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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for GAGAUGA

Z-value: 0.40

Motif logo

miRNA associated with seed GAGAUGA

NamemiRBASE accession
MIMAT0000435
MIMAT0019924
MIMAT0023713

Activity profile of GAGAUGA motif

Sorted Z-values of GAGAUGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chrX_-_106959631 0.39 ENST00000486554.1
ENST00000372390.4
TSC22 domain family, member 3
chr3_+_113465866 0.28 ENST00000273398.3
ENST00000538620.1
ENST00000496747.1
ENST00000475322.1
ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
chr1_+_62208091 0.28 ENST00000316485.6
ENST00000371158.2
InaD-like (Drosophila)
chr18_+_9136758 0.27 ENST00000383440.2
ENST00000262126.4
ENST00000577992.1
ankyrin repeat domain 12
chr4_-_53525406 0.21 ENST00000451218.2
ENST00000441222.3
ubiquitin specific peptidase 46
chr13_+_48807288 0.20 ENST00000378565.5
integral membrane protein 2B
chr3_-_122102065 0.20 ENST00000479899.1
ENST00000291458.5
ENST00000497726.1
coiled-coil domain containing 58
chr14_-_96830207 0.17 ENST00000359933.4
autophagy related 2B
chr11_+_13690200 0.15 ENST00000354817.3
fatty acyl CoA reductase 1
chr6_-_132272504 0.14 ENST00000367976.3
connective tissue growth factor
chr3_-_37034702 0.13 ENST00000322716.5
EPM2A (laforin) interacting protein 1
chr17_+_55333876 0.13 ENST00000284073.2
musashi RNA-binding protein 2
chr17_+_28705921 0.13 ENST00000225719.4
carboxypeptidase D
chr12_+_56473628 0.12 ENST00000549282.1
ENST00000549061.1
ENST00000267101.3
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
chr9_+_116638562 0.12 ENST00000374126.5
ENST00000288466.7
zinc finger protein 618
chr5_+_145583156 0.12 ENST00000265271.5
RNA binding motif protein 27
chr3_+_36421826 0.12 ENST00000273183.3
SH3 and cysteine rich domain
chr5_-_100238956 0.12 ENST00000231461.5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
chr3_-_52188397 0.11 ENST00000474012.1
ENST00000296484.2
POC1 centriolar protein A
chr2_+_173292301 0.11 ENST00000264106.6
ENST00000375221.2
ENST00000343713.4
integrin, alpha 6
chr1_+_87794150 0.10 ENST00000370544.5
LIM domain only 4
chr9_-_123476719 0.10 ENST00000373930.3
multiple EGF-like-domains 9
chr4_+_15004165 0.09 ENST00000538197.1
ENST00000541112.1
ENST00000442003.2
cytoplasmic polyadenylation element binding protein 2
chr12_-_65146636 0.09 ENST00000418919.2
glucosamine (N-acetyl)-6-sulfatase
chr12_-_46766577 0.09 ENST00000256689.5
solute carrier family 38, member 2
chr4_+_44680429 0.09 ENST00000281543.5
GUF1 GTPase homolog (S. cerevisiae)
chr8_-_63998590 0.09 ENST00000260116.4
tocopherol (alpha) transfer protein
chr20_-_48099182 0.09 ENST00000371741.4
potassium voltage-gated channel, Shab-related subfamily, member 1
chr15_-_49338748 0.09 ENST00000559471.1
SECIS binding protein 2-like
chr6_-_91296602 0.08 ENST00000369325.3
ENST00000369327.3
mitogen-activated protein kinase kinase kinase 7
chr11_+_86748863 0.08 ENST00000340353.7
transmembrane protein 135
chr6_-_99963252 0.08 ENST00000392738.2
ENST00000327681.6
ENST00000472914.2
ubiquitin specific peptidase 45
chr10_-_105615164 0.08 ENST00000355946.2
ENST00000369774.4
SH3 and PX domains 2A
chr3_-_24536253 0.08 ENST00000428492.1
ENST00000396671.2
ENST00000431815.1
ENST00000418247.1
ENST00000416420.1
ENST00000356447.4
thyroid hormone receptor, beta
chr10_+_111767720 0.08 ENST00000356080.4
ENST00000277900.8
adducin 3 (gamma)
chr19_-_47735918 0.07 ENST00000449228.1
ENST00000300880.7
ENST00000341983.4
BCL2 binding component 3
chr2_+_187350883 0.07 ENST00000337859.6
zinc finger CCCH-type containing 15
chr17_+_38278530 0.07 ENST00000398532.4
male-specific lethal 1 homolog (Drosophila)
chr20_+_42295745 0.07 ENST00000396863.4
ENST00000217026.4
v-myb avian myeloblastosis viral oncogene homolog-like 2
chr14_-_31495569 0.07 ENST00000357479.5
ENST00000355683.5
striatin, calmodulin binding protein 3
chr17_-_46623441 0.07 ENST00000330070.4
homeobox B2
chr4_+_99916765 0.06 ENST00000296411.6
methionyl aminopeptidase 1
chr12_-_31479045 0.06 ENST00000539409.1
ENST00000395766.1
family with sequence similarity 60, member A
chr2_-_190044480 0.06 ENST00000374866.3
collagen, type V, alpha 2
chr15_+_39873268 0.06 ENST00000397591.2
ENST00000260356.5
thrombospondin 1
chr1_+_64936428 0.06 ENST00000371073.2
ENST00000290039.5
cache domain containing 1
chr1_-_211752073 0.06 ENST00000367001.4
solute carrier family 30 (zinc transporter), member 1
chr18_-_29522989 0.05 ENST00000582539.1
ENST00000283351.4
ENST00000582513.1
trafficking protein particle complex 8
chr1_+_110527308 0.05 ENST00000369799.5
adenosylhomocysteinase-like 1
chr13_+_45563721 0.05 ENST00000361121.2
GPALPP motifs containing 1
chr17_+_65821780 0.05 ENST00000321892.4
ENST00000335221.5
ENST00000306378.6
bromodomain PHD finger transcription factor
chr16_+_67063036 0.05 ENST00000290858.6
ENST00000564034.1
core-binding factor, beta subunit
chr20_+_30865429 0.05 ENST00000375712.3
kinesin family member 3B
chr2_+_172778952 0.05 ENST00000392584.1
ENST00000264108.4
histone acetyltransferase 1
chr6_+_155054459 0.05 ENST00000367178.3
ENST00000417268.1
ENST00000367186.4
SR-related CTD-associated factor 8
chr1_+_178062855 0.05 ENST00000448150.3
RAS protein activator like 2
chrX_-_48858630 0.05 ENST00000376425.3
ENST00000376444.3
GRIP1 associated protein 1
chr11_-_9336234 0.05 ENST00000528080.1
transmembrane protein 41B
chrX_+_133507327 0.05 ENST00000332070.3
ENST00000394292.1
ENST00000370799.1
ENST00000416404.2
PHD finger protein 6
chr15_-_100258029 0.05 ENST00000378904.2
DKFZP779J2370
chr1_+_89990431 0.05 ENST00000330947.2
ENST00000358200.4
leucine rich repeat containing 8 family, member B
chr14_-_31676964 0.05 ENST00000553700.1
HECT domain containing E3 ubiquitin protein ligase 1
chr12_-_25403737 0.04 ENST00000256078.4
ENST00000556131.1
ENST00000311936.3
ENST00000557334.1
Kirsten rat sarcoma viral oncogene homolog
chr17_-_28618948 0.04 ENST00000261714.6
bleomycin hydrolase
chr4_+_128703295 0.04 ENST00000296464.4
ENST00000508549.1
heat shock 70kDa protein 4-like
chr11_-_130184555 0.04 ENST00000525842.1
zinc finger and BTB domain containing 44
chr1_+_27153173 0.04 ENST00000374142.4
zinc finger, DHHC-type containing 18
chr20_+_2673383 0.04 ENST00000380648.4
ENST00000342725.5
early B-cell factor 4
chr5_+_32711419 0.04 ENST00000265074.8
natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
chr12_+_112856690 0.03 ENST00000392597.1
ENST00000351677.2
protein tyrosine phosphatase, non-receptor type 11
chr5_+_141488070 0.03 ENST00000253814.4
Nedd4 family interacting protein 1
chr7_+_142985308 0.03 ENST00000310447.5
caspase 2, apoptosis-related cysteine peptidase
chr1_+_51701924 0.03 ENST00000242719.3
ring finger protein 11
chrX_-_109561294 0.03 ENST00000372059.2
ENST00000262844.5
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr20_-_50159198 0.03 ENST00000371564.3
ENST00000396009.3
ENST00000610033.1
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
chr1_-_186649543 0.03 ENST00000367468.5
prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
chr3_+_72937182 0.03 ENST00000389617.4
glucoside xylosyltransferase 2
chr17_+_56160768 0.03 ENST00000579991.2
dynein, light chain, LC8-type 2
chr17_+_38219063 0.03 ENST00000584985.1
ENST00000264637.4
ENST00000450525.2
thyroid hormone receptor, alpha
chr13_+_73632897 0.03 ENST00000377687.4
Kruppel-like factor 5 (intestinal)
chr19_+_3359561 0.03 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
nuclear factor I/C (CCAAT-binding transcription factor)
chr2_+_97481974 0.03 ENST00000377060.3
ENST00000305510.3
cyclin M3
chr17_+_14204389 0.03 ENST00000360954.2
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
chr9_-_113342160 0.03 ENST00000401783.2
ENST00000374461.1
sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
chr4_-_24914508 0.03 ENST00000504487.1
coiled-coil domain containing 149
chr15_-_68724490 0.03 ENST00000315757.7
ENST00000423218.2
integrin, alpha 11
chr1_-_115259337 0.03 ENST00000369535.4
neuroblastoma RAS viral (v-ras) oncogene homolog
chr10_+_76871454 0.03 ENST00000372687.4
sterile alpha motif domain containing 8
chr1_-_231560790 0.03 ENST00000366641.3
egl-9 family hypoxia-inducible factor 1
chr12_+_12764773 0.02 ENST00000228865.2
cAMP responsive element binding protein-like 2
chr13_+_28813645 0.02 ENST00000282391.5
PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
chrX_-_63425561 0.02 ENST00000374869.3
ENST00000330258.3
APC membrane recruitment protein 1
chr22_-_22221900 0.02 ENST00000215832.6
ENST00000398822.3
mitogen-activated protein kinase 1
chr7_+_127292234 0.02 ENST00000354725.3
staphylococcal nuclease and tudor domain containing 1
chr14_+_90863327 0.02 ENST00000356978.4
calmodulin 1 (phosphorylase kinase, delta)
chr17_+_57784826 0.02 ENST00000262291.4
vacuole membrane protein 1
chr4_+_87856129 0.02 ENST00000395146.4
ENST00000507468.1
AF4/FMR2 family, member 1
chr11_-_77532050 0.02 ENST00000308488.6
remodeling and spacing factor 1
chr6_+_107811162 0.02 ENST00000317357.5
sine oculis binding protein homolog (Drosophila)
chr11_+_118477144 0.02 ENST00000361417.2
pleckstrin homology-like domain, family B, member 1
chr2_-_118771701 0.02 ENST00000376300.2
ENST00000319432.5
coiled-coil domain containing 93
chr15_+_65134088 0.02 ENST00000323544.4
ENST00000437723.1
pleckstrin homology domain containing, family O member 2
Uncharacterized protein
chr5_+_71403061 0.02 ENST00000512974.1
ENST00000296755.7
microtubule-associated protein 1B
chr2_-_180129484 0.02 ENST00000428443.3
SEC14 and spectrin domains 1
chr8_-_38853990 0.02 ENST00000456845.2
ENST00000397070.2
ENST00000517872.1
ENST00000412303.1
ENST00000456397.2
TM2 domain containing 2
chr4_+_77870856 0.02 ENST00000264893.6
ENST00000502584.1
ENST00000510641.1
septin 11
chr4_-_79860506 0.02 ENST00000295462.3
ENST00000380645.4
ENST00000512733.1
progestin and adipoQ receptor family member III
chr20_-_40247133 0.02 ENST00000373233.3
ENST00000309279.7
chromodomain helicase DNA binding protein 6
chr3_-_125094093 0.02 ENST00000484491.1
ENST00000492394.1
ENST00000471196.1
ENST00000468369.1
ENST00000544464.1
ENST00000485866.1
ENST00000360647.4
zinc finger protein 148
chr2_+_75061108 0.02 ENST00000290573.2
hexokinase 2
chr19_+_37960240 0.02 ENST00000388801.3
zinc finger protein 570
chr3_+_9975497 0.02 ENST00000397170.3
ENST00000383811.3
ENST00000452070.1
ENST00000326434.5
cysteine-rich with EGF-like domains 1
chr5_+_139944024 0.02 ENST00000323146.3
solute carrier family 35, member A4
chr15_+_44719394 0.02 ENST00000260327.4
ENST00000396780.1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr6_+_163835669 0.02 ENST00000453779.2
ENST00000275262.7
ENST00000392127.2
ENST00000361752.3
QKI, KH domain containing, RNA binding
chr10_-_30024716 0.02 ENST00000375398.2
ENST00000375400.3
supervillin
chr10_+_65281123 0.02 ENST00000298249.4
ENST00000373758.4
receptor accessory protein 3
chr15_+_31619013 0.02 ENST00000307145.3
Kruppel-like factor 13
chr6_-_33282163 0.02 ENST00000434618.2
ENST00000456592.2
TAP binding protein (tapasin)
chr1_-_40137710 0.02 ENST00000235628.1
5'-nucleotidase, cytosolic IA
chr8_-_105601134 0.02 ENST00000276654.5
ENST00000424843.2
low density lipoprotein receptor-related protein 12
chr15_+_77287426 0.02 ENST00000558012.1
ENST00000267939.5
ENST00000379595.3
proline-serine-threonine phosphatase interacting protein 1
chr5_-_159846399 0.02 ENST00000297151.4
SLU7 splicing factor homolog (S. cerevisiae)
chr7_-_128695147 0.01 ENST00000482320.1
ENST00000393245.1
ENST00000471234.1
transportin 3
chr15_+_85923856 0.01 ENST00000560302.1
ENST00000394518.2
ENST00000361243.2
ENST00000560256.1
A kinase (PRKA) anchor protein 13
chr5_+_54455946 0.01 ENST00000503787.1
ENST00000296734.6
ENST00000515370.1
glutathione peroxidase 8 (putative)
chr2_-_73053126 0.01 ENST00000272427.6
ENST00000410104.1
exocyst complex component 6B
chr12_-_53625958 0.01 ENST00000327550.3
ENST00000546717.1
ENST00000425354.2
ENST00000394426.1
retinoic acid receptor, gamma
chr12_-_42538657 0.01 ENST00000398675.3
glucoside xylosyltransferase 1
chr5_+_141303373 0.01 ENST00000432126.2
ENST00000194118.4
KIAA0141
chr9_-_74525658 0.01 ENST00000333421.6
abhydrolase domain containing 17B
chr21_-_46238034 0.01 ENST00000332859.6
small ubiquitin-like modifier 3
chr11_+_57520715 0.01 ENST00000524630.1
ENST00000529919.1
ENST00000399039.4
ENST00000533189.1
catenin (cadherin-associated protein), delta 1
chr10_+_88516396 0.01 ENST00000372037.3
bone morphogenetic protein receptor, type IA
chr2_+_120517174 0.01 ENST00000263708.2
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
chr1_-_154155595 0.01 ENST00000328159.4
ENST00000368531.2
ENST00000323144.7
ENST00000368533.3
ENST00000341372.3
tropomyosin 3
chr1_+_36348790 0.01 ENST00000373204.4
argonaute RISC catalytic component 1
chrX_+_69664706 0.01 ENST00000194900.4
ENST00000374360.3
discs, large homolog 3 (Drosophila)
chr2_-_164592497 0.01 ENST00000333129.3
ENST00000409634.1
fidgetin
chr6_+_114178512 0.01 ENST00000368635.4
myristoylated alanine-rich protein kinase C substrate
chr13_-_33002151 0.01 ENST00000495479.1
ENST00000343281.4
ENST00000464470.1
ENST00000380139.4
ENST00000380133.2
NEDD4 binding protein 2-like 1
chr18_-_54305658 0.00 ENST00000586262.1
ENST00000217515.6
thioredoxin-like 1
chr2_-_9563319 0.00 ENST00000497105.1
ENST00000360635.3
ENST00000359712.3
integrin beta 1 binding protein 1
chr17_-_29151794 0.00 ENST00000324238.6
cytokine receptor-like factor 3
chr2_+_233562015 0.00 ENST00000427233.1
ENST00000373566.3
ENST00000373563.4
ENST00000428883.1
ENST00000456491.1
ENST00000409480.1
ENST00000421433.1
ENST00000425040.1
ENST00000430720.1
ENST00000409547.1
ENST00000423659.1
ENST00000409196.3
ENST00000409451.3
ENST00000429187.1
ENST00000440945.1
GRB10 interacting GYF protein 2
chr16_+_70148230 0.00 ENST00000398122.3
ENST00000568530.1
pyruvate dehydrogenase phosphatase regulatory subunit
chr6_+_132129151 0.00 ENST00000360971.2
ectonucleotide pyrophosphatase/phosphodiesterase 1
chr9_+_90112741 0.00 ENST00000469640.2
death-associated protein kinase 1
chr16_+_66400533 0.00 ENST00000341529.3
cadherin 5, type 2 (vascular endothelium)
chr18_-_60987220 0.00 ENST00000398117.1
B-cell CLL/lymphoma 2
chr2_-_10952922 0.00 ENST00000272227.3
protein disulfide isomerase family A, member 6
chr1_-_33338076 0.00 ENST00000496770.1
fibronectin type III domain containing 5
chr17_-_61920280 0.00 ENST00000448276.2
ENST00000577990.1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAUGA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0034059 response to anoxia(GO:0034059)
0.0 0.1 GO:0010701 positive regulation of norepinephrine secretion(GO:0010701)
0.0 0.4 GO:0070235 regulation of activation-induced cell death of T cells(GO:0070235) negative regulation of activation-induced cell death of T cells(GO:0070236)
0.0 0.1 GO:0046504 ether lipid biosynthetic process(GO:0008611) wax biosynthetic process(GO:0010025) wax metabolic process(GO:0010166) glycerol ether biosynthetic process(GO:0046504) ether biosynthetic process(GO:1901503)
0.0 0.1 GO:1900248 cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)
0.0 0.2 GO:0042985 negative regulation of amyloid precursor protein biosynthetic process(GO:0042985)
0.0 0.1 GO:0021569 rhombomere 3 development(GO:0021569)
0.0 0.1 GO:0008050 female courtship behavior(GO:0008050)
0.0 0.2 GO:0008343 adult feeding behavior(GO:0008343)
0.0 0.1 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.0 0.1 GO:0002605 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581) negative regulation of dendritic cell antigen processing and presentation(GO:0002605)
0.0 0.1 GO:0090210 vitamin E metabolic process(GO:0042360) regulation of establishment of blood-brain barrier(GO:0090210) negative regulation of establishment of blood-brain barrier(GO:0090212)
0.0 0.1 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.0 0.0 GO:0035022 positive regulation of Rac protein signal transduction(GO:0035022)
0.0 0.1 GO:2000467 positive regulation of glycogen (starch) synthase activity(GO:2000467)
0.0 0.0 GO:0051462 cortisol secretion(GO:0043400) regulation of cortisol secretion(GO:0051462)
0.0 0.3 GO:0036295 cellular response to increased oxygen levels(GO:0036295)
0.0 0.1 GO:0072675 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.0 0.0 GO:0090271 positive regulation of fibroblast growth factor production(GO:0090271)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0034676 integrin alpha6-beta4 complex(GO:0034676)
0.0 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.1 GO:0031523 Myb complex(GO:0031523)
0.0 0.0 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.1 GO:0016939 plus-end kinesin complex(GO:0005873) kinesin II complex(GO:0016939)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 GO:0043426 MRF binding(GO:0043426)
0.0 0.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:0008431 vitamin E binding(GO:0008431)
0.0 0.1 GO:0033691 sialic acid binding(GO:0033691)
0.0 0.2 GO:0038132 neuregulin binding(GO:0038132)
0.0 0.1 GO:0008449 N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.0 0.1 GO:0035368 selenocysteine insertion sequence binding(GO:0035368)
0.0 0.1 GO:0070051 fibrinogen binding(GO:0070051)