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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for CACCUCC

Z-value: 0.07

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miRNA associated with seed CACCUCC

NamemiRBASE accession
hsa-miR-1306-5p
MIMAT0022726

Activity profile of CACCUCC motif

Sorted Z-values of CACCUCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr7_-_20826504 0.02 ENST00000418710.2
ENST00000361443.4
SP8
Sp8 transcription factor
chr10_+_99609996 0.02 ENST00000370602.1
GOLGA7B
golgin A7 family, member B
chr11_-_45687128 0.01 ENST00000308064.2
CHST1
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
chr11_+_73087309 0.01 ENST00000064780.2
ENST00000545687.1
RELT
RELT tumor necrosis factor receptor
chr1_+_46972668 0.01 ENST00000371956.4
ENST00000360032.3
DMBX1
diencephalon/mesencephalon homeobox 1
chr3_-_45017609 0.01 ENST00000342790.4
ENST00000424952.2
ENST00000296127.3
ENST00000455235.1
ZDHHC3
zinc finger, DHHC-type containing 3
chr8_+_61591337 0.01 ENST00000423902.2
CHD7
chromodomain helicase DNA binding protein 7
chr6_-_30524951 0.00 ENST00000376621.3
GNL1
guanine nucleotide binding protein-like 1
chr9_+_35749203 0.00 ENST00000456972.2
ENST00000378078.4
RGP1
RGP1 retrograde golgi transport homolog (S. cerevisiae)
chr11_-_64570706 0.00 ENST00000294066.2
ENST00000377350.3
MAP4K2
mitogen-activated protein kinase kinase kinase kinase 2
chr2_-_25475120 0.00 ENST00000380746.4
ENST00000402667.1
DNMT3A
DNA (cytosine-5-)-methyltransferase 3 alpha
chr14_-_23755297 0.00 ENST00000357460.5
HOMEZ
homeobox and leucine zipper encoding
chr15_+_64680003 0.00 ENST00000261884.3
TRIP4
thyroid hormone receptor interactor 4
chr14_+_23776024 0.00 ENST00000553781.1
ENST00000556100.1
ENST00000557236.1
ENST00000557579.1
BCL2L2-PABPN1
BCL2L2
BCL2L2-PABPN1 readthrough
BCL2-like 2
chr15_-_73661605 0.00 ENST00000261917.3
HCN4
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
chr16_-_66584059 0.00 ENST00000417693.3
ENST00000544898.1
ENST00000569718.1
ENST00000527284.1
ENST00000299697.7
ENST00000451102.2
TK2
thymidine kinase 2, mitochondrial
chr6_+_30539153 0.00 ENST00000326195.8
ENST00000376545.3
ENST00000396515.4
ENST00000441867.1
ENST00000468958.1
ABCF1
ATP-binding cassette, sub-family F (GCN20), member 1
chr1_+_11714914 0.00 ENST00000425796.1
ENST00000376770.1
ENST00000376768.1
ENST00000251547.5
ENST00000376760.1
ENST00000376762.4
FBXO44
F-box protein 44
chr22_+_40390930 0.00 ENST00000333407.6
FAM83F
family with sequence similarity 83, member F
chr16_+_30935418 0.00 ENST00000338343.4
FBXL19
F-box and leucine-rich repeat protein 19
chr22_-_44708731 0.00 ENST00000381176.4
KIAA1644
KIAA1644
chr11_-_65430251 0.00 ENST00000534283.1
ENST00000527749.1
ENST00000533187.1
ENST00000525693.1
ENST00000534558.1
ENST00000532879.1
ENST00000532999.1
RELA
v-rel avian reticuloendotheliosis viral oncogene homolog A
chr9_-_101471479 0.00 ENST00000259455.2
GABBR2
gamma-aminobutyric acid (GABA) B receptor, 2
chr20_+_42875887 0.00 ENST00000342560.5
GDAP1L1
ganglioside induced differentiation associated protein 1-like 1
chr9_-_130829588 0.00 ENST00000373078.4
NAIF1
nuclear apoptosis inducing factor 1
chr8_+_11141925 0.00 ENST00000221086.3
MTMR9
myotubularin related protein 9
chr5_+_175792459 0.00 ENST00000310389.5
ARL10
ADP-ribosylation factor-like 10
chr2_-_169104651 0.00 ENST00000355999.4
STK39
serine threonine kinase 39
chr8_+_56014949 0.00 ENST00000327381.6
XKR4
XK, Kell blood group complex subunit-related family, member 4
chr7_+_30951461 0.00 ENST00000311813.4
AQP1
aquaporin 1 (Colton blood group)
chrX_-_53449593 0.00 ENST00000375340.6
ENST00000322213.4
SMC1A
structural maintenance of chromosomes 1A

Network of associatons between targets according to the STRING database.

First level regulatory network of CACCUCC

PNG image of the network

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Gene Ontology Analysis