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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)
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Results for GGAGUGU
Z-value: 0.31
Motif logo
miRNA associated with seed GGAGUGU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-122-5p
|
MIMAT0000421 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr5_+_162864575 Show fit | 0.36 |
ENST00000512163.1
ENST00000393929.1 ENST00000340828.2 ENST00000511683.2 ENST00000510097.1 ENST00000511490.2 ENST00000510664.1 |
cyclin G1 |
|
| chr1_+_28586006 Show fit | 0.17 |
ENST00000253063.3
|
sestrin 2 |
|
| chr4_-_76598296 Show fit | 0.17 |
ENST00000395719.3
|
GTPase activating protein (SH3 domain) binding protein 2 |
|
| chr7_-_95225768 Show fit | 0.14 |
ENST00000005178.5
|
pyruvate dehydrogenase kinase, isozyme 4 |
|
| chr7_+_94285637 Show fit | 0.11 |
ENST00000482108.1
ENST00000488574.1 |
paternally expressed 10 |
|
| chr1_+_16062820 Show fit | 0.10 |
ENST00000294454.5
|
solute carrier family 25, member 34 |
|
| chr4_-_53525406 Show fit | 0.10 |
ENST00000451218.2
ENST00000441222.3 |
ubiquitin specific peptidase 46 |
|
| chr1_-_244615425 Show fit | 0.08 |
ENST00000366535.3
|
adenylosuccinate synthase |
|
| chr10_-_32345305 Show fit | 0.07 |
ENST00000302418.4
|
kinesin family member 5B |
|
| chr2_-_96811170 Show fit | 0.07 |
ENST00000288943.4
|
dual specificity phosphatase 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GGAGUGU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0090526 | regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526) |
| 0.0 | 0.1 | GO:0061763 | multivesicular body-lysosome fusion(GO:0061763) |
| 0.0 | 0.1 | GO:0001544 | initiation of primordial ovarian follicle growth(GO:0001544) |
| 0.0 | 0.1 | GO:0044208 | 'de novo' AMP biosynthetic process(GO:0044208) |
| 0.0 | 0.1 | GO:0035617 | stress granule disassembly(GO:0035617) |
| 0.0 | 0.1 | GO:0008343 | adult feeding behavior(GO:0008343) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:1990316 | ATG1/ULK1 kinase complex(GO:1990316) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0070728 | leucine binding(GO:0070728) |
| 0.0 | 0.1 | GO:0004740 | pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740) |
| 0.0 | 0.1 | GO:0004019 | adenylosuccinate synthase activity(GO:0004019) |
| 0.0 | 0.1 | GO:0099609 | microtubule lateral binding(GO:0099609) |