ISMARA results: UGUGCGU

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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for UGUGCGU

Z-value: 0.19

Motif logo

miRNA associated with seed UGUGCGU

Name	miRBASE accession
hsa-miR-210-3p miRBase	MIMAT0000267

Activity profile of UGUGCGU motif

Sorted Z-values of UGUGCGU motif

Top targets:

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr8_+_27491572 Show fit	0.20	ENST00000301904.3	SCARA3 Ensembl NCBI GeneCards UniProt Show fit	scavenger receptor class A, member 3
chr17_-_74533963 Show fit	0.09	ENST00000293230.5	CYGB Ensembl NCBI GeneCards UniProt Show fit	cytoglobin
chr4_+_15004165 Show fit	0.04	ENST00000538197.1 ENST00000541112.1 ENST00000442003.2	CPEB2 Ensembl NCBI GeneCards UniProt Show fit	cytoplasmic polyadenylation element binding protein 2
chr3_+_32147997 Show fit	0.04	ENST00000282541.5	GPD1L Ensembl NCBI GeneCards UniProt Show fit	glycerol-3-phosphate dehydrogenase 1-like
chr5_-_132113036 Show fit	0.01	ENST00000378706.1	SEPT8 Ensembl NCBI GeneCards UniProt Show fit	septin 8
chr12_-_111021110 Show fit	0.01	ENST00000354300.3	PPTC7 Ensembl NCBI GeneCards UniProt Show fit	PTC7 protein phosphatase homolog (S. cerevisiae)
chr19_+_46800289 Show fit	0.01	ENST00000377670.4	HIF3A Ensembl NCBI GeneCards UniProt Show fit	hypoxia inducible factor 3, alpha subunit
chr6_+_33387868 Show fit	0.01	ENST00000418600.2	SYNGAP1 Ensembl NCBI GeneCards UniProt Show fit	synaptic Ras GTPase activating protein 1
chr12_+_113495492 Show fit	0.01	ENST00000257600.3	DTX1 Ensembl NCBI GeneCards UniProt Show fit	deltex homolog 1 (Drosophila)
chr7_-_10979750 Show fit	0.00	ENST00000339600.5	NDUFA4 Ensembl NCBI GeneCards UniProt Show fit	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa

Showing 1 to 10 of 11 entries

Network of associatons between targets according to the STRING database.

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:2000490	negative regulation of hepatic stellate cell activation(GO:2000490)
0.0	0.0	GO:0046168	glycerol-3-phosphate catabolic process(GO:0046168)
0.0	0.0	GO:0002182	cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)

Showing 1 to 3 of 3 entries

Gene overrepresentation in molecular_function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0047888	fatty acid peroxidase activity(GO:0047888)
0.0	0.0	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)

Showing 1 to 2 of 2 entries