A549 cells infected with RSV Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000180828.1 | basic helix-loop-helix family member e22 | |
ENSG00000180535.3 | basic helix-loop-helix family member a15 | |
ENSG00000125533.4 | basic helix-loop-helix family member e23 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BHLHA15 | hg19_v2_chr7_+_97840739_97840786 | 0.72 | 2.8e-01 | Click! |
BHLHE22 | hg19_v2_chr8_+_65492756_65492814 | 0.40 | 6.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_32414059 Show fit | 5.64 |
ENST00000553330.1
|
Uncharacterized protein |
|
chr16_-_69385681 Show fit | 1.65 |
ENST00000288025.3
|
transmembrane emp24 protein transport domain containing 6 |
|
chr3_-_121379739 Show fit | 1.48 |
ENST00000428394.2
ENST00000314583.3 |
hematopoietic cell-specific Lyn substrate 1 |
|
chr1_+_81106951 Show fit | 1.42 |
ENST00000443565.1
|
RP5-887A10.1 |
|
chr12_-_94673956 Show fit | 1.31 |
ENST00000551941.1
|
Uncharacterized protein |
|
chr1_+_186344883 Show fit | 1.31 |
ENST00000367470.3
|
chromosome 1 open reading frame 27 |
|
chr15_-_98417780 Show fit | 1.23 |
ENST00000503874.3
|
long intergenic non-protein coding RNA 923 |
|
chr5_-_114632307 Show fit | 1.12 |
ENST00000506442.1
ENST00000379611.5 |
coiled-coil domain containing 112 |
|
chr1_+_186344945 Show fit | 1.01 |
ENST00000419367.3
ENST00000287859.6 |
chromosome 1 open reading frame 27 |
|
chr5_-_114631958 Show fit | 0.91 |
ENST00000395557.4
|
coiled-coil domain containing 112 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | GO:0030854 | positive regulation of granulocyte differentiation(GO:0030854) |
0.2 | 1.4 | GO:2001106 | regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001106) |
0.0 | 0.9 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 0.8 | GO:0010606 | positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606) |
0.2 | 0.7 | GO:0060730 | regulation of intestinal epithelial structure maintenance(GO:0060730) |
0.2 | 0.7 | GO:1990918 | double-strand break repair involved in meiotic recombination(GO:1990918) |
0.0 | 0.7 | GO:0051016 | barbed-end actin filament capping(GO:0051016) |
0.2 | 0.5 | GO:0032918 | polyamine acetylation(GO:0032917) spermidine acetylation(GO:0032918) |
0.2 | 0.5 | GO:0045799 | negative regulation of nucleobase-containing compound transport(GO:0032240) positive regulation of chromatin assembly or disassembly(GO:0045799) negative regulation of RNA export from nucleus(GO:0046832) |
0.1 | 0.5 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.2 | 0.8 | GO:0031251 | PAN complex(GO:0031251) |
0.0 | 0.7 | GO:0008290 | F-actin capping protein complex(GO:0008290) |
0.1 | 0.5 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 0.5 | GO:0042405 | nuclear inclusion body(GO:0042405) |
0.0 | 0.5 | GO:0071564 | npBAF complex(GO:0071564) |
0.0 | 0.5 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 0.5 | GO:0098576 | lumenal side of membrane(GO:0098576) |
0.0 | 0.3 | GO:0060200 | clathrin-sculpted acetylcholine transport vesicle(GO:0060200) clathrin-sculpted acetylcholine transport vesicle membrane(GO:0060201) |
0.1 | 0.2 | GO:0097636 | intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.0 | 0.9 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.0 | 0.7 | GO:0004535 | poly(A)-specific ribonuclease activity(GO:0004535) |
0.0 | 0.6 | GO:0008494 | translation activator activity(GO:0008494) |
0.2 | 0.5 | GO:0004145 | diamine N-acetyltransferase activity(GO:0004145) polyamine binding(GO:0019808) |
0.1 | 0.5 | GO:0003858 | 3-hydroxybutyrate dehydrogenase activity(GO:0003858) |
0.0 | 0.5 | GO:0005487 | nucleocytoplasmic transporter activity(GO:0005487) |
0.0 | 0.4 | GO:0004035 | alkaline phosphatase activity(GO:0004035) |
0.0 | 0.3 | GO:0070139 | ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139) |
0.0 | 0.3 | GO:0030348 | syntaxin-3 binding(GO:0030348) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
0.0 | 0.3 | PID ALK2 PATHWAY | ALK2 signaling events |
0.0 | 0.2 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.0 | 0.7 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 0.5 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.3 | REACTOME ACETYLCHOLINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Acetylcholine Neurotransmitter Release Cycle |
0.0 | 0.3 | REACTOME VEGF LIGAND RECEPTOR INTERACTIONS | Genes involved in VEGF ligand-receptor interactions |
0.0 | 0.2 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |