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A549 cells infected with IAV Analysis Results (GEO series: GSE147507)

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Results for HMGA1

Z-value: 0.18

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Transcription factors associated with HMGA1

Gene Symbol Gene ID Gene Info
ENSG00000137309.15 high mobility group AT-hook 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HMGA1hg19_v2_chr6_+_34204642_34204664-0.247.6e-01Click!

Activity profile of HMGA1 motif

Sorted Z-values of HMGA1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_120365866 0.13 ENST00000475447.2
homogentisate 1,2-dioxygenase
chr2_-_87248975 0.12 ENST00000409310.2
ENST00000355705.3
plasminogen-like B1
chr4_+_155484155 0.11 ENST00000509493.1
fibrinogen beta chain
chr17_+_79369249 0.10 ENST00000574717.2
Uncharacterized protein
chr4_+_155484103 0.09 ENST00000302068.4
fibrinogen beta chain
chr7_+_134430212 0.09 ENST00000436461.2
caldesmon 1
chr12_+_21207503 0.09 ENST00000545916.1
solute carrier organic anion transporter family, member 1B7 (non-functional)
chr3_+_164924716 0.08 ENST00000470138.1
ENST00000498616.1
RP11-85M11.2
chr10_+_114710516 0.07 ENST00000542695.1
ENST00000346198.4
transcription factor 7-like 2 (T-cell specific, HMG-box)
chr17_-_64216748 0.07 ENST00000585162.1
apolipoprotein H (beta-2-glycoprotein I)
chr2_+_177502438 0.07 ENST00000443670.1
long intergenic non-protein coding RNA 1117
chr15_+_23810903 0.07 ENST00000564592.1
makorin ring finger protein 3
chr1_+_156308403 0.06 ENST00000481479.1
ENST00000368252.1
ENST00000466306.1
ENST00000368251.1
TSSK6 activating co-chaperone
chr3_-_107596910 0.06 ENST00000464359.2
ENST00000464823.1
ENST00000466155.1
ENST00000473528.2
ENST00000608306.1
ENST00000488852.1
ENST00000608137.1
ENST00000608307.1
ENST00000609429.1
ENST00000601385.1
ENST00000475362.1
ENST00000600240.1
ENST00000600749.1
long intergenic non-protein coding RNA 635
chr2_-_202298268 0.06 ENST00000440597.1
trafficking protein, kinesin binding 2
chr12_-_54653313 0.06 ENST00000550411.1
ENST00000439541.2
chromobox homolog 5
chr8_+_94752349 0.06 ENST00000391680.1
RBM12B antisense RNA 1
chr3_+_142342240 0.06 ENST00000497199.1
plastin 1
chr3_+_52444651 0.06 ENST00000327906.3
PHD finger protein 7
chr3_-_196910477 0.05 ENST00000447466.1
discs, large homolog 1 (Drosophila)
chr6_-_131211534 0.05 ENST00000456097.2
erythrocyte membrane protein band 4.1-like 2
chr1_+_95616933 0.05 ENST00000604203.1
TMEM56-RWDD3 readthrough
chr12_-_91546926 0.05 ENST00000550758.1
decorin
chr2_+_149447783 0.05 ENST00000449013.1
enhancer of polycomb homolog 2 (Drosophila)
chr6_+_35996859 0.05 ENST00000472333.1
mitogen-activated protein kinase 14
chr3_-_195310802 0.05 ENST00000421243.1
ENST00000453131.1
apolipoprotein D
chr17_+_70036164 0.05 ENST00000602013.1
Uncharacterized protein
chr17_-_6915646 0.05 ENST00000574377.1
ENST00000399541.2
ENST00000399540.2
ENST00000575727.1
ENST00000573939.1
Uncharacterized protein
chr2_-_222436988 0.05 ENST00000409854.1
ENST00000281821.2
ENST00000392071.4
ENST00000443796.1
EPH receptor A4
chrX_+_150565038 0.05 ENST00000370361.1
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr5_+_68513557 0.05 ENST00000256441.4
mitochondrial ribosomal protein S36
chr14_+_96949319 0.05 ENST00000554706.1
adenylate kinase 7
chr17_+_61151306 0.04 ENST00000580068.1
ENST00000580466.1
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr1_+_42928945 0.04 ENST00000428554.2
coiled-coil domain containing 30
chr17_-_71223839 0.04 ENST00000579872.1
ENST00000580032.1
family with sequence similarity 104, member A
chr3_+_136649311 0.04 ENST00000469404.1
ENST00000467911.1
NCK adaptor protein 1
chr1_+_95975672 0.04 ENST00000440116.2
ENST00000456933.1
RP11-286B14.1
chr3_+_107364769 0.04 ENST00000449271.1
ENST00000425868.1
ENST00000449213.1
bobby sox homolog (Drosophila)
chr1_-_9262678 0.04 ENST00000437157.2
RP3-510D11.1
chr9_-_15472730 0.04 ENST00000481862.1
PC4 and SFRS1 interacting protein 1
chrX_-_77150911 0.04 ENST00000373336.3
magnesium transporter 1
chr4_-_74853897 0.04 ENST00000296028.3
pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
chr3_-_121448791 0.04 ENST00000489400.1
golgin B1
chr4_+_169633310 0.04 ENST00000510998.1
palladin, cytoskeletal associated protein
chr1_-_160231451 0.04 ENST00000495887.1
DDB1 and CUL4 associated factor 8
chr3_-_196911002 0.04 ENST00000452595.1
discs, large homolog 1 (Drosophila)
chr6_-_52859046 0.04 ENST00000457564.1
ENST00000541324.1
ENST00000370960.1
glutathione S-transferase alpha 4
chr1_+_174844645 0.04 ENST00000486220.1
RAB GTPase activating protein 1-like
chr4_+_160203650 0.04 ENST00000514565.1
Rap guanine nucleotide exchange factor (GEF) 2
chr7_+_5465382 0.04 ENST00000609130.1
RP11-1275H24.2
chr16_+_53241854 0.04 ENST00000565803.1
chromodomain helicase DNA binding protein 9
chr7_+_128399002 0.04 ENST00000493278.1
calumenin
chr2_+_114195268 0.04 ENST00000259199.4
ENST00000416503.2
ENST00000433343.2
COBW domain containing 2
chr14_+_102276192 0.04 ENST00000557714.1
protein phosphatase 2, regulatory subunit B', gamma
chr12_-_118796971 0.04 ENST00000542902.1
TAO kinase 3
chr5_+_68513622 0.04 ENST00000512880.1
ENST00000602380.1
mitochondrial ribosomal protein S36
chr9_-_104145795 0.04 ENST00000259407.2
bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
chr7_+_110731062 0.04 ENST00000308478.5
ENST00000451085.1
ENST00000422987.3
ENST00000421101.1
leucine rich repeat neuronal 3
chr5_+_135496675 0.04 ENST00000507637.1
SMAD family member 5
chr12_-_54652060 0.04 ENST00000552562.1
chromobox homolog 5
chr20_-_23807358 0.04 ENST00000304725.2
cystatin SA
chr19_-_7167989 0.04 ENST00000600492.1
insulin receptor
chr13_+_76378357 0.03 ENST00000489941.2
ENST00000525373.1
LIM domain 7
chr10_-_63995871 0.03 ENST00000315289.2
rhotekin 2
chr1_-_116926718 0.03 ENST00000598661.1
Uncharacterized protein
chr9_-_14308004 0.03 ENST00000493697.1
nuclear factor I/B
chr12_-_118797475 0.03 ENST00000541786.1
ENST00000419821.2
ENST00000541878.1
TAO kinase 3
chr6_-_10115007 0.03 ENST00000485268.1
orofacial cleft 1 candidate 1
chr12_-_88423164 0.03 ENST00000298699.2
ENST00000550553.1
chromosome 12 open reading frame 50
chr12_+_9144626 0.03 ENST00000543895.1
killer cell lectin-like receptor subfamily G, member 1
chr6_-_138833630 0.03 ENST00000533765.1
NHS-like 1
chr5_-_98262240 0.03 ENST00000284049.3
chromodomain helicase DNA binding protein 1
chr14_-_75536182 0.03 ENST00000555463.1
acylphosphatase 1, erythrocyte (common) type
chr1_+_219347203 0.03 ENST00000366927.3
lysophospholipase-like 1
chr6_-_15586238 0.03 ENST00000462989.2
dystrobrevin binding protein 1
chr4_+_160025300 0.03 ENST00000505478.1
Rap guanine nucleotide exchange factor (GEF) 2
chr9_-_21482312 0.03 ENST00000448696.3
interferon, epsilon
chr9_+_70856397 0.03 ENST00000360171.6
COBW domain containing 3
chr4_+_24661479 0.03 ENST00000569621.1
RP11-496D24.2
chr12_-_122879969 0.03 ENST00000540304.1
CAP-GLY domain containing linker protein 1
chr2_+_86333340 0.03 ENST00000409783.2
ENST00000409277.3
pentatricopeptide repeat domain 3
chr15_+_77713299 0.03 ENST00000559099.1
high mobility group 20A
chr3_+_73110810 0.03 ENST00000533473.1
endogenous Bornavirus-like nucleoprotein 2
chr13_+_76378407 0.03 ENST00000447038.1
LIM domain 7
chr1_-_89591749 0.03 ENST00000370466.3
guanylate binding protein 2, interferon-inducible
chr12_-_10007448 0.03 ENST00000538152.1
C-type lectin domain family 2, member B
chr2_+_42721689 0.03 ENST00000405592.1
metastasis associated 1 family, member 3
chr16_+_69333585 0.03 ENST00000570054.2
Uncharacterized protein
chr13_+_76378305 0.03 ENST00000526371.1
ENST00000526528.1
LIM domain 7
chr4_+_79475019 0.03 ENST00000508214.1
annexin A3
chr5_+_179135246 0.03 ENST00000508787.1
calnexin
chr3_+_138340067 0.03 ENST00000479848.1
Fas apoptotic inhibitory molecule
chr10_+_114709999 0.03 ENST00000355995.4
ENST00000545257.1
ENST00000543371.1
ENST00000536810.1
ENST00000355717.4
ENST00000538897.1
ENST00000534894.1
transcription factor 7-like 2 (T-cell specific, HMG-box)
chr3_-_196910721 0.03 ENST00000443183.1
discs, large homolog 1 (Drosophila)
chr5_+_145316120 0.03 ENST00000359120.4
SH3 domain containing ring finger 2
chr15_+_81225699 0.03 ENST00000560027.1
KIAA1199
chr3_-_122102065 0.03 ENST00000479899.1
ENST00000291458.5
ENST00000497726.1
coiled-coil domain containing 58
chr16_+_53412368 0.03 ENST00000565189.1
RP11-44F14.2
chr9_+_96846740 0.03 ENST00000288976.3
protein tyrosine phosphatase domain containing 1
chr10_-_31146615 0.03 ENST00000444692.2
zinc finger protein 438
chrX_-_13835461 0.03 ENST00000316715.4
ENST00000356942.5
glycoprotein M6B
chr10_+_94590910 0.03 ENST00000371547.4
exocyst complex component 6
chr2_-_203735586 0.03 ENST00000454326.1
ENST00000432273.1
ENST00000450143.1
ENST00000411681.1
islet cell autoantigen 1,69kDa-like
chr6_+_12008986 0.03 ENST00000491710.1
human immunodeficiency virus type I enhancer binding protein 1
chr3_+_107243204 0.03 ENST00000456817.1
ENST00000458458.1
bobby sox homolog (Drosophila)
chr1_+_100810575 0.03 ENST00000542213.1
cell division cycle 14A
chr3_-_51533966 0.03 ENST00000504652.1
Vpr (HIV-1) binding protein
chr4_+_159131630 0.03 ENST00000504569.1
ENST00000509278.1
ENST00000514558.1
ENST00000503200.1
transmembrane protein 144
chr4_-_85771168 0.03 ENST00000514071.1
WD repeat and FYVE domain containing 3
chrX_-_10645724 0.03 ENST00000413894.1
midline 1 (Opitz/BBB syndrome)
chr10_-_75226166 0.03 ENST00000544628.1
protein phosphatase 3, catalytic subunit, beta isozyme
chr9_+_2159850 0.03 ENST00000416751.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr4_+_41540160 0.03 ENST00000503057.1
ENST00000511496.1
LIM and calponin homology domains 1
chr15_+_55611401 0.03 ENST00000566999.1
phosphatidylinositol glycan anchor biosynthesis, class B
chr12_+_510742 0.03 ENST00000239830.4
coiled-coil domain containing 77
chr6_+_76311636 0.03 ENST00000327284.8
SUMO1/sentrin specific peptidase 6
chr4_+_95972822 0.03 ENST00000509540.1
ENST00000440890.2
bone morphogenetic protein receptor, type IB
chr4_+_26344754 0.02 ENST00000515573.1
recombination signal binding protein for immunoglobulin kappa J region
chr14_+_20215587 0.02 ENST00000331723.1
olfactory receptor, family 4, subfamily Q, member 3
chr3_-_127541194 0.02 ENST00000453507.2
monoglyceride lipase
chr7_-_80548493 0.02 ENST00000536800.1
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr12_-_71551652 0.02 ENST00000546561.1
tetraspanin 8
chr9_-_16705069 0.02 ENST00000471301.2
basonuclin 2
chr6_+_127898312 0.02 ENST00000329722.7
chromosome 6 open reading frame 58
chr11_-_74204692 0.02 ENST00000528085.1
lipoyl(octanoyl) transferase 2 (putative)
chr1_+_196621156 0.02 ENST00000359637.2
complement factor H
chr4_+_74301880 0.02 ENST00000395792.2
ENST00000226359.2
alpha-fetoprotein
chr17_-_63822563 0.02 ENST00000317442.8
centrosomal protein 112kDa
chr13_+_113760098 0.02 ENST00000346342.3
ENST00000541084.1
ENST00000375581.3
coagulation factor VII (serum prothrombin conversion accelerator)
chr1_-_150738261 0.02 ENST00000448301.2
ENST00000368985.3
cathepsin S
chr10_-_51958906 0.02 ENST00000489640.1
N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
chr6_-_151773232 0.02 ENST00000444024.1
ENST00000367303.4
required for meiotic nuclear division 1 homolog (S. cerevisiae)
chr5_+_40841410 0.02 ENST00000381677.3
caspase recruitment domain family, member 6
chr4_+_55095428 0.02 ENST00000508170.1
ENST00000512143.1
platelet-derived growth factor receptor, alpha polypeptide
chr14_-_21994525 0.02 ENST00000538754.1
spalt-like transcription factor 2
chr3_+_138340049 0.02 ENST00000464668.1
Fas apoptotic inhibitory molecule
chr12_+_110940005 0.02 ENST00000409246.1
ENST00000392672.4
ENST00000409300.1
ENST00000409425.1
RAD9 homolog B (S. pombe)
chr3_+_107364683 0.02 ENST00000413213.1
bobby sox homolog (Drosophila)
chr1_-_220219775 0.02 ENST00000609181.1
glutamyl-prolyl-tRNA synthetase
chr10_-_21661870 0.02 ENST00000433460.1
RP11-275N1.1
chrY_+_15418467 0.02 ENST00000595988.1
Uncharacterized protein
chr8_+_67104323 0.02 ENST00000518412.1
ENST00000518035.1
ENST00000517725.1
long intergenic non-protein coding RNA 967
chr1_+_207943667 0.02 ENST00000462968.2
CD46 molecule, complement regulatory protein
chr4_-_89744365 0.02 ENST00000513837.1
ENST00000503556.1
family with sequence similarity 13, member A
chr1_+_81001398 0.02 ENST00000418041.1
ENST00000443104.1
RP5-887A10.1
chr3_+_141103634 0.02 ENST00000507722.1
zinc finger and BTB domain containing 38
chr10_-_36812323 0.02 ENST00000543053.1
nicotinamide phosphoribosyltransferase-like
chr12_+_32655110 0.02 ENST00000546442.1
ENST00000583694.1
FYVE, RhoGEF and PH domain containing 4
chr1_-_150980828 0.02 ENST00000361936.5
ENST00000361738.6
family with sequence similarity 63, member A
chr12_-_10978957 0.02 ENST00000240619.2
taste receptor, type 2, member 10
chr2_+_135596180 0.02 ENST00000283054.4
ENST00000392928.1
aminocarboxymuconate semialdehyde decarboxylase
chr2_-_99917639 0.02 ENST00000308528.4
lysozyme G-like 1
chr7_-_120498357 0.02 ENST00000415871.1
ENST00000222747.3
ENST00000430985.1
tetraspanin 12
chr18_+_3466248 0.02 ENST00000581029.1
ENST00000581442.1
ENST00000579007.1
RP11-838N2.4
chr6_+_145118873 0.02 ENST00000432686.1
ENST00000417142.1
utrophin
chr10_-_95462265 0.02 ENST00000536233.1
ENST00000359204.4
ENST00000371430.2
ENST00000394100.2
fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
chr1_+_196621002 0.02 ENST00000367429.4
ENST00000439155.2
complement factor H
chr2_+_109204743 0.02 ENST00000332345.6
LIM and senescent cell antigen-like domains 1
chr2_+_232575168 0.02 ENST00000440384.1
prothymosin, alpha
chr9_-_116065551 0.02 ENST00000297894.5
ring finger protein 183
chr5_-_75008244 0.02 ENST00000510798.1
ENST00000446329.2
POC5 centriolar protein
chr12_+_14572070 0.02 ENST00000545769.1
ENST00000428217.2
ENST00000396279.2
ENST00000542514.1
ENST00000536279.1
activating transcription factor 7 interacting protein
chr10_+_32856764 0.02 ENST00000375030.2
ENST00000375028.3
Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
chr4_-_74088800 0.02 ENST00000509867.2
ankyrin repeat domain 17
chr2_+_172543919 0.02 ENST00000452242.1
ENST00000340296.4
dynein, cytoplasmic 1, intermediate chain 2
chr16_+_12059091 0.02 ENST00000562385.1
tumor necrosis factor receptor superfamily, member 17
chr5_+_158737824 0.02 ENST00000521472.1
AC008697.1
chr15_+_59730348 0.02 ENST00000288228.5
ENST00000559628.1
ENST00000557914.1
ENST00000560474.1
family with sequence similarity 81, member A
chr14_+_56127960 0.02 ENST00000553624.1
kinectin 1 (kinesin receptor)
chr4_-_123542224 0.02 ENST00000264497.3
interleukin 21
chr14_-_34420259 0.02 ENST00000250457.3
ENST00000547327.2
egl-9 family hypoxia-inducible factor 3
chr5_-_87516448 0.02 ENST00000511218.1
transmembrane protein 161B
chr4_+_96012585 0.02 ENST00000502683.1
bone morphogenetic protein receptor, type IB
chr14_+_56078695 0.02 ENST00000416613.1
kinectin 1 (kinesin receptor)
chr15_+_23810853 0.02 ENST00000568252.1
makorin ring finger protein 3
chr8_+_107593198 0.02 ENST00000517686.1
oxidation resistance 1
chr13_-_41240717 0.02 ENST00000379561.5
forkhead box O1
chr7_-_45957011 0.02 ENST00000417621.1
insulin-like growth factor binding protein 3
chr20_+_16729003 0.02 ENST00000246081.2
otoraplin
chr3_+_171561127 0.02 ENST00000334567.5
ENST00000450693.1
transmembrane protein 212
chr10_+_94594351 0.02 ENST00000371552.4
exocyst complex component 6
chr2_-_151395525 0.02 ENST00000439275.1
Rho family GTPase 3
chr4_-_143227088 0.02 ENST00000511838.1
inositol polyphosphate-4-phosphatase, type II, 105kDa
chrX_-_99987088 0.02 ENST00000372981.1
ENST00000263033.5
synaptotagmin-like 4
chr5_-_39270725 0.02 ENST00000512138.1
ENST00000512982.1
ENST00000540520.1
FYN binding protein
chr7_-_92777606 0.02 ENST00000437805.1
ENST00000446959.1
ENST00000439952.1
ENST00000414791.1
ENST00000446033.1
ENST00000411955.1
ENST00000318238.4
sterile alpha motif domain containing 9-like
chr1_-_198906528 0.02 ENST00000432296.1
MIR181A1 host gene (non-protein coding)
chr3_+_99357319 0.02 ENST00000452013.1
ENST00000261037.3
ENST00000273342.4
collagen, type VIII, alpha 1
chr1_-_59165763 0.02 ENST00000472487.1
Myb-like, SWIRM and MPN domains 1
chr13_+_73629107 0.02 ENST00000539231.1
Kruppel-like factor 5 (intestinal)
chr2_+_136343943 0.02 ENST00000409606.1
R3H domain containing 1
chr1_+_196743943 0.02 ENST00000471440.2
ENST00000391985.3
complement factor H-related 3
chr3_+_136676707 0.02 ENST00000329582.4
interleukin 20 receptor beta
chr14_-_90085458 0.02 ENST00000345097.4
ENST00000555855.1
ENST00000555353.1
forkhead box N3
chr15_-_40401062 0.02 ENST00000354670.4
ENST00000559701.1
ENST00000557870.1
ENST00000558774.1
Bcl2 modifying factor
chr5_-_13944652 0.02 ENST00000265104.4
dynein, axonemal, heavy chain 5
chr1_-_115124257 0.02 ENST00000369541.3
breast carcinoma amplified sequence 2
chr1_+_202431859 0.02 ENST00000391959.3
ENST00000367270.4
protein phosphatase 1, regulatory subunit 12B
chr4_-_175204765 0.02 ENST00000513696.1
ENST00000503293.1
F-box protein 8
chr13_-_81801115 0.02 ENST00000567258.1
long intergenic non-protein coding RNA 564

Network of associatons between targets according to the STRING database.

First level regulatory network of HMGA1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.0 0.1 GO:0098939 dendritic transport of mitochondrion(GO:0098939) anterograde dendritic transport of mitochondrion(GO:0098972)
0.0 0.1 GO:0097156 fasciculation of motor neuron axon(GO:0097156)
0.0 0.1 GO:0006572 tyrosine catabolic process(GO:0006572)
0.0 0.1 GO:0048625 myoblast fate commitment(GO:0048625)
0.0 0.0 GO:1903676 regulation of cap-dependent translational initiation(GO:1903674) positive regulation of cap-dependent translational initiation(GO:1903676)
0.0 0.0 GO:2000097 negative regulation of lipoprotein oxidation(GO:0034443) regulation of smooth muscle cell-matrix adhesion(GO:2000097)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0005577 fibrinogen complex(GO:0005577)
0.0 0.1 GO:0070369 beta-catenin-TCF7L2 complex(GO:0070369) beta-catenin-TCF complex(GO:1990907)
0.0 0.1 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME COMMON PATHWAY Genes involved in Common Pathway