A549 cells infected with IAV Analysis Results (GEO series: GSE147507)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
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PLAGL1 | 5.49 |
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PATZ1_KLF4 | 4.61 |
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IKZF1 | 4.09 |
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BARHL1 | 3.66 |
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HIC2 | 3.55 |
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MYB | 3.43 |
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TBP | 3.24 |
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FOXM1_TBL1XR1 | 3.20 |
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SIN3A_CHD1 | 3.17 |
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ZBTB33_CHD2 | 3.15 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.
Sample name | Condition | Replicate/Batch |
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3-9-mock1-13_S20 | ||
3-9-mock2-14_S1 | ||
3-9-wt1-15_S2 | ||
3-9-wt2-16_S16 |