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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for NR1D1

Z-value: 0.62

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Transcription factors associated with NR1D1

Gene Symbol Gene ID Gene Info
NR1D1
ENSG00000126368.5 nuclear receptor subfamily 1 group D member 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NR1D1hg19_v2_chr17_-_38256973_382569900.505.0e-01Click!

Activity profile of NR1D1 motif

Sorted Z-values of NR1D1 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr22_-_37880543 0.79 ENST00000442496.1
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr22_-_20138302 0.76 ENST00000540078.1
ENST00000439765.2
AC006547.14
uncharacterized protein LOC388849
chr16_-_70712229 0.67 ENST00000562883.2
MTSS1L
metastasis suppressor 1-like
chr3_-_182703688 0.54 ENST00000466812.1
ENST00000487822.1
ENST00000460412.1
ENST00000469954.1
DCUN1D1
DCN1, defective in cullin neddylation 1, domain containing 1
chr11_+_327171 0.38 ENST00000534483.1
ENST00000524824.1
ENST00000531076.1
RP11-326C3.12
RP11-326C3.12
chr1_-_26233423 0.38 ENST00000357865.2
STMN1
stathmin 1
chr17_-_74528128 0.38 ENST00000590175.1
CYGB
cytoglobin
chr19_+_38880695 0.38 ENST00000587947.1
ENST00000338502.4
SPRED3
sprouty-related, EVH1 domain containing 3
chr1_-_11865351 0.36 ENST00000413656.1
ENST00000376585.1
ENST00000423400.1
ENST00000431243.1
MTHFR
methylenetetrahydrofolate reductase (NAD(P)H)
chr14_-_23770683 0.35 ENST00000561437.1
ENST00000559942.1
ENST00000560913.1
ENST00000559314.1
ENST00000558058.1
PPP1R3E
protein phosphatase 1, regulatory subunit 3E
chr13_+_27844464 0.32 ENST00000241463.4
RASL11A
RAS-like, family 11, member A
chr15_+_65903680 0.31 ENST00000537259.1
SLC24A1
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
chr1_-_26232522 0.31 ENST00000399728.1
STMN1
stathmin 1
chr1_-_26232951 0.29 ENST00000426559.2
ENST00000455785.2
STMN1
stathmin 1
chr14_+_74815116 0.28 ENST00000256362.4
VRTN
vertebrae development associated
chr1_+_110210644 0.27 ENST00000369831.2
ENST00000442650.1
ENST00000369827.3
ENST00000460717.3
ENST00000241337.4
ENST00000467579.3
ENST00000414179.2
ENST00000369829.2
GSTM2
glutathione S-transferase mu 2 (muscle)
chr1_+_111992064 0.27 ENST00000483994.1
ATP5F1
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
chr15_-_81282133 0.26 ENST00000261758.4
MESDC2
mesoderm development candidate 2
chr11_+_827248 0.25 ENST00000527089.1
ENST00000530183.1
EFCAB4A
EF-hand calcium binding domain 4A
chr7_+_139025875 0.25 ENST00000297534.6
C7orf55
chromosome 7 open reading frame 55
chr3_-_45957088 0.24 ENST00000539217.1
LZTFL1
leucine zipper transcription factor-like 1
chr9_+_136243117 0.23 ENST00000426926.2
ENST00000371957.3
C9orf96
chromosome 9 open reading frame 96
chr6_+_63921351 0.23 ENST00000370659.1
FKBP1C
FK506 binding protein 1C
chr1_+_44399347 0.22 ENST00000477048.1
ENST00000471394.2
ARTN
artemin
chr1_+_200863949 0.21 ENST00000413687.2
C1orf106
chromosome 1 open reading frame 106
chr13_+_113622810 0.20 ENST00000397030.1
MCF2L
MCF.2 cell line derived transforming sequence-like
chr14_-_50999307 0.20 ENST00000013125.4
MAP4K5
mitogen-activated protein kinase kinase kinase kinase 5
chr19_-_18995029 0.19 ENST00000596048.1
CERS1
ceramide synthase 1
chr7_+_94139105 0.19 ENST00000297273.4
CASD1
CAS1 domain containing 1
chr13_+_113622757 0.19 ENST00000375604.2
MCF2L
MCF.2 cell line derived transforming sequence-like
chrY_+_2803322 0.18 ENST00000383052.1
ENST00000155093.3
ENST00000449237.1
ENST00000443793.1
ZFY
zinc finger protein, Y-linked
chr1_-_226374373 0.18 ENST00000366812.5
ACBD3
acyl-CoA binding domain containing 3
chr2_-_64371546 0.17 ENST00000358912.4
PELI1
pellino E3 ubiquitin protein ligase 1
chr10_-_8095412 0.16 ENST00000458727.1
ENST00000355358.1
RP11-379F12.3
GATA3-AS1
RP11-379F12.3
GATA3 antisense RNA 1
chr4_+_169842707 0.16 ENST00000503290.1
PALLD
palladin, cytoskeletal associated protein
chr11_+_46740730 0.16 ENST00000311907.5
ENST00000530231.1
ENST00000442468.1
F2
coagulation factor II (thrombin)
chr11_-_64013663 0.16 ENST00000392210.2
PPP1R14B
protein phosphatase 1, regulatory (inhibitor) subunit 14B
chr12_-_123755639 0.14 ENST00000535979.1
CDK2AP1
cyclin-dependent kinase 2 associated protein 1
chr15_-_65903512 0.14 ENST00000567923.1
VWA9
von Willebrand factor A domain containing 9
chr2_-_103353277 0.13 ENST00000258436.5
MFSD9
major facilitator superfamily domain containing 9
chr7_+_114562172 0.13 ENST00000393486.1
ENST00000257724.3
MDFIC
MyoD family inhibitor domain containing
chr15_-_65903407 0.13 ENST00000395644.4
ENST00000567744.1
ENST00000568573.1
ENST00000562830.1
ENST00000569491.1
ENST00000561769.1
VWA9
von Willebrand factor A domain containing 9
chr12_-_110883346 0.12 ENST00000547365.1
ARPC3
actin related protein 2/3 complex, subunit 3, 21kDa
chr13_+_113623509 0.12 ENST00000535094.2
MCF2L
MCF.2 cell line derived transforming sequence-like
chr1_+_159796589 0.12 ENST00000368104.4
SLAMF8
SLAM family member 8
chr2_-_63815860 0.12 ENST00000272321.7
ENST00000431065.1
WDPCP
WD repeat containing planar cell polarity effector
chr12_+_57854274 0.11 ENST00000528432.1
GLI1
GLI family zinc finger 1
chr11_+_125365110 0.11 ENST00000527818.1
AP000708.1
AP000708.1
chr14_+_24540154 0.11 ENST00000559778.1
ENST00000560761.1
ENST00000557889.1
CPNE6
copine VI (neuronal)
chrX_+_24167746 0.11 ENST00000428571.1
ENST00000539115.1
ZFX
zinc finger protein, X-linked
chr2_+_63816295 0.10 ENST00000539945.1
ENST00000544381.1
MDH1
malate dehydrogenase 1, NAD (soluble)
chr10_-_103880209 0.10 ENST00000425280.1
LDB1
LIM domain binding 1
chr14_-_50999373 0.10 ENST00000554273.1
MAP4K5
mitogen-activated protein kinase kinase kinase kinase 5
chr1_+_218519577 0.10 ENST00000366930.4
ENST00000366929.4
TGFB2
transforming growth factor, beta 2
chr3_+_58223228 0.09 ENST00000478253.1
ENST00000295962.4
ABHD6
abhydrolase domain containing 6
chr9_+_103790991 0.09 ENST00000374874.3
LPPR1
Lipid phosphate phosphatase-related protein type 1
chr10_-_43762329 0.09 ENST00000395810.1
RASGEF1A
RasGEF domain family, member 1A
chr13_+_100741269 0.09 ENST00000376286.4
ENST00000376279.3
ENST00000376285.1
PCCA
propionyl CoA carboxylase, alpha polypeptide
chr19_-_19932501 0.09 ENST00000540806.2
ENST00000590766.1
ENST00000587452.1
ENST00000545006.1
ENST00000590319.1
ENST00000587461.1
ENST00000450683.2
ENST00000443905.2
ENST00000590274.1
ZNF506
CTC-559E9.4
zinc finger protein 506
CTC-559E9.4
chr1_+_159796534 0.09 ENST00000289707.5
SLAMF8
SLAM family member 8
chr17_+_39411636 0.09 ENST00000394008.1
KRTAP9-9
keratin associated protein 9-9
chr5_-_43313574 0.08 ENST00000325110.6
ENST00000433297.2
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chr19_-_43702231 0.08 ENST00000597374.1
ENST00000599371.1
PSG4
pregnancy specific beta-1-glycoprotein 4
chr19_-_58071166 0.08 ENST00000601415.1
ZNF550
zinc finger protein 550
chr2_+_203776937 0.07 ENST00000402905.3
ENST00000414490.1
ENST00000431787.1
ENST00000444724.1
ENST00000414857.1
ENST00000430899.1
ENST00000445120.1
ENST00000441569.1
ENST00000432024.1
ENST00000443740.1
ENST00000414439.1
ENST00000428585.1
ENST00000545253.1
ENST00000545262.1
ENST00000447539.1
ENST00000456821.2
ENST00000434998.1
ENST00000320443.8
CARF
calcium responsive transcription factor
chr3_-_49203744 0.07 ENST00000321895.6
CCDC71
coiled-coil domain containing 71
chr15_-_65903574 0.07 ENST00000420799.2
ENST00000313182.2
ENST00000431261.2
ENST00000442903.3
VWA9
von Willebrand factor A domain containing 9
chr1_+_203764742 0.07 ENST00000432282.1
ENST00000453771.1
ENST00000367214.1
ENST00000367212.3
ENST00000332127.4
ZC3H11A
zinc finger CCCH-type containing 11A
chr9_+_116343192 0.07 ENST00000471324.2
RGS3
regulator of G-protein signaling 3
chr19_+_39647271 0.07 ENST00000599657.1
PAK4
p21 protein (Cdc42/Rac)-activated kinase 4
chr3_+_169755715 0.07 ENST00000355897.5
GPR160
G protein-coupled receptor 160
chr6_-_27440837 0.07 ENST00000211936.6
ZNF184
zinc finger protein 184
chr9_+_91150016 0.07 ENST00000375854.3
ENST00000375855.3
NXNL2
nucleoredoxin-like 2
chr9_-_136242956 0.07 ENST00000371989.3
ENST00000485435.2
SURF4
surfeit 4
chr14_+_100789669 0.07 ENST00000361529.3
ENST00000557052.1
SLC25A47
solute carrier family 25, member 47
chrX_+_54947229 0.07 ENST00000442098.1
ENST00000430420.1
ENST00000453081.1
ENST00000173898.7
ENST00000319167.8
ENST00000375022.4
ENST00000399736.1
ENST00000440072.1
ENST00000420798.2
ENST00000431115.1
ENST00000440759.1
ENST00000375041.2
TRO
trophinin
chr19_-_51220176 0.07 ENST00000359082.3
ENST00000293441.1
SHANK1
SH3 and multiple ankyrin repeat domains 1
chr2_+_63816087 0.06 ENST00000409908.1
ENST00000442225.1
ENST00000409476.1
ENST00000436321.1
MDH1
malate dehydrogenase 1, NAD (soluble)
chr16_+_71392616 0.06 ENST00000349553.5
ENST00000302628.4
ENST00000562305.1
CALB2
calbindin 2
chrX_+_24167828 0.06 ENST00000379188.3
ENST00000419690.1
ENST00000379177.1
ENST00000304543.5
ZFX
zinc finger protein, X-linked
chr1_-_154178803 0.06 ENST00000368525.3
C1orf189
chromosome 1 open reading frame 189
chr2_-_73053126 0.06 ENST00000272427.6
ENST00000410104.1
EXOC6B
exocyst complex component 6B
chr6_-_31938700 0.06 ENST00000495340.1
DXO
decapping exoribonuclease
chr22_+_45898712 0.06 ENST00000455233.1
ENST00000348697.2
ENST00000402984.3
ENST00000262722.7
ENST00000327858.6
ENST00000442170.2
ENST00000340923.5
ENST00000439835.1
FBLN1
fibulin 1
chr22_-_28316116 0.06 ENST00000415296.1
PITPNB
phosphatidylinositol transfer protein, beta
chr22_+_37415776 0.06 ENST00000341116.3
ENST00000429360.2
ENST00000404393.1
MPST
mercaptopyruvate sulfurtransferase
chr7_-_37488547 0.05 ENST00000453399.1
ELMO1
engulfment and cell motility 1
chr7_-_128695147 0.05 ENST00000482320.1
ENST00000393245.1
ENST00000471234.1
TNPO3
transportin 3
chr16_+_855443 0.05 ENST00000301698.1
PRR25
proline rich 25
chr17_-_38256973 0.04 ENST00000246672.3
NR1D1
nuclear receptor subfamily 1, group D, member 1
chr11_+_46366918 0.04 ENST00000528615.1
ENST00000395574.3
DGKZ
diacylglycerol kinase, zeta
chr19_+_22235279 0.04 ENST00000594363.1
ENST00000597927.1
ENST00000594947.1
ZNF257
zinc finger protein 257
chr22_+_37415728 0.04 ENST00000404802.3
MPST
mercaptopyruvate sulfurtransferase
chr9_+_101569944 0.04 ENST00000375011.3
GALNT12
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
chr6_+_167525277 0.04 ENST00000400926.2
CCR6
chemokine (C-C motif) receptor 6
chr22_+_37415700 0.03 ENST00000397129.1
MPST
mercaptopyruvate sulfurtransferase
chr19_+_21264980 0.03 ENST00000596053.1
ENST00000597086.1
ENST00000596143.1
ENST00000596367.1
ENST00000601416.1
ZNF714
zinc finger protein 714
chr16_+_77225071 0.03 ENST00000439557.2
ENST00000545553.1
MON1B
MON1 secretory trafficking family member B
chr14_+_50999744 0.03 ENST00000441560.2
ATL1
atlastin GTPase 1
chr17_+_6900201 0.03 ENST00000480801.1
ALOX12
arachidonate 12-lipoxygenase
chr3_-_52002403 0.03 ENST00000490063.1
ENST00000468324.1
ENST00000497653.1
ENST00000484633.1
PCBP4
poly(rC) binding protein 4
chr19_-_58071201 0.03 ENST00000325134.5
ENST00000457177.1
ZNF550
zinc finger protein 550
chr18_-_44336998 0.02 ENST00000315087.7
ST8SIA5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
chr19_-_22605136 0.02 ENST00000357774.5
ENST00000601553.1
ENST00000593657.1
ZNF98
zinc finger protein 98
chr9_-_37592561 0.02 ENST00000544379.1
ENST00000377773.5
ENST00000401811.3
ENST00000321301.6
TOMM5
translocase of outer mitochondrial membrane 5 homolog (yeast)
chr3_-_52002194 0.02 ENST00000466412.1
PCBP4
poly(rC) binding protein 4
chr11_+_46366799 0.02 ENST00000532868.2
DGKZ
diacylglycerol kinase, zeta
chr1_-_197169672 0.02 ENST00000367405.4
ZBTB41
zinc finger and BTB domain containing 41
chr1_+_168545711 0.02 ENST00000367818.3
XCL1
chemokine (C motif) ligand 1
chr4_+_1873100 0.02 ENST00000508803.1
WHSC1
Wolf-Hirschhorn syndrome candidate 1
chr11_-_117170403 0.02 ENST00000504995.1
BACE1
beta-site APP-cleaving enzyme 1
chr6_+_76458909 0.02 ENST00000369981.3
ENST00000369985.4
MYO6
myosin VI
chr11_+_7534999 0.02 ENST00000528947.1
ENST00000299492.4
PPFIBP2
PTPRF interacting protein, binding protein 2 (liprin beta 2)
chr2_+_242755144 0.02 ENST00000428592.1
NEU4
sialidase 4
chr7_+_45039783 0.01 ENST00000258781.6
ENST00000541586.1
ENST00000544363.1
CCM2
cerebral cavernous malformation 2
chr10_-_105156198 0.01 ENST00000369815.1
ENST00000309579.3
ENST00000337003.4
USMG5
up-regulated during skeletal muscle growth 5 homolog (mouse)
chr9_-_131155773 0.01 ENST00000608502.1
MIR219-2
microRNA 219-2
chr1_-_11866034 0.01 ENST00000376590.3
MTHFR
methylenetetrahydrofolate reductase (NAD(P)H)
chr17_+_6899366 0.00 ENST00000251535.6
ALOX12
arachidonate 12-lipoxygenase
chr18_-_5892103 0.00 ENST00000383490.2
TMEM200C
transmembrane protein 200C
chr6_+_76458990 0.00 ENST00000369977.3
MYO6
myosin VI
chr19_+_21203481 0.00 ENST00000595401.1
ZNF430
zinc finger protein 430

Network of associatons between targets according to the STRING database.

First level regulatory network of NR1D1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 GO:1905098 negative regulation of guanyl-nucleotide exchange factor activity(GO:1905098)
0.1 0.2 GO:1903568 negative regulation of protein localization to cilium(GO:1903565) regulation of protein localization to ciliary membrane(GO:1903567) negative regulation of protein localization to ciliary membrane(GO:1903568)
0.1 0.3 GO:0033274 response to vitamin B2(GO:0033274) heterochromatin maintenance(GO:0070829)
0.1 0.2 GO:0072720 cellular response to mycotoxin(GO:0036146) response to dithiothreitol(GO:0072720)
0.1 0.4 GO:2000490 negative regulation of hepatic stellate cell activation(GO:2000490)
0.1 0.2 GO:1900738 positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900738)
0.0 0.3 GO:0070458 cellular detoxification of nitrogen compound(GO:0070458)
0.0 0.8 GO:0002315 marginal zone B cell differentiation(GO:0002315)
0.0 0.1 GO:0051795 apoptotic process involved in outflow tract morphogenesis(GO:0003275) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.0 0.1 GO:0060032 notochord regression(GO:0060032)
0.0 0.2 GO:0097021 lymphocyte migration into lymphoid organs(GO:0097021)
0.0 0.1 GO:0009440 cyanate metabolic process(GO:0009439) cyanate catabolic process(GO:0009440)
0.0 0.2 GO:0008063 Toll signaling pathway(GO:0008063)
0.0 0.5 GO:0045116 protein neddylation(GO:0045116)
0.0 0.1 GO:0050894 determination of affect(GO:0050894)
0.0 0.0 GO:2000538 regulation of B cell chemotaxis(GO:2000537) positive regulation of B cell chemotaxis(GO:2000538)
0.0 0.1 GO:0016476 regulation of embryonic cell shape(GO:0016476)
0.0 0.2 GO:0032494 response to peptidoglycan(GO:0032494)
0.0 0.1 GO:0019626 short-chain fatty acid catabolic process(GO:0019626)
0.0 0.0 GO:0060086 circadian temperature homeostasis(GO:0060086)
0.0 0.1 GO:0046985 positive regulation of hemoglobin biosynthetic process(GO:0046985)
0.0 0.1 GO:2000124 regulation of endocannabinoid signaling pathway(GO:2000124)
0.0 0.0 GO:0060474 positive regulation of sperm motility involved in capacitation(GO:0060474)
0.0 0.7 GO:0097178 ruffle assembly(GO:0097178)
0.0 0.0 GO:0019085 early viral transcription(GO:0019085)
0.0 0.1 GO:0035865 cellular response to potassium ion(GO:0035865)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
0.1 0.4 GO:0047888 fatty acid peroxidase activity(GO:0047888)
0.1 0.3 GO:0004803 transposase activity(GO:0004803)
0.1 0.3 GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity(GO:0004489)
0.0 0.3 GO:0008273 calcium, potassium:sodium antiporter activity(GO:0008273)
0.0 0.1 GO:0016784 3-mercaptopyruvate sulfurtransferase activity(GO:0016784)
0.0 0.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.0 0.1 GO:0031877 somatostatin receptor binding(GO:0031877)
0.0 0.5 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:0034353 RNA pyrophosphohydrolase activity(GO:0034353)
0.0 0.2 GO:0070053 thrombospondin receptor activity(GO:0070053)
0.0 0.1 GO:0015226 amino-acid betaine transmembrane transporter activity(GO:0015199) carnitine transmembrane transporter activity(GO:0015226)
0.0 0.3 GO:0043295 glutathione binding(GO:0043295)
0.0 0.1 GO:0030274 LIM domain binding(GO:0030274)
0.0 0.1 GO:0070051 fibrinogen binding(GO:0070051)
0.0 0.7 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.0 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.3 GO:0008349 MAP kinase kinase kinase kinase activity(GO:0008349)
0.0 0.0 GO:0047860 diiodophenylpyruvate reductase activity(GO:0047860)
0.0 0.2 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 PID P38 GAMMA DELTA PATHWAY Signaling mediated by p38-gamma and p38-delta

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 REACTOME PRE NOTCH PROCESSING IN GOLGI Genes involved in Pre-NOTCH Processing in Golgi
0.0 0.3 REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING Genes involved in Formation of ATP by chemiosmotic coupling
0.0 0.2 REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins