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A549 cells infected with IAV Analysis Results (GEO series: GSE147507)

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Results for SHOX

Z-value: 0.60

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Transcription factors associated with SHOX

Gene Symbol Gene ID Gene Info
SHOX
ENSG00000185960.8 short stature homeobox
SHOX
ENSGR0000185960.8 short stature homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SHOXhg19_v2_chrX_+_591524_5915420.851.5e-01Click!

Activity profile of SHOX motif

Sorted Z-values of SHOX motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_167191814 0.56 ENST00000466903.1
ENST00000264677.4
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr9_-_3469181 0.40 ENST00000366116.2
AL365202.1
Uncharacterized protein
chr7_-_99716914 0.39 ENST00000431404.2
TAF6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr3_-_178103144 0.39 ENST00000417383.1
ENST00000418585.1
ENST00000411727.1
ENST00000439810.1
RP11-33A14.1
RP11-33A14.1
chr5_+_136070614 0.36 ENST00000502421.1
CTB-1I21.1
CTB-1I21.1
chr12_+_52695617 0.35 ENST00000293525.5
KRT86
keratin 86
chr17_-_46690839 0.31 ENST00000498634.2
HOXB8
homeobox B8
chr5_-_56778635 0.30 ENST00000423391.1
ACTBL2
actin, beta-like 2
chr6_+_155538093 0.30 ENST00000462408.2
TIAM2
T-cell lymphoma invasion and metastasis 2
chr2_+_162272605 0.27 ENST00000389554.3
TBR1
T-box, brain, 1
chr2_-_99871570 0.26 ENST00000333017.2
ENST00000409679.1
ENST00000423306.1
LYG2
lysozyme G-like 2
chr3_-_27764190 0.24 ENST00000537516.1
EOMES
eomesodermin
chr11_+_35222629 0.23 ENST00000526553.1
CD44
CD44 molecule (Indian blood group)
chr17_-_19015945 0.23 ENST00000573866.2
SNORD3D
small nucleolar RNA, C/D box 3D
chr12_-_89746173 0.22 ENST00000308385.6
DUSP6
dual specificity phosphatase 6
chr12_-_89746264 0.22 ENST00000548755.1
DUSP6
dual specificity phosphatase 6
chr5_+_101569696 0.22 ENST00000597120.1
AC008948.1
AC008948.1
chr6_-_39693111 0.20 ENST00000373215.3
ENST00000538893.1
ENST00000287152.7
ENST00000373216.3
KIF6
kinesin family member 6
chr14_-_36988882 0.19 ENST00000498187.2
NKX2-1
NK2 homeobox 1
chr10_+_35484793 0.19 ENST00000488741.1
ENST00000474931.1
ENST00000468236.1
ENST00000344351.5
ENST00000490511.1
CREM
cAMP responsive element modulator
chr12_+_78359999 0.18 ENST00000550503.1
NAV3
neuron navigator 3
chr7_-_14026063 0.18 ENST00000443608.1
ENST00000438956.1
ETV1
ets variant 1
chr19_+_48949087 0.18 ENST00000598711.1
GRWD1
glutamate-rich WD repeat containing 1
chr17_+_56833184 0.18 ENST00000308249.2
PPM1E
protein phosphatase, Mg2+/Mn2+ dependent, 1E
chr19_-_51523412 0.17 ENST00000391805.1
ENST00000599077.1
KLK10
kallikrein-related peptidase 10
chr12_-_10282742 0.17 ENST00000298523.5
ENST00000396484.2
ENST00000310002.4
CLEC7A
C-type lectin domain family 7, member A
chr6_+_4087664 0.16 ENST00000430835.2
C6orf201
chromosome 6 open reading frame 201
chr18_+_57567180 0.16 ENST00000316660.6
ENST00000269518.9
PMAIP1
phorbol-12-myristate-13-acetate-induced protein 1
chr12_-_102591604 0.16 ENST00000329406.4
PMCH
pro-melanin-concentrating hormone
chr13_+_78315295 0.16 ENST00000351546.3
SLAIN1
SLAIN motif family, member 1
chr9_+_82188077 0.16 ENST00000425506.1
TLE4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr2_+_45168875 0.15 ENST00000260653.3
SIX3
SIX homeobox 3
chr1_+_12042015 0.15 ENST00000412236.1
MFN2
mitofusin 2
chr8_+_107738343 0.15 ENST00000521592.1
OXR1
oxidation resistance 1
chr21_+_17909594 0.15 ENST00000441820.1
ENST00000602280.1
LINC00478
long intergenic non-protein coding RNA 478
chr15_+_63188009 0.14 ENST00000557900.1
RP11-1069G10.2
RP11-1069G10.2
chr3_-_98235962 0.14 ENST00000513873.1
CLDND1
claudin domain containing 1
chr2_+_179318295 0.14 ENST00000442710.1
DFNB59
deafness, autosomal recessive 59
chr3_-_108248169 0.14 ENST00000273353.3
MYH15
myosin, heavy chain 15
chr3_-_71777824 0.14 ENST00000469524.1
EIF4E3
eukaryotic translation initiation factor 4E family member 3
chr7_-_14026123 0.14 ENST00000420159.2
ENST00000399357.3
ENST00000403527.1
ETV1
ets variant 1
chr5_+_174151536 0.13 ENST00000239243.6
ENST00000507785.1
MSX2
msh homeobox 2
chr7_+_116660246 0.13 ENST00000434836.1
ENST00000393443.1
ENST00000465133.1
ENST00000477742.1
ENST00000393447.4
ENST00000393444.3
ST7
suppression of tumorigenicity 7
chr1_+_153747746 0.13 ENST00000368661.3
SLC27A3
solute carrier family 27 (fatty acid transporter), member 3
chr3_+_141106643 0.13 ENST00000514251.1
ZBTB38
zinc finger and BTB domain containing 38
chr2_-_190927447 0.13 ENST00000260950.4
MSTN
myostatin
chr7_+_115862858 0.13 ENST00000393481.2
TES
testis derived transcript (3 LIM domains)
chr21_-_35284635 0.13 ENST00000429238.1
AP000304.12
AP000304.12
chr14_-_98444461 0.13 ENST00000499006.2
C14orf64
chromosome 14 open reading frame 64
chr10_+_94451574 0.13 ENST00000492654.2
HHEX
hematopoietically expressed homeobox
chr11_-_31531121 0.12 ENST00000532287.1
ENST00000526776.1
ENST00000534812.1
ENST00000529749.1
ENST00000278200.1
ENST00000530023.1
ENST00000533642.1
IMMP1L
IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
chr11_-_117747434 0.12 ENST00000529335.2
ENST00000530956.1
ENST00000260282.4
FXYD6
FXYD domain containing ion transport regulator 6
chr19_-_53758094 0.12 ENST00000601828.1
ENST00000598513.1
ENST00000599012.1
ENST00000333952.4
ENST00000598806.1
ZNF677
zinc finger protein 677
chr6_+_52535878 0.12 ENST00000211314.4
TMEM14A
transmembrane protein 14A
chr18_-_500692 0.12 ENST00000400256.3
COLEC12
collectin sub-family member 12
chr2_+_66918558 0.12 ENST00000435389.1
ENST00000428590.1
ENST00000412944.1
AC007392.3
AC007392.3
chrX_+_108779004 0.12 ENST00000218004.1
NXT2
nuclear transport factor 2-like export factor 2
chr12_+_49621658 0.12 ENST00000541364.1
TUBA1C
tubulin, alpha 1c
chr8_+_107738240 0.12 ENST00000449762.2
ENST00000297447.6
OXR1
oxidation resistance 1
chr17_+_47448102 0.12 ENST00000576461.1
RP11-81K2.1
Uncharacterized protein
chr4_-_170897045 0.11 ENST00000508313.1
RP11-205M3.3
RP11-205M3.3
chr3_-_180397256 0.11 ENST00000442201.2
CCDC39
coiled-coil domain containing 39
chr9_-_69229650 0.11 ENST00000416428.1
CBWD6
COBW domain containing 6
chr20_+_18447771 0.11 ENST00000377603.4
POLR3F
polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
chr20_+_2276639 0.11 ENST00000381458.5
TGM3
transglutaminase 3
chr5_+_133562095 0.11 ENST00000602919.1
CTD-2410N18.3
CTD-2410N18.3
chr14_-_54425475 0.11 ENST00000559642.1
BMP4
bone morphogenetic protein 4
chr12_-_57328187 0.10 ENST00000293502.1
SDR9C7
short chain dehydrogenase/reductase family 9C, member 7
chr1_-_45956822 0.10 ENST00000372086.3
ENST00000341771.6
TESK2
testis-specific kinase 2
chrX_+_22050546 0.10 ENST00000379374.4
PHEX
phosphate regulating endopeptidase homolog, X-linked
chr3_+_129247479 0.10 ENST00000296271.3
RHO
rhodopsin
chr19_-_14064114 0.10 ENST00000585607.1
ENST00000538517.2
ENST00000587458.1
ENST00000538371.2
PODNL1
podocan-like 1
chr20_+_18488137 0.10 ENST00000450074.1
ENST00000262544.2
ENST00000336714.3
ENST00000377475.3
SEC23B
Sec23 homolog B (S. cerevisiae)
chr19_+_13049413 0.10 ENST00000316448.5
ENST00000588454.1
CALR
calreticulin
chr14_+_101359265 0.10 ENST00000599197.1
AL117190.3
Esophagus cancer-related gene-2 interaction susceptibility protein; Uncharacterized protein
chr1_-_151762943 0.10 ENST00000368825.3
ENST00000368823.1
ENST00000458431.2
ENST00000368827.6
ENST00000368824.3
TDRKH
tudor and KH domain containing
chr4_+_90033968 0.10 ENST00000317005.2
TIGD2
tigger transposable element derived 2
chr2_-_136678123 0.10 ENST00000422708.1
DARS
aspartyl-tRNA synthetase
chr1_+_186265399 0.10 ENST00000367486.3
ENST00000367484.3
ENST00000533951.1
ENST00000367482.4
ENST00000367483.4
ENST00000367485.4
ENST00000445192.2
PRG4
proteoglycan 4
chr6_+_5261225 0.10 ENST00000324331.6
FARS2
phenylalanyl-tRNA synthetase 2, mitochondrial
chr15_+_101420028 0.09 ENST00000557963.1
ENST00000346623.6
ALDH1A3
aldehyde dehydrogenase 1 family, member A3
chr4_-_105416039 0.09 ENST00000394767.2
CXXC4
CXXC finger protein 4
chr1_+_214161854 0.09 ENST00000435016.1
PROX1
prospero homeobox 1
chr8_+_107460147 0.09 ENST00000442977.2
OXR1
oxidation resistance 1
chrX_-_19817869 0.09 ENST00000379698.4
SH3KBP1
SH3-domain kinase binding protein 1
chr2_-_145277569 0.09 ENST00000303660.4
ZEB2
zinc finger E-box binding homeobox 2
chr7_-_44580861 0.09 ENST00000546276.1
ENST00000289547.4
ENST00000381160.3
ENST00000423141.1
NPC1L1
NPC1-like 1
chr7_-_137028534 0.09 ENST00000348225.2
PTN
pleiotrophin
chr1_+_153746683 0.09 ENST00000271857.2
SLC27A3
solute carrier family 27 (fatty acid transporter), member 3
chr16_-_28192360 0.09 ENST00000570033.1
XPO6
exportin 6
chr12_-_52761262 0.09 ENST00000257901.3
KRT85
keratin 85
chr7_-_137028498 0.08 ENST00000393083.2
PTN
pleiotrophin
chr11_+_112041253 0.08 ENST00000532612.1
AP002884.3
AP002884.3
chr1_-_242612779 0.08 ENST00000427495.1
PLD5
phospholipase D family, member 5
chr17_+_18086392 0.08 ENST00000541285.1
ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
chr11_+_128563652 0.08 ENST00000527786.2
FLI1
Fli-1 proto-oncogene, ETS transcription factor
chr17_+_39405939 0.08 ENST00000334109.2
KRTAP9-4
keratin associated protein 9-4
chrX_+_591524 0.08 ENST00000554971.1
ENST00000381575.1
SHOX
short stature homeobox
chr20_+_57414743 0.08 ENST00000313949.7
GNAS
GNAS complex locus
chr1_-_45956868 0.08 ENST00000451835.2
TESK2
testis-specific kinase 2
chr6_-_116833500 0.08 ENST00000356128.4
TRAPPC3L
trafficking protein particle complex 3-like
chr3_+_151591422 0.08 ENST00000362032.5
SUCNR1
succinate receptor 1
chr10_+_115511213 0.08 ENST00000361048.1
PLEKHS1
pleckstrin homology domain containing, family S member 1
chr4_+_40201954 0.08 ENST00000511121.1
RHOH
ras homolog family member H
chr18_-_33709268 0.08 ENST00000269187.5
ENST00000590986.1
ENST00000440549.2
SLC39A6
solute carrier family 39 (zinc transporter), member 6
chr6_-_31107127 0.08 ENST00000259845.4
PSORS1C2
psoriasis susceptibility 1 candidate 2
chr17_+_41363854 0.08 ENST00000588693.1
ENST00000588659.1
ENST00000541594.1
ENST00000536052.1
ENST00000331615.3
TMEM106A
transmembrane protein 106A
chr5_-_96478466 0.08 ENST00000274382.4
LIX1
Lix1 homolog (chicken)
chr21_+_17443434 0.08 ENST00000400178.2
LINC00478
long intergenic non-protein coding RNA 478
chr12_-_56694142 0.08 ENST00000550655.1
ENST00000548567.1
ENST00000551430.2
ENST00000351328.3
CS
citrate synthase
chr12_-_31478428 0.08 ENST00000543615.1
FAM60A
family with sequence similarity 60, member A
chr17_-_48785216 0.08 ENST00000285243.6
ANKRD40
ankyrin repeat domain 40
chr10_+_90660832 0.07 ENST00000371924.1
STAMBPL1
STAM binding protein-like 1
chr19_-_51522955 0.07 ENST00000358789.3
KLK10
kallikrein-related peptidase 10
chrX_+_107288239 0.07 ENST00000217957.5
VSIG1
V-set and immunoglobulin domain containing 1
chr10_-_71169031 0.07 ENST00000373307.1
TACR2
tachykinin receptor 2
chr7_+_138943265 0.07 ENST00000483726.1
UBN2
ubinuclein 2
chr6_+_130339710 0.07 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
L3MBTL3
l(3)mbt-like 3 (Drosophila)
chr3_+_141106458 0.07 ENST00000509883.1
ZBTB38
zinc finger and BTB domain containing 38
chr15_+_36887069 0.07 ENST00000566807.1
ENST00000567389.1
ENST00000562877.1
C15orf41
chromosome 15 open reading frame 41
chr9_+_22646189 0.07 ENST00000436786.1
RP11-399D6.2
RP11-399D6.2
chr1_+_198608146 0.07 ENST00000367376.2
ENST00000352140.3
ENST00000594404.1
ENST00000598951.1
ENST00000530727.1
ENST00000442510.2
ENST00000367367.4
ENST00000348564.6
ENST00000367364.1
ENST00000413409.2
PTPRC
protein tyrosine phosphatase, receptor type, C
chr14_+_67831576 0.07 ENST00000555876.1
EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr2_-_145278475 0.07 ENST00000558170.2
ZEB2
zinc finger E-box binding homeobox 2
chr4_+_146402346 0.07 ENST00000514778.1
ENST00000507594.1
SMAD1
SMAD family member 1
chr15_+_80351977 0.07 ENST00000559157.1
ENST00000561012.1
ENST00000564367.1
ENST00000558494.1
ZFAND6
zinc finger, AN1-type domain 6
chr7_+_135611542 0.07 ENST00000416501.1
AC015987.2
AC015987.2
chr9_-_16728161 0.07 ENST00000603713.1
ENST00000603313.1
BNC2
basonuclin 2
chr12_+_20963647 0.07 ENST00000381545.3
SLCO1B3
solute carrier organic anion transporter family, member 1B3
chr13_+_78315528 0.07 ENST00000496045.1
SLAIN1
SLAIN motif family, member 1
chr3_+_69928256 0.07 ENST00000394355.2
MITF
microphthalmia-associated transcription factor
chr12_-_16759440 0.06 ENST00000537304.1
LMO3
LIM domain only 3 (rhombotin-like 2)
chrX_+_107288197 0.06 ENST00000415430.3
VSIG1
V-set and immunoglobulin domain containing 1
chr1_+_180601139 0.06 ENST00000367590.4
ENST00000367589.3
XPR1
xenotropic and polytropic retrovirus receptor 1
chr7_+_138145076 0.06 ENST00000343526.4
TRIM24
tripartite motif containing 24
chr8_+_117950422 0.06 ENST00000378279.3
AARD
alanine and arginine rich domain containing protein
chr1_+_214161272 0.06 ENST00000498508.2
ENST00000366958.4
PROX1
prospero homeobox 1
chr15_-_55562479 0.06 ENST00000564609.1
RAB27A
RAB27A, member RAS oncogene family
chr1_+_160370344 0.06 ENST00000368061.2
VANGL2
VANGL planar cell polarity protein 2
chr7_+_116502527 0.06 ENST00000361183.3
CAPZA2
capping protein (actin filament) muscle Z-line, alpha 2
chr19_+_30719410 0.06 ENST00000585628.1
ENST00000591488.1
ZNF536
zinc finger protein 536
chr15_+_80351910 0.06 ENST00000261749.6
ENST00000561060.1
ZFAND6
zinc finger, AN1-type domain 6
chr4_+_72204755 0.06 ENST00000512686.1
ENST00000340595.3
SLC4A4
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
chr1_-_224624730 0.06 ENST00000445239.1
WDR26
WD repeat domain 26
chr20_-_45980621 0.06 ENST00000446894.1
ZMYND8
zinc finger, MYND-type containing 8
chr13_+_36050881 0.06 ENST00000537702.1
NBEA
neurobeachin
chr1_-_232651312 0.06 ENST00000262861.4
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr1_-_151762900 0.06 ENST00000440583.2
TDRKH
tudor and KH domain containing
chr12_-_110937351 0.06 ENST00000552130.2
VPS29
vacuolar protein sorting 29 homolog (S. cerevisiae)
chr20_+_55967129 0.06 ENST00000371219.2
RBM38
RNA binding motif protein 38
chr11_-_117748138 0.06 ENST00000527717.1
FXYD6
FXYD domain containing ion transport regulator 6
chr6_-_127780510 0.06 ENST00000487331.2
ENST00000483725.3
KIAA0408
KIAA0408
chr21_+_17443521 0.06 ENST00000456342.1
LINC00478
long intergenic non-protein coding RNA 478
chr6_-_138539627 0.06 ENST00000527246.2
PBOV1
prostate and breast cancer overexpressed 1
chr14_+_32798547 0.06 ENST00000557354.1
ENST00000557102.1
ENST00000557272.1
AKAP6
A kinase (PRKA) anchor protein 6
chr16_+_103816 0.06 ENST00000383018.3
ENST00000417493.1
SNRNP25
small nuclear ribonucleoprotein 25kDa (U11/U12)
chr6_+_26365443 0.06 ENST00000527422.1
ENST00000356386.2
ENST00000396934.3
ENST00000377708.2
ENST00000396948.1
ENST00000508906.2
BTN3A2
butyrophilin, subfamily 3, member A2
chr11_+_123430948 0.06 ENST00000529432.1
ENST00000534764.1
GRAMD1B
GRAM domain containing 1B
chr1_-_101360331 0.05 ENST00000416479.1
ENST00000370113.3
EXTL2
exostosin-like glycosyltransferase 2
chr3_+_156393349 0.05 ENST00000473702.1
TIPARP
TCDD-inducible poly(ADP-ribose) polymerase
chr15_-_55562582 0.05 ENST00000396307.2
RAB27A
RAB27A, member RAS oncogene family
chr1_+_109265033 0.05 ENST00000445274.1
FNDC7
fibronectin type III domain containing 7
chr14_-_54423529 0.05 ENST00000245451.4
ENST00000559087.1
BMP4
bone morphogenetic protein 4
chr18_-_44181442 0.05 ENST00000398722.4
LOXHD1
lipoxygenase homology domains 1
chr2_-_200335983 0.05 ENST00000457245.1
SATB2
SATB homeobox 2
chr12_-_122018346 0.05 ENST00000377069.4
KDM2B
lysine (K)-specific demethylase 2B
chr11_-_111794446 0.05 ENST00000527950.1
CRYAB
crystallin, alpha B
chr11_-_117747607 0.05 ENST00000540359.1
ENST00000539526.1
FXYD6
FXYD domain containing ion transport regulator 6
chr3_-_178984759 0.05 ENST00000349697.2
ENST00000497599.1
KCNMB3
potassium large conductance calcium-activated channel, subfamily M beta member 3
chr12_-_10282836 0.05 ENST00000304084.8
ENST00000353231.5
ENST00000525605.1
CLEC7A
C-type lectin domain family 7, member A
chr4_+_95916947 0.05 ENST00000506363.1
BMPR1B
bone morphogenetic protein receptor, type IB
chr1_+_206557366 0.05 ENST00000414007.1
ENST00000419187.2
SRGAP2
SLIT-ROBO Rho GTPase activating protein 2
chr12_-_112123524 0.05 ENST00000327551.6
BRAP
BRCA1 associated protein
chr15_+_48483736 0.05 ENST00000417307.2
ENST00000559641.1
CTXN2
SLC12A1
cortexin 2
solute carrier family 12 (sodium/potassium/chloride transporter), member 1
chrX_-_110655306 0.05 ENST00000371993.2
DCX
doublecortin
chr21_+_17442799 0.05 ENST00000602580.1
ENST00000458468.1
ENST00000602935.1
LINC00478
long intergenic non-protein coding RNA 478
chr2_-_151395525 0.05 ENST00000439275.1
RND3
Rho family GTPase 3
chr7_+_77428149 0.05 ENST00000415251.2
ENST00000275575.7
PHTF2
putative homeodomain transcription factor 2
chr17_-_46716647 0.05 ENST00000608940.1
RP11-357H14.17
RP11-357H14.17
chr11_-_117747327 0.05 ENST00000584230.1
ENST00000527429.1
ENST00000584394.1
ENST00000532984.1
FXYD6
FXYD6-FXYD2
FXYD domain containing ion transport regulator 6
FXYD6-FXYD2 readthrough
chr7_+_141408153 0.05 ENST00000397541.2
WEE2
WEE1 homolog 2 (S. pombe)
chr21_-_35899113 0.05 ENST00000492600.1
ENST00000481448.1
ENST00000381132.2
RCAN1
regulator of calcineurin 1
chr17_+_59489112 0.05 ENST00000335108.2
C17orf82
chromosome 17 open reading frame 82
chr14_-_64194745 0.05 ENST00000247225.6
SGPP1
sphingosine-1-phosphate phosphatase 1
chr9_-_123639445 0.05 ENST00000312189.6
PHF19
PHD finger protein 19
chr7_-_14028488 0.05 ENST00000405358.4
ETV1
ets variant 1
chr8_-_17533838 0.05 ENST00000400046.1
MTUS1
microtubule associated tumor suppressor 1
chr12_-_28122980 0.05 ENST00000395868.3
ENST00000534890.1
PTHLH
parathyroid hormone-like hormone
chr19_+_54641444 0.05 ENST00000221232.5
ENST00000358389.3
CNOT3
CCR4-NOT transcription complex, subunit 3
chr6_+_55192267 0.05 ENST00000340465.2
GFRAL
GDNF family receptor alpha like
chr11_+_24518723 0.05 ENST00000336930.6
ENST00000529015.1
ENST00000533227.1
LUZP2
leucine zipper protein 2
chr4_-_36245561 0.05 ENST00000506189.1
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr12_-_88974236 0.05 ENST00000228280.5
ENST00000552044.1
ENST00000357116.4
KITLG
KIT ligand
chr14_+_38065052 0.04 ENST00000556845.1
TTC6
tetratricopeptide repeat domain 6
chr12_-_58135903 0.04 ENST00000257897.3
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr12_+_7014064 0.04 ENST00000443597.2
LRRC23
leucine rich repeat containing 23
chr2_-_74618907 0.04 ENST00000421392.1
ENST00000437375.1
DCTN1
dynactin 1
chr11_+_75526212 0.04 ENST00000356136.3
UVRAG
UV radiation resistance associated
chr14_+_74815116 0.04 ENST00000256362.4
VRTN
vertebrae development associated
chr6_+_153552455 0.04 ENST00000392385.2
AL590867.1
Uncharacterized protein; cDNA FLJ59044, highly similar to LINE-1 reverse transcriptase homolog

Network of associatons between targets according to the STRING database.

First level regulatory network of SHOX

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0042663 regulation of endodermal cell fate specification(GO:0042663)
0.1 0.1 GO:0061010 gall bladder development(GO:0061010)
0.1 0.2 GO:1904395 positive regulation of skeletal muscle acetylcholine-gated channel clustering(GO:1904395) negative regulation of neuromuscular junction development(GO:1904397)
0.1 0.2 GO:0046619 optic placode formation involved in camera-type eye formation(GO:0046619)
0.0 0.1 GO:0014016 neuroblast differentiation(GO:0014016) forebrain dorsal/ventral pattern formation(GO:0021798)
0.0 0.1 GO:0060166 olfactory pit development(GO:0060166)
0.0 0.1 GO:0051795 positive regulation of catagen(GO:0051795) activation of meiosis(GO:0090427)
0.0 0.3 GO:0021764 amygdala development(GO:0021764)
0.0 0.1 GO:1902725 negative regulation of skeletal muscle cell proliferation(GO:0014859) negative regulation of skeletal muscle satellite cell proliferation(GO:1902723) negative regulation of satellite cell differentiation(GO:1902725)
0.0 0.3 GO:0001714 endodermal cell fate specification(GO:0001714)
0.0 0.3 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.2 GO:0021759 globus pallidus development(GO:0021759)
0.0 0.2 GO:0061151 apoptotic process involved in endocardial cushion morphogenesis(GO:0003277) intermediate mesoderm morphogenesis(GO:0048390) intermediate mesoderm formation(GO:0048391) intermediate mesodermal cell differentiation(GO:0048392) regulation of cardiac muscle fiber development(GO:0055018) positive regulation of cardiac muscle fiber development(GO:0055020) bud dilation involved in lung branching(GO:0060503) BMP signaling pathway involved in ureter morphogenesis(GO:0061149) renal system segmentation(GO:0061150) BMP signaling pathway involved in renal system segmentation(GO:0061151) pulmonary artery endothelial tube morphogenesis(GO:0061155) regulation of transcription from RNA polymerase II promoter involved in mesonephros development(GO:0061216) BMP signaling pathway involved in nephric duct formation(GO:0071893) negative regulation of branch elongation involved in ureteric bud branching(GO:0072096) negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway(GO:0072097) anterior/posterior pattern specification involved in ureteric bud development(GO:0072099) specification of ureteric bud anterior/posterior symmetry(GO:0072100) specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway(GO:0072101) ureter epithelial cell differentiation(GO:0072192) negative regulation of mesenchymal cell proliferation involved in ureter development(GO:0072200) positive regulation of cell proliferation involved in outflow tract morphogenesis(GO:1901964) cardiac jelly development(GO:1905072) regulation of metanephric S-shaped body morphogenesis(GO:2000004) negative regulation of metanephric S-shaped body morphogenesis(GO:2000005) regulation of metanephric comma-shaped body morphogenesis(GO:2000006) negative regulation of metanephric comma-shaped body morphogenesis(GO:2000007)
0.0 0.2 GO:1900623 regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625)
0.0 0.1 GO:0006422 aspartyl-tRNA aminoacylation(GO:0006422)
0.0 0.1 GO:0060488 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.0 0.1 GO:1903566 positive regulation of protein localization to cilium(GO:1903566)
0.0 0.1 GO:0035469 determination of pancreatic left/right asymmetry(GO:0035469)
0.0 0.1 GO:0033685 negative regulation of luteinizing hormone secretion(GO:0033685)
0.0 0.1 GO:0045229 cell envelope organization(GO:0043163) external encapsulating structure organization(GO:0045229)
0.0 0.4 GO:0007638 mechanosensory behavior(GO:0007638)
0.0 0.2 GO:1903056 mammillary body development(GO:0021767) mammillary axonal complex development(GO:0061373) positive regulation of lens fiber cell differentiation(GO:1902748) regulation of melanosome organization(GO:1903056)
0.0 0.1 GO:1904383 response to sodium phosphate(GO:1904383)
0.0 0.1 GO:1990737 response to manganese-induced endoplasmic reticulum stress(GO:1990737)
0.0 0.1 GO:0035553 oxidative RNA demethylation(GO:0035513) oxidative single-stranded RNA demethylation(GO:0035553)
0.0 0.3 GO:0009756 carbohydrate mediated signaling(GO:0009756)
0.0 0.4 GO:0071447 cellular response to hydroperoxide(GO:0071447)
0.0 0.0 GO:0033023 mast cell homeostasis(GO:0033023) mast cell apoptotic process(GO:0033024) regulation of mast cell apoptotic process(GO:0033025) regulation of mast cell proliferation(GO:0070666) positive regulation of mast cell proliferation(GO:0070668)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.1 GO:0007352 zygotic specification of dorsal/ventral axis(GO:0007352)
0.0 0.1 GO:0003363 lamellipodium assembly involved in ameboidal cell migration(GO:0003363) extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration(GO:0021816)
0.0 0.0 GO:0021529 spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530)
0.0 0.3 GO:0007625 grooming behavior(GO:0007625)
0.0 0.1 GO:0002501 MHC protein complex assembly(GO:0002396) peptide antigen assembly with MHC protein complex(GO:0002501)
0.0 0.1 GO:2000324 positive regulation of glucocorticoid receptor signaling pathway(GO:2000324)
0.0 0.1 GO:0002378 immunoglobulin biosynthetic process(GO:0002378) hematopoietic stem cell migration(GO:0035701)
0.0 0.1 GO:0018298 protein-chromophore linkage(GO:0018298)
0.0 0.0 GO:0046462 monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0 0.2 GO:1902237 positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway(GO:1902237)
0.0 0.0 GO:0003292 cardiac septum cell differentiation(GO:0003292) atrioventricular node cell differentiation(GO:0060922) atrioventricular node cell development(GO:0060928)
0.0 0.1 GO:0061734 parkin-mediated mitophagy in response to mitochondrial depolarization(GO:0061734)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0071547 piP-body(GO:0071547)
0.0 0.2 GO:0035692 macrophage migration inhibitory factor receptor complex(GO:0035692)
0.0 0.1 GO:0042720 mitochondrial inner membrane peptidase complex(GO:0042720)
0.0 0.1 GO:0043614 multi-eIF complex(GO:0043614) translation preinitiation complex(GO:0070993)
0.0 0.1 GO:0060187 cell pole(GO:0060187)
0.0 0.3 GO:0033276 transcription factor TFTC complex(GO:0033276)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.1 GO:0071953 elastic fiber(GO:0071953)
0.0 0.1 GO:0042824 MHC class I peptide loading complex(GO:0042824)
0.0 0.1 GO:0005726 perichromatin fibrils(GO:0005726)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0035373 chondroitin sulfate proteoglycan binding(GO:0035373)
0.0 0.3 GO:0003796 lysozyme activity(GO:0003796)
0.0 0.5 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.2 GO:0050692 DBD domain binding(GO:0050692)
0.0 0.1 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 0.3 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)
0.0 0.1 GO:0008511 sodium:potassium:chloride symporter activity(GO:0008511)
0.0 0.1 GO:0035515 oxidative RNA demethylase activity(GO:0035515)
0.0 0.0 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 0.1 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.1 GO:0004815 aspartate-tRNA ligase activity(GO:0004815)
0.0 0.1 GO:0008020 G-protein coupled photoreceptor activity(GO:0008020)
0.0 0.3 GO:0008329 signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.1 GO:0034056 estrogen response element binding(GO:0034056)
0.0 0.1 GO:0001849 complement component C1q binding(GO:0001849)
0.0 0.2 GO:0070700 BMP receptor binding(GO:0070700)
0.0 0.2 GO:0044213 intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) intronic transcription regulatory region DNA binding(GO:0044213)
0.0 0.0 GO:0004803 transposase activity(GO:0004803)
0.0 0.2 GO:0008140 cAMP response element binding protein binding(GO:0008140)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME ERKS ARE INACTIVATED Genes involved in ERKs are inactivated
0.0 0.1 REACTOME OPSINS Genes involved in Opsins
0.0 0.2 REACTOME HYALURONAN UPTAKE AND DEGRADATION Genes involved in Hyaluronan uptake and degradation