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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for AACGGAA

Z-value: 0.32

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miRNA associated with seed AACGGAA

NamemiRBASE accession
hsa-miR-191-5p
MIMAT0000440

Activity profile of AACGGAA motif

Sorted Z-values of AACGGAA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chrX_-_41782249 0.13 ENST00000442742.2
ENST00000421587.2
ENST00000378166.4
ENST00000318588.9
ENST00000361962.4
CASK
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chr7_-_108096822 0.13 ENST00000379028.3
ENST00000413765.2
ENST00000379022.4
NRCAM
neuronal cell adhesion molecule
chr10_-_81205373 0.10 ENST00000372336.3
ZCCHC24
zinc finger, CCHC domain containing 24
chr1_+_61547894 0.10 ENST00000403491.3
NFIA
nuclear factor I/A
chr17_-_7232585 0.09 ENST00000571887.1
ENST00000315614.7
ENST00000399464.2
ENST00000570460.1
NEURL4
neuralized E3 ubiquitin protein ligase 4
chr17_-_46623441 0.08 ENST00000330070.4
HOXB2
homeobox B2
chr2_-_208634287 0.06 ENST00000295417.3
FZD5
frizzled family receptor 5
chr1_-_17766198 0.05 ENST00000375436.4
RCC2
regulator of chromosome condensation 2
chr5_+_149887672 0.05 ENST00000261797.6
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chrX_-_109561294 0.05 ENST00000372059.2
ENST00000262844.5
AMMECR1
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr19_+_3359561 0.04 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
NFIC
nuclear factor I/C (CCAAT-binding transcription factor)
chr2_+_27193480 0.04 ENST00000233121.2
ENST00000405074.3
MAPRE3
microtubule-associated protein, RP/EB family, member 3
chr1_+_33722080 0.03 ENST00000483388.1
ENST00000539719.1
ZNF362
zinc finger protein 362
chr7_-_92463210 0.03 ENST00000265734.4
CDK6
cyclin-dependent kinase 6
chr11_-_67980744 0.03 ENST00000401547.2
ENST00000453170.1
ENST00000304363.4
SUV420H1
suppressor of variegation 4-20 homolog 1 (Drosophila)
chr12_-_117319236 0.03 ENST00000257572.5
HRK
harakiri, BCL2 interacting protein (contains only BH3 domain)
chr7_-_17980091 0.02 ENST00000409389.1
ENST00000409604.1
ENST00000428135.3
SNX13
sorting nexin 13
chr18_+_32558208 0.02 ENST00000436190.2
MAPRE2
microtubule-associated protein, RP/EB family, member 2
chr9_+_133454943 0.01 ENST00000319725.9
FUBP3
far upstream element (FUSE) binding protein 3
chr3_-_18466787 0.01 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr2_-_128643496 0.01 ENST00000272647.5
AMMECR1L
AMMECR1-like
chr1_-_19283163 0.00 ENST00000455833.2
IFFO2
intermediate filament family orphan 2
chr16_-_4897266 0.00 ENST00000591451.1
ENST00000436648.5
ENST00000381983.3
ENST00000588297.1
ENST00000321919.9
GLYR1
glyoxylate reductase 1 homolog (Arabidopsis)
chr14_+_36295504 0.00 ENST00000216807.7
BRMS1L
breast cancer metastasis-suppressor 1-like
chr7_-_74867509 0.00 ENST00000426327.3
GATSL2
GATS protein-like 2
chr9_-_16870704 0.00 ENST00000380672.4
ENST00000380667.2
ENST00000380666.2
ENST00000486514.1
BNC2
basonuclin 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AACGGAA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0021569 rhombomere 3 development(GO:0021569)
0.0 0.1 GO:0060061 Spemann organizer formation(GO:0060061)
0.0 0.1 GO:0072356 chromosome passenger complex localization to kinetochore(GO:0072356)
0.0 0.0 GO:1903033 regulation of microtubule plus-end binding(GO:1903031) positive regulation of microtubule plus-end binding(GO:1903033)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0098770 FBXO family protein binding(GO:0098770)