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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for AGCAGCG

Z-value: 0.18

Motif logo

miRNA associated with seed AGCAGCG

NamemiRBASE accession
MIMAT0002874

Activity profile of AGCAGCG motif

Sorted Z-values of AGCAGCG motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_+_47799446 0.10 ENST00000371873.5
cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
chr3_+_187930719 0.10 ENST00000312675.4
LIM domain containing preferred translocation partner in lipoma
chr2_+_46926048 0.10 ENST00000306503.5
suppressor of cytokine signaling 5
chr13_-_27745936 0.10 ENST00000282344.6
ubiquitin specific peptidase 12
chr2_+_198380289 0.10 ENST00000233892.4
ENST00000409916.1
MOB family member 4, phocein
chr18_+_29671812 0.09 ENST00000261593.3
ENST00000578914.1
ring finger protein 138, E3 ubiquitin protein ligase
chr5_+_157170703 0.08 ENST00000286307.5
LSM11, U7 small nuclear RNA associated
chr10_+_18948311 0.08 ENST00000377275.3
ADP-ribosylation factor-like 5B
chr17_+_68165657 0.08 ENST00000243457.3
potassium inwardly-rectifying channel, subfamily J, member 2
chr13_-_21476900 0.08 ENST00000400602.2
ENST00000255305.6
exportin 4
chr17_-_45266542 0.07 ENST00000531206.1
ENST00000527547.1
ENST00000446365.2
ENST00000575483.1
ENST00000066544.3
cell division cycle 27
chr4_-_78740511 0.07 ENST00000504123.1
ENST00000264903.4
ENST00000515441.1
CCR4-NOT transcription complex, subunit 6-like
chr12_+_66217911 0.07 ENST00000403681.2
high mobility group AT-hook 2
chr9_-_3525968 0.07 ENST00000382004.3
ENST00000302303.1
ENST00000449190.1
regulatory factor X, 3 (influences HLA class II expression)
chr14_+_53196872 0.07 ENST00000442123.2
ENST00000354586.4
serine/threonine/tyrosine interacting protein
chr14_+_31028329 0.07 ENST00000206595.6
G2/M-phase specific E3 ubiquitin protein ligase
chr2_-_219925189 0.07 ENST00000295731.6
indian hedgehog
chr7_+_36429409 0.07 ENST00000265748.2
anillin, actin binding protein
chr15_-_52861394 0.06 ENST00000563277.1
ENST00000566423.1
cAMP-regulated phosphoprotein, 19kDa
chr4_+_140222609 0.06 ENST00000296543.5
ENST00000398947.1
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
chr2_+_203879568 0.06 ENST00000449802.1
neurobeachin-like 1
chr6_+_71122974 0.06 ENST00000418814.2
family with sequence similarity 135, member A
chr11_+_9406169 0.06 ENST00000379719.3
ENST00000527431.1
importin 7
chr5_+_78908233 0.06 ENST00000453514.1
ENST00000423041.2
ENST00000504233.1
ENST00000428308.2
PAP associated domain containing 4
chr12_-_39837192 0.06 ENST00000361961.3
ENST00000395670.3
kinesin family member 21A
chr13_+_20532807 0.06 ENST00000382869.3
ENST00000382881.3
zinc finger, MYM-type 2
chr2_+_201676256 0.06 ENST00000452206.1
ENST00000410110.2
ENST00000409600.1
basic leucine zipper and W2 domains 1
chr2_-_180129484 0.06 ENST00000428443.3
SEC14 and spectrin domains 1
chr9_-_127905736 0.06 ENST00000336505.6
ENST00000373549.4
suppressor of cancer cell invasion
chr8_+_25316489 0.06 ENST00000330560.3
cell division cycle associated 2
chr18_+_67956135 0.05 ENST00000397942.3
suppressor of cytokine signaling 6
chr10_+_88516396 0.05 ENST00000372037.3
bone morphogenetic protein receptor, type IA
chr7_+_90032667 0.05 ENST00000496677.1
ENST00000287916.4
ENST00000535571.1
ENST00000394604.1
ENST00000394605.2
claudin 12
chr11_-_74109422 0.05 ENST00000298198.4
phosphoglucomutase 2-like 1
chrX_+_41192595 0.05 ENST00000399959.2
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr13_+_97874574 0.05 ENST00000343600.4
ENST00000345429.6
ENST00000376673.3
muscleblind-like splicing regulator 2
chr1_+_24286287 0.05 ENST00000334351.7
ENST00000374468.1
proline-rich nuclear receptor coactivator 2
chr4_+_128703295 0.05 ENST00000296464.4
ENST00000508549.1
heat shock 70kDa protein 4-like
chr5_+_127419449 0.05 ENST00000262461.2
ENST00000343225.4
solute carrier family 12 (sodium/potassium/chloride transporter), member 2
chr21_+_17102311 0.05 ENST00000285679.6
ENST00000351097.5
ENST00000285681.2
ENST00000400183.2
ubiquitin specific peptidase 25
chr4_-_99851766 0.05 ENST00000450253.2
eukaryotic translation initiation factor 4E
chr13_-_50367057 0.05 ENST00000261667.3
karyopherin alpha 3 (importin alpha 4)
chr1_+_65613217 0.05 ENST00000545314.1
adenylate kinase 4
chr1_-_207224307 0.05 ENST00000315927.4
YOD1 deubiquitinase
chr5_+_65440032 0.05 ENST00000334121.6
splicing regulatory glutamine/lysine-rich protein 1
chr1_+_78245303 0.05 ENST00000370791.3
ENST00000443751.2
family with sequence similarity 73, member A
chr6_+_47445467 0.05 ENST00000359314.5
CD2-associated protein
chr7_+_77166592 0.05 ENST00000248594.6
protein tyrosine phosphatase, non-receptor type 12
chr2_+_198365122 0.05 ENST00000604458.1
HSPE1-MOB4 readthrough
chr12_+_8850471 0.05 ENST00000535829.1
ENST00000357529.3
ribosomal modification protein rimK-like family member B
chr9_+_36036430 0.04 ENST00000377966.3
reversion-inducing-cysteine-rich protein with kazal motifs
chr2_-_172017343 0.04 ENST00000431350.2
ENST00000360843.3
tousled-like kinase 1
chr1_-_244013384 0.04 ENST00000366539.1
v-akt murine thymoma viral oncogene homolog 3
chr20_-_1165117 0.04 ENST00000381894.3
transmembrane protein 74B
chr5_+_67511524 0.04 ENST00000521381.1
ENST00000521657.1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chrX_+_95939711 0.04 ENST00000373049.4
ENST00000324765.8
diaphanous-related formin 2
chr18_-_61034743 0.04 ENST00000406396.3
3-ketodihydrosphingosine reductase
chr10_+_95653687 0.04 ENST00000371408.3
ENST00000427197.1
solute carrier family 35, member G1
chr1_+_162467595 0.04 ENST00000538489.1
ENST00000489294.1
U2AF homology motif (UHM) kinase 1
chrY_+_15016725 0.04 ENST00000336079.3
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr1_+_184356188 0.04 ENST00000235307.6
chromosome 1 open reading frame 21
chr1_+_110091189 0.04 ENST00000369851.4
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
chr17_-_62658186 0.04 ENST00000262435.9
SMAD specific E3 ubiquitin protein ligase 2
chr5_+_130599735 0.04 ENST00000503291.1
ENST00000360515.3
ENST00000505065.1
CDC42 small effector 2
chr2_+_120517174 0.04 ENST00000263708.2
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
chr16_+_53088885 0.04 ENST00000566029.1
ENST00000447540.1
chromodomain helicase DNA binding protein 9
chr6_+_127439749 0.04 ENST00000356698.4
R-spondin 3
chrX_+_128674213 0.04 ENST00000371113.4
ENST00000357121.5
oculocerebrorenal syndrome of Lowe
chr4_+_123747834 0.04 ENST00000264498.3
fibroblast growth factor 2 (basic)
chr9_+_4679555 0.03 ENST00000381858.1
ENST00000381854.3
cell division cycle 37-like 1
chr17_+_65821780 0.03 ENST00000321892.4
ENST00000335221.5
ENST00000306378.6
bromodomain PHD finger transcription factor
chr4_+_166794383 0.03 ENST00000061240.2
ENST00000507499.1
tolloid-like 1
chr16_-_47007545 0.03 ENST00000317089.5
DnaJ (Hsp40) homolog, subfamily A, member 2
chr6_-_134639180 0.03 ENST00000367858.5
serum/glucocorticoid regulated kinase 1
chr14_-_31676964 0.03 ENST00000553700.1
HECT domain containing E3 ubiquitin protein ligase 1
chr5_-_54830784 0.03 ENST00000264775.5
phosphatidic acid phosphatase type 2A
chr2_-_46385 0.03 ENST00000327669.4
family with sequence similarity 110, member C
chr15_+_38544476 0.03 ENST00000299084.4
sprouty-related, EVH1 domain containing 1
chr5_+_72794233 0.03 ENST00000335895.8
ENST00000380591.3
ENST00000507081.2
basic transcription factor 3
chrX_-_83442915 0.03 ENST00000262752.2
ENST00000543399.1
ribosomal protein S6 kinase, 90kDa, polypeptide 6
chr11_+_111807863 0.03 ENST00000440460.2
DIX domain containing 1
chr1_+_39456895 0.03 ENST00000432648.3
ENST00000446189.2
ENST00000372984.4
akirin 1
chr12_+_52203789 0.03 ENST00000599343.1
HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
chr4_-_76944621 0.03 ENST00000306602.1
chemokine (C-X-C motif) ligand 10
chr3_-_120170052 0.03 ENST00000295633.3
follistatin-like 1
chr1_+_203764742 0.03 ENST00000432282.1
ENST00000453771.1
ENST00000367214.1
ENST00000367212.3
ENST00000332127.4
zinc finger CCCH-type containing 11A
chr5_+_172483347 0.02 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
CREB3 regulatory factor
chr15_+_69706585 0.02 ENST00000559279.1
ENST00000395392.2
kinesin family member 23
chr10_+_112631547 0.02 ENST00000280154.7
ENST00000393104.2
programmed cell death 4 (neoplastic transformation inhibitor)
chr2_+_208576355 0.02 ENST00000420822.1
ENST00000295414.3
ENST00000339882.5
cyclin Y-like 1
chr2_+_170683942 0.02 ENST00000272793.5
ubiquitin protein ligase E3 component n-recognin 3 (putative)
chr10_+_103113802 0.02 ENST00000370187.3
beta-transducin repeat containing E3 ubiquitin protein ligase
chr12_-_54673871 0.02 ENST00000209875.4
chromobox homolog 5
chr8_-_67525473 0.02 ENST00000522677.3
v-myb avian myeloblastosis viral oncogene homolog-like 1
chr17_-_5487768 0.02 ENST00000269280.4
ENST00000345221.3
ENST00000262467.5
NLR family, pyrin domain containing 1
chr16_+_58549378 0.02 ENST00000310682.2
ENST00000394266.4
ENST00000219315.4
SET domain containing 6
chr20_+_19193269 0.02 ENST00000328041.6
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
chr16_-_23160591 0.02 ENST00000219689.7
ubiquitin specific peptidase 31
chr2_+_149632783 0.02 ENST00000435030.1
kinesin family member 5C
chr1_+_2160134 0.02 ENST00000378536.4
v-ski avian sarcoma viral oncogene homolog
chr3_+_49977440 0.02 ENST00000442092.1
ENST00000266022.4
ENST00000443081.1
RNA binding motif protein 6
chr3_-_129407535 0.02 ENST00000432054.2
transmembrane and coiled-coil domain family 1
chr1_-_85666688 0.02 ENST00000341460.5
synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
chr9_-_112083229 0.02 ENST00000374566.3
ENST00000374557.4
erythrocyte membrane protein band 4.1 like 4B
chr12_-_117628333 0.02 ENST00000427718.2
F-box protein 21
chr8_-_57123815 0.02 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
pleiomorphic adenoma gene 1
chr20_-_52210368 0.02 ENST00000371471.2
zinc finger protein 217
chr15_+_74466012 0.02 ENST00000249842.3
immunoglobulin superfamily containing leucine-rich repeat
chr10_-_61666267 0.02 ENST00000263102.6
coiled-coil domain containing 6
chr20_+_49348081 0.02 ENST00000371610.2
par-6 family cell polarity regulator beta
chr6_+_18387570 0.02 ENST00000259939.3
ring finger protein 144B
chr17_-_65241281 0.02 ENST00000358691.5
ENST00000580168.1
helicase with zinc finger
chr22_+_45559722 0.02 ENST00000347635.4
ENST00000407019.2
ENST00000424634.1
ENST00000417702.1
ENST00000425733.2
ENST00000430547.1
nucleoporin 50kDa
chr5_+_95997918 0.02 ENST00000395812.2
ENST00000395813.1
ENST00000359176.4
ENST00000325674.7
calpastatin
chr3_+_43328004 0.02 ENST00000454177.1
ENST00000429705.2
ENST00000296088.7
ENST00000437827.1
SNF related kinase
chr12_-_8088871 0.02 ENST00000075120.7
solute carrier family 2 (facilitated glucose transporter), member 3
chr5_-_39074479 0.02 ENST00000514735.1
ENST00000296782.5
ENST00000357387.3
RPTOR independent companion of MTOR, complex 2
chr10_-_75255724 0.02 ENST00000342558.3
ENST00000360663.5
ENST00000394829.2
ENST00000394828.2
ENST00000394822.2
protein phosphatase 3, catalytic subunit, beta isozyme
chr4_+_15004165 0.02 ENST00000538197.1
ENST00000541112.1
ENST00000442003.2
cytoplasmic polyadenylation element binding protein 2
chr15_+_59063478 0.02 ENST00000559228.1
ENST00000450403.2
family with sequence similarity 63, member B
chr10_-_119134918 0.02 ENST00000334464.5
PDZ domain containing 8
chr6_+_147525541 0.01 ENST00000367481.3
ENST00000546097.1
syntaxin binding protein 5 (tomosyn)
chr5_+_133984462 0.01 ENST00000398844.2
ENST00000322887.4
SEC24 family member A
chr15_+_49715293 0.01 ENST00000267843.4
ENST00000560270.1
fibroblast growth factor 7
chr5_+_102201430 0.01 ENST00000438793.3
ENST00000346918.2
peptidylglycine alpha-amidating monooxygenase
chr13_+_26828275 0.01 ENST00000381527.3
cyclin-dependent kinase 8
chr17_+_57232690 0.01 ENST00000262293.4
proline rich 11
chr10_-_120514720 0.01 ENST00000369151.3
ENST00000340214.4
CDK2-associated, cullin domain 1
chr3_-_178790057 0.01 ENST00000311417.2
zinc finger, matrin-type 3
chr16_+_22019404 0.01 ENST00000542527.2
ENST00000569656.1
ENST00000562695.1
chromosome 16 open reading frame 52
chr11_+_117014983 0.01 ENST00000527958.1
ENST00000419197.2
ENST00000304808.6
ENST00000529887.2
platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
chr1_-_48462566 0.01 ENST00000606738.2
TraB domain containing 2B
chr2_-_37193606 0.01 ENST00000379213.2
ENST00000263918.4
striatin, calmodulin binding protein
chr5_+_167181917 0.01 ENST00000519204.1
teneurin transmembrane protein 2
chr20_-_62462566 0.01 ENST00000245663.4
ENST00000302995.2
zinc finger and BTB domain containing 46
chr2_+_113033164 0.01 ENST00000409871.1
ENST00000343936.4
zinc finger CCCH-type containing 6
chrX_+_134478706 0.01 ENST00000370761.3
ENST00000339249.4
ENST00000370760.3
zinc finger protein 449
chr8_+_21777159 0.01 ENST00000434536.1
ENST00000252512.9
exportin 7
chr1_+_167190066 0.01 ENST00000367866.2
ENST00000429375.2
ENST00000452019.1
ENST00000420254.3
ENST00000541643.3
POU class 2 homeobox 1
chr11_+_125496124 0.01 ENST00000533778.2
ENST00000534070.1
checkpoint kinase 1
chr12_-_8025442 0.01 ENST00000340749.5
ENST00000535295.1
ENST00000539234.1
solute carrier family 2 (facilitated glucose transporter), member 14
chr3_-_120068143 0.01 ENST00000295628.3
leucine rich repeat containing 58
chr6_-_44265411 0.01 ENST00000371505.4
t-complex-associated-testis-expressed 1
chr5_+_140560980 0.01 ENST00000361016.2
protocadherin beta 16
chr9_+_118916082 0.01 ENST00000328252.3
pregnancy-associated plasma protein A, pappalysin 1
chr6_+_41040678 0.01 ENST00000341376.6
ENST00000353205.5
nuclear transcription factor Y, alpha
chr2_-_55237484 0.01 ENST00000394609.2
reticulon 4
chr3_+_188889737 0.01 ENST00000345063.3
tumor protein p63 regulated 1
chr19_-_51141196 0.01 ENST00000338916.4
synaptotagmin III
chr18_-_60987220 0.01 ENST00000398117.1
B-cell CLL/lymphoma 2
chr6_+_163835669 0.01 ENST00000453779.2
ENST00000275262.7
ENST00000392127.2
ENST00000361752.3
QKI, KH domain containing, RNA binding
chr11_+_77300669 0.01 ENST00000313578.3
aquaporin 11
chr4_-_153457197 0.01 ENST00000281708.4
F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
chr9_+_82186872 0.01 ENST00000376544.3
ENST00000376520.4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr2_+_168725458 0.01 ENST00000392690.3
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
chr1_-_24306798 0.01 ENST00000374452.5
ENST00000492112.2
ENST00000343255.5
ENST00000344989.6
serine/arginine-rich splicing factor 10
chr1_-_155532484 0.01 ENST00000368346.3
ENST00000548830.1
ash1 (absent, small, or homeotic)-like (Drosophila)
chr5_+_151151471 0.01 ENST00000394123.3
ENST00000543466.1
GTPase activating protein (SH3 domain) binding protein 1
chr1_+_113010056 0.00 ENST00000369686.5
wingless-type MMTV integration site family, member 2B
chr3_+_10857885 0.00 ENST00000254488.2
ENST00000454147.1
solute carrier family 6 (neurotransmitter transporter), member 11
chr1_+_228194693 0.00 ENST00000284523.1
ENST00000366753.2
wingless-type MMTV integration site family, member 3A
chr10_+_93683519 0.00 ENST00000265990.6
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
chr4_+_25235597 0.00 ENST00000264864.6
phosphatidylinositol 4-kinase type 2 beta
chr5_+_140165876 0.00 ENST00000504120.2
ENST00000394633.3
ENST00000378133.3
protocadherin alpha 1
chr13_-_46961580 0.00 ENST00000378787.3
ENST00000378797.2
ENST00000429979.1
ENST00000378781.3
KIAA0226-like
chr5_-_95297678 0.00 ENST00000237853.4
elongation factor, RNA polymerase II, 2
chr1_+_15853308 0.00 ENST00000375838.1
ENST00000375847.3
ENST00000375849.1
DnaJ (Hsp40) homolog, subfamily C, member 16
chr12_+_54891495 0.00 ENST00000293373.6
NCK-associated protein 1-like
chr3_+_38495333 0.00 ENST00000352511.4
activin A receptor, type IIB
chr11_+_64781575 0.00 ENST00000246747.4
ENST00000529384.1
ADP-ribosylation factor-like 2
chr17_-_1359443 0.00 ENST00000574295.1
ENST00000398970.5
ENST00000300574.2
v-crk avian sarcoma virus CT10 oncogene homolog
chr9_-_16870704 0.00 ENST00000380672.4
ENST00000380667.2
ENST00000380666.2
ENST00000486514.1
basonuclin 2
chr3_-_13921594 0.00 ENST00000285018.4
wingless-type MMTV integration site family, member 7A
chr2_+_61244697 0.00 ENST00000401576.1
ENST00000295030.5
ENST00000414712.2
peroxisomal biogenesis factor 13
chr6_-_94129244 0.00 ENST00000369303.4
ENST00000369297.1
EPH receptor A7

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCAGCG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016539 intein-mediated protein splicing(GO:0016539) protein splicing(GO:0030908)
0.0 0.1 GO:0000921 septin ring assembly(GO:0000921) septin ring organization(GO:0031106)
0.0 0.1 GO:2000685 mesodermal-endodermal cell signaling(GO:0003131) programmed DNA elimination(GO:0031049) chromosome breakage(GO:0031052) histone H2A-S139 phosphorylation(GO:0035978) positive regulation of cellular response to X-ray(GO:2000685)
0.0 0.1 GO:0070634 transepithelial ammonium transport(GO:0070634)
0.0 0.1 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.0 0.2 GO:0046940 nucleoside monophosphate phosphorylation(GO:0046940)
0.0 0.1 GO:0002071 glandular epithelial cell maturation(GO:0002071) type B pancreatic cell maturation(GO:0072560)
0.0 0.1 GO:0048372 lateral mesodermal cell fate commitment(GO:0048372) lateral mesodermal cell fate specification(GO:0048377) regulation of lateral mesodermal cell fate specification(GO:0048378)
0.0 0.0 GO:0042660 positive regulation of cell fate specification(GO:0042660)
0.0 0.0 GO:1990167 protein K27-linked deubiquitination(GO:1990167) protein K33-linked deubiquitination(GO:1990168)
0.0 0.1 GO:0045629 negative regulation of T-helper 2 cell differentiation(GO:0045629)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379)
0.0 0.1 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)
0.0 0.1 GO:0005826 actomyosin contractile ring(GO:0005826)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0009041 uridylate kinase activity(GO:0009041)
0.0 0.1 GO:1904455 ubiquitin-specific protease activity involved in negative regulation of ERAD pathway(GO:1904455)
0.0 0.1 GO:0071209 U7 snRNA binding(GO:0071209)
0.0 0.1 GO:0035501 MH1 domain binding(GO:0035501)
0.0 0.0 GO:0072591 citrate-L-glutamate ligase activity(GO:0072591)