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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for AAGGUGC

Z-value: 0.45

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miRNA associated with seed AAGGUGC

NamemiRBASE accession
hsa-miR-18a-5p
MIMAT0000072
hsa-miR-18b-5p
MIMAT0001412
hsa-miR-4735-3p
MIMAT0019861

Activity profile of AAGGUGC motif

Sorted Z-values of AAGGUGC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_123603137 0.29 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
MYLK
myosin light chain kinase
chr5_-_180288248 0.28 ENST00000512132.1
ENST00000506439.1
ENST00000502412.1
ENST00000359141.6
ZFP62
ZFP62 zinc finger protein
chr10_-_119806085 0.28 ENST00000355624.3
RAB11FIP2
RAB11 family interacting protein 2 (class I)
chr5_+_78532003 0.27 ENST00000396137.4
JMY
junction mediating and regulatory protein, p53 cofactor
chr5_-_142783175 0.27 ENST00000231509.3
ENST00000394464.2
NR3C1
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
chr16_+_28996114 0.20 ENST00000395461.3
LAT
linker for activation of T cells
chr6_-_132272504 0.20 ENST00000367976.3
CTGF
connective tissue growth factor
chr3_+_105085734 0.19 ENST00000306107.5
ALCAM
activated leukocyte cell adhesion molecule
chr3_+_187930719 0.18 ENST00000312675.4
LPP
LIM domain containing preferred translocation partner in lipoma
chr6_-_111136513 0.18 ENST00000368911.3
CDK19
cyclin-dependent kinase 19
chr9_+_118916082 0.16 ENST00000328252.3
PAPPA
pregnancy-associated plasma protein A, pappalysin 1
chr10_+_111767720 0.16 ENST00000356080.4
ENST00000277900.8
ADD3
adducin 3 (gamma)
chr6_+_134274322 0.16 ENST00000367871.1
ENST00000237264.4
TBPL1
TBP-like 1
chr5_-_73937244 0.16 ENST00000302351.4
ENST00000510316.1
ENST00000508331.1
ENC1
ectodermal-neural cortex 1 (with BTB domain)
chr5_+_31193847 0.15 ENST00000514738.1
ENST00000265071.2
CDH6
cadherin 6, type 2, K-cadherin (fetal kidney)
chr21_-_18985158 0.15 ENST00000339775.6
BTG3
BTG family, member 3
chr9_-_99180597 0.14 ENST00000375256.4
ZNF367
zinc finger protein 367
chr15_+_39873268 0.13 ENST00000397591.2
ENST00000260356.5
THBS1
thrombospondin 1
chr3_+_37903432 0.13 ENST00000443503.2
CTDSPL
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
chr5_-_171711061 0.13 ENST00000393792.2
UBTD2
ubiquitin domain containing 2
chr17_+_68165657 0.13 ENST00000243457.3
KCNJ2
potassium inwardly-rectifying channel, subfamily J, member 2
chr9_+_91003271 0.13 ENST00000375859.3
ENST00000541629.1
SPIN1
spindlin 1
chrX_+_150565653 0.12 ENST00000330374.6
VMA21
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr11_-_72853091 0.12 ENST00000311172.7
ENST00000409314.1
FCHSD2
FCH and double SH3 domains 2
chr2_-_153032484 0.11 ENST00000263904.4
STAM2
signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr12_+_12764773 0.11 ENST00000228865.2
CREBL2
cAMP responsive element binding protein-like 2
chr2_-_26101374 0.11 ENST00000435504.4
ASXL2
additional sex combs like 2 (Drosophila)
chr20_+_34700333 0.10 ENST00000441639.1
EPB41L1
erythrocyte membrane protein band 4.1-like 1
chr17_-_7382834 0.10 ENST00000380599.4
ZBTB4
zinc finger and BTB domain containing 4
chr3_+_152017181 0.09 ENST00000498502.1
ENST00000324196.5
ENST00000545754.1
ENST00000357472.3
MBNL1
muscleblind-like splicing regulator 1
chr4_-_125633876 0.09 ENST00000504087.1
ENST00000515641.1
ANKRD50
ankyrin repeat domain 50
chr3_+_141205852 0.09 ENST00000286364.3
ENST00000452898.1
RASA2
RAS p21 protein activator 2
chr1_+_87794150 0.09 ENST00000370544.5
LMO4
LIM domain only 4
chr18_+_20513782 0.09 ENST00000399722.2
ENST00000399725.2
ENST00000399721.2
ENST00000583594.1
RBBP8
retinoblastoma binding protein 8
chr9_-_123639600 0.09 ENST00000373896.3
PHF19
PHD finger protein 19
chr5_+_102594403 0.08 ENST00000319933.2
C5orf30
chromosome 5 open reading frame 30
chr13_-_77601282 0.08 ENST00000355619.5
FBXL3
F-box and leucine-rich repeat protein 3
chr20_+_56884752 0.08 ENST00000244040.3
RAB22A
RAB22A, member RAS oncogene family
chr12_-_44200052 0.08 ENST00000548315.1
ENST00000552521.1
ENST00000546662.1
ENST00000548403.1
ENST00000546506.1
TWF1
twinfilin actin-binding protein 1
chr3_-_113465065 0.08 ENST00000497255.1
ENST00000478020.1
ENST00000240922.3
ENST00000493900.1
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr8_+_142402089 0.08 ENST00000521578.1
ENST00000520105.1
ENST00000523147.1
PTP4A3
protein tyrosine phosphatase type IVA, member 3
chr18_-_29522989 0.08 ENST00000582539.1
ENST00000283351.4
ENST00000582513.1
TRAPPC8
trafficking protein particle complex 8
chr1_+_62208091 0.07 ENST00000316485.6
ENST00000371158.2
INADL
InaD-like (Drosophila)
chr6_+_122720681 0.07 ENST00000368455.4
ENST00000452194.1
HSF2
heat shock transcription factor 2
chr1_-_20812690 0.07 ENST00000375078.3
CAMK2N1
calcium/calmodulin-dependent protein kinase II inhibitor 1
chr18_-_45456930 0.07 ENST00000262160.6
ENST00000587269.1
SMAD2
SMAD family member 2
chr2_+_46926048 0.07 ENST00000306503.5
SOCS5
suppressor of cytokine signaling 5
chr5_-_43313574 0.07 ENST00000325110.6
ENST00000433297.2
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chr12_+_19592602 0.07 ENST00000398864.3
ENST00000266508.9
AEBP2
AE binding protein 2
chr1_+_162467595 0.07 ENST00000538489.1
ENST00000489294.1
UHMK1
U2AF homology motif (UHM) kinase 1
chr16_+_69599861 0.06 ENST00000354436.2
NFAT5
nuclear factor of activated T-cells 5, tonicity-responsive
chr1_+_22379120 0.06 ENST00000400259.1
ENST00000344548.3
CDC42
cell division cycle 42
chr2_-_201828356 0.06 ENST00000234296.2
ORC2
origin recognition complex, subunit 2
chr11_+_94822968 0.06 ENST00000278505.4
ENDOD1
endonuclease domain containing 1
chr9_+_15553055 0.06 ENST00000380701.3
CCDC171
coiled-coil domain containing 171
chr11_+_108093839 0.06 ENST00000452508.2
ATM
ataxia telangiectasia mutated
chr10_-_71930222 0.06 ENST00000458634.2
ENST00000373239.2
ENST00000373242.2
ENST00000373241.4
SAR1A
SAR1 homolog A (S. cerevisiae)
chr2_+_24714729 0.06 ENST00000406961.1
ENST00000405141.1
NCOA1
nuclear receptor coactivator 1
chr1_+_40862501 0.06 ENST00000539317.1
SMAP2
small ArfGAP2
chr1_+_32573636 0.05 ENST00000373625.3
KPNA6
karyopherin alpha 6 (importin alpha 7)
chr9_+_116638562 0.05 ENST00000374126.5
ENST00000288466.7
ZNF618
zinc finger protein 618
chr20_+_34020827 0.05 ENST00000374375.1
GDF5OS
growth differentiation factor 5 opposite strand
chr15_-_34628951 0.05 ENST00000397707.2
ENST00000560611.1
SLC12A6
solute carrier family 12 (potassium/chloride transporter), member 6
chr4_+_25314388 0.05 ENST00000302874.4
ZCCHC4
zinc finger, CCHC domain containing 4
chr10_-_735553 0.05 ENST00000280886.6
ENST00000423550.1
DIP2C
DIP2 disco-interacting protein 2 homolog C (Drosophila)
chr9_+_125703282 0.05 ENST00000373647.4
ENST00000402311.1
RABGAP1
RAB GTPase activating protein 1
chr8_+_8860314 0.05 ENST00000250263.7
ENST00000519292.1
ERI1
exoribonuclease 1
chr2_+_173940442 0.05 ENST00000409176.2
ENST00000338983.3
ENST00000431503.2
MLTK
Mitogen-activated protein kinase kinase kinase MLT
chr10_-_81205373 0.05 ENST00000372336.3
ZCCHC24
zinc finger, CCHC domain containing 24
chr6_-_11232891 0.04 ENST00000379433.5
ENST00000379446.5
NEDD9
neural precursor cell expressed, developmentally down-regulated 9
chr16_+_30960375 0.04 ENST00000318663.4
ENST00000566237.1
ENST00000562699.1
ORAI3
ORAI calcium release-activated calcium modulator 3
chr1_-_204329013 0.04 ENST00000272203.3
ENST00000414478.1
PLEKHA6
pleckstrin homology domain containing, family A member 6
chr4_-_157892498 0.04 ENST00000502773.1
PDGFC
platelet derived growth factor C
chr3_-_33481835 0.04 ENST00000283629.3
UBP1
upstream binding protein 1 (LBP-1a)
chr10_+_102222798 0.04 ENST00000343737.5
WNT8B
wingless-type MMTV integration site family, member 8B
chr3_+_85008089 0.04 ENST00000383699.3
CADM2
cell adhesion molecule 2
chr1_+_173684047 0.04 ENST00000546011.1
ENST00000209884.4
KLHL20
kelch-like family member 20
chr5_+_96271141 0.04 ENST00000231368.5
LNPEP
leucyl/cystinyl aminopeptidase
chr17_-_62340581 0.04 ENST00000258991.3
ENST00000583738.1
ENST00000584379.1
TEX2
testis expressed 2
chr20_+_43595115 0.03 ENST00000372806.3
ENST00000396731.4
ENST00000372801.1
ENST00000499879.2
STK4
serine/threonine kinase 4
chr1_-_110052302 0.03 ENST00000369864.4
ENST00000369862.1
AMIGO1
adhesion molecule with Ig-like domain 1
chrX_+_108780062 0.03 ENST00000372106.1
NXT2
nuclear transport factor 2-like export factor 2
chr1_+_100435315 0.03 ENST00000370155.3
ENST00000465289.1
SLC35A3
solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
chr6_-_86352642 0.03 ENST00000355238.6
SYNCRIP
synaptotagmin binding, cytoplasmic RNA interacting protein
chr5_-_142065612 0.03 ENST00000360966.5
ENST00000411960.1
FGF1
fibroblast growth factor 1 (acidic)
chr5_-_59189545 0.03 ENST00000340635.6
PDE4D
phosphodiesterase 4D, cAMP-specific
chr1_-_228135599 0.03 ENST00000272164.5
WNT9A
wingless-type MMTV integration site family, member 9A
chr12_+_109535373 0.03 ENST00000242576.2
UNG
uracil-DNA glycosylase
chr20_+_43104508 0.03 ENST00000262605.4
ENST00000372904.3
TTPAL
tocopherol (alpha) transfer protein-like
chr1_-_109506036 0.02 ENST00000369976.1
ENST00000356970.2
ENST00000369971.2
ENST00000415331.1
ENST00000357393.4
CLCC1
AKNAD1
chloride channel CLIC-like 1
AKNA domain containing 1
chr1_+_78245303 0.02 ENST00000370791.3
ENST00000443751.2
FAM73A
family with sequence similarity 73, member A
chr4_+_6784401 0.02 ENST00000425103.1
ENST00000307659.5
KIAA0232
KIAA0232
chr1_+_117452669 0.02 ENST00000393203.2
PTGFRN
prostaglandin F2 receptor inhibitor
chr3_-_169899504 0.02 ENST00000474275.1
ENST00000484931.1
ENST00000494943.1
ENST00000497658.1
ENST00000465896.1
ENST00000475729.1
ENST00000495893.2
ENST00000481639.1
ENST00000467570.1
ENST00000466189.1
PHC3
polyhomeotic homolog 3 (Drosophila)
chr1_+_84543734 0.02 ENST00000370689.2
PRKACB
protein kinase, cAMP-dependent, catalytic, beta
chr15_-_56209306 0.02 ENST00000506154.1
ENST00000338963.2
ENST00000508342.1
NEDD4
neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
chr1_+_201617450 0.02 ENST00000295624.6
ENST00000367297.4
ENST00000367300.3
NAV1
neuron navigator 1
chr11_-_130184555 0.02 ENST00000525842.1
ZBTB44
zinc finger and BTB domain containing 44
chr6_-_53409890 0.02 ENST00000229416.6
GCLC
glutamate-cysteine ligase, catalytic subunit
chr12_-_56583332 0.02 ENST00000347471.4
ENST00000267064.4
ENST00000394023.3
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr7_-_121036337 0.02 ENST00000426156.1
ENST00000359943.3
ENST00000412653.1
FAM3C
family with sequence similarity 3, member C
chr19_-_36523709 0.02 ENST00000592017.1
ENST00000360535.4
CLIP3
CAP-GLY domain containing linker protein 3
chr10_+_72575643 0.02 ENST00000373202.3
SGPL1
sphingosine-1-phosphate lyase 1
chr20_+_30865429 0.02 ENST00000375712.3
KIF3B
kinesin family member 3B
chr12_+_56360550 0.01 ENST00000266970.4
CDK2
cyclin-dependent kinase 2
chr7_+_66386204 0.01 ENST00000341567.4
ENST00000607045.1
TMEM248
transmembrane protein 248
chr5_+_108083517 0.01 ENST00000281092.4
ENST00000536402.1
FER
fer (fps/fes related) tyrosine kinase
chr20_+_277737 0.01 ENST00000382352.3
ZCCHC3
zinc finger, CCHC domain containing 3
chr11_-_116968987 0.01 ENST00000434315.2
ENST00000292055.4
ENST00000375288.1
ENST00000542607.1
ENST00000445177.1
ENST00000375300.1
ENST00000446921.2
SIK3
SIK family kinase 3
chr7_-_44924939 0.01 ENST00000395699.2
PURB
purine-rich element binding protein B
chr8_+_65492756 0.01 ENST00000321870.1
BHLHE22
basic helix-loop-helix family, member e22
chr15_-_90294523 0.01 ENST00000300057.4
MESP1
mesoderm posterior 1 homolog (mouse)
chr14_+_55518349 0.01 ENST00000395468.4
MAPK1IP1L
mitogen-activated protein kinase 1 interacting protein 1-like
chr1_+_38259540 0.01 ENST00000397631.3
MANEAL
mannosidase, endo-alpha-like
chr12_+_49212514 0.01 ENST00000301050.2
ENST00000548279.1
ENST00000547230.1
CACNB3
calcium channel, voltage-dependent, beta 3 subunit
chr21_-_40685477 0.01 ENST00000342449.3
BRWD1
bromodomain and WD repeat domain containing 1
chr20_+_5107420 0.00 ENST00000460006.1
CDS2
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr22_+_38093005 0.00 ENST00000406386.3
TRIOBP
TRIO and F-actin binding protein
chr8_+_28747884 0.00 ENST00000287701.10
ENST00000444075.1
ENST00000403668.2
ENST00000519662.1
ENST00000558662.1
ENST00000523613.1
ENST00000560599.1
ENST00000397358.3
HMBOX1
homeobox containing 1
chr11_-_79151695 0.00 ENST00000278550.7
TENM4
teneurin transmembrane protein 4
chr5_+_56111361 0.00 ENST00000399503.3
MAP3K1
mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
chr6_-_99873145 0.00 ENST00000369239.5
ENST00000438806.1
PNISR
PNN-interacting serine/arginine-rich protein
chr9_+_140513438 0.00 ENST00000462484.1
ENST00000334856.6
ENST00000460843.1
EHMT1
euchromatic histone-lysine N-methyltransferase 1
chr12_+_54943134 0.00 ENST00000243052.3
PDE1B
phosphodiesterase 1B, calmodulin-dependent

Network of associatons between targets according to the STRING database.

First level regulatory network of AAGGUGC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0034059 response to anoxia(GO:0034059)
0.0 0.1 GO:0002605 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581) negative regulation of dendritic cell antigen processing and presentation(GO:0002605)
0.0 0.3 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.3 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.1 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.0 0.1 GO:0035188 blastocyst hatching(GO:0001835) hatching(GO:0035188) organism emergence from protective structure(GO:0071684)
0.0 0.2 GO:0006235 dTTP biosynthetic process(GO:0006235) pyrimidine deoxyribonucleoside triphosphate biosynthetic process(GO:0009212)
0.0 0.3 GO:0043402 glucocorticoid mediated signaling pathway(GO:0043402)
0.0 0.1 GO:1900224 positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry(GO:1900224)
0.0 0.1 GO:0030047 actin modification(GO:0030047)
0.0 0.1 GO:1904868 telomerase catalytic core complex assembly(GO:1904868) regulation of telomerase catalytic core complex assembly(GO:1904882) positive regulation of telomerase catalytic core complex assembly(GO:1904884)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0 0.2 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0090135 positive regulation of synapse structural plasticity(GO:0051835) actin filament branching(GO:0090135)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0000939 condensed chromosome inner kinetochore(GO:0000939)
0.0 0.1 GO:0033565 ESCRT-0 complex(GO:0033565)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0071598 neuronal ribonucleoprotein granule(GO:0071598)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0004883 glucocorticoid receptor activity(GO:0004883) glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity(GO:0038051)
0.0 0.3 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.1 GO:0070051 fibrinogen binding(GO:0070051)
0.0 0.1 GO:0008427 calcium-dependent protein kinase inhibitor activity(GO:0008427)
0.0 0.1 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.0 0.1 GO:0001069 regulatory region RNA binding(GO:0001069)
0.0 0.3 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0004727 prenylated protein tyrosine phosphatase activity(GO:0004727)
0.0 0.0 GO:0071207 histone pre-mRNA stem-loop binding(GO:0071207)
0.0 0.1 GO:0032427 GBD domain binding(GO:0032427)
0.0 0.0 GO:0019961 interferon binding(GO:0019961)