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr10_-_30958631_30958652	0.186911	SOX2.p2	AF139543|LYZL2|119180|lysozyme-like 2	BC066294|LYZL2|119180|lysozyme-like 2	NM_183058|LYZL2|119180|lysozyme-like 2
hg18_v1_chr10_-_135290288_135290288	0.186767	SOX2.p2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B
hg18_v1_chr5_-_41107161_41107200	0.186579	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg18_v1_chr3_-_188935363_188935388	0.186386	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr11_+_58146721_58146801	0.186359	SOX2.p2	BC069167|CNTF|1270|ciliary neurotrophic factor	NM_000614|CNTF|1270|ciliary neurotrophic factor	BC068030|CNTF|1270|ciliary neurotrophic factor	AK314118|CNTF|1270|ciliary neurotrophic factor	BC074963|CNTF|1270|ciliary neurotrophic factor	BC074964|CNTF|1270|ciliary neurotrophic factor	S72921|CNTF|1270|ciliary neurotrophic factor
hg18_v1_chr19_-_57924946_57924946	0.185989	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg18_v1_chr1_-_153107084_153107166	0.18587	SOX2.p2	
hg18_v1_chr1_-_51560469_51560525	0.185854	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg18_v1_chr2_+_203207912_203207957	0.185551	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr5_-_176833197_176833256	0.185547	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr3_+_29297806_29298130	0.185392	SOX2.p2	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chrX_+_149364377_149364504	0.185298	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg18_v1_chr1_-_159282376_159282407	0.184974	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg18_v1_chr5_+_70980724_70980762	0.184906	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg18_v1_chr6_+_123142344_123142452	0.184529	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr12_+_9713472_9713597	0.184227	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg18_v1_chr20_+_254205_254268	0.184132	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg18_v1_chr1_+_183281173_183281321	0.184094	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2	CR597914|RNF2|6045|ring finger protein 2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg18_v1_chr12_-_11041740_11041740	0.183893	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr5_+_138706029_138706097	0.183659	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr4_-_54119123_54119147	0.183649	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr14_-_19843918_19843965	0.183603	SOX2.p2	CR597562|TTC5|91875|tetratricopeptide repeat domain 5	CR600482|TTC5|91875|tetratricopeptide repeat domain 5	CR610331|TTC5|91875|tetratricopeptide repeat domain 5	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	CR608059|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr1_-_149698516_149698594	0.183534	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr7_+_111633972_111634041	0.183091	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg18_v1_chrX_-_47815944_47815944	0.183029	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chr14_-_23090606_23090714	0.182818	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr9_+_108665168_108665202	0.182659	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg18_v1_chr20_-_14266200_14266312	0.18209	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg18_v1_chr9_+_80134302_80134349	0.182086	SOX2.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr6_+_144649142_144649204	0.182036	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr17_+_29707583_29707706	0.181901	SOX2.p2	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13	U59808|CCL13|6357|chemokine (C-C motif) ligand 13	AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13	BC008621|CCL13|6357|chemokine (C-C motif) ligand 13	U46767|CCL13|6357|chemokine (C-C motif) ligand 13	X98306|CCL13|6357|chemokine (C-C motif) ligand 13	DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13	DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13	BT007385|CCL13|6357|chemokine (C-C motif) ligand 13	CR450337|CCL13|6357|chemokine (C-C motif) ligand 13	Z77650|CCL13|6357|chemokine (C-C motif) ligand 13
hg18_v1_chr14_+_96333434_96333503	0.181785	SOX2.p2	NM_003384|VRK1|7443|vaccinia related kinase 1	AK290110|VRK1|7443|vaccinia related kinase 1	BC103761|VRK1|7443|vaccinia related kinase 1	AB000449|VRK1|7443|vaccinia related kinase 1	BC112075|VRK1|7443|vaccinia related kinase 1	BC113510|VRK1|7443|vaccinia related kinase 1	CR608451|VRK1|7443|vaccinia related kinase 1	BC005970|VRK1|7443|vaccinia related kinase 1
hg18_v1_chr14_+_38772870_38773069	0.181701	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg18_v1_chr7_-_27190882_27190893	0.181644	SOX2.p2	CR612696|HOXA11|3207|homeobox A11
hg18_v1_chr17_-_45110339_45110523	0.181541	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	CR595475|SPOP|8405|speckle-type POZ protein	CR603514|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	CR592684|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	CR590571|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg18_v1_chr10_+_105717459_105717495	0.181499	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr12_-_6103945_6104096	0.181252	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg18_v1_chr11_+_20005704_20005712	0.181176	SOX2.p2	AK307574|NAV2|89797|neuron navigator 2
hg18_v1_chr8_-_72437020_72437039	0.180957	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr19_-_21742162_21742269	0.18081	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg18_v1_chr7_-_19778928_19778928	0.180377	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg18_v1_chr1_-_43410556_43410827	0.180258	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg18_v1_chr3_-_120861959_120862126	0.179406	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg18_v1_chr1_+_157526127_157526127	0.179066	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg18_v1_chr2_-_215957927_215957938	0.178887	SOX2.p2	U42458|FN1|2335|fibronectin 1
hg18_v1_chr1_-_115039614_115039761	0.178668	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg18_v1_chr2_-_188021117_188021265	0.178244	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr8_+_24207524_24207581	0.177675	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg18_v1_chr2_+_203208064_203208145	0.1775	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr6_+_16251260_16251318	0.176772	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr14_+_61653827_61653949	0.176677	SOX2.p2	CR626003|FLJ43390|646113|hypothetical LOC646113	BX248751|FLJ43390|646113|hypothetical LOC646113
hg18_v1_chr13_-_74799898_74799949	0.176675	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr10_+_122600843_122600927	0.176493	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr4_-_54119159_54119192	0.176376	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr12_-_98072602_98072806	0.176019	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	CR602042|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr15_+_72861767_72862051	0.175956	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg18_v1_chr10_+_86174665_86174686	0.175685	SOX2.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr2_-_215955206_215955292	0.175623	SOX2.p2	M14059|FN1|2335|fibronectin 1	M10905|FN1|2335|fibronectin 1
hg18_v1_chr20_+_41976831_41976971	0.175491	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg18_v1_chr11_+_58980986_58981009	0.175453	SOX2.p2	BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6
hg18_v1_chr5_-_39400319_39400411	0.175399	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg18_v1_chr1_-_160648429_160648551	0.1753	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr10_+_53744043_53744200	0.174562	SOX2.p2	NM_012242|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AK314902|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR625465|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594616|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR601383|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603553|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	BC001539|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AY359005|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594190|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR595444|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603030|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR605923|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591735|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR600818|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR604811|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR610857|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF127563|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF177394|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591322|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)
hg18_v1_chr12_-_102413875_102413878	0.174307	SOX2.p2	AK058052|C12orf42|374470|chromosome 12 open reading frame 42	BC039352|C12orf42|374470|chromosome 12 open reading frame 42	BC117392|C12orf42|374470|chromosome 12 open reading frame 42	BC117394|C12orf42|374470|chromosome 12 open reading frame 42	NM_198521|C12orf42|374470|chromosome 12 open reading frame 42	BC044617|C12orf42|374470|chromosome 12 open reading frame 42	NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42
hg18_v1_chr3_+_85858321_85858321	0.174153	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr14_-_101617680_101617795	0.173726	SOX2.p2	CR619460|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg18_v1_chr12_+_54611212_54611349	0.173725	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	CR616473|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg18_v1_chr5_+_176494690_176494747	0.173709	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr10_+_118340460_118340631	0.17346	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg18_v1_chrX_+_15435351_15435351	0.173197	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr2_+_135312655_135312722	0.173144	SOX2.p2	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase
hg18_v1_chr12_+_54106304_54106304	0.173021	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chr4_-_76817313_76817368	0.172824	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr2_+_214984705_214984705	0.17264	SOX2.p2	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like
hg18_v1_chr12_+_92595281_92595348	0.172496	SOX2.p2	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain
hg18_v1_chr3_+_103636548_103636566	0.172043	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg18_v1_chr7_+_100169184_100169184	0.172028	SOX2.p2	AF332975|ZAN|7455|zonadhesin	AF332976|ZAN|7455|zonadhesin	AF332977|ZAN|7455|zonadhesin	AF332978|ZAN|7455|zonadhesin	AF332979|ZAN|7455|zonadhesin	AF332980|ZAN|7455|zonadhesin	NM_003386|ZAN|7455|zonadhesin	NM_173059|ZAN|7455|zonadhesin
hg18_v1_chr9_-_113561613_113561633	0.171972	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr6_-_56816403_56816460	0.171944	SOX2.p2	U31850|DST|667|dystonin
hg18_v1_chr21_-_26345294_26345335	0.171864	SOX2.p2	
hg18_v1_chr11_-_129689524_129689559	0.171154	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr16_+_8714927_8714971	0.171154	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr21_-_31049566_31049616	0.171135	SOX2.p2	NM_181619|KRTAP21-1|337977|keratin associated protein 21-1	AB096960|KRTAP21-1|337977|keratin associated protein 21-1	BC105029|KRTAP21-1|337977|keratin associated protein 21-1	BC105031|KRTAP21-1|337977|keratin associated protein 21-1
hg18_v1_chr3_-_57505107_57505110	0.170322	SOX2.p2	AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12
hg18_v1_chr18_+_54013575_54013882	0.170102	SOX2.p2	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr6_-_46401174_46401352	0.170074	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2	CR604948|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr6_+_152053323_152053425	0.170069	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr13_-_40491491_40491507	0.169609	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chrX_+_10084984_10085125	0.168864	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg18_v1_chr12_-_55990512_55990512	0.168308	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg18_v1_chr1_+_111215343_111215361	0.1681	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr3_+_153014550_153014639	0.168022	SOX2.p2	NM_001086|AADAC|13|arylacetamide deacetylase (esterase)	L32179|AADAC|13|arylacetamide deacetylase (esterase)	BC020706|AADAC|13|arylacetamide deacetylase (esterase)	AK290628|AADAC|13|arylacetamide deacetylase (esterase)	CR624107|AADAC|13|arylacetamide deacetylase (esterase)	BC032309|AADAC|13|arylacetamide deacetylase (esterase)
hg18_v1_chr3_+_173954940_173955053	0.167826	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr12_-_10497195_10497245	0.167551	SOX2.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg18_v1_chr4_-_89963177_89963431	0.167485	SOX2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chr9_+_114289178_114289289	0.167399	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr1_-_198645695_198645785	0.167314	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr6_-_128883125_128883574	0.166773	SOX2.p2	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K
hg18_v1_chr19_+_10574055_10574212	0.166696	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr8_+_42315132_42315299	0.166508	SOX2.p2	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	CR624336|POLB|5423|polymerase (DNA directed), beta	CR623008|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	NM_002690|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg18_v1_chr4_+_155921876_155921949	0.166154	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg18_v1_chr3_-_57301749_57301749	0.166129	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr8_+_59486376_59486502	0.165937	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg18_v1_chr19_-_47790820_47790921	0.165722	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg18_v1_chr2_-_39517633_39517794	0.165239	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr8_+_110415725_110415813	0.16503	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chrX_+_118598325_118598325	0.164832	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr8_+_85258056_85258140	0.164702	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr14_-_72563497_72563672	0.163864	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg18_v1_chr5_+_65053749_65053956	0.163746	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr9_+_2707525_2707525	0.163614	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg18_v1_chr1_-_159282312_159282370	0.163566	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg18_v1_chr14_-_22521544_22521687	0.163561	SOX2.p2	BC034968|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_032876|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr14_+_76298693_76298917	0.163361	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg18_v1_chr1_-_70443748_70443849	0.163101	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg18_v1_chr5_+_148711419_148711529	0.162735	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr1_-_153109349_153109391	0.162716	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr2_+_14690290_14690315	0.162629	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg18_v1_chr12_-_122322117_122322775	0.162559	SOX2.p2	DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR604217|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR598800|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1
hg18_v1_chr2_-_73817935_73818024	0.162523	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg18_v1_chr2_+_216695062_216695162	0.161708	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr5_-_34078991_34079127	0.161703	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg18_v1_chr1_+_40631603_40631603	0.161656	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg18_v1_chr9_-_3213007_3213066	0.161637	SOX2.p2	
hg18_v1_chr19_-_6230797_6230809	0.161262	SOX2.p2	
hg18_v1_chr14_-_37134191_37134239	0.161259	SOX2.p2	NM_004496|FOXA1|3169|forkhead box A1
hg18_v1_chr8_-_95556460_95556531	0.16118	SOX2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr7_-_86526880_86526949	0.160732	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr10_+_115501202_115501202	0.160684	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr22_-_43783449_43783537	0.160498	SOX2.p2	AK299836|PHF21B|112885|PHD finger protein 21B	AK297317|PHF21B|112885|PHD finger protein 21B	AK091480|PHF21B|112885|PHD finger protein 21B
hg18_v1_chr12_+_54231249_54231277	0.160488	SOX2.p2	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4
hg18_v1_chr11_+_65027721_65028452	0.160434	SOX2.p2	
hg18_v1_chr15_+_66133709_66133721	0.160285	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr4_+_78651929_78651930	0.16002	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg18_v1_chr3_-_152541129_152541274	0.159616	SOX2.p2	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg18_v1_chr19_-_47498300_47498701	0.159584	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr14_-_54948290_54948328	0.159566	SOX2.p2	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg18_v1_chr2_+_237143118_237143220	0.159445	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7	CR616388|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg18_v1_chr11_+_22646229_22646229	0.158959	SOX2.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg18_v1_chr11_+_4571844_4571844	0.158879	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg18_v1_chr19_-_18578577_18578629	0.158824	SOX2.p2	AF059293|CRLF1|9244|cytokine receptor-like factor 1	BC044634|CRLF1|9244|cytokine receptor-like factor 1	AY358291|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chr16_-_20610078_20610078	0.158652	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg18_v1_chr12_-_11313907_11313907	0.158623	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chrX_+_135057202_135057397	0.158571	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr12_-_79855580_79855617	0.158525	SOX2.p2	AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)
hg18_v1_chr6_+_88024152_88024156	0.158186	SOX2.p2	BC016386|ZNF292|23036|zinc finger protein 292
hg18_v1_chr9_-_90983501_90983559	0.157991	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr19_-_53941835_53941979	0.157972	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg18_v1_chr10_+_90414125_90414195	0.157868	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr2_+_187163232_187163312	0.157845	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr5_+_140844810_140844927	0.157645	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg18_v1_chr5_-_76418661_76418937	0.157386	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg18_v1_chrX_-_128805400_128805619	0.157046	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr7_-_155019299_155019317	0.156737	SOX2.p2	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)	BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)	BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)	NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)	AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)
hg18_v1_chr15_+_22751162_22751284	0.156716	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR591152|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR604539|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593721|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR594630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR595630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599234|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593346|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599902|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr5_-_176833259_176833299	0.1566	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr1_+_9634368_9634415	0.15659	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg18_v1_chr9_-_37455250_37455271	0.156576	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr1_+_198975227_198975361	0.15644	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr5_+_140194152_140194152	0.156377	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg18_v1_chr2_+_85834111_85834922	0.15605	SOX2.p2	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)	AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)	BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)	AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)	BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)	AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)
hg18_v1_chr5_-_11956964_11957109	0.155955	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr5_-_78845414_78845455	0.155726	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg18_v1_chr2_-_20413838_20413962	0.155592	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr8_+_86563382_86563562	0.155232	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	CR613409|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	CR603817|CA2|760|carbonic anhydrase II	CR608877|CA2|760|carbonic anhydrase II	CR602161|CA2|760|carbonic anhydrase II	CR590312|CA2|760|carbonic anhydrase II	CR591919|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg18_v1_chr4_-_17415918_17416015	0.155043	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr4_-_47678187_47678306	0.155029	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr7_-_64088848_64088848	0.155028	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chr15_+_90815910_90815910	0.154736	SOX2.p2	AK057393|C15orf32|145858|chromosome 15 open reading frame 32	NM_153040|C15orf32|145858|chromosome 15 open reading frame 32
hg18_v1_chr12_-_109842736_109842786	0.154369	SOX2.p2	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow
hg18_v1_chr13_+_77213295_77213519	0.154357	SOX2.p2	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chr1_+_96959762_96959982	0.154018	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg18_v1_chr12_+_53809731_53809819	0.153941	SOX2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr14_-_102045749_102045823	0.153866	SOX2.p2	AK291868|ANKRD9|122416|ankyrin repeat domain 9	CR616439|ANKRD9|122416|ankyrin repeat domain 9	CR609368|ANKRD9|122416|ankyrin repeat domain 9
hg18_v1_chr19_+_52113772_52113772	0.153755	SOX2.p2	AB051509|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	AF159851|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC131565|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC150257|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	NM_004491|GRLF1|2909|glucocorticoid receptor DNA binding factor 1
hg18_v1_chr8_-_110762409_110762409	0.153512	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr1_-_230945065_230945095	0.153463	SOX2.p2	
hg18_v1_chr1_-_203592538_203592788	0.153389	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg18_v1_chr10_-_28631850_28632026	0.153176	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr2_-_169455167_169455208	0.153143	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	CR590224|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr4_+_53975597_53975627	0.153118	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr22_+_25347927_25347935	0.152695	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg18_v1_chr22_+_23925824_23925865	0.152678	SOX2.p2	NM_004076|CRYBB3|1417|crystallin, beta B3	U71216|CRYBB3|1417|crystallin, beta B3	BC069479|CRYBB3|1417|crystallin, beta B3	BC102021|CRYBB3|1417|crystallin, beta B3	BC102022|CRYBB3|1417|crystallin, beta B3	BC107482|CRYBB3|1417|crystallin, beta B3	CR456427|CRYBB3|1417|crystallin, beta B3
hg18_v1_chr6_-_131333173_131333315	0.152397	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr20_-_47963682_47963682	0.152396	SOX2.p2	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chr10_-_5050191_5050206	0.152207	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr17_+_65582981_65583070	0.151547	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr12_-_21649019_21649047	0.151328	SOX2.p2	AK308373|GYS2|2998|glycogen synthase 2 (liver)	D29685|GYS2|2998|glycogen synthase 2 (liver)	NM_021957|GYS2|2998|glycogen synthase 2 (liver)
hg18_v1_chr17_+_63252704_63252719	0.1513	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr9_-_40782062_40782111	0.151124	SOX2.p2	AK057375|ZNF658|26149|zinc finger protein 658	AK292150|ZNF658|26149|zinc finger protein 658	NM_033160|ZNF658|26149|zinc finger protein 658
hg18_v1_chr12_+_48443232_48443347	0.150926	SOX2.p2	CR624817|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr10_+_96433240_96433566	0.150917	SOX2.p2	NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18
hg18_v1_chr13_-_40491405_40491482	0.150636	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr17_-_53847937_53848133	0.150324	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg18_v1_chr2_-_208697441_208697557	0.15025	SOX2.p2	U66583|CRYGD|1421|crystallin, gamma D	BC117338|CRYGD|1421|crystallin, gamma D	BC117340|CRYGD|1421|crystallin, gamma D	NM_006891|CRYGD|1421|crystallin, gamma D
hg18_v1_chr1_-_21249974_21249981	0.150194	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr10_+_70150936_70151043	0.150052	SOX2.p2	AF465616|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK023438|CCAR1|55749|cell division cycle and apoptosis regulator 1	NM_018237|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307550|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK298004|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC058846|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK001701|CCAR1|55749|cell division cycle and apoptosis regulator 1	AY249140|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK122871|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK292649|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK299307|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307704|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307671|CCAR1|55749|cell division cycle and apoptosis regulator 1	BX647943|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC130626|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC132725|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC144118|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC108682|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr15_+_63609895_63610058	0.149994	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr8_-_20084892_20084996	0.149971	SOX2.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR621905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR593627|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg18_v1_chrX_-_138742050_138742112	0.149958	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr1_+_43410587_43410679	0.149955	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	NM_001167966|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg18_v1_chr2_+_204440753_204440910	0.149752	SOX2.p2	NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4
hg18_v1_chr7_+_96583840_96583840	0.149537	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr12_-_10142779_10142930	0.149381	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr3_-_127138571_127138576	0.149195	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg18_v1_chr2_-_217248967_217249092	0.149021	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr10_+_35524835_35524959	0.148996	SOX2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr2_-_232034638_232034709	0.148823	SOX2.p2	AK001314|NCL|4691|nucleolin
hg18_v1_chr11_-_123030091_123030351	0.148708	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chrX_+_100220491_100220527	0.148598	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg18_v1_chr19_+_47498089_47498123	0.148154	SOX2.p2	BC063021|PRR19|284338|proline rich 19	AK291528|PRR19|284338|proline rich 19	NM_199285|PRR19|284338|proline rich 19
hg18_v1_chr10_+_170423_170423	0.14767	SOX2.p2	NM_001161482|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg18_v1_chr1_-_85703198_85703228	0.14739	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr13_+_94883853_94883858	0.147364	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg18_v1_chr2_+_102744921_102744973	0.147176	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr11_+_55617328_55617359	0.147084	SOX2.p2	BC137007|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	BC137008|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	NM_001003750|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2
hg18_v1_chr3_+_99671013_99671110	0.147066	SOX2.p2	BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1
hg18_v1_chrX_+_41077594_41077594	0.146811	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr14_+_19458580_19458605	0.146734	SOX2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr17_-_10362583_10362583	0.14656	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr5_+_132456293_132456311	0.146229	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr1_-_247086686_247086776	0.146135	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	CR613756|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg18_v1_chr11_+_123625632_123625632	0.146127	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg18_v1_chrX_+_44617346_44617414	0.145805	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chr21_-_39642808_39642873	0.145573	SOX2.p2	BC071643|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619497|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619783|HMGN1|3150|high-mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high-mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high-mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr4_-_20594645_20594809	0.145409	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr12_+_123023521_123023844	0.145028	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg18_v1_chr11_-_6773589_6773714	0.144676	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg18_v1_chr5_-_178977441_178977522	0.144602	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr11_+_61491793_61492028	0.144545	SOX2.p2	AK093779|LOC399900|399900|hypothetical LOC399900	BC132894|LOC399900|399900|hypothetical LOC399900	BC132896|LOC399900|399900|hypothetical LOC399900
hg18_v1_chr12_-_31368347_31368362	0.144444	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr15_+_29406335_29406925	0.144165	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg18_v1_chr6_+_72653126_72653172	0.144152	SOX2.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr7_+_94953148_94953310	0.144032	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg18_v1_chr7_+_38984133_38984133	0.143649	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr12_+_51730101_51730233	0.143243	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr16_+_24459173_24459557	0.143218	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr17_-_26648375_26648505	0.143202	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg18_v1_chr8_+_7731402_7731402	0.142753	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr2_+_208284484_208284609	0.142722	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr9_-_114814286_114814292	0.142634	SOX2.p2	CR602666|ZNF883|169834|zinc finger protein 883	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg18_v1_chr12_+_99185334_99185679	0.142379	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr19_+_11510578_11510740	0.142321	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	CR620483|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle	CR615873|CNN1|1264|calponin 1, basic, smooth muscle
hg18_v1_chr6_+_36318922_36318957	0.142221	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg18_v1_chr4_+_91035025_91035145	0.142142	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr12_+_52132353_52132414	0.142082	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	CR602496|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr15_-_93671314_93671332	0.141796	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr19_-_49597594_49597623	0.141705	SOX2.p2	AL833447|ZNF285|26974|zinc finger protein 285	AK302594|ZFP112|7771|zinc finger protein 112 homolog (mouse)	NM_152354|ZNF285|26974|zinc finger protein 285
hg18_v1_chr19_+_43089720_43089785	0.141602	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg18_v1_chr8_+_32623792_32623792	0.141329	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr15_-_43267139_43267327	0.141268	SOX2.p2	CR607464|SHF|90525|Src homology 2 domain containing F	CR626127|SHF|90525|Src homology 2 domain containing F	CR610652|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr3_+_150065732_150065784	0.141225	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg18_v1_chr10_-_98263434_98263672	0.140978	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg18_v1_chr5_+_132237253_132237258	0.140853	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chr9_+_76302071_76302118	0.140748	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg18_v1_chr21_+_34112456_34112625	0.140575	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr2_+_155263338_155263533	0.140443	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg18_v1_chr6_-_33016561_33016824	0.140438	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr17_-_16413188_16413254	0.14032	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg18_v1_chr10_-_98109048_98109081	0.140017	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg18_v1_chr6_-_35804337_35804337	0.139913	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr6_+_47857733_47857761	0.139213	SOX2.p2	BC126194|OPN5|221391|opsin 5	BC126198|OPN5|221391|opsin 5	NM_181744|OPN5|221391|opsin 5	AY377391|OPN5|221391|opsin 5	AY288419|OPN5|221391|opsin 5
hg18_v1_chr1_+_103898844_103898844	0.139141	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg18_v1_chr5_+_161210280_161210394	0.138805	SOX2.p2	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr1_+_26896519_26896593	0.138717	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr4_-_107508040_107508040	0.138386	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg18_v1_chr2_+_208284610_208284670	0.138198	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr6_+_80771040_80771102	0.137999	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg18_v1_chr3_+_73128771_73128849	0.137731	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr8_-_17624009_17624009	0.137626	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr2_+_99344060_99344285	0.137519	SOX2.p2	AL133563|EIF5B|9669|eukaryotic translation initiation factor 5B	CR604527|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr10_+_91451313_91451398	0.13736	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg18_v1_chr2_+_228386800_228386871	0.137027	SOX2.p2	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg18_v1_chr12_+_69046241_69046826	0.13701	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr2_+_33213111_33213308	0.136534	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chr2_+_101235695_101235779	0.136463	SOX2.p2	CR611582|C2orf29|55571|chromosome 2 open reading frame 29	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr21_+_44856423_44856429	0.136338	SOX2.p2	AB076355|KRTAP10-8|386681|keratin associated protein 10-8	NM_198695|KRTAP10-8|386681|keratin associated protein 10-8	BC127016|KRTAP10-8|386681|keratin associated protein 10-8
hg18_v1_chr6_+_72653420_72653447	0.136238	SOX2.p2	AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr16_-_57309625_57309654	0.13608	SOX2.p2	CR612588|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)
hg18_v1_chr6_+_72653369_72653379	0.135994	SOX2.p2	BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1	BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr11_+_63510876_63510903	0.135869	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr6_-_13922525_13922969	0.135699	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr6_+_80771108_80771128	0.135628	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg18_v1_chr20_+_54541672_54541766	0.135593	SOX2.p2	BC014951|C20orf107|388799|chromosome 20 open reading frame 107	NM_001013646|C20orf107|388799|chromosome 20 open reading frame 107	CR593795|C20orf107|388799|chromosome 20 open reading frame 107
hg18_v1_chr15_+_66133625_66133708	0.13537	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr20_-_3710060_3710112	0.135338	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg18_v1_chr4_-_104240413_104240485	0.135134	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR601062|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR625169|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR599040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR605040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg18_v1_chrX_+_84385649_84385658	0.135079	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg18_v1_chr7_-_142769266_142769294	0.134958	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg18_v1_chr7_+_26158257_26158660	0.13483	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chr11_-_5130174_5130174	0.13468	SOX2.p2	BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1
hg18_v1_chr18_-_22699650_22699717	0.134522	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr12_+_50633430_50633430	0.134277	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr10_-_21475493_21475493	0.134274	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg18_v1_chr9_+_18464090_18464103	0.134173	SOX2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr14_-_37133927_37133988	0.133365	SOX2.p2	AM392863|FOXA1|3169|forkhead box A1	AM393239|FOXA1|3169|forkhead box A1	AM393310|FOXA1|3169|forkhead box A1	AM393369|FOXA1|3169|forkhead box A1	BC033890|FOXA1|3169|forkhead box A1
hg18_v1_chr6_-_41148061_41148332	0.133005	SOX2.p2	CR620893|C6orf130|221443|chromosome 6 open reading frame 130	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg18_v1_chr11_-_35398077_35398185	0.13282	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr15_+_32048380_32048380	0.132592	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr1_+_246617532_246617532	0.132583	SOX2.p2	NM_001005471|OR2T6|254879|olfactory receptor, family 2, subfamily T, member 6
hg18_v1_chr12_-_52939636_52939640	0.132548	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chr7_-_99536214_99536321	0.13215	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr1_-_175400665_175400731	0.131909	SOX2.p2	AK309094|ASTN1|460|astrotactin 1
hg18_v1_chr19_-_49131250_49131299	0.131798	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg18_v1_chr13_-_93929719_93929936	0.13136	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr12_-_18782184_18782257	0.131335	SOX2.p2	AF532185|PLCZ1|89869|phospholipase C, zeta 1	NM_033123|PLCZ1|89869|phospholipase C, zeta 1	AK314516|PLCZ1|89869|phospholipase C, zeta 1	AY035866|PLCZ1|89869|phospholipase C, zeta 1	AK292279|PLCZ1|89869|phospholipase C, zeta 1
hg18_v1_chr16_-_70474912_70474944	0.131043	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr20_-_43609409_43609478	0.130736	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	BC003675|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg18_v1_chr21_-_39642712_39642807	0.130658	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr11_-_70350292_70350362	0.130636	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr9_-_74735669_74735747	0.130528	SOX2.p2	CR601139|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg18_v1_chr17_-_53761119_53761150	0.130487	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg18_v1_chr12_-_9987277_9987303	0.130442	SOX2.p2	CR625615|LOC100506159|100506159|hypothetical LOC100506159
hg18_v1_chr17_+_58625086_58625100	0.130399	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr8_+_118216517_118216517	0.130108	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr9_+_114376709_114376794	0.129919	SOX2.p2	AK056181|KIAA1958|158405|KIAA1958
hg18_v1_chr9_-_28709302_28709302	0.129814	SOX2.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg18_v1_chr8_+_23157094_23157113	0.12976	SOX2.p2	AK097202|CHMP7|91782|CHMP family, member 7	NM_152272|CHMP7|91782|CHMP family, member 7	BC042050|CHMP7|91782|CHMP family, member 7
hg18_v1_chr7_-_108311872_108311872	0.129378	SOX2.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr17_-_36294962_36295023	0.12937	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr7_-_32077504_32077569	0.129088	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg18_v1_chr2_+_208284691_208284800	0.128934	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr11_+_125208420_125208420	0.128905	SOX2.p2	AK123042|PATE4|399968|prostate and testis expressed 4	AK311509|PATE4|399968|prostate and testis expressed 4	NM_001144874|PATE4|399968|prostate and testis expressed 4
hg18_v1_chr1_-_210070736_210070771	0.128876	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr11_+_5798119_5798141	0.128845	SOX2.p2	BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2	NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2
hg18_v1_chr8_-_7320013_7320013	0.128644	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr1_+_169549996_169550109	0.128582	SOX2.p2	BC002780|FMO4|2329|flavin containing monooxygenase 4	NM_002022|FMO4|2329|flavin containing monooxygenase 4	Z11737|FMO4|2329|flavin containing monooxygenase 4
hg18_v1_chr6_+_35812836_35812836	0.128447	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg18_v1_chr5_-_99898788_99898849	0.12824	SOX2.p2	
hg18_v1_chr13_-_31900218_31900499	0.127998	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg18_v1_chr2_+_207512522_207512568	0.127966	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg18_v1_chr1_+_35623688_35623720	0.127897	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg18_v1_chr21_+_39099717_39099777	0.127792	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr6_+_45404031_45404037	0.127647	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg18_v1_chr1_+_209586328_209586328	0.127641	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr14_+_74353417_74353490	0.127638	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg18_v1_chr4_-_95482994_95483049	0.127594	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr4_-_158111995_158112023	0.127275	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr9_-_35738875_35739029	0.12706	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr1_-_111771877_111771921	0.126385	SOX2.p2	U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa	NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa
hg18_v1_chr3_+_20056527_20056527	0.126202	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr9_-_90983195_90983374	0.126145	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr4_+_144654526_144654603	0.126081	SOX2.p2	
hg18_v1_chr12_+_115833093_115833245	0.12602	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg18_v1_chrX_+_119379967_119380024	0.12574	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg18_v1_chr13_-_106018445_106018528	0.125729	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg18_v1_chr15_+_50098700_50098723	0.125728	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chrX_+_48252290_48252420	0.125728	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	CR623014|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr21_-_30908093_30908119	0.125708	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr17_+_73511843_73511912	0.125692	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr9_-_101621964_101622008	0.125682	SOX2.p2	
hg18_v1_chr15_-_39623750_39623763	0.125656	SOX2.p2	AK022794|RPAP1|26015|RNA polymerase II associated protein 1	NM_015540|RPAP1|26015|RNA polymerase II associated protein 1	AK308884|RPAP1|26015|RNA polymerase II associated protein 1
hg18_v1_chr13_+_23742846_23742950	0.125497	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr2_+_68445821_68445931	0.125426	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg18_v1_chr2_+_15998010_15998020	0.125426	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg18_v1_chr1_-_199259133_199259221	0.125285	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg18_v1_chr21_-_33107813_33107922	0.125223	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg18_v1_chr11_+_7229717_7229822	0.124718	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg18_v1_chr10_+_18280773_18280897	0.124664	SOX2.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg18_v1_chr14_+_38720085_38720227	0.124315	SOX2.p2	CR603037|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr14_-_21108714_21108714	0.123896	SOX2.p2	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3
hg18_v1_chr1_-_205210567_205210592	0.12378	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr15_-_32398220_32398320	0.123549	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg18_v1_chr7_+_29486010_29486010	0.123356	SOX2.p2	NM_001039936|CHN2|1124|chimerin (chimaerin) 2
hg18_v1_chr5_-_125956996_125956999	0.123315	SOX2.p2	CR595547|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1
hg18_v1_chr6_+_148705817_148705952	0.122868	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr17_+_3324096_3324153	0.122785	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg18_v1_chr17_-_36577949_36577949	0.122503	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg18_v1_chr9_+_115382760_115382760	0.122333	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr11_+_68124400_68124505	0.122291	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg18_v1_chr15_+_20444140_20444149	0.122265	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr9_-_36266930_36267052	0.12199	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg18_v1_chr2_+_211166323_211166337	0.121967	SOX2.p2	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr8_+_76614757_76614781	0.121555	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr1_+_238321794_238321807	0.12153	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg18_v1_chr12_-_8706746_8706753	0.121528	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr2_-_98646367_98646367	0.121423	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr14_-_23846993_23846995	0.12131	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr2_+_220017617_220017638	0.121198	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg18_v1_chr20_-_42584006_42584086	0.121179	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg18_v1_chr9_+_15412630_15412786	0.121174	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr8_-_124622434_124622628	0.120971	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr5_+_79651545_79651598	0.120965	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr19_+_10626106_10626230	0.120873	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr4_-_77163609_77163673	0.120726	SOX2.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr19_-_18578631_18578661	0.120457	SOX2.p2	AF073515|CRLF1|9244|cytokine receptor-like factor 1	NM_004750|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chrX_-_76928142_76928232	0.120324	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr5_+_78567604_78567690	0.120229	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr17_-_36594652_36594672	0.120196	SOX2.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg18_v1_chr6_+_121798443_121798605	0.12012	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg18_v1_chr13_-_98757634_98757749	0.120095	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr4_-_109308893_109309603	0.120024	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr10_+_22645370_22645412	0.119887	SOX2.p2	CR623274|COMMD3|23412|COMM domain containing 3
hg18_v1_chr9_+_123501186_123501469	0.119596	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg18_v1_chr11_-_118740069_118740116	0.11941	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr10_-_128199986_128199999	0.11917	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg18_v1_chr1_+_165075345_165075394	0.119094	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr6_-_135417522_135417641	0.118988	SOX2.p2	EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)	EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)	BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)	BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)
hg18_v1_chr5_+_36912656_36912999	0.118978	SOX2.p2	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)	BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)	BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)	AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr1_+_110361634_110361667	0.118581	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr10_+_90474280_90474280	0.118346	SOX2.p2	EF426482|LIPK|643414|lipase, family member K	NM_001080518|LIPK|643414|lipase, family member K
hg18_v1_chr11_-_118406780_118406829	0.11832	SOX2.p2	BC014663|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AB209026|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK294993|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK298395|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK300646|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK289642|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	CR606876|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK312628|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164277|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164278|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164279|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001467|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg18_v1_chr1_+_67404756_67404756	0.118174	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg18_v1_chr2_+_218972963_218973087	0.118171	SOX2.p2	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chr12_-_11178109_11178109	0.118122	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg18_v1_chr11_+_4564596_4564596	0.118079	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg18_v1_chr14_-_59264044_59264183	0.11755	SOX2.p2	DQ355431|RTN1|6252|reticulon 1	L10334|RTN1|6252|reticulon 1	NM_206857|RTN1|6252|reticulon 1
hg18_v1_chr11_-_125055884_125056151	0.117396	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1	NM_020109|ACRV1|56|acrosomal vesicle protein 1	NM_020110|ACRV1|56|acrosomal vesicle protein 1	NM_020111|ACRV1|56|acrosomal vesicle protein 1	NM_020113|ACRV1|56|acrosomal vesicle protein 1	NM_020115|ACRV1|56|acrosomal vesicle protein 1
hg18_v1_chr1_-_202730135_202730642	0.117394	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chr5_+_161427225_161427621	0.117318	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg18_v1_chr2_+_172530120_172530246	0.117109	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chrX_+_37735013_37735036	0.117001	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg18_v1_chr17_-_38979178_38979327	0.116957	SOX2.p2	AK315961|ETV4|2118|ets variant 4	U18018|ETV4|2118|ets variant 4	NM_001079675|ETV4|2118|ets variant 4
hg18_v1_chr18_+_59521173_59521173	0.116812	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg18_v1_chr3_+_156280129_156280157	0.116703	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr5_-_14706486_14706500	0.116427	SOX2.p2	
hg18_v1_chr2_-_164300758_164300768	0.116385	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr15_-_39973566_39973566	0.116381	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg18_v1_chr13_+_96884682_96884725	0.116376	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr9_-_90456824_90456894	0.116356	SOX2.p2	BC101432|LOC286238|286238|hypothetical protein LOC286238	BC101439|LOC286238|286238|hypothetical protein LOC286238	BC101440|LOC286238|286238|hypothetical protein LOC286238	BC101442|LOC286238|286238|hypothetical protein LOC286238	AK098532|LOC286238|286238|hypothetical protein LOC286238	NM_001100111|LOC286238|286238|hypothetical protein LOC286238
hg18_v1_chr12_+_7174230_7174553	0.116075	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3
hg18_v1_chr9_-_112139908_112139945	0.115657	SOX2.p2	AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)
hg18_v1_chr15_-_43458247_43458271	0.115579	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr8_+_7340777_7340877	0.11542	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg18_v1_chr11_+_62893836_62894104	0.115074	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg18_v1_chr7_+_129771865_129771936	0.115044	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr14_-_23847000_23847016	0.114932	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr7_+_129693938_129693963	0.114774	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg18_v1_chr7_-_142293382_142293628	0.114651	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg18_v1_chr19_+_56506907_56506913	0.114521	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg18_v1_chr11_-_70350509_70350520	0.114468	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chrX_-_138114817_138114833	0.114456	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr20_-_55718351_55718439	0.114451	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chrX_+_128501862_128502097	0.114032	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr12_-_106679054_106679209	0.113966	SOX2.p2	BC068562|PRDM4|11108|PR domain containing 4
hg18_v1_chr7_+_116182676_116182699	0.113895	SOX2.p2	
hg18_v1_chr14_-_59166976_59167061	0.113802	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1	CR591662|RTN1|6252|reticulon 1
hg18_v1_chr3_-_58538110_58538189	0.113779	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	CR607139|FAM107A|11170|family with sequence similarity 107, member A	CR610702|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	CR601858|FAM107A|11170|family with sequence similarity 107, member A	CR621351|FAM107A|11170|family with sequence similarity 107, member A	CR617615|FAM107A|11170|family with sequence similarity 107, member A	CR591615|FAM107A|11170|family with sequence similarity 107, member A	CR609117|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	CR600423|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr4_+_72321113_72321188	0.113759	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr1_-_114156429_114156620	0.113707	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr22_+_42138034_42138088	0.113578	SOX2.p2	AK289774|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chr15_-_75364387_75364387	0.113397	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr8_-_110411283_110411338	0.113305	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr4_+_154397975_154398004	0.113278	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr15_+_20444124_20444136	0.113147	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr3_-_15515382_15515382	0.113129	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr3_-_147805715_147805799	0.113118	SOX2.p2	BC157886|PLSCR5|389158|phospholipid scramblase family, member 5	BC171917|PLSCR5|389158|phospholipid scramblase family, member 5	CR591144|PLSCR5|389158|phospholipid scramblase family, member 5
hg18_v1_chrX_-_43717864_43717864	0.113079	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr13_-_40604587_40605003	0.11302	SOX2.p2	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg18_v1_chr21_-_32026276_32026338	0.113001	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr13_+_48582389_48582525	0.112986	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr3_-_48204332_48204532	0.112967	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg18_v1_chr14_+_22410795_22410927	0.112951	SOX2.p2	NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10	CR626435|LRP10|26020|low density lipoprotein receptor-related protein 10	AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10	BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10
hg18_v1_chr7_-_16471817_16471998	0.112909	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	CR614752|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	CR606874|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg18_v1_chr12_+_9033403_9033498	0.112725	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg18_v1_chr3_+_184836049_184836139	0.112694	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr18_-_62422195_62422388	0.11262	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg18_v1_chr11_+_113436438_113436497	0.112594	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg18_v1_chr3_-_99236520_99236520	0.112591	SOX2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr20_-_42584100_42584143	0.112224	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	CR617136|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg18_v1_chr5_-_137882303_137882450	0.112195	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr17_+_65009986_65010164	0.112126	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr15_-_63457378_63457430	0.112029	SOX2.p2	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3
hg18_v1_chr3_-_188492163_188492503	0.11199	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg18_v1_chr6_-_56824371_56824452	0.111871	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chr4_-_24195243_24195273	0.111772	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr5_+_140751666_140751666	0.111743	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg18_v1_chr3_+_123526700_123526829	0.111648	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg18_v1_chr19_+_63053031_63053218	0.111571	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg18_v1_chr5_+_140146059_140146059	0.111544	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg18_v1_chr22_-_35428848_35428848	0.111481	SOX2.p2	NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2
hg18_v1_chrX_+_133952633_133952722	0.111443	SOX2.p2	BC008642|LOC644538|644538|hypothetical protein LOC644538	NM_001163438|LOC644538|644538|hypothetical protein LOC644538
hg18_v1_chr6_+_73133152_73133205	0.111314	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr9_-_21295311_21295311	0.11105	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr15_-_49830941_49831073	0.110917	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg18_v1_chr3_+_186786655_186786900	0.110829	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg18_v1_chr18_-_21186107_21186215	0.110756	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr3_+_88270951_88270951	0.110705	SOX2.p2	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr12_-_52407470_52407573	0.110652	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg18_v1_chr5_+_178300799_178300843	0.110609	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg18_v1_chr7_+_68702516_68702532	0.110556	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg18_v1_chr11_+_117680504_117680877	0.110549	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr4_+_1842947_1843045	0.110264	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr1_-_41398126_41398191	0.110223	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr6_-_46401363_46401489	0.110172	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2	NM_005822|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr6_+_27400518_27400556	0.110137	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg18_v1_chr12_-_7739591_7739655	0.110116	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr2_+_148318770_148318841	0.110102	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr22_-_37480898_37480961	0.11006	SOX2.p2	AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2	AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr17_+_7682355_7682441	0.109776	SOX2.p2	
hg18_v1_chr19_-_43995579_43995579	0.109696	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg18_v1_chr6_+_62341966_62341966	0.109619	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr10_-_25281510_25281567	0.109509	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	CR615591|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg18_v1_chr4_+_47403107_47403116	0.109489	SOX2.p2	
hg18_v1_chr20_-_57940567_57940603	0.109484	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg18_v1_chr19_-_52426055_52426316	0.109388	SOX2.p2	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg18_v1_chr4_+_41678469_41678596	0.109315	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg18_v1_chr6_+_154373323_154373328	0.109089	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr2_+_207115060_207115102	0.109074	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr12_+_52132176_52132244	0.109037	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr2_+_10009242_10009361	0.108999	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg18_v1_chr8_-_38444398_38444519	0.108954	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr11_-_48330574_48330574	0.108948	SOX2.p2	NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45
hg18_v1_chr2_+_165804157_165804200	0.108914	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr4_-_185921384_185921392	0.108799	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr14_-_26136799_26136858	0.108792	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg18_v1_chr8_+_145158432_145158594	0.10872	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chr10_-_14686243_14686404	0.108714	SOX2.p2	CR610285|FAM107B|83641|family with sequence similarity 107, member B	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr4_-_113777470_113777521	0.10861	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr9_-_37455384_37455406	0.108571	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr2_+_148318520_148318654	0.108528	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr8_+_85258257_85258323	0.10852	SOX2.p2	AK095026|RALYL|138046|RALY RNA binding protein-like
hg18_v1_chr12_-_15005761_15005869	0.108516	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr7_+_50106227_50106227	0.108443	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr18_-_52456837_52456988	0.108442	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr3_+_173043832_173043852	0.108426	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg18_v1_chr4_+_2790338_2790338	0.108305	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr10_-_14686413_14686457	0.108238	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chrX_-_128616594_128616613	0.108149	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg18_v1_chr14_-_23847024_23847028	0.107867	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr1_+_243065215_243065449	0.107823	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr1_+_90233238_90233371	0.107806	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr15_+_20444155_20444160	0.107693	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chrX_+_41468351_41468377	0.107562	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg18_v1_chr1_+_87569959_87570047	0.107514	SOX2.p2	CR599134|LMO4|8543|LIM domain only 4	BC065818|LMO4|8543|LIM domain only 4
hg18_v1_chr11_-_121492010_121492132	0.107466	SOX2.p2	BC130361|BLID|414899|BH3-like motif containing, cell death inducer	BC130363|BLID|414899|BH3-like motif containing, cell death inducer	AF303179|BLID|414899|BH3-like motif containing, cell death inducer	NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer
hg18_v1_chr11_-_1586190_1586268	0.107448	SOX2.p2	AY597812|KRTAP5-3|387266|keratin associated protein 5-3	AB126072|KRTAP5-3|387266|keratin associated protein 5-3	NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3
hg18_v1_chr4_-_113656762_113656786	0.107435	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr1_-_79244948_79245082	0.107283	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg18_v1_chr2_-_70329067_70329379	0.107255	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr9_+_115382990_115383028	0.107142	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr18_+_41558089_41558115	0.10705	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr2_+_101235782_101235867	0.106995	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chrX_-_100759562_100759646	0.106928	SOX2.p2	CR599653|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR624030|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR598648|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR614615|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR591698|ARMCX6|54470|armadillo repeat containing, X-linked 6	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg18_v1_chr21_-_39642935_39642949	0.106745	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr11_-_69343128_69343128	0.106706	SOX2.p2	NM_005247|FGF3|2248|fibroblast growth factor 3
hg18_v1_chr22_-_48866484_48866484	0.106497	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr12_+_62523648_62524339	0.106263	SOX2.p2	
hg18_v1_chr1_-_68688219_68688229	0.106006	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg18_v1_chr21_-_31107431_31107440	0.105883	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr11_+_20001130_20001211	0.105875	SOX2.p2	NM_001111019|NAV2|89797|neuron navigator 2
hg18_v1_chr5_-_140680470_140680517	0.105768	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr7_+_93862137_93862278	0.105759	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr6_+_12622286_12622290	0.105672	SOX2.p2	
hg18_v1_chr4_-_158111504_158111830	0.105664	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr13_+_97593411_97593434	0.105617	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr12_-_38123027_38123505	0.10531	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	CR624607|KIF21A|55605|kinesin family member 21A	CR624190|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg18_v1_chr19_-_18578467_18578574	0.105008	SOX2.p2	EU832355|CRLF1|9244|cytokine receptor-like factor 1	EU832440|CRLF1|9244|cytokine receptor-like factor 1	AF178684|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chr17_-_16038607_16038680	0.105001	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr3_+_148593911_148593934	0.104964	SOX2.p2	
hg18_v1_chr4_-_91979113_91979291	0.104933	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr1_+_181028016_181028016	0.104868	SOX2.p2	AF338436|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
hg18_v1_chr4_-_164754106_164754225	0.104837	SOX2.p2	CR607777|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr19_+_45948598_45948688	0.104783	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597793|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR606390|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597355|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR602490|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR607723|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611065|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620163|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614230|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr7_-_148212292_148212309	0.104766	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr16_+_56327168_56327282	0.104602	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg18_v1_chr4_+_41235077_41235091	0.104596	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr14_-_54720101_54720218	0.104501	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg18_v1_chr4_-_5941043_5941138	0.104311	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	CR608807|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr15_+_20444164_20444192	0.104249	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr2_-_38683477_38683516	0.104229	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr17_-_20886680_20887049	0.10421	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg18_v1_chr2_-_38683518_38683571	0.104088	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr7_+_20653490_20653742	0.103909	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	CR595059|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg18_v1_chr3_-_47798337_47798339	0.103799	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr14_-_60260780_60260841	0.103738	SOX2.p2	AK309358|SIX4|51804|SIX homeobox 4
hg18_v1_chr4_-_147662318_147662574	0.103661	SOX2.p2	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
hg18_v1_chr6_+_26070957_26071068	0.103639	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr5_-_41546384_41546486	0.103574	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr1_+_42773146_42773146	0.103509	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr14_-_23107106_23107118	0.103472	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chr11_+_129496792_129496884	0.103179	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chrX_+_110074124_110074282	0.103068	SOX2.p2	AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg18_v1_chr2_-_98713862_98713994	0.103042	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr2_-_152299229_152299246	0.102677	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr1_+_10995265_10995330	0.102651	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr2_-_20375497_20375564	0.102639	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr15_-_31147376_31147679	0.102559	SOX2.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg18_v1_chr1_+_11461764_11461881	0.102515	SOX2.p2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg18_v1_chr3_-_117647053_117647074	0.102496	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr4_+_68107039_68107122	0.102409	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr5_+_86599575_86599589	0.102391	SOX2.p2	
hg18_v1_chr17_+_36642240_36642277	0.102366	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg18_v1_chr3_-_47798308_47798336	0.102269	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr12_-_16650687_16650691	0.102169	SOX2.p2	AK312418|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr10_-_93992982_93993017	0.101865	SOX2.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr2_-_38683572_38683581	0.101824	SOX2.p2	BC008217|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr5_-_146813343_146813573	0.101621	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr5_+_180258682_180258879	0.10117	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg18_v1_chr17_+_11864841_11864972	0.100952	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chrX_-_116991728_116991787	0.100931	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr20_-_5048443_5048668	0.100829	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen	CR617056|PCNA|5111|proliferating cell nuclear antigen	CR619580|PCNA|5111|proliferating cell nuclear antigen
hg18_v1_chr17_-_4216563_4216751	0.100555	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR623407|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr7_+_143378393_143378427	0.100474	SOX2.p2	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5
hg18_v1_chr1_-_37792414_37792541	0.100212	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg18_v1_chr9_-_85773899_85773933	0.100109	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr9_+_133259330_133259444	0.0998789	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr14_-_23846904_23846989	0.0994947	SOX2.p2	CR611009|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr14_+_19513442_19513517	0.0994664	SOX2.p2	BC140726|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15	NM_001005486|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15
hg18_v1_chr6_+_28200365_28200391	0.099414	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg18_v1_chr17_+_28279040_28279228	0.0993848	SOX2.p2	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr19_-_45016587_45016689	0.0993457	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg18_v1_chr11_+_17289030_17289089	0.0991105	SOX2.p2	
hg18_v1_chr1_+_175406685_175406718	0.0991005	SOX2.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg18_v1_chr5_-_14924555_14925155	0.098994	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr14_+_19761708_19761708	0.0989753	SOX2.p2	NM_001004480|OR11H6|122748|olfactory receptor, family 11, subfamily H, member 6
hg18_v1_chr12_+_52132154_52132169	0.0988243	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr17_-_36533903_36533944	0.0987844	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg18_v1_chr5_+_140481583_140481605	0.0986571	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr5_-_146441184_146441246	0.0982783	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr9_+_138341752_138341823	0.0980453	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg18_v1_chr11_+_112337491_112337543	0.0979813	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1	EU832805|NCAM1|4684|neural cell adhesion molecule 1	GQ129418|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr4_+_15292363_15292486	0.0979582	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr4_-_118226119_118226183	0.0979036	SOX2.p2	CR596564|TRAM1L1|133022|translocation associated membrane protein 1-like 1	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1	BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1	NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1
hg18_v1_chr9_+_71009746_71009897	0.097776	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr22_+_29696662_29696813	0.097745	SOX2.p2	
hg18_v1_chr4_-_24195274_24195275	0.0976618	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr20_+_17628592_17628604	0.0976447	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr14_-_102045849_102045888	0.0974626	SOX2.p2	CR595580|ANKRD9|122416|ankyrin repeat domain 9	BX161460|ANKRD9|122416|ankyrin repeat domain 9	NM_152326|ANKRD9|122416|ankyrin repeat domain 9	CR621329|ANKRD9|122416|ankyrin repeat domain 9
hg18_v1_chr4_+_86918870_86918874	0.0973029	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr3_+_115495522_115495565	0.0971665	SOX2.p2	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains
hg18_v1_chrX_-_99778340_99778503	0.0970652	SOX2.p2	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr4_+_15292500_15292601	0.0970222	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr1_+_165075304_165075329	0.0969559	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chrX_+_21868635_21868859	0.0968024	SOX2.p2	CR591649|SMS|6611|spermine synthase	NM_004595|SMS|6611|spermine synthase	CR591187|SMS|6611|spermine synthase	CR617235|SMS|6611|spermine synthase	CR617125|SMS|6611|spermine synthase	CR619263|SMS|6611|spermine synthase	CR624838|SMS|6611|spermine synthase	CR608120|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	CR594549|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	CR598032|SMS|6611|spermine synthase	CR620002|SMS|6611|spermine synthase	CR607592|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	CR591729|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg18_v1_chr7_+_116238309_116238359	0.0964736	SOX2.p2	DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr1_-_156816312_156816312	0.096427	SOX2.p2	NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1
hg18_v1_chr2_+_148319033_148319191	0.0963794	SOX2.p2	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr5_+_137231443_137231447	0.0962833	SOX2.p2	NM_001135940|MYOT|9499|myotilin	NM_006790|MYOT|9499|myotilin	AK300088|MYOT|9499|myotilin
hg18_v1_chr7_+_73506333_73506410	0.0962535	SOX2.p2	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr12_-_368517_368686	0.096209	SOX2.p2	AK225060|KDM5A|5927|lysine (K)-specific demethylase 5A	BC110916|KDM5A|5927|lysine (K)-specific demethylase 5A	S66431|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307580|KDM5A|5927|lysine (K)-specific demethylase 5A	AK307689|KDM5A|5927|lysine (K)-specific demethylase 5A
hg18_v1_chr3_+_171112053_171112175	0.0961954	SOX2.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chr10_+_73393998_73394128	0.0961407	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg18_v1_chr1_-_155834357_155834493	0.0960691	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr1_+_24158887_24158897	0.0960065	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr20_-_61933012_61933070	0.0959135	SOX2.p2	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46	BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46
hg18_v1_chr1_+_26973804_26973947	0.0957811	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr10_+_18589589_18589703	0.0956631	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr1_+_246703249_246703274	0.0956129	SOX2.p2	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3
hg18_v1_chr1_+_165330710_165330710	0.0953298	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg18_v1_chr7_+_142768916_142768931	0.0952991	SOX2.p2	AK316227|ZYX|7791|zyxin
hg18_v1_chr12_+_95112385_95112412	0.095107	SOX2.p2	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr10_-_50066386_50066479	0.0950794	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr19_+_48792574_48792627	0.0950298	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	CR621953|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg18_v1_chr8_-_17624304_17624363	0.0949723	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr11_+_59001421_59001478	0.0949676	SOX2.p2	BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10
hg18_v1_chr21_-_39642880_39642920	0.0948211	SOX2.p2	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr11_+_111551417_111551688	0.0948003	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr7_+_141054621_141054621	0.0947091	SOX2.p2	AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)	NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)
hg18_v1_chr15_-_32289480_32289554	0.0946251	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr10_+_70517823_70517861	0.0944885	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr21_-_32026258_32026270	0.0943281	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr4_-_76817582_76817586	0.0941488	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr16_+_8722068_8722094	0.0941303	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr3_-_115825742_115825742	0.0934814	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr5_+_88220846_88220907	0.0934605	SOX2.p2	
hg18_v1_chr17_-_60088459_60088600	0.093399	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr1_-_198644111_198644212	0.0932324	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg18_v1_chr10_+_96688399_96688466	0.0932042	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg18_v1_chr14_-_22515725_22515826	0.093174	SOX2.p2	AK025567|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr2_+_190981257_190981360	0.0931402	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr7_+_44754700_44754715	0.0928882	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr4_+_71986927_71987035	0.0928754	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr5_-_140680523_140680549	0.0926619	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr2_-_234317362_234317399	0.0926455	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr12_+_58369392_58369421	0.0923284	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg18_v1_chr8_+_73612179_73612216	0.0920522	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg18_v1_chr12_-_52868855_52869052	0.0920044	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg18_v1_chr9_+_107464558_107464598	0.0919961	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr10_-_116241572_116241622	0.0919318	SOX2.p2	
hg18_v1_chr19_-_62659665_62659707	0.0918426	SOX2.p2	AF255342|VN1R1|57191|vomeronasal 1 receptor 1	AF302903|VN1R1|57191|vomeronasal 1 receptor 1	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1	BC095508|VN1R1|57191|vomeronasal 1 receptor 1
hg18_v1_chr3_+_69895310_69895396	0.0917619	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr17_+_54652609_54652752	0.0917201	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg18_v1_chr7_+_73506172_73506316	0.0916455	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr3_+_156280338_156280398	0.0916409	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr5_+_71538456_71538583	0.0916118	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr6_-_107542328_107542328	0.0915088	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg18_v1_chr7_-_15568099_15568164	0.0914557	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg18_v1_chr9_+_114288899_114289068	0.0913299	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr17_+_23723113_23723156	0.0912305	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr9_+_83733162_83733221	0.0910626	SOX2.p2	NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4	AK125847|FAM75D4|389761|family with sequence similarity 75, member D4
hg18_v1_chr22_-_17303654_17303809	0.0910197	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr3_-_102522093_102522131	0.0909952	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr11_-_77730573_77730573	0.0909813	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr18_-_24011349_24011442	0.0909708	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chrX_+_102852492_102852492	0.0909455	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg18_v1_chr13_-_29937966_29938021	0.0909019	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr10_-_91451102_91451192	0.0907972	SOX2.p2	AK097726|NBAS|51594|neuroblastoma amplified sequence
hg18_v1_chr2_+_71059082_71059089	0.0907822	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53	CR604385|ANKRD53|79998|ankyrin repeat domain 53
hg18_v1_chr6_+_64344307_64344831	0.0906869	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr6_+_144227265_144227265	0.0905424	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr18_-_5187240_5187265	0.0904912	SOX2.p2	NM_001145194|LOC642597|642597|hypothetical protein LOC642597
hg18_v1_chr7_+_87401368_87401670	0.0903032	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr20_+_31713750_31713802	0.0902974	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	CR617586|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg18_v1_chr1_+_198263352_198263633	0.0902936	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg18_v1_chr12_-_43731148_43731150	0.0902844	SOX2.p2	AK131230|DBX2|440097|developing brain homeobox 2	NM_001004329|DBX2|440097|developing brain homeobox 2
hg18_v1_chr19_+_4353658_4353775	0.090162	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg18_v1_chr6_+_90660906_90660908	0.0901062	SOX2.p2	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa	NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa
hg18_v1_chr20_-_42561725_42561851	0.0900719	SOX2.p2	
hg18_v1_chr2_-_156894927_156894946	0.090041	SOX2.p2	EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr1_+_179164195_179164213	0.0899134	SOX2.p2	
hg18_v1_chr14_-_59167193_59167272	0.089908	SOX2.p2	CR612754|RTN1|6252|reticulon 1	CR607343|RTN1|6252|reticulon 1	CR626841|RTN1|6252|reticulon 1	CR603795|RTN1|6252|reticulon 1	CR606583|RTN1|6252|reticulon 1	CR596361|RTN1|6252|reticulon 1	CR600625|RTN1|6252|reticulon 1	CR601949|RTN1|6252|reticulon 1	CR622105|RTN1|6252|reticulon 1	CR623614|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg18_v1_chr3_+_19164973_19165044	0.0898315	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg18_v1_chr17_+_70092651_70092651	0.0897011	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg18_v1_chr6_+_88026338_88026428	0.0895727	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chr14_-_79748273_79748277	0.0895599	SOX2.p2	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	NM_013989|DIO2|1734|deiodinase, iodothyronine, type II
hg18_v1_chr2_-_55131202_55131237	0.0894775	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr7_+_55947824_55947861	0.0894298	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr17_-_30909219_30909222	0.0894272	SOX2.p2	BC140847|SLFN14|342618|schlafen family member 14	BC157877|SLFN14|342618|schlafen family member 14	BC157879|SLFN14|342618|schlafen family member 14	NM_001129820|SLFN14|342618|schlafen family member 14
hg18_v1_chr7_+_93373755_93373755	0.0893163	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg18_v1_chr10_+_104995633_104995694	0.0889264	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg18_v1_chr17_-_2943039_2943039	0.0888885	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg18_v1_chrX_+_149902415_149902515	0.0888788	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr1_-_202432165_202432250	0.0887761	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr2_+_27652892_27652896	0.0887388	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr1_+_15883425_15883637	0.0885702	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr13_-_29938029_29938081	0.0885273	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr10_-_104943000_104943074	0.0885061	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr20_-_43732291_43732322	0.0884762	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg18_v1_chr4_-_100461530_100461594	0.0884726	SOX2.p2	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg18_v1_chr7_-_122126422_122126445	0.0884647	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg18_v1_chr1_-_198645788_198645846	0.0883961	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr1_+_168767864_168767990	0.0883741	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr7_-_130891861_130891945	0.0883563	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr1_-_42549347_42549350	0.0883046	SOX2.p2	
hg18_v1_chr2_-_192420168_192420265	0.0882665	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr17_+_63338500_63338579	0.0880396	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr6_-_2696152_2696198	0.0877983	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg18_v1_chr2_+_181553783_181553926	0.0877599	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr1_+_211190476_211190605	0.0877567	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr10_-_92671005_92671011	0.0876529	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr14_-_105657378_105657714	0.0875473	SOX2.p2	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg18_v1_chr3_-_48344834_48344834	0.0874279	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr12_-_47250069_47250095	0.0874241	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg18_v1_chr2_-_207739815_207739925	0.0872517	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr19_-_16998449_16998632	0.087174	SOX2.p2	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg18_v1_chr14_-_30565275_30565368	0.087036	SOX2.p2	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg18_v1_chr4_-_74307637_74307650	0.0870297	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr2_+_181553613_181553650	0.0869311	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr5_-_83052606_83052775	0.0869265	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr5_+_34723420_34723420	0.0869041	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg18_v1_chr3_-_47798341_47798346	0.0868681	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr2_-_50428395_50428457	0.0867026	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr20_+_10363949_10364004	0.0866299	SOX2.p2	BC020787|C20orf94|128710|chromosome 20 open reading frame 94	BC026094|C20orf94|128710|chromosome 20 open reading frame 94	NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94
hg18_v1_chr5_+_132021763_132021816	0.0865985	SOX2.p2	BC096138|IL13|3596|interleukin 13	BC096139|IL13|3596|interleukin 13	BC096140|IL13|3596|interleukin 13	BC096141|IL13|3596|interleukin 13	NM_002188|IL13|3596|interleukin 13	X69079|IL13|3596|interleukin 13	L06801|IL13|3596|interleukin 13	AF043334|IL13|3596|interleukin 13
hg18_v1_chr8_+_98725505_98725602	0.0865665	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr16_+_65701284_65701426	0.0864984	SOX2.p2	AF176088|C16orf70|80262|chromosome 16 open reading frame 70	BC004556|C16orf70|80262|chromosome 16 open reading frame 70	NM_025187|C16orf70|80262|chromosome 16 open reading frame 70
hg18_v1_chr22_+_42137955_42137967	0.0864982	SOX2.p2	AK290541|MPPED1|758|metallophosphoesterase domain containing 1	AK297276|MPPED1|758|metallophosphoesterase domain containing 1	AK299516|MPPED1|758|metallophosphoesterase domain containing 1	AK299531|MPPED1|758|metallophosphoesterase domain containing 1	NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chr9_-_124329392_124329392	0.0863587	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg18_v1_chr1_-_27871306_27871346	0.0861645	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chr10_-_76538859_76538981	0.0860257	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg18_v1_chr5_-_137116746_137116859	0.0859405	SOX2.p2	CR625349|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	CR622742|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg18_v1_chr1_+_240078655_240078762	0.0858586	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr10_+_13243553_13243595	0.085841	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr19_-_2668272_2668427	0.0857157	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg18_v1_chr8_+_38704860_38704860	0.0856103	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr14_+_71468902_71468911	0.0854585	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr8_-_101227203_101227274	0.0854553	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg18_v1_chr6_-_11490487_11490566	0.0854298	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr17_-_23903772_23903786	0.0850786	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	CR613554|UNC119|9094|unc-119 homolog (C. elegans)	CR600663|UNC119|9094|unc-119 homolog (C. elegans)
hg18_v1_chr1_+_66570683_66570684	0.0849643	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr6_-_155818728_155818728	0.0849204	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg18_v1_chr12_-_8706637_8706699	0.0848824	SOX2.p2	U37283|MFAP5|8076|microfibrillar associated protein 5	NM_003480|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr3_+_75796170_75796176	0.0848759	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg18_v1_chr14_+_28311740_28311753	0.0848209	SOX2.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg18_v1_chr4_-_24195276_24195298	0.084754	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr21_+_17807167_17807318	0.0847328	SOX2.p2	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg18_v1_chr5_-_147996769_147996816	0.0847304	SOX2.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg18_v1_chr16_-_83703496_83703614	0.0847195	SOX2.p2	BC093665|FAM92B|339145|family with sequence similarity 92, member B	BC111944|FAM92B|339145|family with sequence similarity 92, member B	AK126284|FAM92B|339145|family with sequence similarity 92, member B	NM_198491|FAM92B|339145|family with sequence similarity 92, member B
hg18_v1_chr4_+_86968069_86968088	0.0846382	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr3_+_134239906_134239942	0.0845351	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg18_v1_chr2_-_27399405_27399488	0.084524	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg18_v1_chr7_+_123083096_123083251	0.0844704	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chr4_-_14612766_14612849	0.0844628	SOX2.p2	
hg18_v1_chrX_-_15593074_15593074	0.0842794	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg18_v1_chr5_+_69356827_69357015	0.0842771	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr1_-_12830728_12830899	0.0842153	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr5_+_125995304_125995312	0.0839642	SOX2.p2	BC130495|C5orf48|389320|chromosome 5 open reading frame 48	BC130497|C5orf48|389320|chromosome 5 open reading frame 48	AK131015|C5orf48|389320|chromosome 5 open reading frame 48	NM_207408|C5orf48|389320|chromosome 5 open reading frame 48
hg18_v1_chr9_+_136358145_136358298	0.0837207	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr10_+_18988282_18988572	0.0836102	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg18_v1_chrX_-_84250629_84250629	0.0834851	SOX2.p2	NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1
hg18_v1_chr5_+_140703784_140703786	0.0832855	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr6_-_166960690_166960726	0.0832581	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr16_+_68238460_68238571	0.0832004	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr17_+_71586857_71586943	0.0831872	SOX2.p2	AK122638|ZACN|353174|zinc activated ligand-gated ion channel	NM_180990|ZACN|353174|zinc activated ligand-gated ion channel	AF512521|ZACN|353174|zinc activated ligand-gated ion channel	BC110596|ZACN|353174|zinc activated ligand-gated ion channel	BC110597|ZACN|353174|zinc activated ligand-gated ion channel	AB223030|ZACN|353174|zinc activated ligand-gated ion channel
hg18_v1_chr6_-_79732391_79732552	0.0831791	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr16_-_31068882_31068915	0.0831538	SOX2.p2	BC137396|PRSS36|146547|protease, serine, 36	BC144615|PRSS36|146547|protease, serine, 36	AJ627034|PRSS36|146547|protease, serine, 36	AK075142|PRSS36|146547|protease, serine, 36	AK301409|PRSS36|146547|protease, serine, 36	AK290310|PRSS36|146547|protease, serine, 36	NM_173502|PRSS36|146547|protease, serine, 36
hg18_v1_chr1_-_26105477_26105579	0.0829979	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr11_-_113082233_113082304	0.0829031	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg18_v1_chr3_-_47798423_47798599	0.0828905	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chrX_+_41191630_41191656	0.0828814	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg18_v1_chr4_-_158111916_158111940	0.0827531	SOX2.p2	BC136662|PDGFC|56034|platelet derived growth factor C	BC144348|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr9_-_23816062_23816062	0.0826876	SOX2.p2	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr2_+_14690260_14690285	0.0826872	SOX2.p2	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg18_v1_chr9_-_79835970_79836038	0.0826868	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg18_v1_chr4_+_100651183_100651222	0.0826593	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr4_-_72868598_72868805	0.0825967	SOX2.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr15_-_63199228_63199345	0.0825731	SOX2.p2	BT007395|PDCD7|10081|programmed cell death 7	BC016992|PDCD7|10081|programmed cell death 7
hg18_v1_chr10_-_725522_725861	0.0824259	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg18_v1_chr2_-_210743622_210743708	0.0823891	SOX2.p2	AK124963|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr3_+_49210864_49210864	0.0822215	SOX2.p2	BC036202|CCDC36|339834|coiled-coil domain containing 36	NM_178173|CCDC36|339834|coiled-coil domain containing 36
hg18_v1_chr15_+_21361546_21361546	0.0820825	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr9_+_83748234_83748293	0.0820486	SOX2.p2	NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3
hg18_v1_chr6_+_72949092_72949175	0.0819188	SOX2.p2	AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr6_+_72983183_72983183	0.0819039	SOX2.p2	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr7_+_77005287_77005321	0.0817675	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr14_-_94053933_94053933	0.0817284	SOX2.p2	BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
hg18_v1_chr9_+_126158935_126159046	0.0816034	SOX2.p2	
hg18_v1_chrX_-_19598912_19599042	0.081438	SOX2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr2_+_11600287_11600301	0.081121	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chrX_+_106030049_106030049	0.0810959	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg18_v1_chr3_-_194118627_194118643	0.0809931	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg18_v1_chr6_-_76022565_76022647	0.0808448	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg18_v1_chr11_+_58888460_58888507	0.0808376	SOX2.p2	BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1	NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1
hg18_v1_chr11_-_4555625_4555626	0.0805765	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr9_-_126945536_126945689	0.0804398	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr20_+_21231921_21232030	0.0804049	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg18_v1_chr17_-_40380553_40380624	0.0803149	SOX2.p2	NM_001080443|KIF18B|146909|kinesin family member 18B
hg18_v1_chr7_+_27190688_27190810	0.0802322	SOX2.p2	
hg18_v1_chr15_-_56093477_56093526	0.0799625	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg18_v1_chr21_-_31012965_31012965	0.0799182	SOX2.p2	AB180042|KRTAP21-3|100288323|keratin associated protein 21-3	NM_001164435|KRTAP21-3|100288323|keratin associated protein 21-3
hg18_v1_chr2_+_45022540_45022561	0.0798389	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg18_v1_chr11_+_66952462_66952607	0.079778	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593942|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR602192|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604258|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR605830|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR618047|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622954|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR599694|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622329|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593441|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604667|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR612509|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR597985|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR613481|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg18_v1_chr13_-_45577144_45577211	0.0796026	SOX2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	CR626525|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg18_v1_chr20_-_41788975_41789055	0.0795786	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr12_+_120944174_120944378	0.0794514	SOX2.p2	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A	NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A	NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A	AK316486|BCL7A|605|B-cell CLL/lymphoma 7A	BC113627|BCL7A|605|B-cell CLL/lymphoma 7A	BC094723|BCL7A|605|B-cell CLL/lymphoma 7A
hg18_v1_chr13_-_98708549_98708682	0.0793444	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr5_+_15553736_15553760	0.0793274	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr2_+_211129567_211129702	0.0793169	SOX2.p2	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr20_+_6696744_6696744	0.0791653	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg18_v1_chr9_-_96442377_96442390	0.0788619	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr16_+_6009095_6009357	0.0788359	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr1_+_146824811_146824892	0.0786324	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg18_v1_chr5_+_55098469_55098495	0.0785897	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr7_-_44834702_44834741	0.0785829	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chr10_+_49562866_49562926	0.0785737	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr2_-_86276102_86276231	0.0785689	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr1_+_22252385_22252400	0.0784786	SOX2.p2	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)
hg18_v1_chr8_-_110689396_110689408	0.0780611	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr7_+_73341640_73341807	0.0779567	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr15_-_71448194_71448326	0.0779043	SOX2.p2	AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg18_v1_chr3_+_9451506_9451527	0.0778596	SOX2.p2	
hg18_v1_chr1_-_67292286_67292443	0.077772	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr1_-_7923464_7923473	0.0777117	SOX2.p2	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr17_-_53420473_53420593	0.0775809	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr12_+_48047428_48047895	0.0775665	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr7_+_6596183_6596468	0.0775426	SOX2.p2	BC001076|C7orf26|79034|chromosome 7 open reading frame 26	BC005121|C7orf26|79034|chromosome 7 open reading frame 26	AK056149|C7orf26|79034|chromosome 7 open reading frame 26	NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	CR620057|C7orf26|79034|chromosome 7 open reading frame 26
hg18_v1_chrX_+_103243762_103243918	0.077361	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg18_v1_chrX_+_110226030_110226084	0.0773257	SOX2.p2	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3
hg18_v1_chr7_+_111633878_111633938	0.0773024	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg18_v1_chr10_+_94584449_94584449	0.0772951	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr19_-_6718417_6718598	0.0770906	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg18_v1_chrX_+_105823723_105823740	0.0770382	SOX2.p2	BC036901|RNF128|79589|ring finger protein 128	NM_024539|RNF128|79589|ring finger protein 128	AK126553|RNF128|79589|ring finger protein 128
hg18_v1_chr20_+_60558369_60558429	0.0770131	SOX2.p2	BC110595|C20orf166|128826|chromosome 20 open reading frame 166
hg18_v1_chr1_+_78888064_78888120	0.0769199	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr6_+_29472310_29472455	0.0768869	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg18_v1_chrX_+_55263515_55263570	0.0768762	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg18_v1_chr15_+_49831030_49831200	0.0768442	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg18_v1_chr16_-_70591377_70591377	0.0767654	SOX2.p2	AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3	NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3
hg18_v1_chr1_-_53010929_53010933	0.0767477	SOX2.p2	
hg18_v1_chr14_-_105589467_105589979	0.0767433	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr1_-_156923111_156923129	0.0766701	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chr14_-_98807574_98807712	0.0765821	SOX2.p2	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg18_v1_chrX_-_131181141_131181224	0.0765117	SOX2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr5_-_111120817_111120853	0.0764573	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr3_-_158704056_158704108	0.0763502	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr3_-_117647011_117647031	0.0762428	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr11_+_65164167_65164167	0.0762335	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr4_+_41234944_41234981	0.0762213	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr1_+_243065630_243065647	0.0761076	SOX2.p2	
hg18_v1_chr19_-_50688310_50688357	0.0754878	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg18_v1_chr6_-_133008834_133008858	0.0753689	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg18_v1_chr11_-_128279670_128279809	0.075315	SOX2.p2	DQ891644|C11orf45|219833|chromosome 11 open reading frame 45	DQ894833|C11orf45|219833|chromosome 11 open reading frame 45
hg18_v1_chr1_-_54644269_54644483	0.0751203	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg18_v1_chr8_-_101384633_101384662	0.0750371	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr1_+_243065590_243065628	0.07501	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr12_-_45506001_45506046	0.0749272	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg18_v1_chr5_+_177368294_177368294	0.0748628	SOX2.p2	NM_001079527|FAM153C|653316|family with sequence similarity 153, member C
hg18_v1_chr22_-_25205376_25205550	0.0748125	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg18_v1_chr4_-_26100986_26101181	0.0747855	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg18_v1_chr3_-_122951200_122951299	0.0747332	SOX2.p2	BC065301|GOLGB1|2804|golgin B1	D25542|GOLGB1|2804|golgin B1	AB371588|GOLGB1|2804|golgin B1	AK300437|GOLGB1|2804|golgin B1	NM_004487|GOLGB1|2804|golgin B1	X75304|GOLGB1|2804|golgin B1
hg18_v1_chr6_+_111386455_111386591	0.0746262	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg18_v1_chr3_-_56673113_56673113	0.0746202	SOX2.p2	BC029354|C3orf63|23272|chromosome 3 open reading frame 63	NM_015224|C3orf63|23272|chromosome 3 open reading frame 63
hg18_v1_chr2_+_11597530_11597579	0.0745611	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr13_-_38462857_38462995	0.0744601	SOX2.p2	DQ891676|STOML3|161003|stomatin (EPB72)-like 3	EU176604|STOML3|161003|stomatin (EPB72)-like 3	AK313632|STOML3|161003|stomatin (EPB72)-like 3	BC025760|STOML3|161003|stomatin (EPB72)-like 3	AK304159|STOML3|161003|stomatin (EPB72)-like 3	NM_001144033|STOML3|161003|stomatin (EPB72)-like 3	NM_145286|STOML3|161003|stomatin (EPB72)-like 3
hg18_v1_chr1_+_24158898_24158969	0.0742902	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr11_+_125001521_125001546	0.0742461	SOX2.p2	NM_001274|CHEK1|1111|CHK1 checkpoint homolog (S. pombe)	BC017575|CHEK1|1111|CHK1 checkpoint homolog (S. pombe)
hg18_v1_chr13_-_20533703_20533729	0.074031	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr8_+_18072250_18072250	0.074009	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg18_v1_chrX_+_101356905_101356935	0.0738612	SOX2.p2	AK303069|NXF2B|728343|nuclear RNA export factor 2B	AK057385|NXF2|56001|nuclear RNA export factor 2	AK093310|NXF2|56001|nuclear RNA export factor 2	BX647232|NXF2|56001|nuclear RNA export factor 2	NM_001099686|NXF2B|728343|nuclear RNA export factor 2B	NM_017809|NXF2|56001|nuclear RNA export factor 2
hg18_v1_chr1_+_153366559_153366572	0.0738102	SOX2.p2	AK057845|EFNA1|1942|ephrin-A1
hg18_v1_chr2_+_100453375_100453375	0.0736269	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr17_+_55269974_55270203	0.0735787	SOX2.p2	
hg18_v1_chr15_-_50316996_50317000	0.0735553	SOX2.p2	AF161352|MYO5C|55930|myosin VC
hg18_v1_chr1_-_31484986_31485068	0.0735233	SOX2.p2	AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr2_+_68445936_68445987	0.0735041	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg18_v1_chr19_-_14800275_14800275	0.0733704	SOX2.p2	NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5
hg18_v1_chr7_+_37689903_37689911	0.0733675	SOX2.p2	
hg18_v1_chr2_+_113542017_113542029	0.0733591	SOX2.p2	AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)	NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)	AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)
hg18_v1_chr12_+_47162552_47162552	0.0733422	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg18_v1_chr5_+_140200995_140201090	0.0732905	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg18_v1_chr12_-_43556899_43556899	0.0731966	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr2_-_219614481_219614492	0.0731186	SOX2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg18_v1_chr9_+_5500544_5500783	0.072954	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr1_-_154318412_154318433	0.0729481	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg18_v1_chr9_-_96442351_96442367	0.0728738	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr3_-_196751293_196751512	0.0728314	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg18_v1_chr5_+_157090900_157091112	0.0728149	SOX2.p2	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	CR626757|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
hg18_v1_chr2_-_47235929_47236020	0.0728114	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr8_-_30121741_30121743	0.0725713	SOX2.p2	NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4	EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4
hg18_v1_chr19_+_53664386_53664576	0.0725156	SOX2.p2	CR591768|CYTH2|9266|cytohesin 2	CR623405|CYTH2|9266|cytohesin 2	AB209573|CYTH2|9266|cytohesin 2	CR591823|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	CR607678|CYTH2|9266|cytohesin 2	CR612861|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	CR611270|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	CR621270|CYTH2|9266|cytohesin 2	CR593517|CYTH2|9266|cytohesin 2	CR608279|CYTH2|9266|cytohesin 2	CR614084|CYTH2|9266|cytohesin 2	CR616768|CYTH2|9266|cytohesin 2	CR617009|CYTH2|9266|cytohesin 2	CR621404|CYTH2|9266|cytohesin 2	CR608702|CYTH2|9266|cytohesin 2	CR600368|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	CR596472|CYTH2|9266|cytohesin 2	CR598477|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg18_v1_chr10_-_127559841_127559873	0.0724627	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg18_v1_chr3_+_57718067_57718418	0.0724541	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr12_-_53314891_53314945	0.0724281	SOX2.p2	AF238867|LACRT|90070|lacritin	BC069317|LACRT|90070|lacritin	NM_033277|LACRT|90070|lacritin	BC062217|LACRT|90070|lacritin
hg18_v1_chr6_+_41148869_41148938	0.0723636	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr15_+_56511466_56511523	0.0722104	SOX2.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic
hg18_v1_chr11_-_95715976_95716126	0.072186	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr12_-_104002348_104002542	0.0721359	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr19_-_43995360_43995426	0.0721008	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg18_v1_chr5_-_111120929_111121032	0.0720975	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr12_-_67643286_67643287	0.0720633	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg18_v1_chr10_-_79298876_79298954	0.0719891	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg18_v1_chr14_+_80491461_80491777	0.0718727	SOX2.p2	BC024205|TSHR|7253|thyroid stimulating hormone receptor	NM_000369|TSHR|7253|thyroid stimulating hormone receptor	NM_001018036|TSHR|7253|thyroid stimulating hormone receptor	NM_001142626|TSHR|7253|thyroid stimulating hormone receptor	M31774|TSHR|7253|thyroid stimulating hormone receptor	BC108653|TSHR|7253|thyroid stimulating hormone receptor	BC009237|TSHR|7253|thyroid stimulating hormone receptor	M73747|TSHR|7253|thyroid stimulating hormone receptor	M32215|TSHR|7253|thyroid stimulating hormone receptor	BC063613|TSHR|7253|thyroid stimulating hormone receptor	AB209207|TSHR|7253|thyroid stimulating hormone receptor	BC120972|TSHR|7253|thyroid stimulating hormone receptor	BC120973|TSHR|7253|thyroid stimulating hormone receptor	BC127628|TSHR|7253|thyroid stimulating hormone receptor	BC127629|TSHR|7253|thyroid stimulating hormone receptor	BC141970|TSHR|7253|thyroid stimulating hormone receptor	S49816|TSHR|7253|thyroid stimulating hormone receptor	AY429111|TSHR|7253|thyroid stimulating hormone receptor	S45272|TSHR|7253|thyroid stimulating hormone receptor
hg18_v1_chr6_+_131613196_131613400	0.0718333	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr19_+_19164649_19164715	0.0716398	SOX2.p2	CR622780|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg18_v1_chr6_-_29635680_29635680	0.0716186	SOX2.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg18_v1_chr7_-_148212230_148212291	0.0715491	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr12_-_110410730_110410798	0.0715122	SOX2.p2	CR619107|ATXN2|6311|ataxin 2
hg18_v1_chr18_-_24010944_24011126	0.0714592	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr9_+_136912474_136912488	0.0714425	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg18_v1_chr6_+_29382381_29382445	0.0713667	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chrX_-_131989963_131989965	0.0712619	SOX2.p2	BC101189|USP26|83844|ubiquitin specific peptidase 26	BC101190|USP26|83844|ubiquitin specific peptidase 26	BC101191|USP26|83844|ubiquitin specific peptidase 26	BC101192|USP26|83844|ubiquitin specific peptidase 26	BC069073|USP26|83844|ubiquitin specific peptidase 26	AF285593|USP26|83844|ubiquitin specific peptidase 26	NM_031907|USP26|83844|ubiquitin specific peptidase 26
hg18_v1_chr6_-_30136734_30136950	0.0711525	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	CR611202|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg18_v1_chr12_+_68459015_68459087	0.0709888	SOX2.p2	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr17_+_63462276_63462328	0.0709744	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR599710|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR607334|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR605528|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr1_-_91259601_91259625	0.0706482	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr3_-_101077605_101077757	0.0706358	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr12_-_25041639_25041719	0.0705936	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr5_+_137231458_137231472	0.0705503	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg18_v1_chr1_-_198643885_198643899	0.0703918	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr13_-_29067795_29067846	0.070345	SOX2.p2	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr17_-_4216359_4216561	0.0703097	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR622319|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr6_-_28412130_28412130	0.0703058	SOX2.p2	NM_030899|ZNF323|64288|zinc finger protein 323
hg18_v1_chrX_+_106336517_106336517	0.0702628	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg18_v1_chr2_+_190723216_190723216	0.0702409	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr19_-_62759536_62759536	0.0702396	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg18_v1_chr1_+_26389638_26389705	0.0702066	SOX2.p2	BC144663|CATSPER4|378807|cation channel, sperm associated 4	BC128138|CATSPER4|378807|cation channel, sperm associated 4	BC128139|CATSPER4|378807|cation channel, sperm associated 4	NM_198137|CATSPER4|378807|cation channel, sperm associated 4
hg18_v1_chr12_-_46405477_46405621	0.0701388	SOX2.p2	CR606110|ENDOU|8909|endonuclease, polyU-specific	AK314688|ENDOU|8909|endonuclease, polyU-specific	BC069715|ENDOU|8909|endonuclease, polyU-specific	BC069698|ENDOU|8909|endonuclease, polyU-specific	BC074763|ENDOU|8909|endonuclease, polyU-specific	AK300169|ENDOU|8909|endonuclease, polyU-specific	AK075446|ENDOU|8909|endonuclease, polyU-specific	BC111782|ENDOU|8909|endonuclease, polyU-specific	M32402|ENDOU|8909|endonuclease, polyU-specific	M36109|ENDOU|8909|endonuclease, polyU-specific	NM_001172439|ENDOU|8909|endonuclease, polyU-specific	NM_001172440|ENDOU|8909|endonuclease, polyU-specific	NM_006025|ENDOU|8909|endonuclease, polyU-specific
hg18_v1_chr6_-_136652587_136652620	0.0700957	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg18_v1_chr12_-_8656705_8656722	0.0700941	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr12_-_78831821_78831821	0.0700615	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr8_+_28407613_28407756	0.0699668	SOX2.p2	AK291480|FZD3|7976|frizzled homolog 3 (Drosophila)	AB039723|FZD3|7976|frizzled homolog 3 (Drosophila)	NM_017412|FZD3|7976|frizzled homolog 3 (Drosophila)
hg18_v1_chr11_-_5819702_5819702	0.0698683	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr1_-_174442736_174442840	0.0698449	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr5_+_139856688_139856810	0.0698098	SOX2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr12_-_52939584_52939599	0.0697727	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chr4_+_35959638_35959645	0.0697644	SOX2.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg18_v1_chr3_+_99555387_99555387	0.0695585	SOX2.p2	NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4
hg18_v1_chr2_-_210888010_210888158	0.0695455	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr12_+_12761085_12761702	0.0694926	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg18_v1_chr18_+_54682261_54682397	0.0694094	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr2_-_21106291_21106305	0.0693945	SOX2.p2	M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr1_-_44255583_44255598	0.0693725	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr6_+_72982865_72982865	0.0693282	SOX2.p2	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr10_-_124595680_124595680	0.0693176	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg18_v1_chr5_-_141981083_141981090	0.0692959	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr9_+_15412875_15412949	0.069195	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	CR624760|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr1_+_36121403_36121609	0.0691841	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr20_+_60918836_60918861	0.0689981	SOX2.p2	BC011705|COL9A3|1299|collagen, type IX, alpha 3	NM_001853|COL9A3|1299|collagen, type IX, alpha 3	DQ892946|COL9A3|1299|collagen, type IX, alpha 3	DQ896194|COL9A3|1299|collagen, type IX, alpha 3	L41162|COL9A3|1299|collagen, type IX, alpha 3
hg18_v1_chr5_+_15553768_15553785	0.0686981	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr22_+_30125508_30125576	0.0686508	SOX2.p2	CR608940|DRG1|4733|developmentally regulated GTP binding protein 1	NM_004147|DRG1|4733|developmentally regulated GTP binding protein 1
hg18_v1_chr12_+_52132151_52132153	0.0686394	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr2_+_231629869_231629980	0.0683991	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr4_-_84150997_84151040	0.0683947	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr12_+_4700012_4700046	0.0683559	SOX2.p2	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)	BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg18_v1_chr2_+_61243132_61243132	0.0683328	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr1_+_167342149_167342306	0.0681989	SOX2.p2	CR596103|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr1_+_57093030_57093138	0.0681986	SOX2.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide
hg18_v1_chr16_+_65701428_65701579	0.0681509	SOX2.p2	
hg18_v1_chr1_-_222688337_222688430	0.0681149	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg18_v1_chr15_-_86600658_86600664	0.0681081	SOX2.p2	U05012|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3	NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3
hg18_v1_chr14_+_59782222_59782227	0.0681037	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr2_-_73860609_73860793	0.0680175	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg18_v1_chr13_-_23369124_23369193	0.0680098	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr2_-_175578156_175578415	0.0679946	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1
hg18_v1_chr15_-_99609197_99609321	0.0679289	SOX2.p2	AB071402|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr2_-_192419896_192420071	0.067927	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chr12_-_16650697_16650731	0.0679184	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	CR598247|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr7_+_55400890_55401255	0.067887	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr1_-_222688623_222688623	0.067854	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg18_v1_chr9_+_122923864_122923914	0.0677757	SOX2.p2	AK090600|CEP110|11064|centrosomal protein 110kDa	BC002932|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr5_-_39430180_39430277	0.0677579	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr15_-_63185631_63185749	0.0677463	SOX2.p2	BC127916|LOC390595|390595|ubiquitin-associated protein 1-like	NM_001163692|LOC390595|390595|ubiquitin-associated protein 1-like
hg18_v1_chr21_-_18113514_18113589	0.0677151	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg18_v1_chr1_+_156716290_156716291	0.0676544	SOX2.p2	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2
hg18_v1_chr14_+_95915774_95915774	0.0674802	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr10_-_50402148_50402364	0.0672993	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr11_-_47467094_47467152	0.0672207	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr10_-_60792225_60792357	0.0671874	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg18_v1_chr14_-_59167067_59167127	0.0670814	SOX2.p2	CR599775|RTN1|6252|reticulon 1	CR609190|RTN1|6252|reticulon 1	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	CR591857|RTN1|6252|reticulon 1	CR590533|RTN1|6252|reticulon 1	CR591277|RTN1|6252|reticulon 1	CR595047|RTN1|6252|reticulon 1	CR620778|RTN1|6252|reticulon 1	CR622144|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1	CR591505|RTN1|6252|reticulon 1	CR597727|RTN1|6252|reticulon 1	CR598114|RTN1|6252|reticulon 1	CR598721|RTN1|6252|reticulon 1	CR606033|RTN1|6252|reticulon 1	CR609607|RTN1|6252|reticulon 1	CR616369|RTN1|6252|reticulon 1	CR616883|RTN1|6252|reticulon 1	CR618902|RTN1|6252|reticulon 1	CR596045|RTN1|6252|reticulon 1	CR614370|RTN1|6252|reticulon 1	CR616915|RTN1|6252|reticulon 1	CR590119|RTN1|6252|reticulon 1	CR602238|RTN1|6252|reticulon 1	CR602429|RTN1|6252|reticulon 1	CR619313|RTN1|6252|reticulon 1
hg18_v1_chr9_-_37455429_37455453	0.0670561	SOX2.p2	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr2_+_231629852_231629868	0.0670524	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr4_+_53938586_53938656	0.06704	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr12_-_8706533_8706594	0.0668657	SOX2.p2	AK315807|MFAP5|8076|microfibrillar associated protein 5	BC005901|MFAP5|8076|microfibrillar associated protein 5	AK290585|MFAP5|8076|microfibrillar associated protein 5	CR605401|MFAP5|8076|microfibrillar associated protein 5	CR609578|MFAP5|8076|microfibrillar associated protein 5	CR603417|MFAP5|8076|microfibrillar associated protein 5	AK299475|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr7_-_148356697_148356714	0.066759	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr15_+_40427592_40427592	0.0667447	SOX2.p2	NM_212465|CAPN3|825|calpain 3, (p94)
hg18_v1_chr15_+_57286313_57286376	0.0666482	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr1_+_182287388_182287578	0.0666438	SOX2.p2	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR612120|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR606046|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR620942|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
hg18_v1_chr6_+_142510094_142510104	0.0666189	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr20_+_42399039_42399039	0.0664682	SOX2.p2	NM_178491|R3HDML|140902|R3H domain containing-like
hg18_v1_chr3_-_115826481_115826488	0.0664547	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr6_+_139136349_139136621	0.0664347	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	CR598704|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	CR626300|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A	CR612663|CCDC28A|25901|coiled-coil domain containing 28A	CR626831|CCDC28A|25901|coiled-coil domain containing 28A
hg18_v1_chr19_-_11166186_11166265	0.0664269	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg18_v1_chrX_-_138114846_138114881	0.0663446	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr3_-_110155237_110155366	0.0663391	SOX2.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr3_-_47798279_47798307	0.0663283	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr19_-_47638890_47639039	0.0661292	SOX2.p2	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17	BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17	NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17	AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17
hg18_v1_chr18_+_27281729_27281755	0.0660116	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chr21_-_29179482_29179586	0.0659849	SOX2.p2	CR612892|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	CR620576|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg18_v1_chr3_+_35696119_35696282	0.0659176	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr6_-_153000226_153000226	0.065896	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr8_-_105548323_105548460	0.0657881	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg18_v1_chr21_-_38792173_38792297	0.0657351	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr22_-_48607199_48607341	0.0657214	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg18_v1_chr5_+_175725050_175725140	0.0656931	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg18_v1_chr22_+_19239221_19239393	0.0656241	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr19_-_22171592_22171592	0.0654307	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg18_v1_chr7_-_50103335_50103405	0.0653822	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg18_v1_chr2_-_172458970_172459089	0.0652269	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg18_v1_chr20_-_39199936_39200109	0.0649496	SOX2.p2	
hg18_v1_chr1_-_188713324_188713393	0.0648994	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr19_-_61431470_61431491	0.0648948	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg18_v1_chr12_-_9976173_9976246	0.0648804	SOX2.p2	EU095393|CLEC2A|387836|C-type lectin domain family 2, member A	EU095394|CLEC2A|387836|C-type lectin domain family 2, member A	AY359126|CLEC2A|387836|C-type lectin domain family 2, member A	EF127467|CLEC2A|387836|C-type lectin domain family 2, member A	NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A
hg18_v1_chr8_-_81949570_81949570	0.0648008	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr19_+_60580015_60580015	0.0647414	SOX2.p2	AF442729|TMEM190|147744|transmembrane protein 190	BC128189|TMEM190|147744|transmembrane protein 190	BC128190|TMEM190|147744|transmembrane protein 190	NM_139172|TMEM190|147744|transmembrane protein 190
hg18_v1_chr7_-_148212312_148212316	0.0647108	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr15_+_76517623_76517734	0.064601	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	CR593632|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr11_-_6633427_6633651	0.064573	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr12_-_9651748_9651778	0.0645574	SOX2.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr13_+_33290254_33290315	0.0645539	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr11_-_111539881_111540056	0.0645508	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg18_v1_chr17_-_16816113_16816145	0.06446	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr3_-_14963943_14963978	0.0643328	SOX2.p2	
hg18_v1_chr11_-_128567302_128567302	0.0641941	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr14_-_68689284_68689573	0.0641828	SOX2.p2	BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5	BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5	AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr4_+_74499651_74499678	0.064176	SOX2.p2	CR608483|ALB|213|albumin
hg18_v1_chr22_+_29420792_29420898	0.0641164	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg18_v1_chr15_-_74941339_74941339	0.0641155	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr16_-_56886380_56886451	0.0640789	SOX2.p2	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr3_-_47798381_47798382	0.0639731	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chrX_+_48127911_48127911	0.0639018	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg18_v1_chr1_-_52293634_52293634	0.0638697	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chrX_+_37750778_37750810	0.0638168	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr2_-_179367925_179367967	0.0633782	SOX2.p2	X98114|TTN|7273|titin	X98115|TTN|7273|titin
hg18_v1_chr10_+_115514567_115514567	0.0633749	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr1_+_32889335_32889545	0.0633735	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr11_+_120478584_120478584	0.0633595	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chrX_-_110400406_110400433	0.0633299	SOX2.p2	AJ000388|CAPN6|827|calpain 6	NM_014289|CAPN6|827|calpain 6
hg18_v1_chr11_-_88864061_88864380	0.0633239	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg18_v1_chr15_+_63609791_63609893	0.0632306	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr6_-_33879734_33879770	0.063215	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr8_+_118032370_118032398	0.0631582	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr9_-_14076901_14077003	0.0630023	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr12_-_30721410_30721444	0.062853	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr18_+_31074985_31075104	0.0627575	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr3_-_47798372_47798376	0.0626943	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr5_+_86599902_86599920	0.0626433	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr19_-_1518875_1519056	0.0625771	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg18_v1_chrX_-_128804972_128805241	0.062509	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr7_+_136849104_136849182	0.0624871	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr16_-_15095590_15095668	0.0624645	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg18_v1_chr5_+_57823017_57823086	0.0624371	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr8_-_93176618_93176665	0.0623929	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr19_+_10652025_10652071	0.0623702	SOX2.p2	
hg18_v1_chr2_+_231629806_231629836	0.0622841	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr3_+_134239860_134239894	0.0622819	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg18_v1_chr9_-_137938778_137939187	0.0622684	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg18_v1_chr11_-_51269023_51269023	0.0621321	SOX2.p2	BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5	NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5
hg18_v1_chr19_+_1199548_1199600	0.0621156	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg18_v1_chr6_+_43319199_43319214	0.0620785	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg18_v1_chr4_+_88562726_88563080	0.0620302	SOX2.p2	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR619203|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR626425|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR597296|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR620878|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR604538|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg18_v1_chr4_-_191185390_191185405	0.0619839	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001005217|FRG2|448831|FSHD region gene 2
hg18_v1_chr10_-_90702490_90702559	0.0619312	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR619420|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR597033|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR621459|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr14_+_74299748_74299822	0.0618094	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg18_v1_chr1_+_40486159_40486226	0.0617581	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	CR613757|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg18_v1_chr21_-_33935883_33936029	0.0615981	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr15_-_62782399_62782413	0.0615254	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr11_-_111287657_111287749	0.0615243	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg18_v1_chr15_+_83228895_83228935	0.0615036	SOX2.p2	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
hg18_v1_chrX_-_130250715_130250715	0.0614531	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr16_+_56230707_56230930	0.0614244	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr1_+_184532027_184532033	0.0614089	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr3_-_107070400_107070595	0.0613095	SOX2.p2	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg18_v1_chr12_-_69289889_69289890	0.0612731	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr7_+_56086933_56086955	0.0612034	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr7_+_134114957_134114968	0.0610283	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg18_v1_chr19_+_54884252_54884373	0.0610176	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr22_-_30071761_30071970	0.0609895	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr16_-_88613287_88613514	0.060978	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr6_-_88911708_88911802	0.0609315	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg18_v1_chr10_+_90511142_90511142	0.0609299	SOX2.p2	EF426483|LIPN|643418|lipase, family member N	NM_001102469|LIPN|643418|lipase, family member N
hg18_v1_chr11_+_89032112_89032112	0.0608583	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg18_v1_chr4_+_54660954_54661004	0.0608515	SOX2.p2	AB028838|GSX2|170825|GS homeobox 2	EU596451|GSX2|170825|GS homeobox 2	NM_133267|GSX2|170825|GS homeobox 2
hg18_v1_chr6_+_135544170_135544207	0.0607916	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr5_+_92944680_92944798	0.0607841	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr12_+_8557402_8557595	0.0607289	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg18_v1_chr11_+_61032847_61032847	0.060717	SOX2.p2	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B
hg18_v1_chrX_+_109548940_109548940	0.0607065	SOX2.p2	AB037739|RGAG1|57529|retrotransposon gag domain containing 1	AY121804|RGAG1|57529|retrotransposon gag domain containing 1	NM_020769|RGAG1|57529|retrotransposon gag domain containing 1
hg18_v1_chr15_-_26240844_26240903	0.0607019	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2
hg18_v1_chr4_-_140280031_140280055	0.0606947	SOX2.p2	AF256222|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)
hg18_v1_chrX_+_79562601_79562635	0.0606598	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg18_v1_chr15_+_61122957_61123066	0.060658	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg18_v1_chr5_-_9683462_9683462	0.0605405	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg18_v1_chr15_+_21361901_21362021	0.0605342	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr13_-_59485299_59485343	0.060411	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg18_v1_chr20_-_33658823_33658850	0.0604096	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr7_+_116907252_116907297	0.0603767	SOX2.p2	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg18_v1_chr2_+_128644510_128644524	0.0601715	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg18_v1_chr2_+_84597087_84597089	0.0601136	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg18_v1_chr15_+_67094087_67094124	0.0600083	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg18_v1_chr19_+_55985483_55985483	0.0599409	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg18_v1_chr5_+_155686333_155686344	0.059921	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr12_+_123339662_123339662	0.0598217	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg18_v1_chr15_-_62782470_62782502	0.0596431	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr16_+_55523526_55523759	0.0596089	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr6_-_48186868_48186901	0.059607	SOX2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg18_v1_chr8_+_1940282_1940348	0.059602	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chr5_+_86599350_86599533	0.0594451	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr7_+_5598979_5599093	0.0594036	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chrX_+_111005934_111006083	0.0594035	SOX2.p2	NM_001195576|LOC100329135|100329135|hypothetical LOC100329135	NM_001195578|LOC100329135|100329135|hypothetical LOC100329135
hg18_v1_chr4_-_145281237_145281353	0.0593066	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	CR619929|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg18_v1_chr11_-_66431910_66432003	0.0592765	SOX2.p2	U30891|PC|5091|pyruvate carboxylase	NM_022172|PC|5091|pyruvate carboxylase	S72370|PC|5091|pyruvate carboxylase	U30890|PC|5091|pyruvate carboxylase
hg18_v1_chr1_+_144004589_144004727	0.0592107	SOX2.p2	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8	AY894565|NBPF10|100132406|neuroblastoma breakpoint family, member 10	AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8	NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10
hg18_v1_chr4_+_187227302_187227344	0.0591958	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg18_v1_chr14_-_106084519_106084523	0.0591937	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr11_+_62813947_62814005	0.0591825	SOX2.p2	AK298430|SLC22A10|387775|solute carrier family 22, member 10	AB075876|SLC22A10|387775|solute carrier family 22, member 10	NM_001039752|SLC22A10|387775|solute carrier family 22, member 10
hg18_v1_chr6_-_32742265_32742571	0.0591267	SOX2.p2	L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1
hg18_v1_chr1_-_184696839_184696861	0.0590932	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr8_-_38444982_38445229	0.0589546	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr21_+_30895276_30895310	0.0589528	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr13_+_97593711_97593728	0.0588501	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr2_+_219141761_219141921	0.0587479	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg18_v1_chr6_+_135544138_135544145	0.0587085	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr12_-_94469357_94469393	0.058659	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg18_v1_chrX_-_135790509_135790529	0.058657	SOX2.p2	CR597391|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr16_-_74147608_74147726	0.0585778	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	CR620108|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg18_v1_chr12_+_105500814_105500829	0.0585774	SOX2.p2	AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg18_v1_chr5_+_31229549_31229589	0.0585718	SOX2.p2	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr2_+_32356475_32356482	0.0585633	SOX2.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr20_+_34428857_34428857	0.0584225	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg18_v1_chr16_-_76026431_76026511	0.0583815	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chr7_-_116854765_116854812	0.0583308	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr16_+_67724039_67724069	0.0583253	SOX2.p2	AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr7_-_143230096_143230300	0.0582696	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr5_+_172415891_172416089	0.0582582	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chr9_+_114671635_114671738	0.0582536	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg18_v1_chr4_-_83771386_83771404	0.0582389	SOX2.p2	CR621269|SCD5|79966|stearoyl-CoA desaturase 5
hg18_v1_chr2_+_231629839_231629851	0.0582079	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr4_-_77547481_77547481	0.0582062	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg18_v1_chr13_-_35842289_35842316	0.0581994	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr1_-_45729382_45729458	0.0581871	SOX2.p2	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg18_v1_chr10_+_86121526_86121671	0.0581607	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr21_+_46094301_46094331	0.0578775	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chrX_-_110400321_110400399	0.0577785	SOX2.p2	AF029232|CAPN6|827|calpain 6	AK312701|CAPN6|827|calpain 6
hg18_v1_chr11_+_18390421_18390506	0.0577733	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg18_v1_chr22_+_30125581_30125669	0.0577598	SOX2.p2	AK315659|DRG1|4733|developmentally regulated GTP binding protein 1	CR618006|DRG1|4733|developmentally regulated GTP binding protein 1	BC019285|DRG1|4733|developmentally regulated GTP binding protein 1	AJ005940|DRG1|4733|developmentally regulated GTP binding protein 1	BC020803|DRG1|4733|developmentally regulated GTP binding protein 1	CR610738|DRG1|4733|developmentally regulated GTP binding protein 1	CR617097|DRG1|4733|developmentally regulated GTP binding protein 1	AF078103|DRG1|4733|developmentally regulated GTP binding protein 1	AK098576|DRG1|4733|developmentally regulated GTP binding protein 1	CR590091|DRG1|4733|developmentally regulated GTP binding protein 1	CR591838|DRG1|4733|developmentally regulated GTP binding protein 1	CR598092|DRG1|4733|developmentally regulated GTP binding protein 1	CR456488|DRG1|4733|developmentally regulated GTP binding protein 1	CR608295|DRG1|4733|developmentally regulated GTP binding protein 1	CR625851|DRG1|4733|developmentally regulated GTP binding protein 1	DQ890690|DRG1|4733|developmentally regulated GTP binding protein 1	DQ893872|DRG1|4733|developmentally regulated GTP binding protein 1	CU013048|DRG1|4733|developmentally regulated GTP binding protein 1	CU013336|DRG1|4733|developmentally regulated GTP binding protein 1	BT007237|DRG1|4733|developmentally regulated GTP binding protein 1	CR542059|DRG1|4733|developmentally regulated GTP binding protein 1
hg18_v1_chr6_+_148705646_148705720	0.057758	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr12_-_10846435_10846492	0.0576543	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr2_+_218972721_218972847	0.0575358	SOX2.p2	AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chr3_+_184453907_184454037	0.0575343	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr11_+_93394025_93394025	0.0574956	SOX2.p2	NM_001098672|HEPHL1|341208|hephaestin-like 1
hg18_v1_chr4_-_75938710_75938905	0.0574842	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg18_v1_chr1_-_244647333_244647336	0.0573816	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr2_+_68548173_68548364	0.0573667	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg18_v1_chr16_+_52081836_52081927	0.0573477	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr3_+_46258875_46258966	0.0573428	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg18_v1_chr14_+_95899602_95899660	0.0573301	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr16_+_24174374_24174376	0.0573297	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg18_v1_chr19_-_14121728_14121872	0.0573201	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg18_v1_chrX_+_96025562_96025691	0.0572602	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg18_v1_chr22_-_41672990_41672990	0.0572517	SOX2.p2	BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2
hg18_v1_chr16_+_15644624_15644624	0.0572465	SOX2.p2	BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)
hg18_v1_chr11_+_8016755_8016755	0.0571861	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr7_-_92300573_92300833	0.0571284	SOX2.p2	X66365|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr11_-_85103438_85103438	0.0569855	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr16_-_49742008_49742008	0.0567511	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg18_v1_chr14_-_37795001_37795066	0.0567059	SOX2.p2	CR594082|CLEC14A|161198|C-type lectin domain family 14, member A	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr14_-_104515738_104515768	0.0566224	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg18_v1_chr15_-_43457916_43458146	0.0565417	SOX2.p2	S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr17_-_30414789_30414871	0.0564886	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr15_-_84139182_84139216	0.0564809	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr17_+_26183074_26183148	0.0564139	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg18_v1_chr19_+_10625987_10626105	0.0561693	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr5_-_24535386_24535386	0.0561614	SOX2.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chr8_+_75899326_75899326	0.0561573	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr16_-_3008162_3008188	0.0561513	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	CR614114|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg18_v1_chr7_-_102070473_102070551	0.0560238	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like	CR625464|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2
hg18_v1_chr11_+_112337411_112337422	0.0560151	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr2_+_119416214_119416380	0.0559768	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	CR603381|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	CR623903|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure	CR590986|MARCO|8685|macrophage receptor with collagenous structure	CR595006|MARCO|8685|macrophage receptor with collagenous structure	CR614449|MARCO|8685|macrophage receptor with collagenous structure
hg18_v1_chr1_-_183392442_183392739	0.0558891	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chrX_-_15782842_15782858	0.0558688	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr4_+_77575276_77575276	0.0558614	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr11_-_5494391_5494531	0.0558611	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chr3_+_135996990_135996992	0.0557595	SOX2.p2	BC111744|EPHB1|2047|EPH receptor B1
hg18_v1_chr1_-_199657468_199657496	0.0557361	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr21_-_15358996_15359180	0.0556817	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr1_+_26609819_26609857	0.0556398	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr9_+_102275455_102275646	0.0554785	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr7_-_21951946_21952068	0.0554134	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr14_-_70345485_70345640	0.0553861	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg18_v1_chr11_+_118497484_118497545	0.0553848	SOX2.p2	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	CR599076|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg18_v1_chr16_-_11274952_11274952	0.0553682	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg18_v1_chrX_+_72140076_72140206	0.0553542	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg18_v1_chr9_+_116943917_116943917	0.0553093	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg18_v1_chr2_+_234490781_234490788	0.0552995	SOX2.p2	AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8
hg18_v1_chr9_-_32540818_32540908	0.0552514	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr8_+_61753912_61754132	0.0551602	SOX2.p2	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7	BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7	BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7	BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7	BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7	CR602498|CHD7|55636|chromodomain helicase DNA binding protein 7
hg18_v1_chr3_+_190990142_190990283	0.0551554	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg18_v1_chrX_+_48253007_48253152	0.0550093	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chrX_+_56606686_56606866	0.0549338	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg18_v1_chr10_-_21854616_21854616	0.0549136	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg18_v1_chr12_+_368774_368821	0.0549055	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr5_+_133735004_133735187	0.0549037	SOX2.p2	CR604876|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR616089|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR625304|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)
hg18_v1_chr16_+_87741416_87741478	0.0548996	SOX2.p2	
hg18_v1_chr1_-_172258129_172258147	0.0548811	SOX2.p2	
hg18_v1_chr2_+_160180092_160180108	0.0547904	SOX2.p2	CR604974|LOC643072|643072|hypothetical LOC643072
hg18_v1_chr5_-_149772528_149772551	0.0547756	SOX2.p2	
hg18_v1_chr14_+_71065794_71065794	0.0547393	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr10_+_60606514_60606619	0.0547338	SOX2.p2	BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR611792|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr5_+_121493113_121493176	0.0547056	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chr11_-_101906640_101906699	0.0546481	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg18_v1_chr1_-_149245503_149246008	0.0545358	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	CR594376|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg18_v1_chr3_-_10124763_10124914	0.0544998	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg18_v1_chr1_-_93172119_93172242	0.0544839	SOX2.p2	
hg18_v1_chr9_+_102380156_102380264	0.0544586	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg18_v1_chr9_-_88159076_88159142	0.0543488	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR616935|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg18_v1_chr1_-_33585848_33585919	0.0543459	SOX2.p2	
hg18_v1_chr1_-_33587998_33588083	0.0543027	SOX2.p2	AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)
hg18_v1_chr12_+_77963563_77963602	0.0541886	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr15_+_73278285_73278314	0.0541879	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg18_v1_chr12_+_22090485_22090506	0.0541742	SOX2.p2	CR625607|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR622845|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR614682|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg18_v1_chr3_-_170346760_170346786	0.0541639	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr7_+_120752656_120752656	0.0541577	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg18_v1_chr1_+_109221271_109221349	0.0541567	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr12_-_90097384_90097489	0.0540136	SOX2.p2	CR602747|DCN|1634|decorin	AK291309|DCN|1634|decorin	CR601529|DCN|1634|decorin	CR611956|DCN|1634|decorin	CR607208|DCN|1634|decorin	CR626398|DCN|1634|decorin	CR613049|DCN|1634|decorin	BX571756|DCN|1634|decorin	CR601956|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg18_v1_chrX_-_151911260_151911416	0.0540116	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg18_v1_chr21_+_36364091_36364156	0.0539715	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	CR626808|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1	CR618962|CBR1|873|carbonyl reductase 1
hg18_v1_chrX_-_135790595_135790608	0.0539373	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr1_-_239865724_239865854	0.0537958	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chr14_-_91483757_91483798	0.0535561	SOX2.p2	CR615971|FBLN5|10516|fibulin 5	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg18_v1_chr17_-_5344898_5345093	0.0535405	SOX2.p2	CR622361|LOC728392|728392|hypothetical protein LOC728392	AF217966|LOC728392|728392|hypothetical protein LOC728392	CR604079|LOC728392|728392|hypothetical protein LOC728392	CR619296|LOC728392|728392|hypothetical protein LOC728392	CR623524|LOC728392|728392|hypothetical protein LOC728392	CR608370|LOC728392|728392|hypothetical protein LOC728392	CR620539|LOC728392|728392|hypothetical protein LOC728392	CR612487|LOC728392|728392|hypothetical protein LOC728392	CR612489|LOC728392|728392|hypothetical protein LOC728392	AF131825|LOC728392|728392|hypothetical protein LOC728392	CR620726|LOC728392|728392|hypothetical protein LOC728392	NM_001162371|LOC728392|728392|hypothetical protein LOC728392	CR618493|LOC728392|728392|hypothetical protein LOC728392
hg18_v1_chr21_+_26029542_26029597	0.0535298	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr3_+_112743615_112743697	0.0535059	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg18_v1_chr21_+_26029602_26029672	0.0534839	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr9_-_138778780_138778785	0.0534618	SOX2.p2	BC093893|LCN15|389812|lipocalin 15	BC093895|LCN15|389812|lipocalin 15	AY358618|LCN15|389812|lipocalin 15	NM_203347|LCN15|389812|lipocalin 15
hg18_v1_chr4_-_84150885_84150986	0.0534551	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chrX_+_144136798_144136798	0.0534346	SOX2.p2	DQ336118|SPANXN1|494118|SPANX family, member N1	DQ336119|SPANXN1|494118|SPANX family, member N1	DQ336120|SPANXN1|494118|SPANX family, member N1	DQ336121|SPANXN1|494118|SPANX family, member N1	NM_001009614|SPANXN1|494118|SPANX family, member N1
hg18_v1_chr14_-_52689782_52689819	0.0533451	SOX2.p2	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr12_-_12310969_12311250	0.0533281	SOX2.p2	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr17_+_50699965_50700006	0.0532626	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg18_v1_chr2_+_79201118_79201139	0.053234	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr1_+_243065537_243065589	0.0532034	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr1_+_93317374_93317469	0.0531536	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr20_-_1113116_1113116	0.0531403	SOX2.p2	AK002052|C20orf46|55321|chromosome 20 open reading frame 46	NM_018354|C20orf46|55321|chromosome 20 open reading frame 46
hg18_v1_chr8_-_29262240_29262240	0.0531207	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg18_v1_chr11_+_60885983_60886316	0.0531074	SOX2.p2	NM_016464|TMEM138|51524|transmembrane protein 138	CR596588|TMEM138|51524|transmembrane protein 138
hg18_v1_chr2_+_104837004_104837008	0.0530851	SOX2.p2	
hg18_v1_chr3_+_197951203_197951242	0.0530354	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr2_+_206255376_206255471	0.0529643	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg18_v1_chr11_+_5925152_5925152	0.0529194	SOX2.p2	NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3
hg18_v1_chr8_+_9949207_9949371	0.0528825	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg18_v1_chr13_+_112349358_112349358	0.0528279	SOX2.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr8_-_78075834_78075834	0.0527389	SOX2.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr5_+_6767717_6767784	0.0527021	SOX2.p2	NM_001171805|PAPD7|11044|PAP associated domain containing 7	NM_006999|PAPD7|11044|PAP associated domain containing 7	AF089896|PAPD7|11044|PAP associated domain containing 7	BC084567|PAPD7|11044|PAP associated domain containing 7
hg18_v1_chr1_+_50342168_50342168	0.052683	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr12_+_74014685_74014774	0.0526171	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chr1_+_42701460_42701611	0.0525899	SOX2.p2	AL832217|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr18_+_54681657_54682014	0.0525397	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr3_-_47798390_47798412	0.0524284	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr16_-_4263001_4263026	0.0524165	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr4_+_151218862_151219088	0.0524014	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg18_v1_chr12_-_100979869_100979891	0.0523749	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53	CR609797|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr7_-_50596238_50596268	0.0522724	SOX2.p2	AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	CR623782|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg18_v1_chr1_-_100416358_100416388	0.0522239	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg18_v1_chr3_+_66527586_66527713	0.0521819	SOX2.p2	
hg18_v1_chr12_+_107974722_107974893	0.0521569	SOX2.p2	NM_032663|USP30|84749|ubiquitin specific peptidase 30	BC004868|USP30|84749|ubiquitin specific peptidase 30	AJ586136|USP30|84749|ubiquitin specific peptidase 30	DQ893401|USP30|84749|ubiquitin specific peptidase 30	DQ896783|USP30|84749|ubiquitin specific peptidase 30
hg18_v1_chr12_-_49763566_49763715	0.0521128	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr2_-_106868891_106868943	0.0521059	SOX2.p2	
hg18_v1_chr5_-_149772563_149772724	0.0517205	SOX2.p2	CR590167|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr2_+_69995807_69995966	0.0516957	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr1_-_181654124_181654359	0.0515625	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg18_v1_chr9_-_21218132_21218313	0.051554	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg18_v1_chr3_+_52803823_52803855	0.0513902	SOX2.p2	NM_002217|ITIH3|3699|inter-alpha (globulin) inhibitor H3	X67055|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK222757|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK298450|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107604|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107605|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107814|ITIH3|3699|inter-alpha (globulin) inhibitor H3
hg18_v1_chr7_+_56086871_56086929	0.0513885	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr14_-_52689680_52689756	0.0513833	SOX2.p2	DQ315474|DDHD1|80821|DDHD domain containing 1	GU376468|DDHD1|80821|DDHD domain containing 1	BC030703|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr11_+_125730760_125730771	0.0513579	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr3_+_184898234_184898398	0.0510916	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chr8_-_7710547_7710647	0.0510906	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr7_+_73136085_73136098	0.051002	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr9_-_88159143_88159244	0.0509729	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg18_v1_chr17_+_63252087_63252242	0.0507448	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr5_-_141318810_141318810	0.0506418	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr19_-_14490227_14490233	0.0506125	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr9_-_35818728_35818743	0.0505164	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg18_v1_chr17_+_23723180_23723191	0.0503837	SOX2.p2	AY444166|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr2_-_198007967_198007982	0.0503509	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr21_-_31995972_31996007	0.0503246	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr5_-_111121150_111121364	0.0502979	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr1_-_95165037_95165086	0.0502817	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg18_v1_chr15_-_81667169_81667668	0.0502629	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr5_-_83716346_83716494	0.0501594	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr8_+_26296439_26296563	0.0501017	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr10_+_127398215_127398389	0.0500962	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg18_v1_chr12_+_92487728_92487728	0.050072	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg18_v1_chr1_-_21373816_21373837	0.0499913	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr11_-_83661878_83661970	0.0499763	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr7_-_27125738_27125738	0.0498663	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg18_v1_chr21_+_37496616_37496639	0.0496941	SOX2.p2	CR593065|TTC3|7267|tetratricopeptide repeat domain 3
hg18_v1_chr10_-_97311084_97311174	0.0496124	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr10_+_104525877_104526013	0.0495758	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg18_v1_chr11_-_103539895_103540113	0.0495743	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg18_v1_chr1_+_109221124_109221144	0.0495262	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr3_+_161877640_161877658	0.0494886	SOX2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg18_v1_chr2_+_170298487_170298676	0.0494695	SOX2.p2	
hg18_v1_chr1_-_196776697_196776697	0.0494083	SOX2.p2	NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3	NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg18_v1_chr2_-_197165495_197165579	0.0493983	SOX2.p2	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr3_+_120347686_120347687	0.0492659	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg18_v1_chr20_-_43440290_43440446	0.0492389	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg18_v1_chr4_+_156899575_156899733	0.0491973	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr5_+_86599800_86599845	0.0491838	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr20_-_45360903_45361050	0.049146	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chrX_-_100490329_100490405	0.0491189	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg18_v1_chr7_-_37454933_37455054	0.0491133	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr21_-_18697829_18697843	0.0491055	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr19_+_19164732_19164772	0.0490842	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	CR617522|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg18_v1_chr5_+_27508139_27508182	0.0490798	SOX2.p2	BC039509|LOC643401|643401|hypothetical protein LOC643401	BC046201|LOC643401|643401|hypothetical protein LOC643401
hg18_v1_chr19_-_57181862_57181914	0.0490662	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg18_v1_chr9_-_106420305_106420305	0.0489584	SOX2.p2	NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9
hg18_v1_chr5_+_140481763_140481764	0.0489409	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr8_+_21980315_21980332	0.0488843	SOX2.p2	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)
hg18_v1_chr16_-_4927057_4927153	0.0488743	SOX2.p2	AF013717|PPL|5493|periplakin	BC114620|PPL|5493|periplakin	AF001691|PPL|5493|periplakin	NM_002705|PPL|5493|periplakin
hg18_v1_chr11_+_48466844_48466920	0.0488605	SOX2.p2	BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47
hg18_v1_chr4_-_120462705_120462763	0.048823	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr21_-_26029830_26029854	0.0487989	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chr10_-_69661860_69661860	0.0487508	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr1_-_117011824_117011989	0.0487284	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg18_v1_chr14_-_44673408_44673417	0.0487075	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa	CR613618|FKBP3|2287|FK506 binding protein 3, 25kDa	CR599673|FKBP3|2287|FK506 binding protein 3, 25kDa	CR623899|FKBP3|2287|FK506 binding protein 3, 25kDa	CR610696|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr16_-_46976649_46976858	0.048695	SOX2.p2	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr20_+_31106797_31106890	0.0486719	SOX2.p2	BC113398|C20orf185|359710|chromosome 20 open reading frame 185	BC113400|C20orf185|359710|chromosome 20 open reading frame 185	AF549189|C20orf185|359710|chromosome 20 open reading frame 185	NM_182658|C20orf185|359710|chromosome 20 open reading frame 185
hg18_v1_chr3_+_197951121_197951124	0.0486345	SOX2.p2	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr20_-_17459973_17460012	0.0486109	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg18_v1_chr7_-_148212310_148212311	0.0484717	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr2_-_10870254_10870305	0.0482982	SOX2.p2	DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6	DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6	CR618905|PDIA6|10130|protein disulfide isomerase family A, member 6	AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chr21_+_33936494_33936956	0.0482576	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chrX_-_85189194_85189221	0.0481972	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr22_-_30885200_30885308	0.0481066	SOX2.p2	BC139845|C22orf42|150297|chromosome 22 open reading frame 42	CR456485|C22orf42|150297|chromosome 22 open reading frame 42	NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42	BC040263|C22orf42|150297|chromosome 22 open reading frame 42
hg18_v1_chr11_-_5523328_5523354	0.0480156	SOX2.p2	NM_001005289|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1	BC136998|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1
hg18_v1_chr9_-_73715666_73715825	0.0479492	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr10_+_22674379_22674546	0.0479358	SOX2.p2	CR591720|SPAG6|9576|sperm associated antigen 6	AK302194|SPAG6|9576|sperm associated antigen 6	NM_012443|SPAG6|9576|sperm associated antigen 6	NM_172242|SPAG6|9576|sperm associated antigen 6	AF079363|SPAG6|9576|sperm associated antigen 6	AK310247|SPAG6|9576|sperm associated antigen 6	AK289903|SPAG6|9576|sperm associated antigen 6	AL080136|SPAG6|9576|sperm associated antigen 6	BC030585|SPAG6|9576|sperm associated antigen 6	AM392674|SPAG6|9576|sperm associated antigen 6	AM392698|SPAG6|9576|sperm associated antigen 6	DQ890916|SPAG6|9576|sperm associated antigen 6	DQ894067|SPAG6|9576|sperm associated antigen 6	CR533552|SPAG6|9576|sperm associated antigen 6
hg18_v1_chr9_-_34610460_34610482	0.0479329	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr19_-_54093749_54093807	0.0479091	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg18_v1_chr5_-_168204430_168204444	0.0478991	SOX2.p2	
hg18_v1_chr10_-_91092410_91092461	0.0476362	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg18_v1_chr8_+_7789608_7789621	0.0475911	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg18_v1_chr5_+_150137700_150137700	0.0475834	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg18_v1_chr16_+_66464519_66464536	0.0475028	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr8_+_79590890_79590890	0.0473933	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr2_+_27293846_27293921	0.047344	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr3_+_98641143_98641179	0.0473109	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg18_v1_chr10_+_98730977_98731137	0.0473074	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg18_v1_chr8_-_22606653_22606806	0.0472337	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg18_v1_chr13_-_34948758_34948835	0.0470682	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chr17_+_52688842_52689102	0.04704	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr19_+_46286207_46286216	0.0470326	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg18_v1_chr11_+_71221893_71221893	0.0470174	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr1_+_28134090_28134207	0.0469151	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	CR613549|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg18_v1_chr12_-_68369322_68369323	0.0468893	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr1_+_12958129_12958135	0.0468601	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22
hg18_v1_chr18_-_35634247_35634285	0.0467656	SOX2.p2	AK090603|LOC647946|647946|hypothetical LOC647946
hg18_v1_chr5_-_121842680_121842684	0.0466947	SOX2.p2	
hg18_v1_chr4_+_37131946_37131994	0.0466734	SOX2.p2	NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19	BC037906|C4orf19|55286|chromosome 4 open reading frame 19
hg18_v1_chr20_+_60311334_60311417	0.046643	SOX2.p2	CR594238|ADRM1|11047|adhesion regulating molecule 1	AK307459|ADRM1|11047|adhesion regulating molecule 1
hg18_v1_chr20_-_10602429_10602710	0.0465922	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr4_+_72078255_72078416	0.0465723	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr3_+_162697289_162697289	0.0465526	SOX2.p2	NM_001080440|OTOL1|131149|otolin 1 homolog (zebrafish)
hg18_v1_chr6_+_83130220_83130284	0.0465032	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg18_v1_chr11_-_55684368_55684368	0.0464551	SOX2.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chr17_+_20970828_20970909	0.0464001	SOX2.p2	AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B
hg18_v1_chr22_-_31732648_31732805	0.0463967	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg18_v1_chr19_-_14490235_14490346	0.0463779	SOX2.p2	CR601481|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr18_-_42751305_42751518	0.0463325	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2
hg18_v1_chr12_-_11030777_11030777	0.0463291	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr14_+_51525942_51526067	0.0462885	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr14_-_44673418_44673495	0.0462164	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr11_-_66201894_66201973	0.0462005	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B	CR591230|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr7_-_148356664_148356688	0.046076	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr16_+_3473476_3473618	0.0460247	SOX2.p2	AK095819|NAT15|79903|N-acetyltransferase 15 (GCN5-related, putative)
hg18_v1_chr6_+_88021644_88021755	0.0460146	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr1_-_45760115_45760195	0.0460076	SOX2.p2	CR620467|PRDX1|5052|peroxiredoxin 1	CR595111|PRDX1|5052|peroxiredoxin 1	CR592546|PRDX1|5052|peroxiredoxin 1	CR612185|PRDX1|5052|peroxiredoxin 1	X67951|PRDX1|5052|peroxiredoxin 1	L19184|PRDX1|5052|peroxiredoxin 1	AK311898|PRDX1|5052|peroxiredoxin 1	BC007063|PRDX1|5052|peroxiredoxin 1	AK131049|PRDX1|5052|peroxiredoxin 1	BC021683|PRDX1|5052|peroxiredoxin 1	NM_002574|PRDX1|5052|peroxiredoxin 1	NM_181696|PRDX1|5052|peroxiredoxin 1	NM_181697|PRDX1|5052|peroxiredoxin 1
hg18_v1_chr6_+_37895244_37895293	0.0459929	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr5_+_156628929_156628939	0.0459915	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr12_-_6586736_6586789	0.0459025	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr5_-_180175146_180175151	0.0458155	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chrX_-_114158388_114158472	0.0456626	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR594473|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR623092|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg18_v1_chr11_-_8147111_8147168	0.0456444	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chr5_-_149772469_149772526	0.0455563	SOX2.p2	CR615386|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621994|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR595353|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR625117|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR622356|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR608107|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621213|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR601246|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR619151|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr15_+_72861470_72861488	0.0455419	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase	CR620625|CSK|1445|c-src tyrosine kinase
hg18_v1_chr16_+_67723988_67724019	0.0453538	SOX2.p2	NM_032830|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr18_+_70317548_70317603	0.0453031	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr2_+_88148413_88148516	0.0451012	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr16_-_67723993_67723993	0.0450706	SOX2.p2	NM_001039690|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr10_-_98021144_98021322	0.0450409	SOX2.p2	AM180327|BLNK|29760|B-cell linker	AM180328|BLNK|29760|B-cell linker	AM180329|BLNK|29760|B-cell linker	AM180330|BLNK|29760|B-cell linker	AM180331|BLNK|29760|B-cell linker	AM180332|BLNK|29760|B-cell linker	AM180333|BLNK|29760|B-cell linker	AM180334|BLNK|29760|B-cell linker	AM180335|BLNK|29760|B-cell linker	AM180336|BLNK|29760|B-cell linker	AM180337|BLNK|29760|B-cell linker	AM180338|BLNK|29760|B-cell linker	AM180339|BLNK|29760|B-cell linker	AM180340|BLNK|29760|B-cell linker	AM180341|BLNK|29760|B-cell linker	AM180342|BLNK|29760|B-cell linker	AM180343|BLNK|29760|B-cell linker	AM180344|BLNK|29760|B-cell linker	AM180345|BLNK|29760|B-cell linker	AM180346|BLNK|29760|B-cell linker	BC018906|BLNK|29760|B-cell linker	CR598772|BLNK|29760|B-cell linker	BC110298|BLNK|29760|B-cell linker	AK027779|BLNK|29760|B-cell linker	AF068180|BLNK|29760|B-cell linker	AF068181|BLNK|29760|B-cell linker	AK225546|BLNK|29760|B-cell linker	NM_001114094|BLNK|29760|B-cell linker	NM_013314|BLNK|29760|B-cell linker
hg18_v1_chr11_+_14883118_14883133	0.0449491	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg18_v1_chr10_+_35934343_35934343	0.0449215	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg18_v1_chr6_+_87921980_87922037	0.0448567	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg18_v1_chr12_-_107551783_107551800	0.0448449	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr19_+_53664276_53664384	0.0447839	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2	CR599552|CYTH2|9266|cytohesin 2
hg18_v1_chr8_+_11697588_11697598	0.0447595	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr8_+_133856738_133856792	0.0446908	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr15_+_83724743_83725047	0.0446751	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chr17_-_2913650_2913704	0.0445764	SOX2.p2	BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5	BC118668|OR1D4|653166|olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)	BC122528|OR1D4|653166|olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)	NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5
hg18_v1_chr11_-_114593838_114593879	0.044561	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr6_+_129245978_129246034	0.0443952	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg18_v1_chr17_-_2977594_2977708	0.0443841	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg18_v1_chr8_-_17315171_17315230	0.044344	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr5_-_111120764_111120807	0.0442854	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr16_-_67723971_67723975	0.0442831	SOX2.p2	AF525164|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK000407|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr12_-_43556424_43556513	0.0442087	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr13_-_71338144_71338376	0.0441691	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr2_-_198008011_198008049	0.0441652	SOX2.p2	BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr12_+_67919619_67919693	0.0441199	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr4_+_3341521_3341521	0.0440899	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr10_-_92670764_92670828	0.0440719	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg18_v1_chr17_-_71287417_71287456	0.0440279	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595774|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR611244|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602412|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR604778|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR606388|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595544|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603793|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR617433|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602780|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618082|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR619729|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621264|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625366|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR591387|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603175|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621009|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618076|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR624690|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595062|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR597711|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602581|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR605171|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR610507|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR614120|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR615382|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR616111|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR608885|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR622957|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR599200|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625547|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg18_v1_chr11_+_10787328_10787419	0.0440261	SOX2.p2	
hg18_v1_chr2_+_152900076_152900362	0.0439282	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg18_v1_chr4_-_151990061_151990138	0.0438459	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr14_-_49767690_49767776	0.043845	SOX2.p2	L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr1_-_200182090_200182313	0.0438409	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr19_+_60077360_60077557	0.0438063	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg18_v1_chrX_-_114999449_114999485	0.0438012	SOX2.p2	BC003645|LOC642776|642776|hypothetical LOC642776
hg18_v1_chr2_-_171631728_171631728	0.043589	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chr2_-_98714020_98714070	0.0435511	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr17_+_73721924_73722060	0.0435396	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	CR593999|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	CR602197|BIRC5|332|baculoviral IAP repeat containing 5	CR603892|BIRC5|332|baculoviral IAP repeat containing 5	CR619419|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	CR624931|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	CR605755|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	CR592187|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg18_v1_chr14_-_68424653_68424732	0.0434767	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg18_v1_chr12_+_67366989_67367072	0.0434727	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg18_v1_chr3_-_120347571_120347604	0.0434638	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg18_v1_chr5_+_140780797_140780978	0.0434357	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr7_+_73136254_73136286	0.0433003	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr4_+_71261066_71261135	0.0432652	SOX2.p2	AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A	NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg18_v1_chr12_+_6473552_6473558	0.0431402	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr2_+_143603439_143603483	0.0431099	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr10_+_102096761_102096902	0.0430638	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg18_v1_chr3_+_137224266_137224350	0.0429994	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg18_v1_chr18_+_30810889_30811025	0.0429503	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg18_v1_chr12_+_6473519_6473535	0.0429056	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr9_-_19023183_19023255	0.0428198	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg18_v1_chr18_+_53967544_53967566	0.0427354	SOX2.p2	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr3_+_130014957_130015132	0.0426851	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr3_+_188397967_188398105	0.0426506	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg18_v1_chr19_-_40411418_40411471	0.0426314	SOX2.p2	BC039080|FAM187B|148109|family with sequence similarity 187, member B	AK098526|FAM187B|148109|family with sequence similarity 187, member B	NM_152481|FAM187B|148109|family with sequence similarity 187, member B	BC117457|FAM187B|148109|family with sequence similarity 187, member B	BC117459|FAM187B|148109|family with sequence similarity 187, member B
hg18_v1_chr10_-_14412813_14412900	0.0426244	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr12_+_109956210_109956300	0.0426115	SOX2.p2	BC151245|CUX2|23316|cut-like homeobox 2	NM_015267|CUX2|23316|cut-like homeobox 2	AB006631|CUX2|23316|cut-like homeobox 2	AF271236|CUX2|23316|cut-like homeobox 2
hg18_v1_chr2_+_169021039_169021204	0.0426082	SOX2.p2	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr2_-_197883739_197883789	0.0426049	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg18_v1_chr11_-_10787157_10787248	0.0425514	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr5_+_78568094_78568227	0.0424864	SOX2.p2	
hg18_v1_chr17_-_74432800_74433047	0.0424147	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr17_+_28279283_28279349	0.0423853	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	CR593283|TMEM98|26022|transmembrane protein 98	CR597085|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	CR596889|TMEM98|26022|transmembrane protein 98	CR613257|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	CR617431|TMEM98|26022|transmembrane protein 98	CR606539|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg18_v1_chr3_-_123617571_123617644	0.0423555	SOX2.p2	BC025762|WDR5B|54554|WD repeat domain 5B	NM_019069|WDR5B|54554|WD repeat domain 5B	CR592490|WDR5B|54554|WD repeat domain 5B
hg18_v1_chr5_+_139008209_139008493	0.0423278	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr7_+_107088315_107088315	0.0422798	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg18_v1_chr1_-_167822248_167822329	0.0422545	SOX2.p2	AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)	M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)	M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)
hg18_v1_chrX_-_13866366_13866425	0.0421915	SOX2.p2	
hg18_v1_chr14_+_87541220_87541286	0.0421541	SOX2.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg18_v1_chr14_-_59167284_59167289	0.042154	SOX2.p2	AK290534|RTN1|6252|reticulon 1
hg18_v1_chr17_+_23722689_23722825	0.0421152	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr4_-_157006827_157006874	0.0420758	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr1_-_233558114_233558115	0.0420368	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr2_+_27293737_27293779	0.0420331	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr4_-_120769590_120769631	0.0420001	SOX2.p2	
hg18_v1_chr6_+_123151669_123151669	0.0419908	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr4_-_141896920_141896979	0.0418427	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg18_v1_chr5_+_138116972_138117015	0.0416652	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr6_-_49820030_49820126	0.0416116	SOX2.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chrX_+_106048245_106048245	0.0415932	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg18_v1_chr13_-_73606362_73606432	0.0415546	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg18_v1_chrX_+_1693940_1694067	0.0414566	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg18_v1_chr3_-_14963980_14964102	0.0414152	SOX2.p2	
hg18_v1_chr11_+_125730773_125730817	0.0414075	SOX2.p2	CR598875|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR616349|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR602167|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614162|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595606|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595607|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR624587|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614499|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr1_+_100088394_100088632	0.0413283	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr19_+_16105837_16105837	0.0413015	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr6_+_118976134_118976183	0.0412323	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr12_-_100979893_100979921	0.0412283	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr22_+_40724674_40724768	0.0412205	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg18_v1_chr8_+_145136571_145136631	0.0411881	SOX2.p2	AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr14_-_59167139_59167145	0.0411858	SOX2.p2	CR593929|RTN1|6252|reticulon 1	CR603070|RTN1|6252|reticulon 1
hg18_v1_chr14_-_30746577_30746796	0.0411387	SOX2.p2	
hg18_v1_chr5_-_36036883_36036886	0.0411365	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg18_v1_chr16_+_67724023_67724034	0.0411201	SOX2.p2	BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr5_+_55069601_55069665	0.0411042	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr3_-_47798347_47798362	0.0410868	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr17_+_23723220_23723252	0.0409755	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr4_-_83570318_83570437	0.0409401	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr7_+_103756339_103756570	0.0409164	SOX2.p2	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3
hg18_v1_chr5_-_96504258_96504331	0.0408775	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr18_+_61568467_61568467	0.0408435	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg18_v1_chrX_-_114374860_114374890	0.0408371	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chr18_+_40514772_40514961	0.0408016	SOX2.p2	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg18_v1_chr15_+_64781723_64781734	0.0407153	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr19_-_61680510_61680581	0.0406645	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg18_v1_chr11_-_118739838_118740067	0.0406152	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr2_+_152899837_152899996	0.0406053	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg18_v1_chr5_-_121441910_121441958	0.0405877	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr6_+_30702586_30702758	0.0405822	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	CR599754|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	CR602660|ATAT1|79969|alpha tubulin acetyltransferase 1	CR619757|ATAT1|79969|alpha tubulin acetyltransferase 1	CR594590|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	CR615059|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg18_v1_chr5_+_140757787_140757878	0.0405552	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr1_-_31251315_31251371	0.0405165	SOX2.p2	CR592163|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr6_-_50124322_50124322	0.0404268	SOX2.p2	DQ012016|DEFB112|245915|defensin, beta 112	NM_001037498|DEFB112|245915|defensin, beta 112
hg18_v1_chr9_-_113130533_113130533	0.0403539	SOX2.p2	BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2	NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2
hg18_v1_chr8_+_64243741_64243767	0.0403037	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr1_-_205186330_205186438	0.0402339	SOX2.p2	BC110494|PIGR|5284|polymeric immunoglobulin receptor	BC110495|PIGR|5284|polymeric immunoglobulin receptor	CR749533|PIGR|5284|polymeric immunoglobulin receptor	S62403|PIGR|5284|polymeric immunoglobulin receptor	AF272149|PIGR|5284|polymeric immunoglobulin receptor	X73079|PIGR|5284|polymeric immunoglobulin receptor	AK225471|PIGR|5284|polymeric immunoglobulin receptor	NM_002644|PIGR|5284|polymeric immunoglobulin receptor
hg18_v1_chr1_-_241485298_241485330	0.04017	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr8_+_31616809_31616809	0.0401296	SOX2.p2	NM_013962|NRG1|3084|neuregulin 1
hg18_v1_chr4_-_147079018_147079236	0.0401258	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr10_+_59764718_59764967	0.0401	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr1_-_206484258_206484287	0.0400808	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr1_+_203503214_203503300	0.0400767	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr1_-_20986385_20986428	0.0400075	SOX2.p2	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr10_+_129237602_129237602	0.0399832	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr11_-_85107569_85107858	0.0397796	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr6_-_30748760_30748808	0.0396053	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr1_-_163680941_163681215	0.039603	SOX2.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr9_-_88064338_88064369	0.039557	SOX2.p2	NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153	BC108665|C9orf153|389766|chromosome 9 open reading frame 153
hg18_v1_chr11_-_65382313_65382379	0.039538	SOX2.p2	CR617396|CFL1|1072|cofilin 1 (non-muscle)	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg18_v1_chr5_+_140537554_140537613	0.0395246	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg18_v1_chr1_-_203985963_203985994	0.039472	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr15_-_21483457_21483495	0.0394627	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr9_+_122890394_122890425	0.0394434	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chrX_+_69404879_69404926	0.0394039	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg18_v1_chr11_+_17714070_17714121	0.0394027	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg18_v1_chr20_-_118263_118321	0.0391106	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr2_+_61146542_61146622	0.0390244	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr3_-_152173475_152173475	0.0390204	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg18_v1_chr7_+_5598964_5598967	0.0390153	SOX2.p2	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr5_+_88221013_88221028	0.0389311	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg18_v1_chr4_-_113777569_113777599	0.0389131	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr1_-_229071957_229071957	0.0388233	SOX2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chrX_-_55225668_55225668	0.0388125	SOX2.p2	NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10
hg18_v1_chrX_-_63342209_63342394	0.0387155	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg18_v1_chr21_+_44002290_44002434	0.0386961	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg18_v1_chr13_+_97593469_97593505	0.0386584	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr1_-_20986345_20986383	0.0385992	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3	CR599334|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr2_-_39310176_39310240	0.0385372	SOX2.p2	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4	AY847283|CDKL4|344387|cyclin-dependent kinase-like 4	NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4	BC144460|CDKL4|344387|cyclin-dependent kinase-like 4
hg18_v1_chr2_+_181553333_181553608	0.0385102	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr2_-_85642061_85642144	0.0383998	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	CR607119|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr4_-_168392266_168392292	0.0383911	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr3_+_184453547_184453738	0.0383901	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr4_+_154345039_154345071	0.0382683	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr5_-_111121691_111121813	0.0382082	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr11_-_57927457_57927457	0.0382045	SOX2.p2	NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3
hg18_v1_chr11_-_118571793_118571793	0.0381962	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg18_v1_chr6_+_112481970_112482251	0.0381659	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg18_v1_chr9_+_35528890_35528938	0.0380946	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr2_-_10870306_10870437	0.0379718	SOX2.p2	CR606263|PDIA6|10130|protein disulfide isomerase family A, member 6	CR614510|PDIA6|10130|protein disulfide isomerase family A, member 6	CR624923|PDIA6|10130|protein disulfide isomerase family A, member 6	CR617062|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595714|PDIA6|10130|protein disulfide isomerase family A, member 6	CR606166|PDIA6|10130|protein disulfide isomerase family A, member 6	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602648|PDIA6|10130|protein disulfide isomerase family A, member 6	CR607388|PDIA6|10130|protein disulfide isomerase family A, member 6	CR594255|PDIA6|10130|protein disulfide isomerase family A, member 6	CR622384|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595577|PDIA6|10130|protein disulfide isomerase family A, member 6	CR593821|PDIA6|10130|protein disulfide isomerase family A, member 6	CR599723|PDIA6|10130|protein disulfide isomerase family A, member 6	CR590867|PDIA6|10130|protein disulfide isomerase family A, member 6	CR601561|PDIA6|10130|protein disulfide isomerase family A, member 6	CR620116|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602748|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595109|PDIA6|10130|protein disulfide isomerase family A, member 6	CR608933|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chrX_+_133334965_133335121	0.0379332	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr7_-_150411345_150411502	0.037919	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr7_+_2638108_2638150	0.0379022	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr16_+_66484671_66484776	0.0378845	SOX2.p2	AK309272|PSKH1|5681|protein serine kinase H1	NM_006742|PSKH1|5681|protein serine kinase H1	BC062616|PSKH1|5681|protein serine kinase H1	AJ272212|PSKH1|5681|protein serine kinase H1
hg18_v1_chr16_-_45339605_45339721	0.0378769	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg18_v1_chr6_+_14033402_14033442	0.0378492	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg18_v1_chr15_-_63069146_63069229	0.037848	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR592296|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR605959|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR593134|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR613754|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr6_+_148705421_148705491	0.0378124	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr12_-_43556338_43556406	0.0378032	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr8_-_145122884_145122946	0.0377867	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg18_v1_chr14_+_54238581_54238697	0.037736	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr15_-_84139021_84139181	0.0376891	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr20_-_10602139_10602269	0.0376809	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chr8_+_79591074_79591204	0.0375041	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr12_+_47009029_47009081	0.0373499	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg18_v1_chr2_-_70167569_70167665	0.0373295	SOX2.p2	BC040598|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr2_+_72968009_72968068	0.0371576	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg18_v1_chr19_-_60382529_60382569	0.0371137	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg18_v1_chr5_+_86599982_86600036	0.0370246	SOX2.p2	
hg18_v1_chr7_+_140420500_140420500	0.0370176	SOX2.p2	NM_001195278|LOC100131199|100131199|transmembrane protein 178-like
hg18_v1_chr12_-_107551744_107551780	0.0370033	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr8_-_38445272_38445345	0.0369542	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr5_-_121441805_121441860	0.0368982	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg18_v1_chr11_+_116608447_116608839	0.0368787	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg18_v1_chr4_+_40953698_40953761	0.0368208	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623179|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598723|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609313|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610620|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR614782|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR616949|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623929|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR591761|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR619178|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610215|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR613951|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR596405|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598599|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR600224|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR624065|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR626014|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR595667|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609753|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610993|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr18_+_66107222_66107260	0.0367515	SOX2.p2	BC020082|SOCS6|9306|suppressor of cytokine signaling 6
hg18_v1_chr1_+_31659246_31659302	0.036703	SOX2.p2	AK093784|SERINC2|347735|serine incorporator 2	AK316357|SERINC2|347735|serine incorporator 2	NM_001199039|SERINC2|347735|serine incorporator 2	NM_018565|SERINC2|347735|serine incorporator 2	AK296118|SERINC2|347735|serine incorporator 2
hg18_v1_chr1_-_199742841_199742863	0.0366989	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr14_+_51397166_51397206	0.0366821	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr19_+_45564549_45564697	0.0366669	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr12_-_56159895_56159899	0.0365496	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chrX_+_49104714_49104724	0.0365455	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894127|GAGE1|2543|G antigen 1	DQ894341|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr3_-_14964620_14964663	0.0365251	SOX2.p2	
hg18_v1_chr10_+_103995297_103995417	0.0365102	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr16_-_56038771_56038940	0.0364671	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chr3_+_2908920_2908920	0.0364583	SOX2.p2	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4
hg18_v1_chr8_-_71146022_71146028	0.0364519	SOX2.p2	BC052311|PRDM14|63978|PR domain containing 14
hg18_v1_chr20_-_13919256_13919261	0.0363851	SOX2.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg18_v1_chr6_-_108386000_108386011	0.0363604	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr11_-_16454493_16454510	0.0363434	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr12_+_54080480_54080579	0.0363273	SOX2.p2	BC136897|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	BC136899|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	NM_001005518|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65
hg18_v1_chrX_-_148604506_148604506	0.0362466	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr5_+_36642213_36642213	0.0361529	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr13_+_51334117_51334274	0.03612	SOX2.p2	AK098719|CCDC70|83446|coiled-coil domain containing 70	NM_031290|CCDC70|83446|coiled-coil domain containing 70	AK225745|CCDC70|83446|coiled-coil domain containing 70	AL136887|CCDC70|83446|coiled-coil domain containing 70	BC069691|CCDC70|83446|coiled-coil domain containing 70	BC069748|CCDC70|83446|coiled-coil domain containing 70	BC069770|CCDC70|83446|coiled-coil domain containing 70	BC069806|CCDC70|83446|coiled-coil domain containing 70
hg18_v1_chr9_+_35528628_35528628	0.0359498	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr6_-_30748597_30748759	0.0359361	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr6_+_57062937_57062943	0.0359062	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg18_v1_chr14_-_49652944_49653097	0.0358098	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	CR597030|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg18_v1_chr19_+_10932719_10932781	0.0357857	SOX2.p2	CR612486|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	CR597216|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr10_-_123677370_123677661	0.0357316	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg18_v1_chr1_-_115070413_115070531	0.0356925	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr6_+_57062918_57062926	0.0356669	SOX2.p2	AK302577|ZNF451|26036|zinc finger protein 451
hg18_v1_chr5_-_121441866_121441878	0.0354938	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg18_v1_chr2_-_208736533_208736610	0.0354421	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg18_v1_chr2_+_54638957_54639182	0.0354059	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr12_+_119418299_119418347	0.0353887	SOX2.p2	CR590506|DYNLL1|8655|dynein, light chain, LC8-type 1	CR619359|DYNLL1|8655|dynein, light chain, LC8-type 1	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	CR607733|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1	CR609172|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr6_-_32299757_32299821	0.0353758	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg18_v1_chr11_+_59027624_59027624	0.035334	SOX2.p2	NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11
hg18_v1_chr13_-_110365336_110365396	0.0353288	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10	CR604585|ANKRD10|55608|ankyrin repeat domain 10
hg18_v1_chr14_+_78815406_78815508	0.0353107	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg18_v1_chr9_-_35101592_35101619	0.0353106	SOX2.p2	CR601417|KIAA1539|80256|KIAA1539
hg18_v1_chr12_-_121551349_121551411	0.0352481	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr18_-_76106221_76106479	0.0352068	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg18_v1_chr7_+_129634935_129634953	0.0351983	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg18_v1_chr3_-_121117647_121117670	0.0351981	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr2_-_233349469_233349518	0.0350924	SOX2.p2	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg18_v1_chr6_+_39868770_39868843	0.0350753	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg18_v1_chr1_-_199742871_199743009	0.0350461	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr1_+_61642287_61642335	0.0350124	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_-_51332214_51332225	0.0350081	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg18_v1_chr8_-_27525084_27525184	0.0349404	SOX2.p2	CR591665|CLU|1191|clusterin	NM_001171138|CLU|1191|clusterin
hg18_v1_chr12_-_79855618_79855824	0.0349029	SOX2.p2	CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)	BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)	AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)	BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)	BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)	BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)	BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)	AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)	AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)	NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)
hg18_v1_chr17_+_62391216_62391487	0.0348954	SOX2.p2	AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4
hg18_v1_chr2_-_198007984_198008008	0.0348693	SOX2.p2	BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr12_-_38300109_38300109	0.0348504	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr4_-_83702123_83702154	0.0348369	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg18_v1_chr8_+_133856793_133856855	0.0347635	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr1_-_200182338_200182340	0.0347395	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr14_+_95899541_95899594	0.034685	SOX2.p2	CR608981|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr6_-_83832139_83832316	0.0345663	SOX2.p2	CR590287|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR604323|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR598717|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg18_v1_chr21_+_43903803_43903969	0.0345148	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr11_-_105398118_105398221	0.034506	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr4_-_76817587_76817620	0.0344538	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr5_+_156540425_156540565	0.0344071	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg18_v1_chrX_-_135790535_135790588	0.0343809	SOX2.p2	CR607658|RBMX|27316|RNA binding motif protein, X-linked	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	CR616933|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked	CR599705|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr16_-_67723928_67723948	0.0343077	SOX2.p2	BC018700|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr6_+_44295219_44295449	0.0343049	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr3_-_114047479_114047486	0.0343016	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr14_-_37795290_37795324	0.0342881	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr3_+_43303005_43303141	0.0342237	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr11_+_44026106_44026140	0.0341834	SOX2.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr7_+_12217343_12217558	0.0341394	SOX2.p2	NM_001134232|TMEM106B|54664|transmembrane protein 106B	NM_018374|TMEM106B|54664|transmembrane protein 106B	AK311651|TMEM106B|54664|transmembrane protein 106B	AK002135|TMEM106B|54664|transmembrane protein 106B	BC033901|TMEM106B|54664|transmembrane protein 106B	BC028108|TMEM106B|54664|transmembrane protein 106B	CR624005|TMEM106B|54664|transmembrane protein 106B	BC039741|TMEM106B|54664|transmembrane protein 106B	AK223263|TMEM106B|54664|transmembrane protein 106B
hg18_v1_chr8_-_121893449_121893453	0.034055	SOX2.p2	BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr14_+_20048451_20048470	0.0340123	SOX2.p2	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)
hg18_v1_chr19_-_50963942_50963968	0.0339477	SOX2.p2	
hg18_v1_chr4_+_17125885_17125885	0.0338365	SOX2.p2	BC127863|CLRN2|645104|clarin 2	NM_001079827|CLRN2|645104|clarin 2
hg18_v1_chr7_+_137795719_137795833	0.033779	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr3_-_47909001_47909068	0.0337733	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg18_v1_chr12_+_54721952_54721988	0.0337506	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	CR611958|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg18_v1_chr19_+_10932713_10932718	0.0337119	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr6_+_26071255_26071398	0.0336475	SOX2.p2	CR607808|TRIM38|10475|tripartite motif containing 38	CR936707|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr11_-_58099884_58099965	0.0336474	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr12_-_101396459_101396558	0.0336018	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr11_-_125730622_125730642	0.0335317	SOX2.p2	
hg18_v1_chr1_-_181654027_181654117	0.0334351	SOX2.p2	
hg18_v1_chr11_-_102219450_102219563	0.0334061	SOX2.p2	J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg18_v1_chr11_-_125730655_125730691	0.0332943	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr15_+_31390454_31390468	0.0331769	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3
hg18_v1_chr9_+_103200939_103201191	0.0331691	SOX2.p2	AK290163|ZNF189|7743|zinc finger protein 189	AK313655|ZNF189|7743|zinc finger protein 189	AK308935|ZNF189|7743|zinc finger protein 189	NM_003452|ZNF189|7743|zinc finger protein 189	NM_197977|ZNF189|7743|zinc finger protein 189	BC065718|ZNF189|7743|zinc finger protein 189	BC092425|ZNF189|7743|zinc finger protein 189	AF025770|ZNF189|7743|zinc finger protein 189	U75454|ZNF189|7743|zinc finger protein 189	U95992|ZNF189|7743|zinc finger protein 189	BC126120|ZNF189|7743|zinc finger protein 189	BC143876|ZNF189|7743|zinc finger protein 189	BC143877|ZNF189|7743|zinc finger protein 189
hg18_v1_chr19_-_51856129_51856292	0.0331686	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr14_-_74669864_74669883	0.0331567	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg18_v1_chr9_-_139564656_139564806	0.0331535	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr21_+_37713076_37713076	0.0331353	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr6_+_57062760_57062787	0.0330971	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg18_v1_chr14_+_20283938_20283967	0.0330943	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr12_-_14858358_14858382	0.0330545	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr17_+_72795567_72795581	0.0330422	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg18_v1_chr15_-_41698251_41698289	0.0330287	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	BC129932|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg18_v1_chr3_+_157874898_157874898	0.0330253	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr8_-_22070208_22070288	0.0329559	SOX2.p2	AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3	BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3	BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3	AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3	NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3
hg18_v1_chr18_-_71050268_71050319	0.0329224	SOX2.p2	BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	CR610486|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr8_-_121893468_121893907	0.0328835	SOX2.p2	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr2_-_55053398_55053426	0.0328813	SOX2.p2	
hg18_v1_chr4_-_152366970_152367109	0.0328415	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr1_+_115373937_115373937	0.0327859	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg18_v1_chr22_+_43451600_43451668	0.0327261	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	CR605746|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg18_v1_chr2_+_198089036_198089082	0.0326799	SOX2.p2	AF093825|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF151853|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK307497|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AL080070|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AB015441|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK297514|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AJ580638|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	CR457371|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr1_-_148155986_148156070	0.0326676	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg18_v1_chr16_+_24696069_24696181	0.0326302	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr12_+_120055013_120055156	0.0326171	SOX2.p2	NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7
hg18_v1_chr11_+_60448487_60448535	0.0325671	SOX2.p2	NM_017870|TMEM132A|54972|transmembrane protein 132A	NM_178031|TMEM132A|54972|transmembrane protein 132A	AK000546|TMEM132A|54972|transmembrane protein 132A	BC114569|TMEM132A|54972|transmembrane protein 132A	BC032059|TMEM132A|54972|transmembrane protein 132A
hg18_v1_chr14_+_75141557_75141557	0.0325554	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr4_+_120167264_120167303	0.0325122	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg18_v1_chr11_-_56101772_56101838	0.0325057	SOX2.p2	NM_001004741|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10	BC140733|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10
hg18_v1_chr15_+_43036194_43036206	0.0325023	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg18_v1_chrX_-_19918958_19919101	0.0324948	SOX2.p2	AY092822|LOC729609|729609|hypothetical LOC729609
hg18_v1_chr2_+_32356492_32356576	0.0323915	SOX2.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr17_+_7269658_7269683	0.0323604	SOX2.p2	BC031286|C17orf74|201243|chromosome 17 open reading frame 74	BC048010|C17orf74|201243|chromosome 17 open reading frame 74	NM_175734|C17orf74|201243|chromosome 17 open reading frame 74	BC044816|C17orf74|201243|chromosome 17 open reading frame 74
hg18_v1_chr5_+_139008139_139008197	0.0322395	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr17_-_7931745_7931745	0.0321315	SOX2.p2	AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type	NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type
hg18_v1_chr1_-_611896_611915	0.0321189	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg18_v1_chr10_-_76488277_76488346	0.0321084	SOX2.p2	AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1
hg18_v1_chr13_-_102209422_102209422	0.032055	SOX2.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chr19_-_41711009_41711087	0.032039	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	CR609031|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg18_v1_chr12_-_100979923_100980060	0.0320164	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	CR621235|CCDC53|51019|coiled-coil domain containing 53	CR623956|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr19_+_11569234_11569349	0.0320103	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg18_v1_chr2_-_106869041_106869062	0.0320017	SOX2.p2	AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg18_v1_chr15_-_54175954_54176025	0.0319995	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr11_-_49960646_49960646	0.0319836	SOX2.p2	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12
hg18_v1_chr3_-_49204294_49204294	0.0319579	SOX2.p2	NM_001080528|LOC646498|646498|hypothetical protein LOC646498
hg18_v1_chr1_+_42920946_42921397	0.0318879	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr5_+_15553539_15553549	0.0318353	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr7_+_56086960_56087060	0.0317706	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr20_+_30409649_30410014	0.0316948	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg18_v1_chr4_+_113777568_113777568	0.0316869	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr19_+_38263625_38263625	0.0316631	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chr1_-_114855200_114855266	0.0316087	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr21_-_42172476_42172659	0.031569	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg18_v1_chr2_+_28828332_28828494	0.0315149	SOX2.p2	BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chr16_+_83349816_83349878	0.0315003	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chr8_-_121892877_121893007	0.0314038	SOX2.p2	AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg18_v1_chr3_+_48388712_48388768	0.0313983	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg18_v1_chr3_-_14964403_14964530	0.0313661	SOX2.p2	
hg18_v1_chr8_-_24869945_24870049	0.0313606	SOX2.p2	AY156690|NEFL|4747|neurofilament, light polypeptide	DQ892646|NEFL|4747|neurofilament, light polypeptide	DQ895884|NEFL|4747|neurofilament, light polypeptide	AK075003|NEFL|4747|neurofilament, light polypeptide	AK127430|NEFL|4747|neurofilament, light polypeptide	AK225975|NEFL|4747|neurofilament, light polypeptide	AK299095|NEFL|4747|neurofilament, light polypeptide	AK314591|NEFL|4747|neurofilament, light polypeptide	BC039237|NEFL|4747|neurofilament, light polypeptide	BC066952|NEFL|4747|neurofilament, light polypeptide	AK057731|NEFL|4747|neurofilament, light polypeptide	NM_006158|NEFL|4747|neurofilament, light polypeptide
hg18_v1_chr10_-_30356344_30356531	0.0312855	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg18_v1_chr17_+_59875623_59875900	0.0312426	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr19_-_6453224_6453411	0.0312315	SOX2.p2	EU831818|TUBB4|10382|tubulin, beta 4	EU831895|TUBB4|10382|tubulin, beta 4	BC006570|TUBB4|10382|tubulin, beta 4	AK095202|TUBB4|10382|tubulin, beta 4	AK295917|TUBB4|10382|tubulin, beta 4	AK075307|TUBB4|10382|tubulin, beta 4	BC013683|TUBB4|10382|tubulin, beta 4	NM_006087|TUBB4|10382|tubulin, beta 4	AK293503|TUBB4|10382|tubulin, beta 4
hg18_v1_chr18_-_71050034_71050166	0.0312244	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr4_-_55686503_55686520	0.0312058	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg18_v1_chr20_+_23293020_23293020	0.0311424	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chr21_+_36458708_36458708	0.0310733	SOX2.p2	AJ237839|DOPEY2|9980|dopey family member 2	NM_005128|DOPEY2|9980|dopey family member 2
hg18_v1_chr2_-_86276015_86276101	0.0310717	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr7_+_2638156_2638303	0.0310435	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr1_+_149395728_149395781	0.0310239	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chrX_-_140614227_140614320	0.0309543	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg18_v1_chr2_-_31491102_31491128	0.0309337	SOX2.p2	NM_000379|XDH|7498|xanthine dehydrogenase
hg18_v1_chr2_+_32356460_32356473	0.030915	SOX2.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr19_+_50086299_50086349	0.0308666	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr6_+_83130673_83130719	0.0308622	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg18_v1_chr1_+_13615388_13615388	0.0308478	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr17_-_74432671_74432750	0.0308141	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr11_-_85115105_85115158	0.0308058	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr22_+_38903825_38904066	0.0307675	SOX2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr8_-_94046891_94046992	0.0307551	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg18_v1_chr4_-_44348414_44348414	0.0307106	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr8_-_71146103_71146115	0.0306412	SOX2.p2	AF319458|PRDM14|63978|PR domain containing 14	AK022595|PRDM14|63978|PR domain containing 14	NM_024504|PRDM14|63978|PR domain containing 14
hg18_v1_chrX_-_153252775_153252844	0.0306035	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg18_v1_chr1_+_28936030_28936219	0.03056	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	CR599207|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	CR593745|YTHDF2|51441|YTH domain family, member 2	CR595878|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr15_-_39623734_39623748	0.0304882	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg18_v1_chr3_+_44746101_44746127	0.0304674	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg18_v1_chr21_-_30791298_30791342	0.0304306	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg18_v1_chr8_-_38444675_38444848	0.0304245	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr14_+_89933055_89933098	0.0303896	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr3_-_153541468_153541468	0.0303855	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr20_-_29751755_29751762	0.0303545	SOX2.p2	
hg18_v1_chr2_+_203485175_203485361	0.0303347	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg18_v1_chr13_+_112681626_112681655	0.0303298	SOX2.p2	AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg18_v1_chr7_-_82630063_82630281	0.0302799	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg18_v1_chr6_+_132000134_132000217	0.0302555	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg18_v1_chr5_+_159781454_159781509	0.0302026	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr2_-_162808123_162808290	0.0301828	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chr5_+_31229609_31229659	0.0301648	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr3_+_69895651_69895651	0.0301544	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr2_+_219354948_219355323	0.0300739	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR623283|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR590744|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr5_+_36642424_36642547	0.0300676	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr4_-_168392151_168392221	0.0300169	SOX2.p2	AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr9_-_125070675_125070744	0.0299814	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr4_-_152316105_152316153	0.0299573	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr18_-_46977687_46977734	0.0298444	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr7_-_128203079_128203079	0.0298099	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg18_v1_chr12_+_68028407_68028546	0.0297744	SOX2.p2	AK311779|LYZ|4069|lysozyme	J03801|LYZ|4069|lysozyme	FJ795023|LYZ|4069|lysozyme	BC004147|LYZ|4069|lysozyme	M21119|LYZ|4069|lysozyme	CR607267|LYZ|4069|lysozyme	M19045|LYZ|4069|lysozyme	DQ892271|LYZ|4069|lysozyme	DQ895472|LYZ|4069|lysozyme	U25677|LYZ|4069|lysozyme	CR615077|LYZ|4069|lysozyme
hg18_v1_chr17_-_26672757_26672892	0.0297408	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	CR590095|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg18_v1_chr11_-_5662762_5662917	0.0297327	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr15_-_80123935_80123941	0.0296904	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr5_-_96504194_96504202	0.0296901	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chrX_+_108666891_108667130	0.0296453	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr21_+_33320080_33320162	0.0296325	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg18_v1_chr10_+_80743769_80743922	0.0296162	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr6_+_139497933_139497965	0.0296048	SOX2.p2	BC070068|HECA|51696|headcase homolog (Drosophila)	AB033492|HECA|51696|headcase homolog (Drosophila)	NM_016217|HECA|51696|headcase homolog (Drosophila)
hg18_v1_chr11_-_55438633_55438633	0.0294697	SOX2.p2	NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2
hg18_v1_chr9_-_128910132_128910214	0.0294578	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg18_v1_chr17_+_56832255_56832301	0.0294553	SOX2.p2	U28049|TBX2|6909|T-box 2
hg18_v1_chr15_-_63069280_63069318	0.029455	SOX2.p2	CR597831|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR601212|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr15_-_97607108_97607350	0.0294299	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr7_-_148212336_148212382	0.0293987	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr4_-_76817635_76817717	0.0293856	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr17_+_44429748_44429911	0.0293518	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg18_v1_chr2_+_79200995_79201094	0.0293378	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr13_+_30672122_30672298	0.029324	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr9_+_134884627_134884655	0.0292487	SOX2.p2	BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	X03689|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr14_+_89933118_89933244	0.0291839	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR592381|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR618763|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR590380|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR591035|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR604747|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR619428|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR595745|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	CR626701|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chrX_+_122923279_122923358	0.0291837	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr2_+_218790364_218790438	0.0291404	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg18_v1_chr13_+_51484517_51484561	0.0291234	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chr12_+_119418294_119418298	0.029123	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr15_+_36331411_36331963	0.0290344	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr11_+_114054409_114054507	0.0290206	SOX2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr3_-_172227461_172227461	0.029019	SOX2.p2	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2
hg18_v1_chr18_+_76006795_76006922	0.0290002	SOX2.p2	AK056304|LOC100130522|100130522|hypothetical LOC100130522
hg18_v1_chr2_+_54536780_54537452	0.0289964	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr18_-_71049977_71050001	0.0289821	SOX2.p2	
hg18_v1_chr2_-_225519974_225520022	0.0289371	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr12_-_6586811_6586824	0.0289224	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr17_+_62261696_62261699	0.0287807	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg18_v1_chr6_+_26359805_26359857	0.0287678	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg18_v1_chr17_-_74433048_74433096	0.0287131	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr2_+_37165097_37165206	0.0287087	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg18_v1_chr12_-_21980894_21980894	0.0287023	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020298|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg18_v1_chr18_+_53862744_53862821	0.0286909	SOX2.p2	AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_-_238164452_238164507	0.0286743	SOX2.p2	BC023661|RAB17|64284|RAB17, member RAS oncogene family	AK225423|RAB17|64284|RAB17, member RAS oncogene family	AK022600|RAB17|64284|RAB17, member RAS oncogene family	NM_022449|RAB17|64284|RAB17, member RAS oncogene family
hg18_v1_chr1_+_28935719_28936022	0.0286317	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr22_-_30071565_30071686	0.0285803	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr4_-_109307325_109307401	0.028502	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr12_-_97812633_97812777	0.0284648	SOX2.p2	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr11_+_4799126_4799191	0.0284446	SOX2.p2	BC136877|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2	NM_001004753|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2
hg18_v1_chr19_+_9295854_9296020	0.0284307	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript
hg18_v1_chr6_+_123359076_123359088	0.0284115	SOX2.p2	AK295158|CLVS2|134829|clavesin 2
hg18_v1_chr12_+_70366140_70366153	0.0283631	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg18_v1_chr17_+_63462347_63462394	0.0283108	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR606537|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr22_+_25155220_25155428	0.0283093	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr3_+_180805266_180805309	0.0282975	SOX2.p2	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg18_v1_chr11_+_65164963_65164995	0.0282664	SOX2.p2	
hg18_v1_chr1_+_1157485_1157595	0.0282592	SOX2.p2	NM_080605|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6	BC051719|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
hg18_v1_chr3_-_180805104_180805129	0.0282547	SOX2.p2	AY212270|MRPL47|57129|mitochondrial ribosomal protein L47	BC032522|MRPL47|57129|mitochondrial ribosomal protein L47	BC021575|MRPL47|57129|mitochondrial ribosomal protein L47	NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47	NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47
hg18_v1_chr14_-_73962557_73962557	0.0282467	SOX2.p2	NM_001105579|TMEM90A|646658|transmembrane protein 90A
hg18_v1_chr5_-_171643399_171643442	0.0282012	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr9_-_35105844_35105911	0.0281571	SOX2.p2	AK022837|KIAA1539|80256|KIAA1539	AK021622|KIAA1539|80256|KIAA1539	BC004406|KIAA1539|80256|KIAA1539	NM_025182|KIAA1539|80256|KIAA1539	AK307682|KIAA1539|80256|KIAA1539
hg18_v1_chr4_+_48180033_48180335	0.0281501	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg18_v1_chr12_-_57600564_57600574	0.0281043	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg18_v1_chr3_-_150569574_150569644	0.0280727	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr10_-_13429397_13429798	0.0280586	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr22_-_43784444_43784472	0.0279732	SOX2.p2	AK092243|PHF21B|112885|PHD finger protein 21B	NM_001135862|PHF21B|112885|PHD finger protein 21B
hg18_v1_chrX_+_71280758_71280758	0.027968	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg18_v1_chr19_-_864138_864189	0.0278779	SOX2.p2	CR608111|C19orf22|91300|chromosome 19 open reading frame 22	CR615271|C19orf22|91300|chromosome 19 open reading frame 22	CR592767|C19orf22|91300|chromosome 19 open reading frame 22	CR617180|C19orf22|91300|chromosome 19 open reading frame 22	CR617940|C19orf22|91300|chromosome 19 open reading frame 22	CR599301|C19orf22|91300|chromosome 19 open reading frame 22	CR597374|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr19_+_9334695_9334695	0.027746	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr12_+_30970882_30970973	0.027737	SOX2.p2	AK293947|TSPAN11|441631|tetraspanin 11
hg18_v1_chr11_-_2970055_2970097	0.0277331	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr1_-_226670928_226671080	0.027694	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg18_v1_chr1_+_82038669_82038669	0.0276802	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr12_+_63090008_63090082	0.0276743	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr15_-_32833980_32834073	0.0276092	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg18_v1_chr6_+_30799130_30799944	0.0276062	SOX2.p2	BC001896|TUBB|203068|tubulin, beta	CR623734|TUBB|203068|tubulin, beta	DQ457058|TUBB|203068|tubulin, beta	CR609320|TUBB|203068|tubulin, beta	BC029323|TUBB|203068|tubulin, beta	BC015889|TUBB|203068|tubulin, beta	CR603884|TUBB|203068|tubulin, beta	CR595288|TUBB|203068|tubulin, beta	CR621096|TUBB|203068|tubulin, beta	CR610916|TUBB|203068|tubulin, beta	CR598257|TUBB|203068|tubulin, beta	CR620192|TUBB|203068|tubulin, beta	CR601330|TUBB|203068|tubulin, beta	CR620319|TUBB|203068|tubulin, beta	CR620286|TUBB|203068|tubulin, beta	CR614676|TUBB|203068|tubulin, beta	CR617749|TUBB|203068|tubulin, beta	CR596743|TUBB|203068|tubulin, beta	BC001002|TUBB|203068|tubulin, beta	EF036509|TUBB|203068|tubulin, beta	CR606806|TUBB|203068|tubulin, beta	CR598437|TUBB|203068|tubulin, beta
hg18_v1_chr3_-_187138342_187138468	0.0275422	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR603112|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR590258|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR608950|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr12_-_9913724_9913724	0.0275422	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr3_-_158361175_158361242	0.027535	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg18_v1_chr9_-_21984329_21984370	0.0274505	SOX2.p2	BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chrX_+_153318662_153318794	0.0274425	SOX2.p2	AK294893|GDI1|2664|GDP dissociation inhibitor 1	AK295306|GDI1|2664|GDP dissociation inhibitor 1	AK303248|GDI1|2664|GDP dissociation inhibitor 1	AL833629|GDI1|2664|GDP dissociation inhibitor 1	AK090746|GDI1|2664|GDP dissociation inhibitor 1	BC012201|GDI1|2664|GDP dissociation inhibitor 1	X79353|GDI1|2664|GDP dissociation inhibitor 1	BC000317|GDI1|2664|GDP dissociation inhibitor 1	D45021|GDI1|2664|GDP dissociation inhibitor 1	AF400433|GDI1|2664|GDP dissociation inhibitor 1	AM392660|GDI1|2664|GDP dissociation inhibitor 1	AM393226|GDI1|2664|GDP dissociation inhibitor 1	AM393601|GDI1|2664|GDP dissociation inhibitor 1	DQ892049|GDI1|2664|GDP dissociation inhibitor 1	DQ895243|GDI1|2664|GDP dissociation inhibitor 1	DQ896843|GDI1|2664|GDP dissociation inhibitor 1	AB102647|GDI1|2664|GDP dissociation inhibitor 1	BT019884|GDI1|2664|GDP dissociation inhibitor 1	CR542258|GDI1|2664|GDP dissociation inhibitor 1	CR542276|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr17_-_24426752_24426752	0.0274285	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg18_v1_chr13_-_60887655_60887655	0.0274189	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg18_v1_chr1_-_159369081_159369101	0.0273676	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr19_+_10932583_10932709	0.0273356	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr11_+_6475065_6475106	0.0273085	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg18_v1_chrX_-_117003310_117003403	0.0273069	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chrX_-_138552517_138552665	0.0272983	SOX2.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg18_v1_chr3_+_110338250_110338256	0.0272769	SOX2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr16_-_67723511_67723562	0.0272764	SOX2.p2	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr18_-_51406841_51406859	0.0272582	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr20_-_42457717_42457759	0.0272577	SOX2.p2	
hg18_v1_chr6_+_142510108_142510123	0.02725	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr19_-_864194_864200	0.027217	SOX2.p2	CR624510|C19orf22|91300|chromosome 19 open reading frame 22	BC012775|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr11_+_65164767_65164895	0.0271648	SOX2.p2	AK310068|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr3_+_101536234_101536361	0.0270706	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg18_v1_chr17_+_56831951_56832086	0.027048	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg18_v1_chr6_-_111243100_111243122	0.0270382	SOX2.p2	BC037289|CDK19|23097|cyclin-dependent kinase 19	NM_015076|CDK19|23097|cyclin-dependent kinase 19	AK292360|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr3_+_135996734_135996949	0.0270273	SOX2.p2	NM_004441|EPHB1|2047|EPH receptor B1	AK291208|EPHB1|2047|EPH receptor B1	AK309741|EPHB1|2047|EPH receptor B1	L40636|EPHB1|2047|EPH receptor B1
hg18_v1_chr16_+_71256497_71256633	0.0268862	SOX2.p2	
hg18_v1_chr11_-_118394242_118394288	0.0268672	SOX2.p2	CR608319|RPS25|6230|ribosomal protein S25	CR620392|RPS25|6230|ribosomal protein S25	CR622778|RPS25|6230|ribosomal protein S25	BC004986|RPS25|6230|ribosomal protein S25	AK311883|RPS25|6230|ribosomal protein S25	M64716|RPS25|6230|ribosomal protein S25	D28369|RPS25|6230|ribosomal protein S25	NM_001028|RPS25|6230|ribosomal protein S25
hg18_v1_chr1_-_175400573_175400646	0.0268401	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg18_v1_chr17_-_3992939_3992989	0.0267417	SOX2.p2	
hg18_v1_chr8_+_32698892_32698977	0.0267025	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg18_v1_chr5_+_121325554_121325626	0.0266965	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg18_v1_chr19_-_60383280_60383531	0.0266443	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg18_v1_chr11_-_5279750_5279751	0.0266017	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr19_-_864201_864201	0.0265831	SOX2.p2	CR606082|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr5_+_109052945_109052982	0.0265653	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr13_+_38510440_38510631	0.0264696	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	CR613108|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3	CR601315|NHLRC3|387921|NHL repeat containing 3
hg18_v1_chr9_-_34610483_34610488	0.0264204	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr7_+_26644014_26644014	0.0263784	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg18_v1_chr7_+_107008439_107008453	0.0263771	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr16_+_2023279_2023297	0.026361	SOX2.p2	CR617760|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg18_v1_chr4_+_140806371_140806509	0.0263491	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr19_-_12641206_12641249	0.0262765	SOX2.p2	BC001192|C19orf56|51398|chromosome 19 open reading frame 56	AK311944|C19orf56|51398|chromosome 19 open reading frame 56	AF059620|C19orf56|51398|chromosome 19 open reading frame 56	BC042919|C19orf56|51398|chromosome 19 open reading frame 56	BC061912|C19orf56|51398|chromosome 19 open reading frame 56
hg18_v1_chr14_-_19572756_19572756	0.0262719	SOX2.p2	NM_001004714|OR4K13|390433|olfactory receptor, family 4, subfamily K, member 13
hg18_v1_chr8_-_145136125_145136202	0.0262542	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chrX_-_24575375_24575386	0.0262498	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr3_-_52779911_52780035	0.0262417	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg18_v1_chr7_-_99612757_99612970	0.0262188	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr20_+_29931257_29931292	0.0262051	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg18_v1_chr14_-_49767840_49767861	0.0261684	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr19_+_46207335_46207421	0.0261552	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chr11_-_71469082_71469247	0.0258921	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr11_+_125730822_125730878	0.0258765	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr7_+_156496360_156496374	0.0258092	SOX2.p2	BC022831|LOC645249|645249|hypothetical LOC645249	BC033117|LOC645249|645249|hypothetical LOC645249
hg18_v1_chr1_-_238842071_238842084	0.0257916	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg18_v1_chr11_-_62753574_62753699	0.0257637	SOX2.p2	AK127610|SLC22A25|387601|solute carrier family 22, member 25	BC101315|SLC22A25|387601|solute carrier family 22, member 25	BC101314|SLC22A25|387601|solute carrier family 22, member 25	AY437532|SLC22A25|387601|solute carrier family 22, member 25	BC101316|SLC22A25|387601|solute carrier family 22, member 25	BC101317|SLC22A25|387601|solute carrier family 22, member 25	NM_199352|SLC22A25|387601|solute carrier family 22, member 25
hg18_v1_chr17_-_64752550_64752581	0.025742	SOX2.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg18_v1_chr17_+_7900926_7900928	0.0256832	SOX2.p2	
hg18_v1_chr16_-_79668304_79668372	0.0256661	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg18_v1_chr14_-_20562962_20563111	0.0256632	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg18_v1_chr8_+_61592105_61592132	0.0256498	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr1_-_203985701_203985724	0.0256467	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr1_-_157003095_157003115	0.0255643	SOX2.p2	NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1	BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1
hg18_v1_chr1_+_87566738_87566752	0.0255578	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr10_+_72642274_72642499	0.0255524	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg18_v1_chr15_-_58558410_58558722	0.0255369	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr1_-_150805852_150805871	0.0254366	SOX2.p2	BC131716|LCE3E|353145|late cornified envelope 3E	NM_178435|LCE3E|353145|late cornified envelope 3E
hg18_v1_chr7_-_20793028_20793090	0.0254219	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg18_v1_chr10_+_98054074_98054242	0.0253356	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	CR597750|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg18_v1_chr4_+_189297591_189297638	0.0253185	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr20_+_41519882_41519930	0.0252391	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr9_-_34610489_34610497	0.0251954	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr20_-_43410437_43410501	0.0250798	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg18_v1_chr2_-_39517795_39517815	0.0250647	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr5_+_138117017_138117044	0.0250363	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr19_-_864203_864223	0.02502	SOX2.p2	CR616662|C19orf22|91300|chromosome 19 open reading frame 22	CR619216|C19orf22|91300|chromosome 19 open reading frame 22	CR616128|C19orf22|91300|chromosome 19 open reading frame 22	CR614470|C19orf22|91300|chromosome 19 open reading frame 22	CR622307|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr6_-_27988152_27988152	0.0250198	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chr11_+_88550687_88550770	0.0249847	SOX2.p2	NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)	BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)	M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)	Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)	U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)	J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)
hg18_v1_chr14_-_103098326_103098411	0.0249479	SOX2.p2	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chr5_+_112101454_112101490	0.0248255	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr7_-_156495985_156496130	0.0247313	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1	CR623223|MNX1|3110|motor neuron and pancreas homeobox 1
hg18_v1_chr4_+_15089931_15089963	0.0246881	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr11_-_10630408_10630498	0.0246723	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr17_-_53651964_53651964	0.0246417	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg18_v1_chr6_-_111242981_111243003	0.0246074	SOX2.p2	AJ420571|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr7_-_157054403_157054504	0.0246069	SOX2.p2	CR590102|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR596761|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR604034|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg18_v1_chr19_-_54557450_54557525	0.0245634	SOX2.p2	AL832240|TEAD2|8463|TEA domain family member 2	BC051301|TEAD2|8463|TEA domain family member 2	AK300241|TEAD2|8463|TEA domain family member 2	AK290736|TEAD2|8463|TEA domain family member 2	BC007556|TEAD2|8463|TEA domain family member 2	NM_003598|TEAD2|8463|TEA domain family member 2
hg18_v1_chr2_-_203485193_203485193	0.0245381	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg18_v1_chr1_-_159369041_159369061	0.0244148	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr12_+_102982365_102982468	0.0244031	SOX2.p2	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg18_v1_chr20_-_36497328_36497445	0.02439	SOX2.p2	BC012894|LOC388796|388796|hypothetical LOC388796	BC052370|LOC388796|388796|hypothetical LOC388796	CR614522|LOC388796|388796|hypothetical LOC388796	BC032119|LOC388796|388796|hypothetical LOC388796	CR601352|LOC388796|388796|hypothetical LOC388796	BX640887|LOC388796|388796|hypothetical LOC388796
hg18_v1_chr1_-_117465872_117465936	0.024385	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	CR595070|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45	CR602755|TRIM45|80263|tripartite motif containing 45
hg18_v1_chr8_-_72436519_72436560	0.0243672	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr2_-_119840727_119840889	0.024342	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg18_v1_chr10_-_44775110_44775116	0.0242494	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chrX_+_108666725_108666765	0.0242344	SOX2.p2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr19_-_6230927_6231004	0.0242272	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg18_v1_chrX_+_122821217_122822029	0.0240003	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr2_-_170138558_170138669	0.023989	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg18_v1_chr6_+_132915522_132915524	0.0239859	SOX2.p2	AY183468|TAAR8|83551|trace amine associated receptor 8	BC069166|TAAR8|83551|trace amine associated receptor 8	NM_053278|TAAR8|83551|trace amine associated receptor 8
hg18_v1_chr9_-_73573121_73573675	0.0239372	SOX2.p2	BC140773|TMEM2|23670|transmembrane protein 2	BC144510|TMEM2|23670|transmembrane protein 2	BC171782|TMEM2|23670|transmembrane protein 2	AB037833|TMEM2|23670|transmembrane protein 2	BC146780|TMEM2|23670|transmembrane protein 2	AF137030|TMEM2|23670|transmembrane protein 2	AK300405|TMEM2|23670|transmembrane protein 2	NM_001135820|TMEM2|23670|transmembrane protein 2	NM_013390|TMEM2|23670|transmembrane protein 2
hg18_v1_chr1_-_198645455_198645609	0.0239367	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg18_v1_chr6_-_116973465_116973465	0.0239133	SOX2.p2	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)
hg18_v1_chr11_+_10439253_10439262	0.0238708	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg18_v1_chr12_-_61283474_61283480	0.0238579	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg18_v1_chr1_-_16033866_16033977	0.0238346	SOX2.p2	
hg18_v1_chr10_-_105835525_105835573	0.0238272	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg18_v1_chr4_-_57242492_57242628	0.0238115	SOX2.p2	CR611831|HOPX|84525|HOP homeobox	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg18_v1_chr18_-_27518392_27518683	0.0238003	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg18_v1_chr5_-_178984192_178984275	0.0237613	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr1_+_11674365_11674416	0.0237526	SOX2.p2	BC111064|C1orf187|374946|chromosome 1 open reading frame 187	NM_198545|C1orf187|374946|chromosome 1 open reading frame 187	AK075558|C1orf187|374946|chromosome 1 open reading frame 187	AY358750|C1orf187|374946|chromosome 1 open reading frame 187
hg18_v1_chr15_+_48261649_48261916	0.0237309	SOX2.p2	AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2
hg18_v1_chr20_-_29774258_29774397	0.0237139	SOX2.p2	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg18_v1_chr1_-_148507779_148508023	0.0236604	SOX2.p2	CR601650|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594321|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594282|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR596144|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626054|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626622|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR613868|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626391|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609960|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626805|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR597912|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR610823|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR603099|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR591331|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR612872|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR605320|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609243|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR618014|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR607278|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609659|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr4_+_74491272_74491312	0.0235385	SOX2.p2	CR610411|ALB|213|albumin	CR603329|ALB|213|albumin	CR596272|ALB|213|albumin	CR622692|ALB|213|albumin
hg18_v1_chrX_-_37916138_37916147	0.0235262	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr17_-_40348378_40348439	0.0235112	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr7_-_5429702_5429702	0.0234674	SOX2.p2	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18
hg18_v1_chr15_-_53822468_53822569	0.0234154	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr5_+_139008052_139008065	0.023408	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr15_-_39151468_39151524	0.0233929	SOX2.p2	AK057582|INO80|54617|INO80 homolog (S. cerevisiae)
hg18_v1_chr12_+_62524778_62524849	0.0233604	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr5_+_109052984_109053008	0.0233249	SOX2.p2	
hg18_v1_chr4_+_113778060_113778174	0.0232778	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr17_+_34279637_34279643	0.0232148	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg18_v1_chr18_+_7936885_7936928	0.0231944	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg18_v1_chr16_+_66902369_66902551	0.0231635	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	CR604457|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg18_v1_chr19_-_20636152_20636252	0.0231475	SOX2.p2	AK096221|ZNF626|199777|zinc finger protein 626	CR749233|ZNF626|199777|zinc finger protein 626	BC007116|ZNF626|199777|zinc finger protein 626	BX648764|ZNF626|199777|zinc finger protein 626	BC107803|ZNF626|199777|zinc finger protein 626	NM_001076675|ZNF626|199777|zinc finger protein 626	NM_145297|ZNF626|199777|zinc finger protein 626
hg18_v1_chr6_-_111243023_111243067	0.0230768	SOX2.p2	AB028951|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_-_151333624_151333624	0.0230714	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr12_+_108310906_108310906	0.0230708	SOX2.p2	NM_001101421|MYO1H|283446|myosin IH
hg18_v1_chr14_+_76717835_76717855	0.0230482	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg18_v1_chr11_+_72696963_72697141	0.023045	SOX2.p2	AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr1_+_25629968_25630176	0.023041	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr6_+_28237529_28237548	0.0229572	SOX2.p2	CR611340|ZNF389|651302|zinc finger protein 389	NM_001145129|ZNF389|651302|zinc finger protein 389
hg18_v1_chr2_+_130453704_130453706	0.0229219	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg18_v1_chr8_+_67096344_67096402	0.022885	SOX2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg18_v1_chr6_-_53517466_53517487	0.0228306	SOX2.p2	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit
hg18_v1_chr2_-_85642155_85642177	0.0227896	SOX2.p2	NM_000821|GGCX|2677|gamma-glutamyl carboxylase	NM_001142269|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr1_+_213245507_213245507	0.0227882	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr19_-_55124764_55124866	0.0227843	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr14_+_38719462_38719593	0.0227673	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr18_+_37789209_37789254	0.0227671	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg18_v1_chr1_-_52117021_52117196	0.0227545	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr11_-_61340804_61340951	0.0227328	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	CR611884|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	CR597486|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr3_-_120761092_120761170	0.02273	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg18_v1_chr1_+_25471470_25471688	0.0227254	SOX2.p2	AK297151|RHD|6007|Rh blood group, D antigen	NM_001127691|RHD|6007|Rh blood group, D antigen	NM_016124|RHD|6007|Rh blood group, D antigen	X63094|RHD|6007|Rh blood group, D antigen	BC139922|RHD|6007|Rh blood group, D antigen	AF510069|RHD|6007|Rh blood group, D antigen	AF510070|RHD|6007|Rh blood group, D antigen	AF312679|RHD|6007|Rh blood group, D antigen	Z97026|RHD|6007|Rh blood group, D antigen	DQ451878|RHD|6007|Rh blood group, D antigen	X63097|RHD|6007|Rh blood group, D antigen	AB018966|RHD|6007|Rh blood group, D antigen	AB018967|RHD|6007|Rh blood group, D antigen	AB018968|RHD|6007|Rh blood group, D antigen	AB018969|RHD|6007|Rh blood group, D antigen	AB037270|RHD|6007|Rh blood group, D antigen	AB046420|RHD|6007|Rh blood group, D antigen	AB049754|RHD|6007|Rh blood group, D antigen	AF037626|RHD|6007|Rh blood group, D antigen	AF177938|RHD|6007|Rh blood group, D antigen	AF187846|RHD|6007|Rh blood group, D antigen	AJ704215|RHD|6007|Rh blood group, D antigen	AM183924|RHD|6007|Rh blood group, D antigen	AY449381|RHD|6007|Rh blood group, D antigen	AY449382|RHD|6007|Rh blood group, D antigen	AY449383|RHD|6007|Rh blood group, D antigen	AY449384|RHD|6007|Rh blood group, D antigen	AY449385|RHD|6007|Rh blood group, D antigen	AY751491|RHD|6007|Rh blood group, D antigen	AY751492|RHD|6007|Rh blood group, D antigen	AY751493|RHD|6007|Rh blood group, D antigen	AY751494|RHD|6007|Rh blood group, D antigen	AY751495|RHD|6007|Rh blood group, D antigen	AY751496|RHD|6007|Rh blood group, D antigen	L08429|RHD|6007|Rh blood group, D antigen	S57971|RHD|6007|Rh blood group, D antigen	S70174|RHD|6007|Rh blood group, D antigen	S73913|RHD|6007|Rh blood group, D antigen	S78509|RHD|6007|Rh blood group, D antigen	S82449|RHD|6007|Rh blood group, D antigen	EU557240|RHD|6007|Rh blood group, D antigen	EU557241|RHD|6007|Rh blood group, D antigen	EU661905|RHD|6007|Rh blood group, D antigen	EU661906|RHD|6007|Rh blood group, D antigen
hg18_v1_chr11_+_49930518_49930518	0.0227223	SOX2.p2	BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13	NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13
hg18_v1_chr2_+_48610796_48610862	0.0226777	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr13_+_31503436_31503446	0.0226548	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg18_v1_chr1_+_76312962_76313138	0.022592	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr6_-_52882419_52882454	0.0225826	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	CR601508|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg18_v1_chr2_+_200879040_200879649	0.02251	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr7_-_72894774_72894822	0.022433	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg18_v1_chr11_+_94398069_94398069	0.0223902	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg18_v1_chr21_+_39739663_39739667	0.0223764	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg18_v1_chr12_-_16321885_16321885	0.0223379	SOX2.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr22_+_21852911_21853187	0.0223364	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg18_v1_chr14_+_37746937_37746954	0.0223358	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg18_v1_chr5_-_156502363_156502498	0.0223332	SOX2.p2	NM_001100816|MED7|9443|mediator complex subunit 7	AF031383|MED7|9443|mediator complex subunit 7	CR617029|MED7|9443|mediator complex subunit 7	BC005250|MED7|9443|mediator complex subunit 7	BC006968|MED7|9443|mediator complex subunit 7	AK308393|MED7|9443|mediator complex subunit 7	NM_004270|MED7|9443|mediator complex subunit 7
hg18_v1_chr7_-_93471463_93471638	0.022279	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR605582|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR601371|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg18_v1_chr10_+_91164418_91164519	0.0222399	SOX2.p2	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	CR624828|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg18_v1_chr1_-_156937065_156937109	0.0222106	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chr8_+_26491507_26491687	0.0221781	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr5_+_99898922_99899022	0.0221372	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	CR601145|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr12_+_100795480_100795698	0.0221362	SOX2.p2	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1	AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr9_-_36390212_36390295	0.0221008	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr18_+_70134089_70134089	0.0220893	SOX2.p2	CR749350|DKFZP781G0119|644041|hypothetical protein LOC644041	NM_001174123|DKFZP781G0119|644041|hypothetical protein LOC644041
hg18_v1_chr17_-_4405367_4405479	0.0220558	SOX2.p2	EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a	BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a	AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a	AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a	AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a	AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a
hg18_v1_chr9_+_124742932_124743167	0.0219656	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr11_+_112337299_112337384	0.0218705	SOX2.p2	AB209443|NCAM1|4684|neural cell adhesion molecule 1	AF005070|NCAM1|4684|neural cell adhesion molecule 1	BC047244|NCAM1|4684|neural cell adhesion molecule 1	S71824|NCAM1|4684|neural cell adhesion molecule 1	BC029119|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr12_-_116983276_116983360	0.0218243	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg18_v1_chr12_-_122272346_122272393	0.0218062	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg18_v1_chr5_-_43432969_43432997	0.0217981	SOX2.p2	AK307307|CCL28|56477|chemokine (C-C motif) ligand 28
hg18_v1_chr16_-_22293097_22293496	0.0217097	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr12_-_107551694_107551713	0.0217035	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr12_+_54316910_54316942	0.0216449	SOX2.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr21_+_26029393_26029402	0.0216025	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr9_-_98368913_98369023	0.0215985	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr10_-_61819493_61819493	0.0215695	SOX2.p2	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr11_-_46572073_46572149	0.0215484	SOX2.p2	AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1	AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr20_+_60151868_60152444	0.0215473	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg18_v1_chr5_+_161208119_161208146	0.0214114	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chrX_-_24600661_24600899	0.0213889	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr3_+_185515543_185515977	0.0213683	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr6_-_96131974_96132046	0.0213641	SOX2.p2	
hg18_v1_chr9_-_106338914_106338957	0.021344	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg18_v1_chr10_+_26545241_26545241	0.0213109	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr14_-_80757018_80757048	0.0212538	SOX2.p2	D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa
hg18_v1_chr12_+_30971104_30971158	0.0212228	SOX2.p2	AK300920|TSPAN11|441631|tetraspanin 11	NM_001080509|TSPAN11|441631|tetraspanin 11	BC146917|TSPAN11|441631|tetraspanin 11	BC146922|TSPAN11|441631|tetraspanin 11
hg18_v1_chr9_-_35101534_35101570	0.0212158	SOX2.p2	AB040972|KIAA1539|80256|KIAA1539
hg18_v1_chr3_+_151171755_151171799	0.0211695	SOX2.p2	BC012363|LOC646903|646903|hypothetical LOC646903	CR593252|LOC646903|646903|hypothetical LOC646903
hg18_v1_chr15_-_32422598_32422656	0.0211616	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	CR612859|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg18_v1_chr12_+_91654395_91654441	0.0211317	SOX2.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg18_v1_chr20_+_41519947_41520087	0.0211177	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	CR605163|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	CR606848|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr13_+_36146048_36146156	0.0211074	SOX2.p2	BC036540|C13orf36|400120|chromosome 13 open reading frame 36	NM_203451|C13orf36|400120|chromosome 13 open reading frame 36	AK294236|C13orf36|400120|chromosome 13 open reading frame 36
hg18_v1_chr11_-_133786935_133787127	0.0210916	SOX2.p2	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg18_v1_chr16_+_67130616_67130782	0.0210523	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr15_+_57067141_57067157	0.0209782	SOX2.p2	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr11_+_62189354_62189388	0.0209713	SOX2.p2	NM_001043229|METTL12|751071|methyltransferase like 12	AK297138|METTL12|751071|methyltransferase like 12	BC041359|METTL12|751071|methyltransferase like 12
hg18_v1_chr17_-_34234931_34234981	0.0209483	SOX2.p2	BC003085|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg18_v1_chrX_-_106846253_106846366	0.0209111	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	CR600468|TSC22D3|1831|TSC22 domain family, member 3	CR622973|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr6_+_42639745_42639765	0.0209101	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr3_+_184648089_184648153	0.0208254	SOX2.p2	CR603855|LOC100505687|100505687|hypothetical LOC100505687	AK057000|LOC100505687|100505687|hypothetical LOC100505687
hg18_v1_chr9_-_21984379_21984399	0.0208075	SOX2.p2	BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr3_+_57969127_57969247	0.020736	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg18_v1_chr1_-_233558071_233558110	0.0206898	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr9_+_2612099_2612126	0.0206745	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor	CR620590|VLDLR|7436|very low density lipoprotein receptor
hg18_v1_chr6_-_26305456_26305495	0.0206361	SOX2.p2	DQ892795|HIST1H3D|8351|histone cluster 1, H3d	DQ896042|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr3_+_213430_213469	0.0206327	SOX2.p2	AB209329|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg18_v1_chr5_+_180583315_180583348	0.0206162	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg18_v1_chr12_+_381001_381083	0.020597	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	CR618406|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr6_-_79844658_79844894	0.0205687	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr4_-_100284395_100284473	0.0205666	SOX2.p2	M15943|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK290835|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK295556|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	AK313649|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	BC022319|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_000670|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide
hg18_v1_chr8_-_93177057_93177057	0.0205633	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr2_-_70166903_70166922	0.0205497	SOX2.p2	AK056822|LOC400960|400960|hypothetical LOC400960
hg18_v1_chrX_+_49213543_49213553	0.0205475	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr17_+_45993338_45993447	0.0204594	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg18_v1_chr17_+_34115383_34115450	0.0204418	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr18_+_53862386_53862683	0.0203744	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr4_+_53938579_53938585	0.0203208	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr17_-_40866062_40866078	0.0202923	SOX2.p2	BC067345|SH3D20|201175|SH3 domain containing 20	NM_174919|SH3D20|201175|SH3 domain containing 20
hg18_v1_chr5_+_159781413_159781451	0.0201709	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr2_+_149119029_149119117	0.0201575	SOX2.p2	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)
hg18_v1_chr3_+_179759181_179759311	0.0201404	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr4_+_106851415_106851418	0.0201157	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg18_v1_chr7_-_148356433_148356543	0.020105	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr5_-_54639158_54639279	0.0201027	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr6_-_79844606_79844609	0.0200342	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr2_-_31491057_31491094	0.0200233	SOX2.p2	U39487|XDH|7498|xanthine dehydrogenase	D11456|XDH|7498|xanthine dehydrogenase	U06117|XDH|7498|xanthine dehydrogenase
hg18_v1_chr17_+_39620099_39620107	0.0200202	SOX2.p2	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr17_-_36507900_36507900	0.0199776	SOX2.p2	NM_031960|KRTAP4-8|728224|keratin associated protein 4-8
hg18_v1_chr1_-_20985677_20985733	0.0198463	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr10_+_104253706_104253713	0.0198461	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr11_-_60885849_60885900	0.019817	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr19_+_12641516_12641603	0.0198136	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg18_v1_chr17_-_53387493_53387857	0.0198048	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg18_v1_chr6_+_167624792_167624941	0.0198001	SOX2.p2	AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)	NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)	AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)	BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)	BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)	BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)
hg18_v1_chr5_-_136862786_136862973	0.0197848	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg18_v1_chrX_-_1291526_1291642	0.0197789	SOX2.p2	AB052639|CRLF2|64109|cytokine receptor-like factor 2	AF338733|CRLF2|64109|cytokine receptor-like factor 2	AY775789|CRLF2|64109|cytokine receptor-like factor 2	NM_001012288|CRLF2|64109|cytokine receptor-like factor 2	AF142570|CRLF2|64109|cytokine receptor-like factor 2	NM_022148|CRLF2|64109|cytokine receptor-like factor 2	AK026800|CRLF2|64109|cytokine receptor-like factor 2	AK223303|CRLF2|64109|cytokine receptor-like factor 2
hg18_v1_chr5_+_99899133_99899205	0.0197418	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr7_+_106292975_106293045	0.0196873	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr2_-_26395420_26395473	0.0196724	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg18_v1_chr1_-_52293356_52293476	0.0194647	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR593611|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR612587|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR622088|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR611104|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr1_+_205736095_205736308	0.019385	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr12_+_52960798_52960857	0.0193704	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	CR618488|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622443|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590129|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590800|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593319|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593400|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR596532|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597068|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598845|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598960|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600314|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601721|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR602906|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603477|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604435|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604458|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR608892|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610851|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610890|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611042|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611985|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612776|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR614407|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR615846|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616053|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617360|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR617756|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617885|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618573|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620105|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620193|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622067|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622713|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624282|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624664|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625195|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625490|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625937|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626448|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626484|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626498|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605048|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610363|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598050|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603757|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611088|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607943|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595283|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600495|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601024|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607779|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR609019|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611182|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR613694|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616984|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618106|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619770|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620719|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620988|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622095|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626543|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626585|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR591763|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595244|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612285|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612903|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616623|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624419|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590581|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR605418|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611606|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619167|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590877|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621589|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624350|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598479|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621950|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg18_v1_chr9_-_124630630_124630755	0.0193001	SOX2.p2	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr8_-_87590097_87590127	0.0192679	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg18_v1_chr14_-_76564374_76564501	0.0192659	SOX2.p2	AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr19_+_40831061_40831068	0.0192526	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr11_-_46572160_46572199	0.0192374	SOX2.p2	AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr20_-_1420004_1420067	0.019234	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr9_-_85512311_85512427	0.0192219	SOX2.p2	CR612259|UBQLN1|29979|ubiquilin 1	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg18_v1_chr2_+_160277273_160277300	0.0192092	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chrX_+_152565849_152566020	0.0191507	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr13_-_47775797_47775823	0.019134	SOX2.p2	
hg18_v1_chr10_-_126128539_126128596	0.0191305	SOX2.p2	NM_001146340|NKX1-2|390010|NK1 homeobox 2
hg18_v1_chr1_+_22176004_22176129	0.0191267	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg18_v1_chr7_-_150555153_150555263	0.0190882	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg18_v1_chr10_+_98582005_98582082	0.0190558	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr19_-_14490160_14490226	0.0190225	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR620425|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr5_+_98132898_98132985	0.0189954	SOX2.p2	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr5_+_94752803_94752819	0.0189588	SOX2.p2	BC034772|FAM81B|153643|family with sequence similarity 81, member B	NM_152548|FAM81B|153643|family with sequence similarity 81, member B	AK058062|FAM81B|153643|family with sequence similarity 81, member B
hg18_v1_chr7_-_135083906_135084133	0.0189125	SOX2.p2	BC137311|FAM180A|389558|family with sequence similarity 180, member A	BC137312|FAM180A|389558|family with sequence similarity 180, member A	AK297754|FAM180A|389558|family with sequence similarity 180, member A	AY358803|FAM180A|389558|family with sequence similarity 180, member A	AK290250|FAM180A|389558|family with sequence similarity 180, member A	AK310180|FAM180A|389558|family with sequence similarity 180, member A	NM_205855|FAM180A|389558|family with sequence similarity 180, member A
hg18_v1_chr5_+_173247919_173248049	0.0189076	SOX2.p2	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg18_v1_chr18_-_72336133_72336154	0.018831	SOX2.p2	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr1_+_157676135_157676172	0.0188043	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg18_v1_chr17_+_39503623_39503837	0.0187764	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR624359|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR601615|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR595523|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR623861|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607320|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR613351|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR590248|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR609384|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598130|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR608514|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR597546|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR622205|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR625794|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR615676|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR619652|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598996|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR591259|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR605360|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607017|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg18_v1_chr16_-_15644465_15644523	0.0187543	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg18_v1_chr15_-_62782427_62782469	0.0186871	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr6_-_83960351_83960412	0.0186475	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr20_+_60130963_60131116	0.0186213	SOX2.p2	CR622108|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)
hg18_v1_chr3_+_42952855_42952887	0.0186138	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr1_-_156800017_156800017	0.0186089	SOX2.p2	NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1
hg18_v1_chr13_-_20533629_20533702	0.018574	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr14_+_19993545_19993644	0.0185217	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr19_+_18357966_18357999	0.0185208	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chrX_+_136475979_136476011	0.0184587	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	NM_003413|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr13_+_27092846_27093085	0.018435	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr1_+_190811479_190811584	0.0184163	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr9_+_136358134_136358139	0.0183966	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr22_-_30072329_30072340	0.0183626	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr21_+_16024241_16024583	0.0182429	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chrX_-_153952447_153952836	0.0182314	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr3_+_153469421_153469444	0.0182024	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr5_-_77880731_77880827	0.0181947	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr3_+_123996560_123996653	0.0181767	SOX2.p2	NM_032839|DIRC2|84925|disrupted in renal carcinoma 2	AK027690|DIRC2|84925|disrupted in renal carcinoma 2	AK291176|DIRC2|84925|disrupted in renal carcinoma 2	BC039821|DIRC2|84925|disrupted in renal carcinoma 2	BC033738|DIRC2|84925|disrupted in renal carcinoma 2
hg18_v1_chr14_-_23106779_23106904	0.0181689	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	CR614596|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chr3_-_166278969_166278976	0.0181666	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr3_+_187840842_187841077	0.0181631	SOX2.p2	AF534529|FETUB|26998|fetuin B	AJ242928|FETUB|26998|fetuin B	NM_014375|FETUB|26998|fetuin B	AB017551|FETUB|26998|fetuin B	BC069670|FETUB|26998|fetuin B	BC069820|FETUB|26998|fetuin B	BC114616|FETUB|26998|fetuin B	CR603548|FETUB|26998|fetuin B	BC074734|FETUB|26998|fetuin B	AY373820|FETUB|26998|fetuin B	AY373821|FETUB|26998|fetuin B	AK309647|FETUB|26998|fetuin B
hg18_v1_chr4_+_120167770_120167775	0.0181091	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr20_-_32728749_32728749	0.0180204	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr5_+_176492662_176492685	0.0179528	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr19_+_20897898_20897967	0.0179418	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85	CR604668|ZNF85|7639|zinc finger protein 85
hg18_v1_chr9_-_94226380_94226656	0.017926	SOX2.p2	AB000114|OMD|4958|osteomodulin	AK313055|OMD|4958|osteomodulin	AK225922|OMD|4958|osteomodulin	AY358872|OMD|4958|osteomodulin	BC046356|OMD|4958|osteomodulin	NM_005014|OMD|4958|osteomodulin
hg18_v1_chr20_+_29565898_29565921	0.0178883	SOX2.p2	NM_030789|HM13|81502|histocompatibility (minor) 13	NM_178580|HM13|81502|histocompatibility (minor) 13	NM_178581|HM13|81502|histocompatibility (minor) 13	NM_178582|HM13|81502|histocompatibility (minor) 13	AK314410|HM13|81502|histocompatibility (minor) 13	BC008938|HM13|81502|histocompatibility (minor) 13	BC008959|HM13|81502|histocompatibility (minor) 13	AY169310|HM13|81502|histocompatibility (minor) 13	AY169311|HM13|81502|histocompatibility (minor) 13	AY169312|HM13|81502|histocompatibility (minor) 13	AK075283|HM13|81502|histocompatibility (minor) 13	DQ168450|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr11_+_65576379_65576453	0.0178281	SOX2.p2	NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa
hg18_v1_chr9_+_124416768_124416837	0.0178092	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg18_v1_chr19_+_9593136_9593217	0.0178063	SOX2.p2	CR598956|LOC284385|284385|hypothetical LOC284385	AK097685|LOC284385|284385|hypothetical LOC284385	BC143540|LOC284385|284385|hypothetical LOC284385
hg18_v1_chr3_-_32587188_32587369	0.0177695	SOX2.p2	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR619992|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR595277|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR623843|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1
hg18_v1_chr8_+_69026895_69026917	0.0177209	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr7_-_33068699_33068996	0.0176555	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr4_-_166253374_166253448	0.0176273	SOX2.p2	BC036301|TMEM192|201931|transmembrane protein 192	BX648915|TMEM192|201931|transmembrane protein 192	BX538029|TMEM192|201931|transmembrane protein 192
hg18_v1_chr6_+_31815703_31815845	0.0175994	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6ORF26|100532732|MSH5-C6orf26 read-through transcript	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg18_v1_chr2_-_225073357_225073435	0.017589	SOX2.p2	CR603582|CUL3|8452|cullin 3
hg18_v1_chr3_-_145049853_145050062	0.0175743	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr10_-_13430024_13430067	0.0175275	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr16_+_66464425_66464468	0.0174797	SOX2.p2	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr17_-_77092569_77092729	0.0174614	SOX2.p2	CR603292|ACTG1|71|actin, gamma 1	CR610785|ACTG1|71|actin, gamma 1	CR608395|ACTG1|71|actin, gamma 1	CR624832|ACTG1|71|actin, gamma 1
hg18_v1_chr1_-_20985734_20985745	0.0174582	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr2_+_84986510_84986652	0.0174018	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr21_+_44890758_44890777	0.0173912	SOX2.p2	AB076359|KRTAP10-11|386678|keratin associated protein 10-11	NM_198692|KRTAP10-11|386678|keratin associated protein 10-11	BC131611|KRTAP10-11|386678|keratin associated protein 10-11
hg18_v1_chr7_-_127833231_127833275	0.0173707	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg18_v1_chr8_-_139995417_139995435	0.0173585	SOX2.p2	AF406780|COL22A1|169044|collagen, type XXII, alpha 1	NM_152888|COL22A1|169044|collagen, type XXII, alpha 1
hg18_v1_chr13_+_36291306_36291493	0.0173411	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg18_v1_chr1_+_144149794_144150272	0.0172896	SOX2.p2	NM_006472|TXNIP|10628|thioredoxin interacting protein	AK301203|TXNIP|10628|thioredoxin interacting protein	BX537824|TXNIP|10628|thioredoxin interacting protein	AK226090|TXNIP|10628|thioredoxin interacting protein	S73591|TXNIP|10628|thioredoxin interacting protein	BC093702|TXNIP|10628|thioredoxin interacting protein	BC093704|TXNIP|10628|thioredoxin interacting protein	AY594328|TXNIP|10628|thioredoxin interacting protein	BC024305|TXNIP|10628|thioredoxin interacting protein	AK301148|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr8_-_96030719_96030948	0.0172156	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr5_-_88215034_88215049	0.0172119	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr11_+_36572615_36572746	0.0171994	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr5_+_95093267_95093318	0.0171631	SOX2.p2	
hg18_v1_chr6_-_111243309_111243529	0.017153	SOX2.p2	BC024247|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr4_+_159909626_159909631	0.0171283	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr19_-_864224_864230	0.0171087	SOX2.p2	CR596729|C19orf22|91300|chromosome 19 open reading frame 22	NM_138774|C19orf22|91300|chromosome 19 open reading frame 22	CR614472|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr9_-_98104206_98104254	0.0171047	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg18_v1_chr14_+_69148062_69148065	0.0170898	SOX2.p2	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg18_v1_chr15_-_88148538_88148610	0.0170822	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr11_-_60885928_60885960	0.0170798	SOX2.p2	AK075559|CYBASC3|220002|cytochrome b, ascorbate dependent 3	CR600742|CYBASC3|220002|cytochrome b, ascorbate dependent 3	CR607104|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr4_+_100714995_100715066	0.0170731	SOX2.p2	AK225328|MTTP|4547|microsomal triglyceride transfer protein	BC062696|MTTP|4547|microsomal triglyceride transfer protein	X59657|MTTP|4547|microsomal triglyceride transfer protein	AK290793|MTTP|4547|microsomal triglyceride transfer protein	CR596497|MTTP|4547|microsomal triglyceride transfer protein	BC125110|MTTP|4547|microsomal triglyceride transfer protein	BC125111|MTTP|4547|microsomal triglyceride transfer protein	X75500|MTTP|4547|microsomal triglyceride transfer protein	X91148|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr12_+_100795213_100795286	0.0170436	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr3_-_11736946_11737284	0.0170423	SOX2.p2	D50911|VGLL4|9686|vestigial like 4 (Drosophila)	BC001514|VGLL4|9686|vestigial like 4 (Drosophila)	AK130542|VGLL4|9686|vestigial like 4 (Drosophila)	BC000763|VGLL4|9686|vestigial like 4 (Drosophila)	BC003038|VGLL4|9686|vestigial like 4 (Drosophila)	NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr1_-_181826086_181826277	0.0170194	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	CR593013|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr6_+_43846735_43846961	0.0170145	SOX2.p2	M27281|VEGFA|7422|vascular endothelial growth factor A	M32977|VEGFA|7422|vascular endothelial growth factor A	AY047581|VEGFA|7422|vascular endothelial growth factor A	X62568|VEGFA|7422|vascular endothelial growth factor A	EU832814|VEGFA|7422|vascular endothelial growth factor A	GQ129408|VEGFA|7422|vascular endothelial growth factor A	AB021221|VEGFA|7422|vascular endothelial growth factor A	AB451322|VEGFA|7422|vascular endothelial growth factor A	AB451451|VEGFA|7422|vascular endothelial growth factor A	AF091352|VEGFA|7422|vascular endothelial growth factor A	AF214570|VEGFA|7422|vascular endothelial growth factor A	AF430806|VEGFA|7422|vascular endothelial growth factor A	AF486837|VEGFA|7422|vascular endothelial growth factor A	AJ010438|VEGFA|7422|vascular endothelial growth factor A	AY263145|VEGFA|7422|vascular endothelial growth factor A	AY500353|VEGFA|7422|vascular endothelial growth factor A	AY766116|VEGFA|7422|vascular endothelial growth factor A	DQ229900|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr1_-_36589744_36589778	0.0169976	SOX2.p2	
hg18_v1_chr14_+_104851948_104852223	0.016954	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_001100913|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_015197|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg18_v1_chr2_-_202215593_202215684	0.0169248	SOX2.p2	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr16_+_31401939_31401939	0.0169176	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg18_v1_chr6_-_24827265_24827381	0.0168174	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg18_v1_chr20_+_29565922_29565963	0.0167579	SOX2.p2	AF172086|HM13|81502|histocompatibility (minor) 13	BC062595|HM13|81502|histocompatibility (minor) 13	AF483215|HM13|81502|histocompatibility (minor) 13	AJ345029|HM13|81502|histocompatibility (minor) 13	AK074686|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr19_+_54299686_54299780	0.0167491	SOX2.p2	CR613069|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)
hg18_v1_chr8_+_133948384_133948427	0.0167155	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg18_v1_chr12_-_45052830_45052911	0.0166983	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chr16_-_10696285_10696302	0.0166666	SOX2.p2	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg18_v1_chr11_-_6998041_6998161	0.0165717	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg18_v1_chr13_-_50315832_50316075	0.0165568	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg18_v1_chr14_+_105012106_105012244	0.0165371	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	CR612651|CRIP2|1397|cysteine-rich protein 2	CR621315|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	CR602967|CRIP2|1397|cysteine-rich protein 2	CR610735|CRIP2|1397|cysteine-rich protein 2	CR616587|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	CR617600|CRIP2|1397|cysteine-rich protein 2	CR624241|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg18_v1_chr15_+_74416129_74416154	0.0165059	SOX2.p2	CR610026|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr6_+_134800533_134800550	0.0164904	SOX2.p2	AK055166|LOC154092|154092|hypothetical LOC154092
hg18_v1_chr2_+_31310383_31310468	0.0164871	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg18_v1_chr19_-_16103996_16104128	0.0164547	SOX2.p2	
hg18_v1_chr1_-_181826292_181826381	0.0164113	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr2_+_176677479_176677495	0.0163767	SOX2.p2	
hg18_v1_chr19_+_2115119_2115157	0.0163693	SOX2.p2	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg18_v1_chrX_-_135783496_135783554	0.0163486	SOX2.p2	
hg18_v1_chr13_-_110011866_110012080	0.0163318	SOX2.p2	AJ272065|RAB20|55647|RAB20, member RAS oncogene family	DQ892145|RAB20|55647|RAB20, member RAS oncogene family	DQ895340|RAB20|55647|RAB20, member RAS oncogene family	AK000436|RAB20|55647|RAB20, member RAS oncogene family	AK000446|RAB20|55647|RAB20, member RAS oncogene family	NM_017817|RAB20|55647|RAB20, member RAS oncogene family	BC026025|RAB20|55647|RAB20, member RAS oncogene family
hg18_v1_chr18_-_20106187_20106193	0.0162557	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg18_v1_chr6_-_111242883_111242939	0.0162221	SOX2.p2	BC047513|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_+_151873134_151873170	0.016148	SOX2.p2	AF261137|C1orf77|26097|chromosome 1 open reading frame 77	NM_015607|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr10_-_13430195_13430351	0.0161409	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr16_+_10745174_10745317	0.0161098	SOX2.p2	AK310089|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	NM_002484|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK307148|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	AK223204|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC100290|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR600910|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR613650|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109322|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	BC109323|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR622882|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)	CR601815|NUBP1|4682|nucleotide binding protein 1 (MinD homolog, E. coli)
hg18_v1_chr5_+_85949511_85949517	0.01608	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr19_-_60941551_60941579	0.0160509	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr4_-_70539922_70539948	0.0159191	SOX2.p2	NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2
hg18_v1_chrX_+_65300803_65300931	0.0159178	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chr1_+_150937463_150937463	0.0159125	SOX2.p2	BC119707|LCE2A|353139|late cornified envelope 2A	BC127647|LCE2A|353139|late cornified envelope 2A	NM_178428|LCE2A|353139|late cornified envelope 2A
hg18_v1_chr20_-_4752067_4752321	0.0159124	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr2_-_55130925_55130945	0.0159094	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg18_v1_chr17_+_23670247_23670394	0.0158962	SOX2.p2	NM_014573|TMEM97|27346|transmembrane protein 97	L19183|TMEM97|27346|transmembrane protein 97	AK299511|TMEM97|27346|transmembrane protein 97	AK307678|TMEM97|27346|transmembrane protein 97	CR612870|TMEM97|27346|transmembrane protein 97	CR613993|TMEM97|27346|transmembrane protein 97	BC017362|TMEM97|27346|transmembrane protein 97	BC091504|TMEM97|27346|transmembrane protein 97	CR590967|TMEM97|27346|transmembrane protein 97	AK293331|TMEM97|27346|transmembrane protein 97
hg18_v1_chr4_-_122213018_122213143	0.015894	SOX2.p2	BC019351|C4orf31|79625|chromosome 4 open reading frame 31	AK289615|C4orf31|79625|chromosome 4 open reading frame 31	NM_024574|C4orf31|79625|chromosome 4 open reading frame 31
hg18_v1_chr16_+_4842077_4842216	0.0158509	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr2_+_113015962_113016083	0.0158242	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg18_v1_chr9_+_94127561_94127561	0.0158083	SOX2.p2	CR592049|CENPP|401541|centromere protein P	NM_001012267|CENPP|401541|centromere protein P
hg18_v1_chr1_-_44912649_44912700	0.0157937	SOX2.p2	CR457348|TMEM53|79639|transmembrane protein 53	AK026006|TMEM53|79639|transmembrane protein 53	AK225405|TMEM53|79639|transmembrane protein 53	BC064520|TMEM53|79639|transmembrane protein 53	NM_024587|TMEM53|79639|transmembrane protein 53	CR592706|TMEM53|79639|transmembrane protein 53	CR608781|TMEM53|79639|transmembrane protein 53	AL832539|TMEM53|79639|transmembrane protein 53
hg18_v1_chr22_+_42908589_42908589	0.0157874	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg18_v1_chr15_+_38240555_38240713	0.0157714	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr12_-_121551424_121551519	0.0157613	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr1_+_36520751_36520823	0.0157381	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr5_+_139008091_139008137	0.0157369	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr10_+_99069007_99069087	0.0157253	SOX2.p2	NM_005479|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AK307245|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	U58975|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	BC034476|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AB074890|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas
hg18_v1_chr7_+_116289833_116289911	0.0157108	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr11_+_33236435_33236455	0.0157013	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr8_+_22078817_22078872	0.0156994	SOX2.p2	M22488|BMP1|649|bone morphogenetic protein 1	Y08723|BMP1|649|bone morphogenetic protein 1	Y08724|BMP1|649|bone morphogenetic protein 1	Y08725|BMP1|649|bone morphogenetic protein 1	U50330|BMP1|649|bone morphogenetic protein 1
hg18_v1_chr1_-_199742864_199742868	0.0156339	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr4_-_77097582_77097589	0.0156334	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg18_v1_chr18_-_52456655_52456835	0.0155724	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	CR615108|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg18_v1_chr20_+_31219543_31219620	0.0155699	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr16_+_57055049_57055113	0.0155688	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg18_v1_chr4_-_77147625_77147685	0.0155554	SOX2.p2	BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9	NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9	X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9	AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9
hg18_v1_chr5_-_150517454_150517495	0.0155366	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg18_v1_chr20_-_2592777_2592892	0.0155237	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615180|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR618774|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR611698|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615874|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR616056|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR614771|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr5_+_53787187_53787376	0.0155208	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg18_v1_chr17_-_71017509_71017563	0.0154943	SOX2.p2	AK300354|CASKIN2|57513|CASK interacting protein 2	NM_001142643|CASKIN2|57513|CASK interacting protein 2	AK315936|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr16_-_74086790_74086807	0.0154583	SOX2.p2	
hg18_v1_chr8_-_125648576_125648599	0.0154503	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr13_+_47775901_47775944	0.0154364	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr3_-_15814678_15814694	0.0154107	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr1_+_40715465_40715473	0.0153629	SOX2.p2	BC041873|ZNF642|339559|zinc finger protein 642
hg18_v1_chr14_+_51397113_51397115	0.0153567	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr1_-_20985747_20985771	0.0153352	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr5_-_150517499_150517526	0.0152744	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chr12_-_51281482_51281588	0.0152464	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg18_v1_chr1_-_201422490_201422532	0.0152163	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr8_+_17478214_17478214	0.015171	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg18_v1_chr2_+_160277219_160277263	0.0151218	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chrX_+_70360184_70360282	0.015115	SOX2.p2	BT019329|GJB1|2705|gap junction protein, beta 1, 32kDa	DQ893515|GJB1|2705|gap junction protein, beta 1, 32kDa	DQ896494|GJB1|2705|gap junction protein, beta 1, 32kDa
hg18_v1_chr6_+_42639929_42640035	0.0151138	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr14_+_23175383_23175541	0.0150941	SOX2.p2	CR610479|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR611371|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR624957|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR602571|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR621782|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg18_v1_chr4_-_120769275_120769428	0.0150757	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr9_-_129557373_129557403	0.015068	SOX2.p2	AK291393|SH2D3C|10044|SH2 domain containing 3C	NM_001142534|SH2D3C|10044|SH2 domain containing 3C	AK056068|SH2D3C|10044|SH2 domain containing 3C	NM_001142533|SH2D3C|10044|SH2 domain containing 3C
hg18_v1_chr1_-_76170563_76170703	0.0149216	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg18_v1_chr19_+_54872220_54872303	0.0148615	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr6_-_167195647_167195790	0.0148318	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr20_+_31541565_31541700	0.014802	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr9_-_122877231_122877272	0.0147081	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr15_-_40570585_40570648	0.0146919	SOX2.p2	AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg18_v1_chr16_-_70763849_70763849	0.0146783	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr13_+_57103789_57103789	0.0146766	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr17_+_64922420_64922522	0.0146445	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR616398|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR624804|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR625265|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR604345|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr17_+_43480724_43480779	0.0146397	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr6_-_167195987_167196010	0.0146165	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr7_+_23496661_23496723	0.0145856	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg18_v1_chr2_+_201644706_201645001	0.01458	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg18_v1_chr20_+_29565974_29566124	0.0145704	SOX2.p2	AJ420895|HM13|81502|histocompatibility (minor) 13	DQ896206|HM13|81502|histocompatibility (minor) 13	AF515663|HM13|81502|histocompatibility (minor) 13	CR601811|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr15_+_94676691_94676797	0.0145677	SOX2.p2	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr9_-_71476917_71477131	0.0145483	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg18_v1_chr19_-_11477395_11477659	0.0145457	SOX2.p2	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg18_v1_chr3_+_39346200_39346298	0.0145374	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chrX_+_153318452_153318533	0.0145264	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr9_+_100745531_100746077	0.014496	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	CR595376|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg18_v1_chr11_+_55554470_55554470	0.0144894	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr3_-_63824496_63824528	0.0144263	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr10_-_5035967_5036093	0.014422	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr14_+_76362467_76362629	0.0143865	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg18_v1_chr12_-_55405577_55405594	0.0143149	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg18_v1_chr3_+_138020550_138020682	0.0142567	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	CR602043|TMEM22|80723|transmembrane protein 22	CR602057|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22	CR618483|TMEM22|80723|transmembrane protein 22
hg18_v1_chr7_-_8268206_8268277	0.0142519	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr1_-_203985752_203985779	0.0141979	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr14_+_51397059_51397088	0.0141702	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr7_+_73136042_73136082	0.014165	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr4_+_35962038_35962038	0.0141535	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg18_v1_chr1_-_23730298_23730299	0.01413	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr14_-_50068928_50069192	0.0141144	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr12_+_16391795_16391978	0.0140793	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	CR618561|MGST1|4257|microsomal glutathione S-transferase 1	CR609242|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg18_v1_chr1_+_224317044_224317055	0.0140267	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr7_-_141187689_141187753	0.0140225	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg18_v1_chr4_+_81475897_81475946	0.0139674	SOX2.p2	BC034296|C4orf22|255119|chromosome 4 open reading frame 22	NM_152770|C4orf22|255119|chromosome 4 open reading frame 22	AK128642|C4orf22|255119|chromosome 4 open reading frame 22	AY349359|C4orf22|255119|chromosome 4 open reading frame 22	DQ893197|C4orf22|255119|chromosome 4 open reading frame 22	DQ893198|C4orf22|255119|chromosome 4 open reading frame 22	DQ896152|C4orf22|255119|chromosome 4 open reading frame 22	DQ896153|C4orf22|255119|chromosome 4 open reading frame 22	DQ896154|C4orf22|255119|chromosome 4 open reading frame 22	DQ896534|C4orf22|255119|chromosome 4 open reading frame 22	DQ896535|C4orf22|255119|chromosome 4 open reading frame 22
hg18_v1_chr2_+_220200530_220200667	0.0139527	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg18_v1_chr14_+_51526071_51526107	0.0138282	SOX2.p2	CR594131|C14orf166|51637|chromosome 14 open reading frame 166	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr5_-_58607673_58607701	0.0138238	SOX2.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr8_+_87947788_87947791	0.0138143	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg18_v1_chr18_+_54681040_54681159	0.0137638	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr6_-_44388964_44389045	0.0137155	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg18_v1_chr3_+_99288706_99288706	0.0137152	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr5_+_65258316_65258356	0.0136557	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr17_+_3993166_3993298	0.0136309	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	CR596829|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr19_+_57531309_57531422	0.0136143	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg18_v1_chr19_+_54530546_54530609	0.0135645	SOX2.p2	X14046|CD37|951|CD37 molecule	CR612129|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg18_v1_chr19_+_40830964_40831050	0.0135597	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr12_-_51001407_51001448	0.0135356	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg18_v1_chr13_+_30672087_30672119	0.0135342	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr9_-_115101140_115101140	0.0134937	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr5_-_172976259_172976299	0.0134799	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr19_+_62787319_62787439	0.0134771	SOX2.p2	AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)
hg18_v1_chr1_-_201422450_201422458	0.0134421	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr1_-_149955415_149955505	0.013429	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr2_+_39746141_39746141	0.0134071	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr10_+_121400881_121400925	0.0133949	SOX2.p2	AK222800|BAG3|9531|BCL2-associated athanogene 3	BC006418|BAG3|9531|BCL2-associated athanogene 3	AF127139|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr5_-_40871082_40871143	0.0133625	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg18_v1_chr19_-_5291700_5291889	0.0133576	SOX2.p2	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S
hg18_v1_chr20_+_58004811_58004823	0.0132606	SOX2.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg18_v1_chr19_+_59705824_59705946	0.0132466	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg18_v1_chrX_+_77052834_77052864	0.0132172	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr8_-_22841173_22841365	0.0132148	SOX2.p2	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4	BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4	AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4	NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4
hg18_v1_chr7_+_116289765_116289821	0.0132096	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr18_-_58946858_58946972	0.0131887	SOX2.p2	AF401211|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chrX_+_17563333_17563333	0.0131762	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg18_v1_chr8_+_61592278_61592331	0.0131689	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr6_+_57062848_57062883	0.0131603	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg18_v1_chr2_+_159360074_159360089	0.0131275	SOX2.p2	AY324399|DAPL1|92196|death associated protein-like 1	NM_001017920|DAPL1|92196|death associated protein-like 1	AF086541|DAPL1|92196|death associated protein-like 1	BC140719|DAPL1|92196|death associated protein-like 1	BC127682|DAPL1|92196|death associated protein-like 1	BC127683|DAPL1|92196|death associated protein-like 1
hg18_v1_chr5_+_139008667_139008718	0.0131059	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr12_+_64869296_64869345	0.0130951	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr2_-_55131096_55131118	0.013075	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chr4_-_186693574_186693705	0.0130457	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	CR605535|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	CR622133|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg18_v1_chr16_+_75790849_75790876	0.0130334	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr8_-_144313293_144313427	0.0130334	SOX2.p2	AK314139|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001130478|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr11_+_63510478_63510514	0.0129987	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR616043|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617285|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604649|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR609035|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617582|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604801|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR618522|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598022|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR602250|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598740|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598561|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR599600|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603813|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617783|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr14_+_51397134_51397150	0.0129141	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_+_86521781_86521781	0.0129085	SOX2.p2	NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A
hg18_v1_chr4_-_149582948_149583121	0.0128731	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr11_+_22652957_22652991	0.0128628	SOX2.p2	CR450285|GAS2|2620|growth arrest-specific 2
hg18_v1_chr1_-_2451543_2451543	0.012842	SOX2.p2	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)	DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)	NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)
hg18_v1_chr3_+_110611526_110611526	0.0127876	SOX2.p2	AK058092|FLJ25363|401082|hypothetical LOC401082	NM_001145553|FLJ25363|401082|hypothetical LOC401082
hg18_v1_chr8_-_18585721_18585904	0.0127781	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr18_+_75895333_75895576	0.0127729	SOX2.p2	AK307212|RBFA|79863|ribosome binding factor A (putative)	NM_001171967|RBFA|79863|ribosome binding factor A (putative)	NM_024805|RBFA|79863|ribosome binding factor A (putative)	AK024825|RBFA|79863|ribosome binding factor A (putative)	AK311463|RBFA|79863|ribosome binding factor A (putative)	AK311239|RBFA|79863|ribosome binding factor A (putative)	AF261073|RBFA|79863|ribosome binding factor A (putative)	AF439745|RBFA|79863|ribosome binding factor A (putative)	CR602922|RBFA|79863|ribosome binding factor A (putative)	BC057772|RBFA|79863|ribosome binding factor A (putative)	BC014195|RBFA|79863|ribosome binding factor A (putative)
hg18_v1_chr14_+_23710924_23710941	0.0127562	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg18_v1_chr5_-_179040580_179040580	0.0127398	SOX2.p2	NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)
hg18_v1_chr7_-_26202626_26202771	0.012737	SOX2.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr18_+_74930398_74930477	0.012667	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg18_v1_chr3_-_51976428_51976521	0.0126508	SOX2.p2	BC003008|PCBP4|57060|poly(rC) binding protein 4	BC004153|PCBP4|57060|poly(rC) binding protein 4	BC017098|PCBP4|57060|poly(rC) binding protein 4	NM_020418|PCBP4|57060|poly(rC) binding protein 4	AK225815|PCBP4|57060|poly(rC) binding protein 4	AK001244|PCBP4|57060|poly(rC) binding protein 4	AK023993|PCBP4|57060|poly(rC) binding protein 4	NM_001174100|PCBP4|57060|poly(rC) binding protein 4	NM_033008|PCBP4|57060|poly(rC) binding protein 4
hg18_v1_chr17_+_40141714_40141813	0.0126353	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr5_+_162865128_162865315	0.0126276	SOX2.p2	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta	NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta	AB073390|MAT2B|27430|methionine adenosyltransferase II, beta	AL136664|MAT2B|27430|methionine adenosyltransferase II, beta	BC093030|MAT2B|27430|methionine adenosyltransferase II, beta	AK096178|MAT2B|27430|methionine adenosyltransferase II, beta	BC066645|MAT2B|27430|methionine adenosyltransferase II, beta	AM393097|MAT2B|27430|methionine adenosyltransferase II, beta	AM393737|MAT2B|27430|methionine adenosyltransferase II, beta	AF182814|MAT2B|27430|methionine adenosyltransferase II, beta	AF113225|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr5_-_172976212_172976257	0.0126119	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr6_-_117853710_117853738	0.0125789	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr12_-_100748640_100748794	0.0125694	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr6_+_42639714_42639742	0.0125517	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr2_+_86801081_86801300	0.0125506	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr9_+_109086154_109086220	0.0125146	SOX2.p2	AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr1_+_199127242_199127297	0.0124816	SOX2.p2	NM_018265|C1orf106|55765|chromosome 1 open reading frame 106	AK001583|C1orf106|55765|chromosome 1 open reading frame 106	AK001763|C1orf106|55765|chromosome 1 open reading frame 106	BC106877|C1orf106|55765|chromosome 1 open reading frame 106
hg18_v1_chr7_-_137182125_137182148	0.0124747	SOX2.p2	NM_004717|DGKI|9162|diacylglycerol kinase, iota
hg18_v1_chr19_+_11327061_11327170	0.0124368	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr17_-_41625921_41625942	0.0124313	SOX2.p2	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr5_+_109053034_109053054	0.0123897	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr19_+_10625896_10625985	0.0123804	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr7_+_26404711_26404863	0.0123651	SOX2.p2	AK056484|LOC441204|441204|hypothetical locus LOC441204
hg18_v1_chr7_-_29152597_29152679	0.0123649	SOX2.p2	AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like	CR623624|CPVL|54504|carboxypeptidase, vitellogenic-like	CR607237|CPVL|54504|carboxypeptidase, vitellogenic-like	CR625045|CPVL|54504|carboxypeptidase, vitellogenic-like	CR600754|CPVL|54504|carboxypeptidase, vitellogenic-like	CR613388|CPVL|54504|carboxypeptidase, vitellogenic-like	CR603250|CPVL|54504|carboxypeptidase, vitellogenic-like	AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like	AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like	BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like	CR601820|CPVL|54504|carboxypeptidase, vitellogenic-like	CR596105|CPVL|54504|carboxypeptidase, vitellogenic-like	CR625865|CPVL|54504|carboxypeptidase, vitellogenic-like	AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like
hg18_v1_chr14_-_22825148_22825182	0.0123274	SOX2.p2	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr2_-_218865451_218865547	0.0123177	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	CR603628|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg18_v1_chr1_-_153445592_153445610	0.0122949	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg18_v1_chr14_-_21049204_21049346	0.0122851	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	CR591863|METTL3|56339|methyltransferase like 3	CR613091|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	CR591477|METTL3|56339|methyltransferase like 3	CR593531|METTL3|56339|methyltransferase like 3	CR598589|METTL3|56339|methyltransferase like 3	CR621767|METTL3|56339|methyltransferase like 3	CR626750|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	CR600918|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	CR594281|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	CR590636|METTL3|56339|methyltransferase like 3	CR606689|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg18_v1_chr17_+_72880831_72880866	0.0122737	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg18_v1_chr1_-_201422533_201422565	0.0122687	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr5_+_76418214_76418347	0.0122261	SOX2.p2	AK311179|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr11_-_67198662_67198752	0.0121971	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg18_v1_chr13_+_52500830_52500996	0.0121942	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr3_+_61522922_61523111	0.0121843	SOX2.p2	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G
hg18_v1_chr15_-_42743124_42743148	0.01217	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr12_+_110689094_110689218	0.0121363	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR618953|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR617194|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR620819|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg18_v1_chr1_+_107400789_107400988	0.0120871	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr13_-_24394913_24395026	0.0120781	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg18_v1_chr3_+_30623376_30623439	0.0120768	SOX2.p2	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr15_-_86890796_86890915	0.0120475	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg18_v1_chr17_+_27701251_27701288	0.0120366	SOX2.p2	CR617452|ZNF207|7756|zinc finger protein 207	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg18_v1_chr1_-_201422436_201422448	0.0120343	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	CR602274|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr11_+_108798047_108798060	0.0120231	SOX2.p2	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg18_v1_chr11_-_101828563_101829084	0.0120043	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr2_-_189752575_189752849	0.0119802	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr5_-_11957127_11957242	0.0119274	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr7_-_50740491_50740491	0.0119187	SOX2.p2	NM_001001550|GRB10|2887|growth factor receptor-bound protein 10	U66065|GRB10|2887|growth factor receptor-bound protein 10	U69276|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr17_+_43480723_43480723	0.0117514	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr1_+_178867796_178868004	0.0117332	SOX2.p2	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr11_-_111255354_111255390	0.0117328	SOX2.p2	AK302630|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg18_v1_chr21_+_16024157_16024235	0.0117212	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr2_+_203208456_203208508	0.01171	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr9_-_115142354_115142440	0.0116555	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg18_v1_chr9_+_122877056_122877110	0.0116426	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr15_-_97608922_97608957	0.0116313	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr17_-_33043514_33043613	0.011599	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr20_-_61317891_61318046	0.0115847	SOX2.p2	BC050284|YTHDF1|54915|YTH domain family, member 1	NM_017798|YTHDF1|54915|YTH domain family, member 1
hg18_v1_chr2_-_160277083_160277221	0.0115776	SOX2.p2	BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr13_-_29067584_29067658	0.0115486	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr10_+_104253716_104253903	0.0115202	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr17_-_70039187_70039207	0.0115096	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr17_-_60988226_60988234	0.0115046	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg18_v1_chr6_-_111243199_111243215	0.011437	SOX2.p2	AY028424|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr5_+_176492629_176492643	0.0114094	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr14_-_106084085_106084503	0.0113993	SOX2.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr22_+_37740232_37740312	0.0113775	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg18_v1_chrX_-_16798096_16798360	0.0113648	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	CR611848|RBBP7|5931|retinoblastoma binding protein 7	CR620066|RBBP7|5931|retinoblastoma binding protein 7	CR624515|RBBP7|5931|retinoblastoma binding protein 7	CR596205|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7	CR615058|RBBP7|5931|retinoblastoma binding protein 7	CR592155|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr17_+_27701291_27701298	0.0113548	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg18_v1_chr14_-_105279582_105279607	0.0113509	SOX2.p2	
hg18_v1_chr10_+_101282679_101282727	0.0113312	SOX2.p2	NM_145285|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	BC025788|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK313485|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK300856|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)
hg18_v1_chr13_-_107317460_107317460	0.0113262	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr2_+_70168064_70168133	0.0112701	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1	CR620735|PCBP1|5093|poly(rC) binding protein 1	CR624156|PCBP1|5093|poly(rC) binding protein 1	CR593186|PCBP1|5093|poly(rC) binding protein 1	CR596610|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr3_-_71376919_71377005	0.0112627	SOX2.p2	AK074321|FOXP1|27086|forkhead box P1
hg18_v1_chr5_+_149526533_149526630	0.0112378	SOX2.p2	NM_001804|CDX1|1044|caudal type homeobox 1	AF239666|CDX1|1044|caudal type homeobox 1	U51095|CDX1|1044|caudal type homeobox 1	BC096249|CDX1|1044|caudal type homeobox 1	BC096250|CDX1|1044|caudal type homeobox 1	BC096251|CDX1|1044|caudal type homeobox 1	BC096252|CDX1|1044|caudal type homeobox 1	BC127122|CDX1|1044|caudal type homeobox 1
hg18_v1_chr14_-_105279740_105279770	0.0112024	SOX2.p2	
hg18_v1_chr4_-_149577404_149577461	0.0111935	SOX2.p2	
hg18_v1_chr3_-_52248182_52248222	0.0111674	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR611569|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR593060|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR613911|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR602270|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR600187|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR607625|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR626408|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR596947|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR614000|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg18_v1_chr1_-_41399632_41399690	0.0111209	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr7_+_116289827_116289828	0.0111067	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr1_+_68070573_68070579	0.0110894	SOX2.p2	
hg18_v1_chr22_-_30072217_30072314	0.0110689	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr19_+_19872700_19872869	0.0110459	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg18_v1_chr10_+_60607232_60607356	0.0109652	SOX2.p2	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr2_-_3583724_3583784	0.0109073	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg18_v1_chr2_-_241408296_241408397	0.010869	SOX2.p2	NM_004321|KIF1A|547|kinesin family member 1A	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A
hg18_v1_chr13_+_47775888_47775897	0.0108328	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chr6_+_88356503_88356610	0.0108249	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	CR619723|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg18_v1_chr2_-_190336168_190336197	0.0108214	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg18_v1_chrX_-_11593741_11593741	0.0108117	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr17_+_72827968_72828003	0.0107648	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg18_v1_chr11_+_124294355_124294355	0.0107643	SOX2.p2	AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1
hg18_v1_chr1_-_199742589_199742589	0.0107566	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr2_+_17798860_17798924	0.0107534	SOX2.p2	CR936783|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	NM_001130009|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	AK093631|LOC284952|284952|hypothetical protein LOC284952
hg18_v1_chr1_-_151873191_151873191	0.0107373	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg18_v1_chr19_+_4983899_4983900	0.0107233	SOX2.p2	
hg18_v1_chr8_+_61592048_61592048	0.010684	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr19_+_7608020_7608035	0.0105675	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	CR611383|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	CR620863|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr1_-_29348252_29348308	0.0105633	SOX2.p2	CR594929|SRSF4|6429|serine/arginine-rich splicing factor 4
hg18_v1_chr17_+_27701300_27701417	0.0105609	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	CR616570|ZNF207|7756|zinc finger protein 207	CR617272|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg18_v1_chr15_-_32662352_32662371	0.0105134	SOX2.p2	BX647673|GOLGA8B|440270|golgin A8 family, member B
hg18_v1_chr22_+_42908548_42908567	0.0104977	SOX2.p2	AK307299|PARVG|64098|parvin, gamma
hg18_v1_chr19_+_57564981_57565025	0.0104934	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg18_v1_chr10_+_121400926_121400927	0.0104766	SOX2.p2	AK313026|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr3_+_38322430_38322486	0.0104693	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14
hg18_v1_chr19_+_46595558_46595562	0.0104643	SOX2.p2	CR620302|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr1_+_224477941_224478005	0.0104544	SOX2.p2	BC111974|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC113441|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC143784|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	AF211891|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	NM_031944|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)
hg18_v1_chr4_-_87247829_87247829	0.010437	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr15_+_89061579_89061658	0.010415	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg18_v1_chr11_-_61316628_61316664	0.0103923	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg18_v1_chr12_-_28014151_28014314	0.0103105	SOX2.p2	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg18_v1_chr5_+_96237923_96237965	0.0102979	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg18_v1_chr14_+_103099031_103099097	0.0102422	SOX2.p2	NM_032374|C14orf153|84334|chromosome 14 open reading frame 153	CR619996|C14orf153|84334|chromosome 14 open reading frame 153	AK223092|C14orf153|84334|chromosome 14 open reading frame 153	AK223103|C14orf153|84334|chromosome 14 open reading frame 153	BC007412|C14orf153|84334|chromosome 14 open reading frame 153
hg18_v1_chr6_-_76010169_76010229	0.0101549	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR610116|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr17_-_53920699_53920797	0.0101167	SOX2.p2	BC115385|HSF5|124535|heat shock transcription factor family member 5	BC115386|HSF5|124535|heat shock transcription factor family member 5	BC033017|HSF5|124535|heat shock transcription factor family member 5	BC033020|HSF5|124535|heat shock transcription factor family member 5	NM_001080439|HSF5|124535|heat shock transcription factor family member 5
hg18_v1_chr12_+_5473558_5473641	0.0100909	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chrX_-_20069678_20069916	0.0100862	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	CR620297|EIF1AXP1|280661|eukaryotic translation initiation factor 1A, X-linked pseudogene 1	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg18_v1_chr5_-_147191428_147191452	0.0100722	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr1_-_44912704_44912766	0.0100489	SOX2.p2	AK296548|TMEM53|79639|transmembrane protein 53	BC007521|TMEM53|79639|transmembrane protein 53
hg18_v1_chr17_+_19492427_19493043	0.0100134	SOX2.p2	U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR591336|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2
hg18_v1_chr19_-_49725387_49725387	0.0099991	SOX2.p2	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20
hg18_v1_chr11_-_2970126_2970136	0.00998639	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr1_-_172059780_172059949	0.00997824	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr17_+_58981550_58981566	0.00996516	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr13_-_44048391_44048470	0.00993911	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr8_-_80842452_80842652	0.0099244	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr9_+_70840298_70840298	0.00990592	SOX2.p2	NM_000144|FXN|2395|frataxin	NM_001161706|FXN|2395|frataxin	NM_181425|FXN|2395|frataxin
hg18_v1_chr4_+_142361523_142361550	0.00989097	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg18_v1_chr19_+_45546369_45546492	0.00988507	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr10_+_60606352_60606437	0.0098484	SOX2.p2	AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR593164|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr20_+_43478120_43478217	0.00983679	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR602801|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR620597|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR604599|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	CR619784|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg18_v1_chrX_+_52797004_52797070	0.0097893	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg18_v1_chrX_-_15782803_15782812	0.00977705	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr2_-_233123450_233123509	0.00975839	SOX2.p2	AK056329|TIGD1|200765|tigger transposable element derived 1	NM_145702|TIGD1|200765|tigger transposable element derived 1	BC063500|TIGD1|200765|tigger transposable element derived 1
hg18_v1_chr19_+_11327173_11327218	0.00973568	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr1_+_62433061_62433148	0.00970332	SOX2.p2	NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1	NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1	BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1	BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1	AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1	AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1	AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1	BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1
hg18_v1_chr8_-_33490094_33490244	0.00970073	SOX2.p2	AK026916|C8orf41|80185|chromosome 8 open reading frame 41	BX648410|C8orf41|80185|chromosome 8 open reading frame 41	BC007387|C8orf41|80185|chromosome 8 open reading frame 41	BC066935|C8orf41|80185|chromosome 8 open reading frame 41	NM_025115|C8orf41|80185|chromosome 8 open reading frame 41	NM_001102401|C8orf41|80185|chromosome 8 open reading frame 41
hg18_v1_chr14_+_69148066_69148222	0.00958121	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg18_v1_chr5_-_96504216_96504247	0.00957674	SOX2.p2	AK307885|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr11_-_71458739_71458785	0.00956659	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr4_-_82612049_82612120	0.0095582	SOX2.p2	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B	BC036784|RASGEF1B|153020|RasGEF domain family, member 1B	AK303625|RASGEF1B|153020|RasGEF domain family, member 1B	AK056257|RASGEF1B|153020|RasGEF domain family, member 1B	NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B
hg18_v1_chr7_-_86433139_86433226	0.00955417	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr1_-_154987904_154988027	0.00949312	SOX2.p2	AK298342|HDGF|3068|hepatoma-derived growth factor	AK315514|HDGF|3068|hepatoma-derived growth factor	BC018991|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr1_+_159334774_159334815	0.00948267	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg18_v1_chr11_-_780103_780125	0.00947884	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr1_+_203463654_203463759	0.009425	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr11_-_10786875_10787026	0.00940754	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr14_+_19414230_19414266	0.00940125	SOX2.p2	BC136941|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	BC136942|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	NM_001005501|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2
hg18_v1_chr14_-_22549168_22549199	0.00939275	SOX2.p2	BC014299|C14orf93|60686|chromosome 14 open reading frame 93	CR604681|C14orf93|60686|chromosome 14 open reading frame 93	BX161507|C14orf93|60686|chromosome 14 open reading frame 93	BX161383|C14orf93|60686|chromosome 14 open reading frame 93	BX161417|C14orf93|60686|chromosome 14 open reading frame 93	CR594518|C14orf93|60686|chromosome 14 open reading frame 93	AK023026|C14orf93|60686|chromosome 14 open reading frame 93	AK022216|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93	NM_021944|C14orf93|60686|chromosome 14 open reading frame 93
hg18_v1_chr12_+_21059896_21059896	0.00936018	SOX2.p2	AF401642|LST-3TM12|338821|organic anion transporter LST-3b	NM_001009562|LST-3TM12|338821|organic anion transporter LST-3b
hg18_v1_chr19_-_12641448_12641464	0.00932482	SOX2.p2	AF078861|C19orf56|51398|chromosome 19 open reading frame 56	AF151898|C19orf56|51398|chromosome 19 open reading frame 56	NM_016145|C19orf56|51398|chromosome 19 open reading frame 56
hg18_v1_chr4_+_170778303_170778562	0.0093234	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg18_v1_chrX_-_10548458_10548673	0.00931442	SOX2.p2	AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)	AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)	Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)	BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr3_-_169295752_169295867	0.00926778	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr17_+_25828546_25828573	0.00925046	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg18_v1_chr1_+_200124620_200124808	0.00923203	SOX2.p2	BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	CR626801|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr20_+_43895802_43895965	0.00922688	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg18_v1_chr3_-_87408301_87408426	0.00922	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr5_-_1397941_1398104	0.00921273	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg18_v1_chr5_-_43349249_43349328	0.00919556	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chrX_-_24575146_24575346	0.00918143	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	CR618952|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr1_+_199108705_199108788	0.00916417	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg18_v1_chr5_+_125964505_125964558	0.00916253	SOX2.p2	AK023255|PHAX|51808|phosphorylated adaptor for RNA export	NM_032177|PHAX|51808|phosphorylated adaptor for RNA export	BC021161|PHAX|51808|phosphorylated adaptor for RNA export	AK024065|PHAX|51808|phosphorylated adaptor for RNA export	AK298497|PHAX|51808|phosphorylated adaptor for RNA export	AK225464|PHAX|51808|phosphorylated adaptor for RNA export	CR457305|PHAX|51808|phosphorylated adaptor for RNA export	DQ893213|PHAX|51808|phosphorylated adaptor for RNA export	DQ896542|PHAX|51808|phosphorylated adaptor for RNA export	CR614349|PHAX|51808|phosphorylated adaptor for RNA export
hg18_v1_chr12_+_64869271_64869283	0.0091581	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr16_-_54547443_54547443	0.00912612	SOX2.p2	AK294334|CES5A|221223|carboxylesterase 5A	NM_001190158|CES5A|221223|carboxylesterase 5A
hg18_v1_chr1_-_24179419_24179539	0.00912301	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr13_-_51631501_51631510	0.00907653	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr11_-_33714448_33714600	0.00905934	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr9_-_94127440_94127453	0.00905767	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg18_v1_chr1_+_164063684_164063736	0.00899941	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr3_+_129253977_129253995	0.0089602	SOX2.p2	AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg18_v1_chr16_-_70168449_70168498	0.00894406	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg18_v1_chrX_-_142550535_142550684	0.008944	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr1_-_23758871_23758908	0.00894349	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr5_-_39238818_39238931	0.00893108	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg18_v1_chr11_-_74914066_74914246	0.00892372	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chr1_-_1157221_1157234	0.00892359	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	CR597574|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4	CR616274|SDF4|51150|stromal cell derived factor 4	CR624179|SDF4|51150|stromal cell derived factor 4	CR626225|SDF4|51150|stromal cell derived factor 4	CR612176|SDF4|51150|stromal cell derived factor 4	CR626721|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr11_-_1728385_1728402	0.00891533	SOX2.p2	CR626060|LOC402778|402778|CD225 family protein FLJ76511
hg18_v1_chr1_+_1104939_1104972	0.00890349	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr8_+_126079900_126079928	0.00887536	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg18_v1_chr22_+_42908612_42908689	0.00886481	SOX2.p2	CR619524|PARVG|64098|parvin, gamma
hg18_v1_chr15_-_48434641_48434653	0.00885917	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr1_-_32600430_32600430	0.0088381	SOX2.p2	NM_001167676|LOC100128071|100128071|hypothetical LOC100128071
hg18_v1_chr3_-_168674502_168674527	0.00882089	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chr10_-_27483144_27483283	0.00878885	SOX2.p2	CR611030|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr2_+_241023880_241023888	0.00873629	SOX2.p2	
hg18_v1_chr11_-_780065_780091	0.00866836	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr5_+_156625629_156626032	0.00864567	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	CR596909|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr16_+_56054075_56054137	0.00863152	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR599625|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620330|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600374|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR615542|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600258|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR606923|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620622|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr2_-_64224948_64225108	0.00863095	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg18_v1_chr12_-_43556220_43556268	0.00861683	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr2_-_3583793_3583799	0.00860207	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chr11_+_63510403_63510472	0.0085841	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR610074|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617727|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603142|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR605354|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR620541|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr12_-_9159789_9159861	0.00858387	SOX2.p2	NM_000014|A2M|2|alpha-2-macroglobulin
hg18_v1_chr5_-_172688024_172688074	0.00857934	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg18_v1_chr1_-_11674264_11674293	0.00856211	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg18_v1_chr11_+_125678856_125678856	0.0085513	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg18_v1_chr2_+_206732859_206732948	0.00853466	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR612393|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR596342|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR605644|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR626685|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg18_v1_chr11_+_3786341_3786399	0.00851832	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2	CR626434|PGAP2|27315|post-GPI attachment to proteins 2
hg18_v1_chr5_-_101659864_101660151	0.00851805	SOX2.p2	AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1
hg18_v1_chr16_-_11587647_11587729	0.00848355	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg18_v1_chr19_+_16544360_16544434	0.00845308	SOX2.p2	
hg18_v1_chr22_+_29122932_29123101	0.0084296	SOX2.p2	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR607299|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg18_v1_chr6_-_76010231_76010363	0.00842276	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr17_+_72880967_72881074	0.00841321	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr11_+_122806196_122806424	0.00837302	SOX2.p2	CR599196|LOC100128242|100128242|hypothetical LOC100128242
hg18_v1_chr2_-_55130963_55131090	0.00835952	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg18_v1_chr12_+_54498129_54498146	0.00835493	SOX2.p2	AK223180|ORMDL2|29095|ORM1-like 2 (S. cerevisiae)
hg18_v1_chr15_+_20507195_20507195	0.00834839	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr9_-_131637321_131637359	0.00830495	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr7_-_35701287_35701320	0.008303	SOX2.p2	NM_022373|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr19_+_46595563_46595584	0.00828778	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR595459|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR601175|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625376|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR591555|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR620134|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625203|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR612929|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592963|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592078|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626152|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR598478|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR604642|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR610394|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR618519|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592674|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chrX_-_15782859_15782859	0.00826985	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr19_+_54883732_54883753	0.00825917	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr1_-_242681860_242682062	0.00823498	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr6_-_39390073_39390214	0.00821439	SOX2.p2	AF358910|KCNK17|89822|potassium channel, subfamily K, member 17	DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17	DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17	EU978944|KCNK17|89822|potassium channel, subfamily K, member 17	CR622971|KCNK17|89822|potassium channel, subfamily K, member 17	BC025726|KCNK17|89822|potassium channel, subfamily K, member 17	AY358853|KCNK17|89822|potassium channel, subfamily K, member 17	CR626629|KCNK17|89822|potassium channel, subfamily K, member 17	AF339912|KCNK17|89822|potassium channel, subfamily K, member 17	AK310582|KCNK17|89822|potassium channel, subfamily K, member 17	AK315273|KCNK17|89822|potassium channel, subfamily K, member 17	NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17	CR613884|KCNK17|89822|potassium channel, subfamily K, member 17	NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17
hg18_v1_chr2_+_219354692_219354744	0.0081849	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chrX_-_15782826_15782834	0.00818121	SOX2.p2	
hg18_v1_chr11_-_18769703_18769980	0.0081708	SOX2.p2	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg18_v1_chr5_+_67558217_67558217	0.00815007	SOX2.p2	M61906|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr6_+_149109841_149109963	0.00813723	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg18_v1_chr16_+_49333513_49333605	0.00811154	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr7_-_122627235_122627260	0.0080913	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr6_-_166502119_166502120	0.00807724	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr20_-_32728517_32728593	0.0080696	SOX2.p2	CR610914|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chrX_-_106846684_106846886	0.00806362	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	CR599119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr5_-_49772940_49772958	0.00805538	SOX2.p2	CR621536|EMB|133418|embigin	AK300860|EMB|133418|embigin	BC059398|EMB|133418|embigin
hg18_v1_chr19_+_7486987_7487103	0.00803347	SOX2.p2	NM_018083|ZNF358|140467|zinc finger protein 358	CR623119|ZNF358|140467|zinc finger protein 358
hg18_v1_chr5_-_132326872_132326960	0.00802513	SOX2.p2	AF213987|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr12_-_109424260_109424327	0.00801251	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr17_-_60988077_60988206	0.00799439	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg18_v1_chr6_-_152999678_152999793	0.00799101	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr3_-_39298187_39298236	0.0079529	SOX2.p2	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg18_v1_chrX_-_130250880_130251007	0.00793536	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	CR614008|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr10_+_91488704_91488791	0.00791774	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr16_-_27982277_27982330	0.00790732	SOX2.p2	AY358206|GSG1L|146395|GSG1-like	NM_001109763|GSG1L|146395|GSG1-like
hg18_v1_chr12_+_67919583_67919618	0.00789154	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr7_-_35260213_35260298	0.0078894	SOX2.p2	NM_001077653|TBX20|57057|T-box 20	NM_001166220|TBX20|57057|T-box 20	DQ986374|TBX20|57057|T-box 20
hg18_v1_chr2_-_121875610_121875641	0.00787702	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg18_v1_chr1_-_17637398_17637500	0.0078577	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr2_+_127130209_127130315	0.00785563	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr3_-_25680723_25681235	0.00783502	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr13_-_35818777_35818939	0.00783094	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr13_-_35818603_35818645	0.00778906	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr7_-_8268292_8268341	0.00777665	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr19_+_40831073_40831112	0.00777132	SOX2.p2	CR600969|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr1_+_36121382_36121399	0.00774928	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr11_-_64646157_64646247	0.00773759	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg18_v1_chrX_-_48743561_48743624	0.00772836	SOX2.p2	AB032993|GRIPAP1|56850|GRIP1 associated protein 1	AK292158|GRIPAP1|56850|GRIP1 associated protein 1	BC101544|GRIPAP1|56850|GRIP1 associated protein 1	BC101546|GRIPAP1|56850|GRIP1 associated protein 1	BX647801|GRIPAP1|56850|GRIP1 associated protein 1	BX647804|GRIPAP1|56850|GRIP1 associated protein 1	NM_020137|GRIPAP1|56850|GRIP1 associated protein 1	NM_207672|GRIPAP1|56850|GRIP1 associated protein 1
hg18_v1_chr2_+_114363919_114364115	0.00772433	SOX2.p2	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr19_+_12941431_12941474	0.00772233	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5
hg18_v1_chr20_+_32755778_32755951	0.00771932	SOX2.p2	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr5_-_118352122_118352152	0.00769594	SOX2.p2	BC114508|DTWD2|285605|DTW domain containing 2	BC114955|DTWD2|285605|DTW domain containing 2	AK091296|DTWD2|285605|DTW domain containing 2	NM_173666|DTWD2|285605|DTW domain containing 2
hg18_v1_chr9_-_15500899_15501022	0.00769414	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg18_v1_chr2_+_183651756_183652032	0.00769287	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg18_v1_chr20_-_3097070_3097206	0.00766677	SOX2.p2	AB011124|ProSAPiP1|9762|ProSAPiP1 protein	NM_014731|ProSAPiP1|9762|ProSAPiP1 protein
hg18_v1_chr1_+_78217510_78217611	0.00766	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr11_+_67871999_67872026	0.00764939	SOX2.p2	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5
hg18_v1_chr17_-_72151314_72151488	0.00764018	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg18_v1_chr6_-_33028790_33028876	0.00763814	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr19_+_3958690_3958768	0.00762674	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg18_v1_chr12_+_97433462_97433535	0.00761222	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg18_v1_chr11_+_119701047_119701047	0.00760747	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr10_+_105716925_105716984	0.00759555	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg18_v1_chr3_-_87122936_87122946	0.0075926	SOX2.p2	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr12_+_64869181_64869269	0.00759153	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr1_+_26609893_26609968	0.00758766	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr17_+_39620108_39620179	0.0075855	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR601571|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR600740|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR611823|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR601799|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr8_+_90839336_90839503	0.0075606	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr22_+_38770610_38771101	0.00755527	SOX2.p2	NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr12_+_119418215_119418286	0.00754774	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr1_+_202031425_202031430	0.00754418	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr19_-_52614151_52614194	0.00753487	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg18_v1_chr14_-_22516271_22516271	0.00751482	SOX2.p2	AK096128|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_198086|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr3_-_157755603_157755671	0.00749448	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr10_-_127397990_127398058	0.00748699	SOX2.p2	AK094354|FLJ37035|399821|hypothetical LOC399821
hg18_v1_chr8_+_69027277_69027292	0.00748166	SOX2.p2	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr13_+_47775887_47775887	0.00747189	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr6_+_96132064_96132181	0.00740642	SOX2.p2	BX640869|MANEA|79694|mannosidase, endo-alpha	NM_024641|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg18_v1_chr9_+_39345665_39345706	0.00737218	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr20_+_43470354_43470578	0.00735734	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	CR595212|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg18_v1_chr7_-_155297576_155297727	0.00735641	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg18_v1_chr17_+_38916758_38916888	0.00733345	SOX2.p2	AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg18_v1_chr3_+_14964080_14964239	0.00731421	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr16_-_30010705_30010791	0.00730098	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg18_v1_chr17_-_36587965_36587985	0.00729468	SOX2.p2	BC127252|KRTAP4-2|85291|keratin associated protein 4-2	AJ406934|KRTAP4-2|85291|keratin associated protein 4-2	NM_033062|KRTAP4-2|85291|keratin associated protein 4-2
hg18_v1_chr2_+_203901160_203901600	0.00727026	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr16_+_67131161_67131161	0.00724803	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr12_+_103904203_103904237	0.00724006	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr14_+_66896795_66896811	0.00721524	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr10_-_23673777_23673777	0.00719114	SOX2.p2	BC035732|C10orf67|256815|chromosome 10 open reading frame 67	NM_153714|C10orf67|256815|chromosome 10 open reading frame 67
hg18_v1_chr15_-_41381744_41381744	0.00718582	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg18_v1_chr7_-_139825602_139825660	0.00717136	SOX2.p2	CR601180|MKRN1|23608|makorin ring finger protein 1	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr6_-_79844503_79844573	0.00714408	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr3_-_58538530_58538530	0.00709085	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr1_-_144322295_144322385	0.00707269	SOX2.p2	CR605615|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr2_-_224410544_224410564	0.00705662	SOX2.p2	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr4_-_111339201_111339268	0.00704586	SOX2.p2	BC001305|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK027031|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_001130721|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_024090|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr2_+_182558795_182558993	0.00704485	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr17_+_71773026_71773179	0.00703679	SOX2.p2	CR613339|FAM100B|283991|family with sequence similarity 100, member B	CR599986|FAM100B|283991|family with sequence similarity 100, member B	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr8_+_30072513_30072570	0.00702226	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR620833|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr18_-_75812591_75812637	0.0070039	SOX2.p2	BC030140|PQLC1|80148|PQ loop repeat containing 1	CR602428|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr19_+_7608010_7608014	0.00700222	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr11_+_440408_440473	0.00698937	SOX2.p2	DQ891743|PTDSS2|81490|phosphatidylserine synthase 2	DQ894922|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr22_+_42908102_42908189	0.00698118	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg18_v1_chr1_+_178867787_178867795	0.00692308	SOX2.p2	BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr8_-_144313100_144313129	0.00690535	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr7_-_107558021_107558036	0.00689153	SOX2.p2	BC142619|LAMB4|22798|laminin, beta 4	BC140804|LAMB4|22798|laminin, beta 4	BC144591|LAMB4|22798|laminin, beta 4	AF028816|LAMB4|22798|laminin, beta 4	AK300385|LAMB4|22798|laminin, beta 4	NM_007356|LAMB4|22798|laminin, beta 4
hg18_v1_chr12_-_26169074_26169303	0.00689106	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chr4_+_53986759_53986864	0.00686324	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr4_+_53938567_53938578	0.00685191	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr18_-_42956645_42956729	0.00684109	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596950|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596209|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1	CR614259|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr16_-_45422540_45422638	0.00683856	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr19_-_46595053_46595212	0.00682412	SOX2.p2	CR620099|EXOSC5|56915|exosome component 5	CR592651|EXOSC5|56915|exosome component 5	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	CR621752|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg18_v1_chr4_+_189153918_189153937	0.0067877	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)	CR624529|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg18_v1_chr6_+_64403631_64403667	0.00677829	SOX2.p2	AK055678|PHF3|23469|PHD finger protein 3
hg18_v1_chr1_+_151873174_151873354	0.00676277	SOX2.p2	AF318362|C1orf77|26097|chromosome 1 open reading frame 77	AK095230|C1orf77|26097|chromosome 1 open reading frame 77	AK308713|C1orf77|26097|chromosome 1 open reading frame 77	AK309844|C1orf77|26097|chromosome 1 open reading frame 77	CR612307|C1orf77|26097|chromosome 1 open reading frame 77	BC120961|C1orf77|26097|chromosome 1 open reading frame 77	BC120962|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr10_+_93548162_93548177	0.00674936	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr10_+_44775155_44775321	0.006748	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr7_-_27158726_27158741	0.0067465	SOX2.p2	
hg18_v1_chr21_-_30460841_30460914	0.00673728	SOX2.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg18_v1_chr11_-_6661093_6661207	0.0067234	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr3_-_52287297_52287564	0.00670581	SOX2.p2	AY358264|WDR82|80335|WD repeat domain 82	BX648628|WDR82|80335|WD repeat domain 82	AK291380|WDR82|80335|WD repeat domain 82
hg18_v1_chr1_-_144322271_144322287	0.00670576	SOX2.p2	CR608817|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr14_+_66896813_66896822	0.00668945	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr15_+_38240501_38240542	0.00668835	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr21_-_31175722_31175744	0.00667279	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg18_v1_chr6_-_134540666_134540705	0.00663696	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr1_-_52116965_52116988	0.00660529	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chrX_-_15782792_15782802	0.00660448	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr12_-_55758814_55758818	0.00660345	SOX2.p2	AL833310|TMEM194A|23306|transmembrane protein 194A	AL833311|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr17_+_8154280_8154325	0.00659406	SOX2.p2	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr6_-_43089528_43089605	0.00655093	SOX2.p2	BT009831|MEA1|4201|male-enhanced antigen 1	L10400|MEA1|4201|male-enhanced antigen 1	M27937|MEA1|4201|male-enhanced antigen 1	BC001754|MEA1|4201|male-enhanced antigen 1	NM_014623|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr10_-_18988172_18988234	0.00653013	SOX2.p2	
hg18_v1_chr4_+_2440644_2440705	0.00652903	SOX2.p2	AK312534|RNF4|6047|ring finger protein 4	AK309509|RNF4|6047|ring finger protein 4	U95140|RNF4|6047|ring finger protein 4
hg18_v1_chr1_-_203985780_203985850	0.00651696	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr4_-_100492854_100492939	0.00648833	SOX2.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg18_v1_chr16_-_74086779_74086782	0.00648258	SOX2.p2	
hg18_v1_chr16_+_56054049_56054069	0.00647967	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr19_+_7608015_7608017	0.00647721	SOX2.p2	CR611137|STXBP2|6813|syntaxin binding protein 2	CR597245|STXBP2|6813|syntaxin binding protein 2	CR613567|STXBP2|6813|syntaxin binding protein 2	CR625756|STXBP2|6813|syntaxin binding protein 2	CR626453|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr12_+_105501161_105501227	0.00646763	SOX2.p2	AY102009|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg18_v1_chr19_-_14501048_14501121	0.00645814	SOX2.p2	AK301817|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr19_+_18124998_18125066	0.00645349	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg18_v1_chr14_+_51396799_51396881	0.0064166	SOX2.p2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr1_+_63605912_63605925	0.00637752	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr17_+_7252225_7252225	0.0063611	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg18_v1_chr11_+_440346_440396	0.00635346	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr1_+_112740378_112740378	0.00634949	SOX2.p2	
hg18_v1_chr7_+_16533029_16533029	0.00634721	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr3_+_129253997_129254027	0.00634133	SOX2.p2	CR623601|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg18_v1_chr16_-_67977041_67977232	0.00629245	SOX2.p2	U95970|TERF2|7014|telomeric repeat binding factor 2
hg18_v1_chr1_-_144322225_144322261	0.00624494	SOX2.p2	CR592330|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	CR613712|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr19_+_46595533_46595556	0.00623968	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626469|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr1_-_156635879_156635879	0.00623658	SOX2.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr1_+_116455898_116455898	0.00621024	SOX2.p2	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)	NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)
hg18_v1_chr5_-_43349338_43349369	0.006173	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr16_+_56054070_56054074	0.00616451	SOX2.p2	
hg18_v1_chr1_-_233558117_233558154	0.00616313	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr4_-_124063167_124063255	0.00615824	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr1_+_64012154_64012341	0.00615514	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg18_v1_chr16_-_4528739_4528847	0.00612911	SOX2.p2	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr13_+_47775776_47775886	0.00612448	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr5_-_147191334_147191392	0.00611948	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr5_+_150380325_150380407	0.00611085	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591707|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	CR613980|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615361|GPX3|2878|glutathione peroxidase 3 (plasma)	CR590594|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599318|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601235|GPX3|2878|glutathione peroxidase 3 (plasma)	CR606740|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591081|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591549|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594135|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594536|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597434|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597736|GPX3|2878|glutathione peroxidase 3 (plasma)	CR603874|GPX3|2878|glutathione peroxidase 3 (plasma)	CR605862|GPX3|2878|glutathione peroxidase 3 (plasma)	CR609961|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612224|GPX3|2878|glutathione peroxidase 3 (plasma)	CR614185|GPX3|2878|glutathione peroxidase 3 (plasma)	CR617790|GPX3|2878|glutathione peroxidase 3 (plasma)	CR618599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR619761|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621477|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623606|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623985|GPX3|2878|glutathione peroxidase 3 (plasma)	CR624695|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598624|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601731|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621207|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615321|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591367|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598855|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599527|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623984|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623260|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612204|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg18_v1_chr15_-_48434896_48434896	0.00611005	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr2_+_61146866_61146866	0.0060534	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr19_+_10515591_10515765	0.0060501	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chrX_+_152891184_152891184	0.00599123	SOX2.p2	CR613909|TMEM187|8269|transmembrane protein 187	NM_003492|TMEM187|8269|transmembrane protein 187
hg18_v1_chr12_+_15366712_15366925	0.00598745	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr20_-_54534387_54534387	0.0059482	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg18_v1_chr6_-_88468368_88468394	0.00591872	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg18_v1_chr6_+_153113624_153113734	0.00591446	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	CR593090|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg18_v1_chr6_+_71333327_71333366	0.00591242	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chr19_-_42393225_42393290	0.00591103	SOX2.p2	BC051277|ZNF585B|92285|zinc finger protein 585B	BC067088|ZNF585B|92285|zinc finger protein 585B	BC080550|ZNF585B|92285|zinc finger protein 585B	AY147015|ZNF585B|92285|zinc finger protein 585B	NM_152279|ZNF585B|92285|zinc finger protein 585B
hg18_v1_chr12_-_101835510_101835510	0.00589635	SOX2.p2	L47726|PAH|5053|phenylalanine hydroxylase	NM_000277|PAH|5053|phenylalanine hydroxylase	U49897|PAH|5053|phenylalanine hydroxylase
hg18_v1_chr12_-_47868563_47868740	0.0058815	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr14_+_23610582_23610637	0.00587643	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	CR598214|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg18_v1_chr6_-_79844618_79844656	0.00583437	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chrX_+_46938215_46938240	0.00580936	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg18_v1_chr4_-_174687104_174687146	0.00579886	SOX2.p2	BC101406|HAND2|9464|heart and neural crest derivatives expressed 2	BC101974|HAND2|9464|heart and neural crest derivatives expressed 2	BC109383|HAND2|9464|heart and neural crest derivatives expressed 2
hg18_v1_chr12_+_54132264_54132264	0.00579867	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr16_+_49333461_49333510	0.00579761	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr12_+_103904243_103904259	0.00577733	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr16_+_66464492_66464499	0.00577699	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr5_+_137716169_137716190	0.00577447	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr11_+_32994303_32994303	0.00577267	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg18_v1_chr19_-_7896974_7897058	0.00575946	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg18_v1_chr2_+_10180145_10180275	0.00574697	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr2_+_102719773_102719855	0.00573392	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg18_v1_chr12_-_55758840_55758848	0.0057218	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr7_+_99613282_99613318	0.00570363	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr13_-_25693821_25693873	0.00570289	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr13_-_51631673_51631785	0.00569766	SOX2.p2	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr1_+_178867780_178867784	0.00567707	SOX2.p2	AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr10_-_123724631_123724692	0.00565295	SOX2.p2	
hg18_v1_chr3_-_161765765_161765812	0.0056431	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr1_-_45444812_45444865	0.0056364	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg18_v1_chr12_+_97433536_97433540	0.00561628	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg18_v1_chr9_-_96395828_96395895	0.0056058	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg18_v1_chr3_-_130641539_130641584	0.0056037	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chrX_+_11221453_11221474	0.00557796	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg18_v1_chr3_-_63824544_63824848	0.00556292	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr1_-_146090802_146091049	0.0055585	SOX2.p2	AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1	BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11
hg18_v1_chr1_+_153374900_153374966	0.00555279	SOX2.p2	AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg18_v1_chr3_+_152970904_152970937	0.00555016	SOX2.p2	BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene
hg18_v1_chrX_-_48578878_48579001	0.0055351	SOX2.p2	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	CR605647|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor
hg18_v1_chr2_+_70168218_70168227	0.00552106	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr16_+_66022729_66022749	0.0055202	SOX2.p2	CR626533|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2
hg18_v1_chr12_+_49185035_49185298	0.00547577	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr7_-_148788799_148788985	0.00547574	SOX2.p2	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg18_v1_chrX_-_19727775_19727818	0.00544699	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr10_-_123724698_123724802	0.00541446	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg18_v1_chr1_-_144322291_144322294	0.00541121	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr2_+_39746525_39746618	0.00536771	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr4_+_142361494_142361516	0.00536234	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg18_v1_chr6_+_64340388_64340401	0.00536068	SOX2.p2	AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr19_+_46390980_46391026	0.005349	SOX2.p2	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg18_v1_chr4_+_164484540_164484540	0.00532576	SOX2.p2	BC042416|NPY5R|4889|neuropeptide Y receptor Y5	NM_006174|NPY5R|4889|neuropeptide Y receptor Y5
hg18_v1_chr12_+_97433545_97433601	0.00528925	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg18_v1_chr5_-_40871040_40871080	0.00528217	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg18_v1_chr1_-_203985932_203985939	0.00523664	SOX2.p2	
hg18_v1_chr19_+_7607976_7608009	0.00520444	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	CR601226|STXBP2|6813|syntaxin binding protein 2	CR611106|STXBP2|6813|syntaxin binding protein 2	CR617049|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr1_+_157824239_157824335	0.00518627	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr11_+_34029764_34029814	0.00516564	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr13_-_26232777_26232929	0.00516228	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg18_v1_chr14_-_72995012_72995029	0.00516107	SOX2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr4_+_87070449_87070449	0.00514356	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr16_+_79626817_79627211	0.00514329	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr2_-_160838397_160838474	0.00512609	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr2_+_37425240_37425382	0.00511022	SOX2.p2	CR608310|QPCT|25797|glutaminyl-peptide cyclotransferase	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase	CR596088|QPCT|25797|glutaminyl-peptide cyclotransferase	CR623589|QPCT|25797|glutaminyl-peptide cyclotransferase
hg18_v1_chr2_+_190357354_190357536	0.00508284	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr14_+_66896824_66896829	0.00503495	SOX2.p2	CR618395|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr22_-_16020076_16020152	0.00502321	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr8_-_144313053_144313076	0.00496498	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr9_-_131637361_131637380	0.00496285	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	CR608293|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr14_+_68728235_68728304	0.00495625	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr11_-_60886038_60886415	0.00493457	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr5_+_96023627_96023742	0.00493185	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg18_v1_chr17_-_30724732_30724832	0.00492447	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr14_-_34414277_34414300	0.00485497	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr16_+_31632078_31632127	0.00485466	SOX2.p2	CR611323|ZNF720|124411|zinc finger protein 720	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg18_v1_chrX_-_154495686_154495815	0.0048408	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr1_+_153445629_153445679	0.00482819	SOX2.p2	CR605982|MTX1|4580|metaxin 1	CR614718|MTX1|4580|metaxin 1	BC035616|MTX1|4580|metaxin 1	CR591813|MTX1|4580|metaxin 1	CR619225|MTX1|4580|metaxin 1
hg18_v1_chr8_-_18915443_18915690	0.00482275	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr17_-_40655347_40655423	0.00479336	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr6_+_125516499_125516778	0.00475869	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg18_v1_chr14_-_20922264_20922264	0.00475354	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg18_v1_chr1_-_154987708_154987898	0.00474403	SOX2.p2	AK292325|HDGF|3068|hepatoma-derived growth factor	DQ893406|HDGF|3068|hepatoma-derived growth factor	DQ896724|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr15_+_67532176_67532341	0.00470241	SOX2.p2	CR595749|RPLP1|6176|ribosomal protein, large, P1	CR597881|RPLP1|6176|ribosomal protein, large, P1	CR614011|RPLP1|6176|ribosomal protein, large, P1	CR615773|RPLP1|6176|ribosomal protein, large, P1	NM_001003|RPLP1|6176|ribosomal protein, large, P1	NM_213725|RPLP1|6176|ribosomal protein, large, P1	AK130958|RPLP1|6176|ribosomal protein, large, P1	AK026579|RPLP1|6176|ribosomal protein, large, P1	D28366|RPLP1|6176|ribosomal protein, large, P1	M17886|RPLP1|6176|ribosomal protein, large, P1	AY303789|RPLP1|6176|ribosomal protein, large, P1	CR616118|RPLP1|6176|ribosomal protein, large, P1	CR611187|RPLP1|6176|ribosomal protein, large, P1	BC003369|RPLP1|6176|ribosomal protein, large, P1	CR598265|RPLP1|6176|ribosomal protein, large, P1	CR623515|RPLP1|6176|ribosomal protein, large, P1	CR602613|RPLP1|6176|ribosomal protein, large, P1	BC007590|RPLP1|6176|ribosomal protein, large, P1	CR603914|RPLP1|6176|ribosomal protein, large, P1	CR622341|RPLP1|6176|ribosomal protein, large, P1	CR597116|RPLP1|6176|ribosomal protein, large, P1	CR450339|RPLP1|6176|ribosomal protein, large, P1	CR542209|RPLP1|6176|ribosomal protein, large, P1
hg18_v1_chr11_-_64302720_64302748	0.00468891	SOX2.p2	Y08766|SF1|7536|splicing factor 1
hg18_v1_chr6_-_137582237_137582239	0.00468048	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr1_-_152459697_152459896	0.00467122	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg18_v1_chr1_+_178867744_178867777	0.0046689	SOX2.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr17_-_34235078_34235133	0.00466433	SOX2.p2	AK000298|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK296115|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK225373|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	CR749362|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC008833|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_017748|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK302983|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg18_v1_chr1_+_53697659_53697732	0.00462784	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr4_+_5104140_5104223	0.0046009	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr12_+_32003648_32003674	0.00459872	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr17_+_43480674_43480722	0.00459082	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr3_-_156904690_156904690	0.00458482	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg18_v1_chr2_-_162639297_162639308	0.00456691	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr3_+_101694244_101694302	0.0045581	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr1_-_84237316_84237453	0.00454993	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr6_-_137582244_137582259	0.00454357	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr7_-_143523582_143523723	0.004501	SOX2.p2	BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg18_v1_chr2_+_70168200_70168215	0.004498	SOX2.p2	CR613158|PCBP1|5093|poly(rC) binding protein 1	U24223|PCBP1|5093|poly(rC) binding protein 1	CR618539|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr7_-_8268666_8268730	0.00449152	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr19_+_57492236_57492262	0.00449068	SOX2.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chr1_-_52116994_52117012	0.00448194	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr12_+_67489063_67489073	0.00447285	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr1_-_241484963_241484995	0.00447233	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr8_+_126079929_126079985	0.00447031	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg18_v1_chr4_-_21308415_21308415	0.00446908	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr9_+_35031101_35031101	0.00445879	SOX2.p2	NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131	NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr6_-_47385205_47385242	0.00445445	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_+_112740322_112740376	0.00444826	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr11_-_61491643_61491683	0.00444721	SOX2.p2	BC020300|FTH1|2495|ferritin, heavy polypeptide 1	BC015946|FTH1|2495|ferritin, heavy polypeptide 1	CR610503|FTH1|2495|ferritin, heavy polypeptide 1	BC063514|FTH1|2495|ferritin, heavy polypeptide 1	BC011359|FTH1|2495|ferritin, heavy polypeptide 1	BC070494|FTH1|2495|ferritin, heavy polypeptide 1	AB062402|FTH1|2495|ferritin, heavy polypeptide 1	BC013724|FTH1|2495|ferritin, heavy polypeptide 1	BC073750|FTH1|2495|ferritin, heavy polypeptide 1	CR626495|FTH1|2495|ferritin, heavy polypeptide 1	BC000857|FTH1|2495|ferritin, heavy polypeptide 1	BC035441|FTH1|2495|ferritin, heavy polypeptide 1	CR599520|FTH1|2495|ferritin, heavy polypeptide 1	CR624378|FTH1|2495|ferritin, heavy polypeptide 1	CR619451|FTH1|2495|ferritin, heavy polypeptide 1	CR600685|FTH1|2495|ferritin, heavy polypeptide 1	AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	AK311818|FTH1|2495|ferritin, heavy polypeptide 1	BC016009|FTH1|2495|ferritin, heavy polypeptide 1	BC066341|FTH1|2495|ferritin, heavy polypeptide 1	BC066961|FTH1|2495|ferritin, heavy polypeptide 1	BC104643|FTH1|2495|ferritin, heavy polypeptide 1	BC105802|FTH1|2495|ferritin, heavy polypeptide 1	L20941|FTH1|2495|ferritin, heavy polypeptide 1	D28463|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr14_+_66896783_66896789	0.00442954	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR598254|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR601355|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr3_-_18441763_18441840	0.00442048	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg18_v1_chr3_+_95264513_95264555	0.00438115	SOX2.p2	CR594640|NSUN3|63899|NOP2/Sun domain family, member 3	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg18_v1_chr1_+_119712918_119713016	0.00437531	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr14_+_19993181_19993195	0.00437041	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr1_+_224317062_224317110	0.00436445	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr11_-_61491684_61491763	0.00435918	SOX2.p2	CR608224|FTH1|2495|ferritin, heavy polypeptide 1	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr3_+_113200275_113200591	0.00435521	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3	CR600116|TAGLN3|29114|transgelin 3
hg18_v1_chr1_+_113417387_113417551	0.00435348	SOX2.p2	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2	BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2
hg18_v1_chr19_+_63237211_63237285	0.00434621	SOX2.p2	BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1	NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1	BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1
hg18_v1_chr6_-_42822525_42822535	0.00433092	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr20_+_57612996_57613103	0.00428001	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg18_v1_chr15_+_48434397_48434507	0.00427831	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr7_+_77307382_77307508	0.00427641	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr1_+_218334041_218334110	0.00426908	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_+_202031373_202031421	0.00421443	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr20_+_34635362_34635469	0.00420825	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr1_-_183392776_183392847	0.00414142	SOX2.p2	AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr3_+_39423183_39423245	0.00411619	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	CR595716|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	CR625327|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	CR624384|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	CR594860|RPSA|3921|ribosomal protein SA	CR608513|RPSA|3921|ribosomal protein SA	CR611940|RPSA|3921|ribosomal protein SA	CR612802|RPSA|3921|ribosomal protein SA	CR593226|RPSA|3921|ribosomal protein SA	CR593481|RPSA|3921|ribosomal protein SA	CR601130|RPSA|3921|ribosomal protein SA	CR608117|RPSA|3921|ribosomal protein SA	CR609304|RPSA|3921|ribosomal protein SA	CR611471|RPSA|3921|ribosomal protein SA	CR614112|RPSA|3921|ribosomal protein SA	CR614218|RPSA|3921|ribosomal protein SA	CR614827|RPSA|3921|ribosomal protein SA	CR616655|RPSA|3921|ribosomal protein SA	CR618995|RPSA|3921|ribosomal protein SA	CR623213|RPSA|3921|ribosomal protein SA	CR623621|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	CR590550|RPSA|3921|ribosomal protein SA	CR609795|RPSA|3921|ribosomal protein SA	CR614557|RPSA|3921|ribosomal protein SA	CR625028|RPSA|3921|ribosomal protein SA	CR626563|RPSA|3921|ribosomal protein SA	CR599598|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	CR600444|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA	CR626298|RPSA|3921|ribosomal protein SA
hg18_v1_chr4_-_140696740_140697026	0.00411486	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr8_+_30072463_30072507	0.00411108	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr21_+_32585994_32585994	0.00410476	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr3_+_4510030_4510033	0.00410426	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr5_-_83715947_83716057	0.00409759	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr1_-_31154023_31154247	0.00407939	SOX2.p2	AF248634|SDC3|9672|syndecan 3	NM_014654|SDC3|9672|syndecan 3
hg18_v1_chr6_-_89729989_89730065	0.00406928	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr6_-_16869579_16869773	0.00404663	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr7_-_6354933_6355138	0.00401959	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg18_v1_chr6_+_170457705_170457761	0.00399755	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr3_+_161956689_161956689	0.00397056	SOX2.p2	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr11_-_64302777_64302891	0.00396677	SOX2.p2	L49345|SF1|7536|splicing factor 1	L49380|SF1|7536|splicing factor 1	BC032676|SF1|7536|splicing factor 1	BC020217|SF1|7536|splicing factor 1	BC069273|SF1|7536|splicing factor 1	D26120|SF1|7536|splicing factor 1	D26121|SF1|7536|splicing factor 1	AK301803|SF1|7536|splicing factor 1	BC034451|SF1|7536|splicing factor 1	NM_004630|SF1|7536|splicing factor 1	NM_201995|SF1|7536|splicing factor 1	NM_201997|SF1|7536|splicing factor 1	NM_201998|SF1|7536|splicing factor 1
hg18_v1_chr6_-_134680888_134680888	0.0039575	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chrX_+_70420259_70420278	0.00393173	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr20_-_49592444_49592649	0.00392906	SOX2.p2	EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr19_+_57464659_57464678	0.00391532	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr3_-_130641460_130641469	0.00390145	SOX2.p2	CR619777|MBD4|8930|methyl-CpG binding domain protein 4	AK312878|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr3_+_73128667_73128695	0.00388553	SOX2.p2	BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	CR606592|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr6_-_26307418_26307499	0.00388033	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr15_-_48434677_48434692	0.00387571	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr1_+_20081510_20081590	0.00386133	SOX2.p2	
hg18_v1_chr6_+_33276580_33276703	0.00384996	SOX2.p2	NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	CR597948|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	CR622526|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7
hg18_v1_chr7_-_129632452_129632573	0.0038485	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg18_v1_chr18_+_19973445_19973448	0.00383976	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg18_v1_chr3_-_130641470_130641506	0.00383449	SOX2.p2	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr13_+_44592647_44592790	0.00382945	SOX2.p2	CR609785|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	CR598374|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr2_-_161058120_161058290	0.00377614	SOX2.p2	D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr6_-_136829705_136829705	0.00377081	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr17_+_58981573_58981581	0.00376671	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr8_+_38877909_38878027	0.00376151	SOX2.p2	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg18_v1_chr19_-_6410735_6410875	0.0037555	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg18_v1_chr14_-_19553191_19553191	0.00373455	SOX2.p2	NM_001004712|OR4K14|122740|olfactory receptor, family 4, subfamily K, member 14
hg18_v1_chr11_-_10546654_10546940	0.00372535	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR598862|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614245|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR604450|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR612000|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614790|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR599107|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR595979|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR597409|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR605021|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg18_v1_chr15_+_48434941_48435041	0.00370909	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr17_-_59172852_59172895	0.00369	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	CR601658|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg18_v1_chr16_-_69114931_69114960	0.00368368	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg18_v1_chr5_-_146869811_146869828	0.00367056	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr2_+_70168238_70168264	0.00365772	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1	CR600333|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr2_-_3583801_3583833	0.00365115	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	CR596638|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1	CR594242|RNASEH1|246243|ribonuclease H1
hg18_v1_chr8_+_64243662_64243735	0.00363289	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr11_+_128067598_128067598	0.00362806	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr9_+_132558972_132559004	0.00360863	SOX2.p2	AK001916|EXOSC2|23404|exosome component 2	AK296605|EXOSC2|23404|exosome component 2	NM_014285|EXOSC2|23404|exosome component 2	CR622078|EXOSC2|23404|exosome component 2	AK022460|EXOSC2|23404|exosome component 2	AK090512|EXOSC2|23404|exosome component 2	AK303163|EXOSC2|23404|exosome component 2	BC000747|EXOSC2|23404|exosome component 2	DQ892753|EXOSC2|23404|exosome component 2	EU176744|EXOSC2|23404|exosome component 2	CR590387|EXOSC2|23404|exosome component 2
hg18_v1_chr4_-_41579325_41579348	0.00360757	SOX2.p2	
hg18_v1_chr17_-_53946899_53946983	0.00358861	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr9_-_119217128_119217141	0.00358607	SOX2.p2	AB014534|ASTN2|23245|astrotactin 2	BC146756|ASTN2|23245|astrotactin 2	NM_014010|ASTN2|23245|astrotactin 2
hg18_v1_chr9_-_125070613_125070669	0.00357159	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr9_-_34602075_34602109	0.00352637	SOX2.p2	BC032136|C9orf23|138716|chromosome 9 open reading frame 23	NM_148178|C9orf23|138716|chromosome 9 open reading frame 23	NM_148179|C9orf23|138716|chromosome 9 open reading frame 23	CR619309|C9orf23|138716|chromosome 9 open reading frame 23
hg18_v1_chr11_+_55335418_55335518	0.00351912	SOX2.p2	BC136939|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109249|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109250|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	NM_001004738|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1
hg18_v1_chr6_+_170457774_170457836	0.00348822	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr16_+_57055129_57055149	0.00348005	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg18_v1_chr6_-_89729846_89729974	0.00347467	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr3_-_71625318_71625396	0.00345638	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg18_v1_chr3_-_187138500_187138518	0.00342292	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr8_-_103945566_103945576	0.00340892	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg18_v1_chr16_-_30529129_30529185	0.0033873	SOX2.p2	AK310459|ZNF689|115509|zinc finger protein 689	AB065282|ZNF689|115509|zinc finger protein 689	BC014000|ZNF689|115509|zinc finger protein 689	NM_138447|ZNF689|115509|zinc finger protein 689
hg18_v1_chr5_-_132327090_132327128	0.00336216	SOX2.p2	BC063007|AFF4|27125|AF4/FMR2 family, member 4	BC025700|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr17_+_41457394_41457437	0.00336203	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg18_v1_chr1_+_224317056_224317059	0.00335401	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr17_+_46176105_46176113	0.00335222	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr14_-_66896167_66896472	0.0033515	SOX2.p2	CR598234|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR614271|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR591270|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR590079|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR619369|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR621010|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR600453|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR613083|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR626788|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR603153|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg18_v1_chr19_+_15058790_15058876	0.00331949	SOX2.p2	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1
hg18_v1_chr9_+_124463665_124463815	0.00330618	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg18_v1_chr18_-_75812640_75812641	0.00330141	SOX2.p2	AK301881|PQLC1|80148|PQ loop repeat containing 1	NM_001146343|PQLC1|80148|PQ loop repeat containing 1	NM_001146345|PQLC1|80148|PQ loop repeat containing 1	NM_025078|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr20_-_5539487_5539688	0.00329572	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg18_v1_chr17_+_77574476_77574568	0.00329358	SOX2.p2	BC014109|LRRC45|201255|leucine rich repeat containing 45	NM_144999|LRRC45|201255|leucine rich repeat containing 45
hg18_v1_chr17_-_53282376_53282431	0.00329339	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	CR622466|MRPS23|51649|mitochondrial ribosomal protein S23	CR622139|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg18_v1_chr17_-_44847215_44847279	0.00329272	SOX2.p2	S85655|PHB|5245|prohibitin	CR599787|PHB|5245|prohibitin	CR618484|PHB|5245|prohibitin	CR617750|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	CR599633|PHB|5245|prohibitin	CR601626|PHB|5245|prohibitin	CR621290|PHB|5245|prohibitin	CR591049|PHB|5245|prohibitin	CR619581|PHB|5245|prohibitin	CR619685|PHB|5245|prohibitin	CR626185|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg18_v1_chr4_-_82611995_82612020	0.00324869	SOX2.p2	BX648337|RASGEF1B|153020|RasGEF domain family, member 1B	BC121003|RASGEF1B|153020|RasGEF domain family, member 1B	BC121004|RASGEF1B|153020|RasGEF domain family, member 1B
hg18_v1_chr17_+_77261457_77261475	0.00322993	SOX2.p2	
hg18_v1_chr2_+_70168285_70168378	0.00322321	SOX2.p2	Z29505|PCBP1|5093|poly(rC) binding protein 1	X78137|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr3_+_10043139_10043182	0.00319564	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr1_-_52116598_52116646	0.0031891	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr3_-_25681394_25681401	0.0031783	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr9_-_119217147_119217163	0.00314848	SOX2.p2	BX649176|ASTN2|23245|astrotactin 2
hg18_v1_chr11_-_66201794_66201881	0.00314661	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	CR614869|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr16_-_29845024_29845031	0.00314201	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr8_+_136539290_136539476	0.00314132	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr13_-_25693927_25694027	0.00313878	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr2_+_46779827_46779983	0.00309919	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr8_-_72919241_72919284	0.00309668	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chr22_+_39817733_39817740	0.00305025	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg18_v1_chr11_-_45896144_45896249	0.00304706	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg18_v1_chr11_+_440260_440333	0.00302857	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr3_-_52287603_52287694	0.0030165	SOX2.p2	CR612750|WDR82|80335|WD repeat domain 82	CR616060|WDR82|80335|WD repeat domain 82
hg18_v1_chr17_-_34607257_34607505	0.00300457	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr3_-_50335113_50335284	0.00298949	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	CR595904|HYAL2|8692|hyaluronoglucosaminidase 2	CR597868|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg18_v1_chr1_-_201422368_201422433	0.00298299	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr12_+_122762835_122762863	0.00297712	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr6_-_136652625_136652681	0.00297605	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg18_v1_chr12_-_131882616_131882644	0.00293237	SOX2.p2	
hg18_v1_chr2_-_153282104_153282229	0.00292219	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg18_v1_chr16_-_18480763_18480950	0.0028831	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg18_v1_chr3_+_129254032_129254081	0.00287353	SOX2.p2	
hg18_v1_chr6_+_126702914_126703012	0.00285337	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg18_v1_chr5_-_177986678_177986694	0.00282674	SOX2.p2	AK308879|CLK4|57396|CDC-like kinase 4	BC151233|CLK4|57396|CDC-like kinase 4
hg18_v1_chr3_+_23961739_23961899	0.00281037	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr3_-_102714663_102714774	0.00280971	SOX2.p2	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg18_v1_chr16_+_66836707_66836796	0.00278954	SOX2.p2	AK300596|PLA2G15|23659|phospholipase A2, group XV	AK074828|PLA2G15|23659|phospholipase A2, group XV	NM_012320|PLA2G15|23659|phospholipase A2, group XV	AK296263|PLA2G15|23659|phospholipase A2, group XV	AK298494|PLA2G15|23659|phospholipase A2, group XV	AL110209|PLA2G15|23659|phospholipase A2, group XV	CR598578|PLA2G15|23659|phospholipase A2, group XV	BC062605|PLA2G15|23659|phospholipase A2, group XV	AK001705|PLA2G15|23659|phospholipase A2, group XV	AK222790|PLA2G15|23659|phospholipase A2, group XV
hg18_v1_chr11_+_63463009_63463111	0.00278188	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg18_v1_chr16_-_128258_128651	0.00278039	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg18_v1_chr4_-_166253453_166253497	0.00277748	SOX2.p2	CR590819|TMEM192|201931|transmembrane protein 192	NM_001100389|TMEM192|201931|transmembrane protein 192
hg18_v1_chr1_-_78217360_78217366	0.00277148	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr2_-_242205556_242205588	0.00276732	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr19_-_60827732_60827745	0.002759	SOX2.p2	CR618267|ZNF784|147808|zinc finger protein 784	AK074859|ZNF784|147808|zinc finger protein 784
hg18_v1_chr13_-_51922731_51922806	0.00275568	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr7_-_20792948_20792959	0.00274716	SOX2.p2	AK299947|SP8|221833|Sp8 transcription factor
hg18_v1_chr6_-_47385470_47385598	0.0027379	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_+_112740380_112740403	0.00273407	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr6_+_126112506_126112565	0.00273359	SOX2.p2	AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr10_-_64246080_64246127	0.00272006	SOX2.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg18_v1_chr19_-_7607852_7607854	0.00271434	SOX2.p2	
hg18_v1_chr1_+_171950684_171950754	0.00270869	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr11_+_128068982_128069034	0.00270083	SOX2.p2	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr2_+_70168407_70168436	0.00269286	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr13_+_33290205_33290250	0.00268808	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr7_+_137182230_137182315	0.00268293	SOX2.p2	
hg18_v1_chrX_-_74659982_74660000	0.00267639	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr5_+_149549712_149549843	0.00267222	SOX2.p2	AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
hg18_v1_chr12_+_6950204_6950336	0.0026536	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr17_+_77261447_77261453	0.00265038	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr10_-_1769669_1769717	0.00263989	SOX2.p2	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2	NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2
hg18_v1_chr15_-_29070909_29071210	0.00263534	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr10_+_103995248_103995295	0.00262992	SOX2.p2	BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr1_+_171950759_171950854	0.00260258	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr2_+_185171682_185171793	0.0025958	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr17_+_37422550_37422605	0.00258741	SOX2.p2	BC063498|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2
hg18_v1_chr20_-_1395463_1395490	0.00258736	SOX2.p2	CR604875|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	CR600062|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	CR605903|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg18_v1_chr17_+_58981582_58981611	0.00257092	SOX2.p2	AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR590100|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR591816|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR613886|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr2_-_85969527_85969667	0.00255361	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chrX_+_102078855_102078855	0.00252644	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg18_v1_chr6_-_35764655_35764713	0.00252335	SOX2.p2	BC111050|FKBP5|2289|FK506 binding protein 5	AK222807|FKBP5|2289|FK506 binding protein 5	AK302704|FKBP5|2289|FK506 binding protein 5	AK303356|FKBP5|2289|FK506 binding protein 5	AK312422|FKBP5|2289|FK506 binding protein 5	BX647390|FKBP5|2289|FK506 binding protein 5	NM_001145776|FKBP5|2289|FK506 binding protein 5	AF194172|FKBP5|2289|FK506 binding protein 5	U71321|FKBP5|2289|FK506 binding protein 5	NM_001145777|FKBP5|2289|FK506 binding protein 5	NM_004117|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr10_+_93548119_93548145	0.00251745	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr7_-_35701253_35701276	0.00251345	SOX2.p2	BC020264|HERPUD2|64224|HERPUD family member 2	AK055708|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr4_-_39205316_39205489	0.00250365	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr14_-_22825072_22825147	0.00246887	SOX2.p2	AB037864|HOMEZ|57594|homeobox and leucine zipper encoding	AF463523|HOMEZ|57594|homeobox and leucine zipper encoding	AK296927|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr14_+_66896830_66896838	0.00245768	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR600389|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR604321|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr20_+_35583020_35583163	0.0024397	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	CR611594|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	CR593008|NNAT|4826|neuronatin	CR597280|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	CR615297|NNAT|4826|neuronatin	CR622140|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	CR598063|NNAT|4826|neuronatin	CR620236|NNAT|4826|neuronatin	CR599948|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin	CR601930|NNAT|4826|neuronatin
hg18_v1_chr1_+_29011240_29011240	0.0024309	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg18_v1_chr10_+_102662675_102662856	0.00241786	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr16_+_68353662_68353716	0.00241594	SOX2.p2	AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr6_+_170457763_170457773	0.00241017	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr1_+_180836050_180836088	0.00240734	SOX2.p2	
hg18_v1_chr17_+_78009819_78009890	0.00239012	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	CR598397|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	CR590238|NARF|26502|nuclear prelamin A recognition factor	CR606462|NARF|26502|nuclear prelamin A recognition factor	CR595982|NARF|26502|nuclear prelamin A recognition factor	CR620704|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor	CR603660|NARF|26502|nuclear prelamin A recognition factor	CR597828|NARF|26502|nuclear prelamin A recognition factor	CR612983|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr1_+_224317030_224317035	0.00238976	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr14_+_19993204_19993283	0.00237321	SOX2.p2	CR605968|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594913|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR617692|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR618727|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR620565|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR623328|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603451|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603476|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR613058|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR622630|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611116|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR594100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR597601|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR603764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR607088|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR610342|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR599111|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR608824|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR609502|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR611978|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR605079|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR593576|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	CR595578|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr5_+_53849251_53849353	0.00236856	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg18_v1_chr3_-_130641365_130641451	0.00236037	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chrX_+_151860870_151860900	0.00235158	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chr2_+_218698980_218699089	0.0023478	SOX2.p2	NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2	U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2	L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2	U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2	BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2	AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2	AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2
hg18_v1_chr20_+_34667624_34667812	0.00234596	SOX2.p2	BC004446|C20orf24|55969|chromosome 20 open reading frame 24	BC001871|C20orf24|55969|chromosome 20 open reading frame 24	CR597224|C20orf24|55969|chromosome 20 open reading frame 24	AF274936|C20orf24|55969|chromosome 20 open reading frame 24	S83364|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr1_+_20081495_20081507	0.00233823	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg18_v1_chr5_-_134763464_134763480	0.00232468	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr8_+_65655367_65655477	0.00231092	SOX2.p2	NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22	AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22
hg18_v1_chr3_+_134985566_134985566	0.00230619	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chrX_+_77052879_77052918	0.00230311	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chrX_-_16798363_16798381	0.00229959	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr19_-_55709577_55709777	0.00229511	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg18_v1_chr16_+_57055717_57055809	0.00229182	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg18_v1_chr1_+_20081424_20081478	0.00227991	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg18_v1_chr5_-_10814179_10814340	0.00226663	SOX2.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chr5_+_148941228_148941327	0.00224496	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg18_v1_chr1_-_17637576_17637619	0.00224188	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr1_+_224317036_224317043	0.00224135	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr6_-_127706141_127706196	0.0022299	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr11_-_107235123_107235123	0.00218382	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr6_-_88356411_88356442	0.00217179	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chrX_-_74660024_74660061	0.00216704	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr15_-_71712605_71712670	0.0021634	SOX2.p2	CR615564|NPTN|27020|neuroplastin	CR615149|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg18_v1_chr3_-_187138527_187138617	0.00213877	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr17_+_77261440_77261446	0.00212798	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr1_+_61315516_61315533	0.00210737	SOX2.p2	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_-_100123124_100123232	0.00209355	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg18_v1_chr3_+_142253432_142253462	0.00205256	SOX2.p2	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg18_v1_chr19_+_62483093_62483243	0.00204421	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr16_+_31632065_31632068	0.00203019	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg18_v1_chr10_+_93548048_93548118	0.00201075	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr1_-_78217278_78217351	0.00200192	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr2_-_206732348_206732447	0.00199452	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg18_v1_chr3_+_73128629_73128665	0.0019772	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr10_+_82287637_82287637	0.00197135	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg18_v1_chr3_-_95264349_95264520	0.00196964	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr7_-_148211533_148211559	0.00194169	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr3_+_134976965_134976967	0.00191611	SOX2.p2	U88581|TF|7018|transferrin
hg18_v1_chr3_-_129023850_129024390	0.00188834	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr3_-_57174353_57174393	0.00188509	SOX2.p2	AF458067|IL17RD|54756|interleukin 17 receptor D
hg18_v1_chr2_-_108517028_108517127	0.00188191	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr19_-_47498768_47498794	0.00187757	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr19_-_53081383_53081465	0.00187387	SOX2.p2	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	CR608228|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg18_v1_chr2_+_85213884_85214457	0.00186243	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg18_v1_chr21_-_42060266_42060317	0.00185752	SOX2.p2	EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4	EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4	BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4	BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4	BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4	AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4	AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4	NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4
hg18_v1_chr9_+_106306275_106306364	0.00185524	SOX2.p2	BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1	NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1
hg18_v1_chrX_+_122923236_122923272	0.00183375	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr20_-_51633042_51633042	0.00182927	SOX2.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr10_-_128067052_128067056	0.00181032	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr8_+_104452961_104453097	0.00180791	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr9_-_135334003_135334096	0.00180724	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg18_v1_chr1_-_240228987_240229007	0.00180183	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chr10_-_27483315_27483337	0.00178531	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr17_-_24069299_24069412	0.00177414	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr4_-_40911212_40911440	0.00175583	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chrX_+_48219344_48219638	0.00172865	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595767|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595180|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR600255|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616099|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR590233|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR613129|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616867|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR606907|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR609653|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg18_v1_chr15_-_63068824_63068900	0.001719	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr4_+_120167721_120167721	0.00170367	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg18_v1_chr22_-_49317408_49317455	0.00168908	SOX2.p2	BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B	BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B
hg18_v1_chr19_-_60461656_60461717	0.00167585	SOX2.p2	BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg18_v1_chr16_+_65196125_65196129	0.00166989	SOX2.p2	CR621105|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR625182|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr9_-_131637360_131637360	0.00164674	SOX2.p2	CR604621|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr16_-_29845040_29845071	0.00163682	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr17_-_602125_602215	0.00163272	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg18_v1_chr6_-_74286876_74286906	0.00161312	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr6_-_47385313_47385382	0.00158507	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr4_-_110843999_110844081	0.00158485	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg18_v1_chr10_-_44775142_44775164	0.00157364	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr16_+_31632031_31632064	0.00151836	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg18_v1_chr20_-_61355108_61355249	0.00151519	SOX2.p2	AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4
hg18_v1_chr6_-_88356445_88356472	0.00151337	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_+_10381671_10381761	0.00150039	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	CR607764|PGD|5226|phosphogluconate dehydrogenase	CR610062|PGD|5226|phosphogluconate dehydrogenase	CR610133|PGD|5226|phosphogluconate dehydrogenase	CR609478|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	CR610891|PGD|5226|phosphogluconate dehydrogenase	CR608757|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg18_v1_chr17_+_40141586_40141591	0.00148411	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr2_-_65210695_65210752	0.00148193	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	CR616184|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg18_v1_chr11_-_107234702_107234729	0.00148016	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr12_+_97433541_97433544	0.00147651	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg18_v1_chr14_+_44674892_44674892	0.00145968	SOX2.p2	AK093422|FANCM|57697|Fanconi anemia, complementation group M
hg18_v1_chr2_+_143603368_143603433	0.0014504	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr5_+_137716285_137716383	0.00144933	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr6_-_89730066_89730066	0.00144831	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr11_+_118394350_118394450	0.00142519	SOX2.p2	CR616613|TRAPPC4|51399|trafficking protein particle complex 4	CR591716|TRAPPC4|51399|trafficking protein particle complex 4	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chrX_+_70669636_70669665	0.00141632	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr1_-_210654696_210654857	0.00140404	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg18_v1_chr19_+_63590446_63590482	0.00138392	SOX2.p2	AK223106|RPS5|6193|ribosomal protein S5	AK311938|RPS5|6193|ribosomal protein S5	D28455|RPS5|6193|ribosomal protein S5	NM_001009|RPS5|6193|ribosomal protein S5	BC015405|RPS5|6193|ribosomal protein S5	BC018828|RPS5|6193|ribosomal protein S5	CR605125|RPS5|6193|ribosomal protein S5	CR614318|RPS5|6193|ribosomal protein S5	CR606098|RPS5|6193|ribosomal protein S5	BC018151|RPS5|6193|ribosomal protein S5	CR625375|RPS5|6193|ribosomal protein S5	BC035830|RPS5|6193|ribosomal protein S5	U14970|RPS5|6193|ribosomal protein S5
hg18_v1_chr8_-_145099963_145100075	0.00134295	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg18_v1_chr15_-_48434567_48434617	0.00133208	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr11_-_64301807_64301807	0.00132457	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg18_v1_chr1_+_202031445_202031458	0.00131918	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr1_-_203985896_203985931	0.00131776	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr20_+_33506322_33506655	0.00131462	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg18_v1_chr10_-_81698840_81698840	0.00130894	SOX2.p2	BC022318|SFTPD|6441|surfactant protein D	NM_003019|SFTPD|6441|surfactant protein D
hg18_v1_chr1_-_108588186_108588225	0.00129252	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg18_v1_chr19_+_57464635_57464657	0.00126986	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr17_-_76827370_76827467	0.00125394	SOX2.p2	AK128728|C17orf56|146705|chromosome 17 open reading frame 56	BC064483|C17orf56|146705|chromosome 17 open reading frame 56	BC042155|C17orf56|146705|chromosome 17 open reading frame 56	AK056090|C17orf56|146705|chromosome 17 open reading frame 56
hg18_v1_chr3_-_187562470_187562787	0.00124718	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg18_v1_chr19_+_13090101_13090150	0.00124386	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr17_-_71580117_71580170	0.00123708	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr10_-_88720908_88721047	0.0011994	SOX2.p2	AK128041|LOC100133190|100133190|hypothetical LOC100133190
hg18_v1_chr11_+_33235743_33235980	0.00119439	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr14_+_19681734_19681734	0.00117952	SOX2.p2	NM_001004724|OR4N5|390437|olfactory receptor, family 4, subfamily N, member 5
hg18_v1_chr5_+_170221441_170221577	0.00116398	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg18_v1_chr3_-_127856647_127856686	0.00114554	SOX2.p2	NM_001173513|TXNRD3|114112|thioredoxin reductase 3	NM_052883|TXNRD3|114112|thioredoxin reductase 3
hg18_v1_chr4_-_47709717_47709717	0.00114497	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr16_+_65196133_65196152	0.00114273	SOX2.p2	CR598427|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR615620|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR619122|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR618108|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr17_-_44047299_44047299	0.00112945	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg18_v1_chr18_+_18969724_18969724	0.001129	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg18_v1_chr6_+_126112588_126112615	0.00112719	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr3_-_10042989_10043077	0.00112299	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg18_v1_chr2_+_198088559_198088564	0.00111102	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr1_-_166372244_166372247	0.00107772	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr17_+_72244224_72244529	0.001059	SOX2.p2	AF015190|MFSD11|79157|major facilitator superfamily domain containing 11	AF015186|MFSD11|79157|major facilitator superfamily domain containing 11	AF015187|MFSD11|79157|major facilitator superfamily domain containing 11
hg18_v1_chr6_+_43089991_43090000	0.00104195	SOX2.p2	CR598438|KLHDC3|116138|kelch domain containing 3	BC000295|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr13_-_29322671_29322734	0.00100723	SOX2.p2	AK056580|UBL3|5412|ubiquitin-like 3
hg18_v1_chr2_+_112996053_112996198	0.000998406	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg18_v1_chr5_+_14493905_14493927	0.000995034	SOX2.p2	CR620371|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr7_-_105712646_105712873	0.000978462	SOX2.p2	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase	BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase	CR593609|NAMPT|10135|nicotinamide phosphoribosyltransferase	NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase
hg18_v1_chr17_-_53950191_53950293	0.000962553	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr19_+_977624_977625	0.000921411	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr3_-_127856563_127856646	0.000913944	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg18_v1_chr19_+_46390916_46390972	0.000900038	SOX2.p2	AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg18_v1_chr6_+_88174408_88174462	0.000897794	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chr8_+_60194328_60194331	0.000893837	SOX2.p2	
hg18_v1_chr19_-_17432724_17432762	0.000893238	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg18_v1_chr10_+_17312654_17312716	0.000883825	SOX2.p2	CR609103|VIM|7431|vimentin
hg18_v1_chr22_-_49363209_49363371	0.000864879	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg18_v1_chrX_-_100193500_100193575	0.000848731	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chr19_-_17275083_17275281	0.000847621	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	CR618792|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg18_v1_chr6_+_127706189_127706320	0.000840181	SOX2.p2	
hg18_v1_chr12_+_27755028_27755055	0.000825431	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	CR612857|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	CR595120|MRPS35|60488|mitochondrial ribosomal protein S35	CR624689|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr1_+_36121400_36121402	0.000817727	SOX2.p2	BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr14_+_66896840_66896900	0.000804628	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr6_+_30796121_30796122	0.000771717	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chr17_-_44794325_44794833	0.000769325	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr4_+_91375204_91375204	0.000749799	SOX2.p2	BC051694|FAM190A|401145|family with sequence similarity 190, member A	NM_207491|FAM190A|401145|family with sequence similarity 190, member A
hg18_v1_chr16_+_65196031_65196119	0.000747933	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr19_-_63301418_63301541	0.000729445	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr8_+_77756077_77756089	0.000725879	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg18_v1_chr2_-_224410444_224410542	0.000715556	SOX2.p2	AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr6_+_25387630_25387645	0.000696677	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg18_v1_chr1_+_120055941_120056168	0.000690428	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	CR617402|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	CR619716|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	CR592544|PHGDH|26227|phosphoglycerate dehydrogenase	CR611188|PHGDH|26227|phosphoglycerate dehydrogenase	CR622574|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	CR600485|PHGDH|26227|phosphoglycerate dehydrogenase	CR612347|PHGDH|26227|phosphoglycerate dehydrogenase	CR616251|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg18_v1_chr10_+_28862514_28862591	0.000679045	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr6_-_43089634_43089642	0.000678177	SOX2.p2	AK309759|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr1_+_44451698_44451762	0.000666753	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg18_v1_chr13_+_44592585_44592644	0.000640996	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr1_-_210654862_210654889	0.00062891	SOX2.p2	AK297200|TMEM206|55248|transmembrane protein 206	NM_001198862|TMEM206|55248|transmembrane protein 206	AK024066|TMEM206|55248|transmembrane protein 206	NM_018252|TMEM206|55248|transmembrane protein 206
hg18_v1_chr7_-_92585205_92585234	0.00062294	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg18_v1_chr12_-_3732614_3732672	0.000583617	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr16_+_65195435_65195560	0.000581715	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr8_+_146248634_146248775	0.000579842	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg18_v1_chr7_+_139124502_139124515	0.00057604	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr20_-_30794857_30794972	0.000560528	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg18_v1_chr6_+_144206165_144206200	0.000537525	SOX2.p2	CR593625|LTV1|84946|LTV1 homolog (S. cerevisiae)	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg18_v1_chr2_+_70168487_70168517	0.000535622	SOX2.p2	
hg18_v1_chr6_+_28357292_28357466	0.000517981	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg18_v1_chr6_+_43089947_43089949	0.000516909	SOX2.p2	CR622022|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr5_+_140780720_140780786	0.000513959	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr22_+_17012704_17012764	0.000497914	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr1_-_108544261_108544325	0.000496352	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg18_v1_chr10_-_64248932_64248932	0.000494158	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg18_v1_chr3_+_130641639_130641761	0.000487372	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chrX_-_74659596_74659604	0.000469368	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr5_-_177986695_177986763	0.000468281	SOX2.p2	AK308674|CLK4|57396|CDC-like kinase 4
hg18_v1_chr2_+_47021866_47021948	0.000468247	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg18_v1_chr6_-_47385599_47385599	0.000464798	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr2_+_241023703_241023804	0.000433411	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg18_v1_chr7_+_2565172_2565191	0.000422274	SOX2.p2	AK302053|IQCE|23288|IQ motif containing E
hg18_v1_chr6_-_38778849_38778858	0.000378896	SOX2.p2	BC015934|GLO1|2739|glyoxalase I	CR625986|GLO1|2739|glyoxalase I
hg18_v1_chr1_+_149405128_149405257	0.000363699	SOX2.p2	AK301644|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	CR607615|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1	CR620396|SCNM1|79005|sodium channel modifier 1
hg18_v1_chr17_-_23950171_23950198	0.000360083	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr19_+_45774569_45774610	0.000359425	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr7_+_147667461_147667536	0.000358804	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2	CR613191|CNTNAP2|26047|contactin associated protein-like 2
hg18_v1_chr7_+_2565137_2565170	0.000357996	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg18_v1_chr6_-_47385605_47385703	0.000346506	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr14_-_20642629_20642702	0.000337912	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg18_v1_chr15_-_80611897_80611999	0.000329866	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr19_+_18655391_18655458	0.000325852	SOX2.p2	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg18_v1_chr6_+_43089964_43089968	0.00032299	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr8_+_69027166_69027208	0.000317738	SOX2.p2	AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg18_v1_chr5_-_49772973_49773028	0.000315374	SOX2.p2	NM_198449|EMB|133418|embigin
hg18_v1_chr2_+_70168443_70168483	0.000283153	SOX2.p2	CR598326|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr4_+_185064799_185064830	0.000280054	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg18_v1_chr12_+_119647953_119648071	0.000276661	SOX2.p2	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR596637|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR608104|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR615642|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR613518|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR600438|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR607224|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR606773|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR604877|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg18_v1_chr6_-_88356385_88356409	0.000268139	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR611793|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR625441|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr15_+_39412447_39412471	0.000266997	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg18_v1_chr14_+_20222575_20222657	0.000263012	SOX2.p2	CR623403|RNASE4|6038|ribonuclease, RNase A family, 4	CR622207|RNASE4|6038|ribonuclease, RNase A family, 4	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr15_+_72006015_72006173	0.000246936	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr14_-_19993032_19993106	0.00024587	SOX2.p2	CR594397|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR597694|OSGEP|55644|O-sialoglycoprotein endopeptidase	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg18_v1_chr3_+_3056307_3056307	0.000245209	SOX2.p2	AF464063|CNTN4|152330|contactin 4	NM_175612|CNTN4|152330|contactin 4
hg18_v1_chr8_+_19841120_19841170	0.000241738	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg18_v1_chr17_-_8139330_8139468	0.000234718	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr2_+_241023908_241023968	0.00022211	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg18_v1_chr6_-_47385604_47385604	0.000206233	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_175400441_175400456	0.000201314	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg18_v1_chr6_+_43089970_43089977	0.000194671	SOX2.p2	BC009460|KLHDC3|116138|kelch domain containing 3	CR608943|KLHDC3|116138|kelch domain containing 3	CR599856|KLHDC3|116138|kelch domain containing 3	CR612447|KLHDC3|116138|kelch domain containing 3	CR620802|KLHDC3|116138|kelch domain containing 3	CR602982|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr6_+_43089978_43089979	0.000191305	SOX2.p2	CR614507|KLHDC3|116138|kelch domain containing 3
hg18_v1_chr12_-_3732478_3732580	0.000184425	SOX2.p2	BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B	AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr16_+_24458349_24458440	0.000181991	SOX2.p2	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr20_+_51023159_51023212	0.000173995	SOX2.p2	AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr16_+_464844_464857	0.000169877	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg18_v1_chr17_-_3992993_3993010	0.000168497	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg18_v1_chr12_-_105165805_105166150	0.000157338	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr16_-_29844855_29845019	0.000157191	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr10_+_104211134_104211147	0.000149243	SOX2.p2	AK296583|TMEM180|79847|transmembrane protein 180
hg18_v1_chr4_+_187385618_187385706	0.000103929	SOX2.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg18_v1_chr1_+_200124412_200124439	4.74246e-05	SOX2.p2	AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr10_-_27483285_27483310	4.35942e-05	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr3_-_95264756_95264756	2.70495e-05	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr15_+_39412183_39412402	9.87604e-06	SOX2.p2	CR591711|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_001129897|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_016359|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_018454|NUSAP1|51203|nucleolar and spindle associated protein 1	AK307728|NUSAP1|51203|nucleolar and spindle associated protein 1	AK222819|NUSAP1|51203|nucleolar and spindle associated protein 1	AK290879|NUSAP1|51203|nucleolar and spindle associated protein 1	AK293168|NUSAP1|51203|nucleolar and spindle associated protein 1	BC011008|NUSAP1|51203|nucleolar and spindle associated protein 1	AF217513|NUSAP1|51203|nucleolar and spindle associated protein 1	AK225703|NUSAP1|51203|nucleolar and spindle associated protein 1	AL833611|NUSAP1|51203|nucleolar and spindle associated protein 1	AK023483|NUSAP1|51203|nucleolar and spindle associated protein 1	BC024772|NUSAP1|51203|nucleolar and spindle associated protein 1	AF090915|NUSAP1|51203|nucleolar and spindle associated protein 1	AF290612|NUSAP1|51203|nucleolar and spindle associated protein 1	BC001308|NUSAP1|51203|nucleolar and spindle associated protein 1	CR596878|NUSAP1|51203|nucleolar and spindle associated protein 1	BC012887|NUSAP1|51203|nucleolar and spindle associated protein 1
