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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for CUGGCUG

Z-value: 1.00

Motif logo

logo of

miRNA associated with seed CUGGCUG

NamemiRBASE accession
hsa-miR-3064-5p
MIMAT0019864
hsa-miR-6504-5p
MIMAT0025464

Activity profile of CUGGCUG motif

Sorted Z-values of CUGGCUG motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_+_50606577 0.55 ENST00000434410.1
ENST00000232854.4
HEMK1
HemK methyltransferase family member 1
chr16_-_86588627 0.41 ENST00000565482.1
ENST00000564364.1
ENST00000561989.1
ENST00000543303.2
ENST00000381214.5
ENST00000360900.6
ENST00000322911.6
ENST00000546093.1
ENST00000569000.1
ENST00000562994.1
ENST00000561522.1
MTHFSD
methenyltetrahydrofolate synthetase domain containing
chr11_+_118477144 0.32 ENST00000361417.2
PHLDB1
pleckstrin homology-like domain, family B, member 1
chr10_+_73724123 0.29 ENST00000373115.4
CHST3
carbohydrate (chondroitin 6) sulfotransferase 3
chr19_+_34287751 0.29 ENST00000590771.1
ENST00000589786.1
ENST00000284006.6
ENST00000588881.1
KCTD15
potassium channel tetramerization domain containing 15
chr5_+_149887672 0.28 ENST00000261797.6
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr1_+_160175117 0.27 ENST00000360472.4
PEA15
phosphoprotein enriched in astrocytes 15
chr11_+_45868957 0.27 ENST00000443527.2
CRY2
cryptochrome 2 (photolyase-like)
chr8_-_9008206 0.26 ENST00000310455.3
PPP1R3B
protein phosphatase 1, regulatory subunit 3B
chr19_+_41816053 0.26 ENST00000269967.3
CCDC97
coiled-coil domain containing 97
chr1_-_161059380 0.26 ENST00000368012.3
PVRL4
poliovirus receptor-related 4
chr14_+_23067146 0.25 ENST00000428304.2
ABHD4
abhydrolase domain containing 4
chr7_+_140774032 0.24 ENST00000565468.1
TMEM178B
transmembrane protein 178B
chr10_-_81965307 0.24 ENST00000537102.1
ENST00000372231.3
ENST00000438331.1
ENST00000422982.3
ENST00000360615.4
ENST00000265447.4
ANXA11
annexin A11
chr17_-_78009647 0.24 ENST00000310924.2
TBC1D16
TBC1 domain family, member 16
chr12_-_49449107 0.22 ENST00000301067.7
KMT2D
lysine (K)-specific methyltransferase 2D
chr9_+_116917807 0.22 ENST00000356083.3
COL27A1
collagen, type XXVII, alpha 1
chr14_-_77787198 0.22 ENST00000261534.4
POMT2
protein-O-mannosyltransferase 2
chr1_+_150122034 0.22 ENST00000025469.6
ENST00000369124.4
PLEKHO1
pleckstrin homology domain containing, family O member 1
chr1_-_1624083 0.21 ENST00000378662.1
ENST00000234800.6
SLC35E2B
solute carrier family 35, member E2B
chr11_-_72504637 0.21 ENST00000536377.1
ENST00000359373.5
STARD10
ARAP1
StAR-related lipid transfer (START) domain containing 10
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr1_+_206557366 0.21 ENST00000414007.1
ENST00000419187.2
SRGAP2
SLIT-ROBO Rho GTPase activating protein 2
chr21_-_43346790 0.21 ENST00000329623.7
C2CD2
C2 calcium-dependent domain containing 2
chr2_+_105471969 0.21 ENST00000361360.2
POU3F3
POU class 3 homeobox 3
chr22_-_38669030 0.20 ENST00000361906.3
TMEM184B
transmembrane protein 184B
chr10_-_105615164 0.20 ENST00000355946.2
ENST00000369774.4
SH3PXD2A
SH3 and PX domains 2A
chr11_+_126173647 0.20 ENST00000263579.4
DCPS
decapping enzyme, scavenger
chr20_+_306221 0.19 ENST00000342665.2
SOX12
SRY (sex determining region Y)-box 12
chr1_+_36348790 0.19 ENST00000373204.4
AGO1
argonaute RISC catalytic component 1
chr8_-_81787006 0.19 ENST00000327835.3
ZNF704
zinc finger protein 704
chr5_+_133861790 0.19 ENST00000395003.1
PHF15
jade family PHD finger 2
chr8_-_141645645 0.18 ENST00000519980.1
ENST00000220592.5
AGO2
argonaute RISC catalytic component 2
chr10_-_106098162 0.18 ENST00000337478.1
ITPRIP
inositol 1,4,5-trisphosphate receptor interacting protein
chr1_+_32645269 0.17 ENST00000373610.3
TXLNA
taxilin alpha
chr4_+_77356248 0.17 ENST00000296043.6
SHROOM3
shroom family member 3
chr20_+_34700333 0.17 ENST00000441639.1
EPB41L1
erythrocyte membrane protein band 4.1-like 1
chr8_+_21946681 0.17 ENST00000289921.7
FAM160B2
family with sequence similarity 160, member B2
chrX_+_9431324 0.17 ENST00000407597.2
ENST00000424279.1
ENST00000536365.1
ENST00000441088.1
ENST00000380961.1
ENST00000415293.1
TBL1X
transducin (beta)-like 1X-linked
chr1_+_110453203 0.16 ENST00000357302.4
ENST00000344188.5
ENST00000329608.6
CSF1
colony stimulating factor 1 (macrophage)
chr20_-_1472029 0.16 ENST00000359801.3
SIRPB2
signal-regulatory protein beta 2
chr2_-_69870835 0.16 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr17_-_38721711 0.16 ENST00000578085.1
ENST00000246657.2
CCR7
chemokine (C-C motif) receptor 7
chr12_+_123319973 0.16 ENST00000253083.4
HIP1R
huntingtin interacting protein 1 related
chr1_-_1677358 0.15 ENST00000355439.2
ENST00000400924.1
ENST00000246421.4
SLC35E2
solute carrier family 35, member E2
chr17_+_61699766 0.15 ENST00000579585.1
ENST00000584573.1
ENST00000361733.3
ENST00000361357.3
MAP3K3
mitogen-activated protein kinase kinase kinase 3
chr11_-_73309228 0.15 ENST00000356467.4
ENST00000064778.4
FAM168A
family with sequence similarity 168, member A
chr20_+_32581452 0.15 ENST00000375114.3
ENST00000448364.1
RALY
RALY heterogeneous nuclear ribonucleoprotein
chr9_+_124413873 0.15 ENST00000408936.3
DAB2IP
DAB2 interacting protein
chr17_-_4607335 0.15 ENST00000570571.1
ENST00000575101.1
ENST00000436683.2
ENST00000574876.1
PELP1
proline, glutamate and leucine rich protein 1
chr15_+_75498355 0.15 ENST00000567617.1
C15orf39
chromosome 15 open reading frame 39
chr9_+_129376722 0.15 ENST00000526117.1
ENST00000373474.4
ENST00000355497.5
ENST00000425646.2
ENST00000561065.1
LMX1B
LIM homeobox transcription factor 1, beta
chr1_-_112281875 0.15 ENST00000527621.1
ENST00000534365.1
ENST00000357260.5
FAM212B
family with sequence similarity 212, member B
chr19_+_3359561 0.14 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
NFIC
nuclear factor I/C (CCAAT-binding transcription factor)
chr2_+_131113580 0.14 ENST00000175756.5
PTPN18
protein tyrosine phosphatase, non-receptor type 18 (brain-derived)
chr20_-_48099182 0.14 ENST00000371741.4
KCNB1
potassium voltage-gated channel, Shab-related subfamily, member 1
chr6_+_42981922 0.14 ENST00000326974.4
ENST00000244670.8
KLHDC3
kelch domain containing 3
chr5_+_177540444 0.13 ENST00000274605.5
N4BP3
NEDD4 binding protein 3
chr14_+_70078303 0.13 ENST00000342745.4
KIAA0247
KIAA0247
chr1_-_26633067 0.13 ENST00000421827.2
ENST00000374215.1
ENST00000374223.1
ENST00000357089.4
ENST00000535108.1
ENST00000314675.7
ENST00000436301.2
ENST00000423664.1
ENST00000374221.3
UBXN11
UBX domain protein 11
chr1_-_17766198 0.13 ENST00000375436.4
RCC2
regulator of chromosome condensation 2
chr22_-_30234218 0.13 ENST00000307790.3
ENST00000542393.1
ENST00000397771.2
ASCC2
activating signal cointegrator 1 complex subunit 2
chr9_-_91793675 0.13 ENST00000375835.4
ENST00000375830.1
SHC3
SHC (Src homology 2 domain containing) transforming protein 3
chrX_+_47077632 0.13 ENST00000457458.2
CDK16
cyclin-dependent kinase 16
chr6_-_44281043 0.13 ENST00000244571.4
AARS2
alanyl-tRNA synthetase 2, mitochondrial
chr1_-_26372602 0.13 ENST00000374278.3
ENST00000374276.3
SLC30A2
solute carrier family 30 (zinc transporter), member 2
chr12_-_56652111 0.13 ENST00000267116.7
ANKRD52
ankyrin repeat domain 52
chr2_+_134877740 0.12 ENST00000409645.1
MGAT5
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
chr22_-_43010928 0.12 ENST00000348657.2
ENST00000252115.5
POLDIP3
polymerase (DNA-directed), delta interacting protein 3
chr17_-_18266797 0.12 ENST00000316694.3
ENST00000539052.1
SHMT1
serine hydroxymethyltransferase 1 (soluble)
chr5_+_148521046 0.12 ENST00000326685.7
ENST00000356541.3
ENST00000309868.7
ABLIM3
actin binding LIM protein family, member 3
chr11_-_64684672 0.11 ENST00000377264.3
ENST00000421419.2
ATG2A
autophagy related 2A
chr1_+_153700518 0.11 ENST00000318967.2
ENST00000456435.1
ENST00000435409.2
INTS3
integrator complex subunit 3
chr14_+_65171099 0.11 ENST00000247226.7
PLEKHG3
pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr16_+_31085714 0.11 ENST00000300850.5
ENST00000564189.1
ENST00000428260.1
ZNF646
zinc finger protein 646
chr17_-_17875688 0.11 ENST00000379504.3
ENST00000318094.10
ENST00000540946.1
ENST00000542206.1
ENST00000395739.4
ENST00000581396.1
ENST00000535933.1
ENST00000579586.1
TOM1L2
target of myb1-like 2 (chicken)
chr11_+_123396528 0.11 ENST00000322282.7
ENST00000529750.1
GRAMD1B
GRAM domain containing 1B
chr6_+_36853607 0.11 ENST00000480824.2
ENST00000355190.3
ENST00000373685.1
C6orf89
chromosome 6 open reading frame 89
chr16_-_4588822 0.11 ENST00000564828.1
CDIP1
cell death-inducing p53 target 1
chr11_-_67236691 0.11 ENST00000544903.1
ENST00000308022.2
ENST00000393877.3
ENST00000452789.2
TMEM134
transmembrane protein 134
chr16_-_85045131 0.11 ENST00000313732.4
ZDHHC7
zinc finger, DHHC-type containing 7
chr19_-_15560730 0.10 ENST00000389282.4
ENST00000263381.7
WIZ
widely interspaced zinc finger motifs
chrX_+_47004639 0.10 ENST00000345781.6
RBM10
RNA binding motif protein 10
chr7_-_150864635 0.10 ENST00000297537.4
GBX1
gastrulation brain homeobox 1
chr22_+_39795746 0.10 ENST00000216160.6
ENST00000331454.3
TAB1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
chr14_+_105714910 0.10 ENST00000392554.3
ENST00000463376.2
ENST00000327471.3
BTBD6
BTB (POZ) domain containing 6
chr17_+_55333876 0.10 ENST00000284073.2
MSI2
musashi RNA-binding protein 2
chr15_-_65579177 0.10 ENST00000444347.2
ENST00000261888.6
PARP16
poly (ADP-ribose) polymerase family, member 16
chr1_-_35325400 0.10 ENST00000521580.2
SMIM12
small integral membrane protein 12
chr12_-_58027138 0.10 ENST00000341156.4
B4GALNT1
beta-1,4-N-acetyl-galactosaminyl transferase 1
chr15_-_86338134 0.10 ENST00000337975.5
KLHL25
kelch-like family member 25
chr19_+_13056663 0.10 ENST00000541222.1
ENST00000316856.3
ENST00000586534.1
ENST00000592268.1
RAD23A
RAD23 homolog A (S. cerevisiae)
chr2_+_25015968 0.10 ENST00000380834.2
ENST00000473706.1
CENPO
centromere protein O
chr1_-_153931052 0.09 ENST00000368630.3
ENST00000368633.1
CRTC2
CREB regulated transcription coactivator 2
chr8_+_37887772 0.09 ENST00000338825.4
EIF4EBP1
eukaryotic translation initiation factor 4E binding protein 1
chr17_-_3539558 0.09 ENST00000225519.3
SHPK
sedoheptulokinase
chr6_-_33756867 0.09 ENST00000293760.5
LEMD2
LEM domain containing 2
chr17_+_29718642 0.09 ENST00000325874.8
RAB11FIP4
RAB11 family interacting protein 4 (class II)
chr1_+_180199393 0.09 ENST00000263726.2
LHX4
LIM homeobox 4
chr6_+_37787262 0.09 ENST00000287218.4
ZFAND3
zinc finger, AN1-type domain 3
chr17_-_79829190 0.09 ENST00000581876.1
ENST00000584461.1
ENST00000583868.1
ENST00000400721.4
ENST00000269321.7
ARHGDIA
Rho GDP dissociation inhibitor (GDI) alpha
chr1_+_16693578 0.09 ENST00000401088.4
ENST00000471507.1
ENST00000401089.3
ENST00000375590.3
ENST00000492354.1
SZRD1
SUZ RNA binding domain containing 1
chr1_+_11333245 0.09 ENST00000376810.5
UBIAD1
UbiA prenyltransferase domain containing 1
chr17_-_1465924 0.09 ENST00000573231.1
ENST00000576722.1
ENST00000576761.1
ENST00000576010.2
ENST00000313486.7
ENST00000539476.1
PITPNA
phosphatidylinositol transfer protein, alpha
chr22_-_19435755 0.09 ENST00000542103.1
ENST00000399562.4
C22orf39
chromosome 22 open reading frame 39
chr17_-_1420182 0.09 ENST00000421807.2
INPP5K
inositol polyphosphate-5-phosphatase K
chr13_+_51796497 0.09 ENST00000322475.8
ENST00000280057.6
FAM124A
family with sequence similarity 124A
chr7_-_98741642 0.09 ENST00000361368.2
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
chrX_-_53449593 0.09 ENST00000375340.6
ENST00000322213.4
SMC1A
structural maintenance of chromosomes 1A
chr12_-_58135903 0.08 ENST00000257897.3
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr1_-_57045228 0.08 ENST00000371250.3
PPAP2B
phosphatidic acid phosphatase type 2B
chr11_+_59522532 0.08 ENST00000337979.4
ENST00000535361.1
STX3
syntaxin 3
chr1_+_201798269 0.08 ENST00000361565.4
IPO9
importin 9
chr3_+_48956249 0.08 ENST00000452882.1
ENST00000430423.1
ENST00000356401.4
ENST00000449376.1
ENST00000420814.1
ENST00000449729.1
ENST00000433170.1
ARIH2
ariadne RBR E3 ubiquitin protein ligase 2
chr5_-_146833485 0.08 ENST00000398514.3
DPYSL3
dihydropyrimidinase-like 3
chr2_+_73114489 0.08 ENST00000234454.5
SPR
sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
chr11_+_119205222 0.08 ENST00000311413.4
RNF26
ring finger protein 26
chr2_-_220025548 0.08 ENST00000356853.5
NHEJ1
nonhomologous end-joining factor 1
chr20_+_33814457 0.08 ENST00000246186.6
MMP24
matrix metallopeptidase 24 (membrane-inserted)
chr9_-_132404374 0.08 ENST00000277459.4
ENST00000450050.2
ENST00000277458.4
ASB6
ankyrin repeat and SOCS box containing 6
chr7_-_5463175 0.08 ENST00000399537.4
ENST00000430969.1
TNRC18
trinucleotide repeat containing 18
chr11_+_72929319 0.08 ENST00000393597.2
ENST00000311131.2
P2RY2
purinergic receptor P2Y, G-protein coupled, 2
chr20_+_35974532 0.08 ENST00000373578.2
SRC
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
chr1_-_27216729 0.08 ENST00000431781.2
ENST00000374135.4
GPN2
GPN-loop GTPase 2
chr5_-_160973649 0.08 ENST00000393959.1
ENST00000517547.1
GABRB2
gamma-aminobutyric acid (GABA) A receptor, beta 2
chr3_-_48700310 0.07 ENST00000164024.4
ENST00000544264.1
CELSR3
cadherin, EGF LAG seven-pass G-type receptor 3
chr7_+_30323923 0.07 ENST00000323037.4
ZNRF2
zinc and ring finger 2
chr17_+_38375574 0.07 ENST00000323571.4
ENST00000585043.1
ENST00000394103.3
ENST00000536600.1
WIPF2
WAS/WASL interacting protein family, member 2
chr20_+_30795664 0.07 ENST00000375749.3
ENST00000375730.3
ENST00000539210.1
POFUT1
protein O-fucosyltransferase 1
chr20_+_3451650 0.07 ENST00000262919.5
ATRN
attractin
chr22_+_42229100 0.07 ENST00000361204.4
SREBF2
sterol regulatory element binding transcription factor 2
chr9_+_77112244 0.07 ENST00000376896.3
RORB
RAR-related orphan receptor B
chr8_-_21646311 0.07 ENST00000524240.1
ENST00000400782.4
GFRA2
GDNF family receptor alpha 2
chr17_+_57408994 0.07 ENST00000312655.4
YPEL2
yippee-like 2 (Drosophila)
chr16_-_1993124 0.07 ENST00000473663.1
ENST00000399753.2
ENST00000564908.1
MSRB1
methionine sulfoxide reductase B1
chr9_+_95087766 0.07 ENST00000375587.3
CENPP
centromere protein P
chr20_+_34824355 0.07 ENST00000397286.3
ENST00000320849.4
ENST00000373932.3
AAR2
AAR2 splicing factor homolog (S. cerevisiae)
chr20_+_33292068 0.07 ENST00000374810.3
ENST00000374809.2
ENST00000451665.1
TP53INP2
tumor protein p53 inducible nuclear protein 2
chr17_-_27916621 0.07 ENST00000225394.3
GIT1
G protein-coupled receptor kinase interacting ArfGAP 1
chr8_-_145013711 0.07 ENST00000345136.3
PLEC
plectin
chr8_+_145743360 0.07 ENST00000527730.1
ENST00000529022.1
ENST00000292524.1
LRRC14
leucine rich repeat containing 14
chr17_-_1928621 0.07 ENST00000331238.6
RTN4RL1
reticulon 4 receptor-like 1
chr17_+_61627814 0.07 ENST00000310827.4
ENST00000431926.1
ENST00000415273.2
DCAF7
DDB1 and CUL4 associated factor 7
chr11_+_63706444 0.07 ENST00000377793.4
ENST00000456907.2
ENST00000539656.1
NAA40
N(alpha)-acetyltransferase 40, NatD catalytic subunit
chr10_+_102295616 0.07 ENST00000299163.6
HIF1AN
hypoxia inducible factor 1, alpha subunit inhibitor
chr7_-_99036270 0.06 ENST00000430029.1
ENST00000419981.1
ENST00000292478.4
PTCD1
pentatricopeptide repeat domain 1
chr15_+_67358163 0.06 ENST00000327367.4
SMAD3
SMAD family member 3
chr17_-_27169745 0.06 ENST00000583307.1
ENST00000581229.1
ENST00000582266.1
ENST00000577376.1
ENST00000577682.1
ENST00000581381.1
ENST00000341217.5
ENST00000581407.1
ENST00000583522.1
FAM222B
family with sequence similarity 222, member B
chr5_+_175223313 0.06 ENST00000359546.4
CPLX2
complexin 2
chr15_-_90645679 0.06 ENST00000539790.1
ENST00000559482.1
ENST00000330062.3
IDH2
isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr1_+_201617450 0.06 ENST00000295624.6
ENST00000367297.4
ENST00000367300.3
NAV1
neuron navigator 1
chr3_-_128879875 0.06 ENST00000418265.1
ENST00000393292.3
ENST00000273541.8
ISY1-RAB43
ISY1
ISY1-RAB43 readthrough
ISY1 splicing factor homolog (S. cerevisiae)
chr10_+_99609996 0.06 ENST00000370602.1
GOLGA7B
golgin A7 family, member B
chr12_-_58240470 0.06 ENST00000548823.1
ENST00000398073.2
CTDSP2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr17_+_35294075 0.06 ENST00000254457.5
LHX1
LIM homeobox 1
chr12_+_12510045 0.06 ENST00000314565.4
LOH12CR1
loss of heterozygosity, 12, chromosomal region 1
chr1_+_27561007 0.06 ENST00000319394.3
WDTC1
WD and tetratricopeptide repeats 1
chr3_-_47555167 0.06 ENST00000296149.4
ELP6
elongator acetyltransferase complex subunit 6
chr5_+_60628074 0.06 ENST00000252744.5
ZSWIM6
zinc finger, SWIM-type containing 6
chr6_+_36164487 0.06 ENST00000357641.6
BRPF3
bromodomain and PHD finger containing, 3
chr22_-_39096661 0.06 ENST00000216039.5
JOSD1
Josephin domain containing 1
chr17_-_36956155 0.05 ENST00000269554.3
PIP4K2B
phosphatidylinositol-5-phosphate 4-kinase, type II, beta
chr14_+_23775971 0.05 ENST00000250405.5
BCL2L2
BCL2-like 2
chr17_-_18908040 0.05 ENST00000388995.6
FAM83G
family with sequence similarity 83, member G
chr14_-_75179774 0.05 ENST00000555249.1
ENST00000556202.1
ENST00000356357.4
ENST00000338772.5
AREL1
AC007956.1
apoptosis resistant E3 ubiquitin protein ligase 1
Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein
chr3_+_9834227 0.05 ENST00000287613.7
ENST00000397261.3
ARPC4
actin related protein 2/3 complex, subunit 4, 20kDa
chrX_+_46433193 0.05 ENST00000276055.3
CHST7
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
chr1_+_154300217 0.05 ENST00000368489.3
ATP8B2
ATPase, aminophospholipid transporter, class I, type 8B, member 2
chr5_-_147162078 0.05 ENST00000507386.1
JAKMIP2
janus kinase and microtubule interacting protein 2
chr2_-_85829811 0.05 ENST00000306353.3
TMEM150A
transmembrane protein 150A
chr22_+_38597889 0.05 ENST00000338483.2
ENST00000538320.1
ENST00000538999.1
ENST00000441709.1
MAFF
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
chr19_-_913160 0.05 ENST00000361574.5
ENST00000587975.1
R3HDM4
R3H domain containing 4
chr22_-_36784035 0.05 ENST00000216181.5
MYH9
myosin, heavy chain 9, non-muscle
chr1_-_154842741 0.05 ENST00000271915.4
KCNN3
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr19_-_14201507 0.05 ENST00000533683.2
SAMD1
sterile alpha motif domain containing 1
chr12_-_59313270 0.05 ENST00000379141.4
LRIG3
leucine-rich repeats and immunoglobulin-like domains 3
chr11_+_66610883 0.05 ENST00000309657.3
ENST00000524506.1
RCE1
Ras converting CAAX endopeptidase 1
chr2_+_204192942 0.05 ENST00000295851.5
ENST00000261017.5
ABI2
abl-interactor 2
chr1_-_33430286 0.05 ENST00000373456.7
ENST00000356990.5
ENST00000235150.4
RNF19B
ring finger protein 19B
chr2_+_27193480 0.05 ENST00000233121.2
ENST00000405074.3
MAPRE3
microtubule-associated protein, RP/EB family, member 3
chr11_+_71640071 0.05 ENST00000533380.1
ENST00000393713.3
ENST00000545854.1
RNF121
ring finger protein 121
chr2_+_30454390 0.05 ENST00000395323.3
ENST00000406087.1
ENST00000404397.1
LBH
limb bud and heart development
chr19_-_14228541 0.05 ENST00000590853.1
ENST00000308677.4
PRKACA
protein kinase, cAMP-dependent, catalytic, alpha
chr1_-_48462566 0.05 ENST00000606738.2
TRABD2B
TraB domain containing 2B
chr14_-_47812321 0.05 ENST00000357362.3
ENST00000486952.2
ENST00000426342.1
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2
chr2_-_97405775 0.05 ENST00000264963.4
ENST00000537039.1
ENST00000377079.4
ENST00000426463.2
ENST00000534882.1
LMAN2L
lectin, mannose-binding 2-like
chr1_-_155211017 0.04 ENST00000536770.1
ENST00000368373.3
GBA
glucosidase, beta, acid
chr8_+_75896731 0.04 ENST00000262207.4
CRISPLD1
cysteine-rich secretory protein LCCL domain containing 1
chr2_-_42180940 0.04 ENST00000378711.2
C2orf91
chromosome 2 open reading frame 91
chr1_+_28696111 0.04 ENST00000373839.3
PHACTR4
phosphatase and actin regulator 4
chr4_-_987217 0.04 ENST00000361661.2
ENST00000398516.2
SLC26A1
solute carrier family 26 (anion exchanger), member 1
chr19_+_13135386 0.04 ENST00000360105.4
ENST00000588228.1
ENST00000591028.1
NFIX
nuclear factor I/X (CCAAT-binding transcription factor)
chr9_+_37485932 0.04 ENST00000377798.4
ENST00000442009.2
POLR1E
polymerase (RNA) I polypeptide E, 53kDa
chr19_+_57019212 0.04 ENST00000308031.5
ENST00000591537.1
ZNF471
zinc finger protein 471
chr12_-_498620 0.04 ENST00000399788.2
ENST00000382815.4
KDM5A
lysine (K)-specific demethylase 5A
chr10_+_103911926 0.04 ENST00000605788.1
ENST00000405356.1
NOLC1
nucleolar and coiled-body phosphoprotein 1
chr19_-_36391434 0.04 ENST00000396901.1
ENST00000585925.1
NFKBID
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
chrX_+_49687216 0.04 ENST00000376088.3
CLCN5
chloride channel, voltage-sensitive 5
chr8_-_119124045 0.04 ENST00000378204.2
EXT1
exostosin glycosyltransferase 1
chr15_+_66679155 0.04 ENST00000307102.5
MAP2K1
mitogen-activated protein kinase kinase 1
chr15_-_61521495 0.04 ENST00000335670.6
RORA
RAR-related orphan receptor A

Network of associatons between targets according to the STRING database.

First level regulatory network of CUGGCUG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:2000118 regulation of sodium-dependent phosphate transport(GO:2000118)
0.1 0.2 GO:2000525 regulation of T cell costimulation(GO:2000523) positive regulation of T cell costimulation(GO:2000525)
0.1 0.4 GO:0090625 mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
0.1 0.2 GO:2000588 positive regulation of platelet-derived growth factor receptor-beta signaling pathway(GO:2000588)
0.1 0.2 GO:0021816 lamellipodium assembly involved in ameboidal cell migration(GO:0003363) extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration(GO:0021816)
0.1 0.2 GO:1905053 regulation of base-excision repair(GO:1905051) positive regulation of base-excision repair(GO:1905053)
0.0 0.1 GO:0072356 chromosome passenger complex localization to kinetochore(GO:0072356)
0.0 0.2 GO:1904098 regulation of protein O-linked glycosylation(GO:1904098) positive regulation of protein O-linked glycosylation(GO:1904100)
0.0 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.2 GO:0001555 oocyte growth(GO:0001555)
0.0 0.2 GO:0030037 actin filament reorganization involved in cell cycle(GO:0030037)
0.0 0.1 GO:0010701 positive regulation of norepinephrine secretion(GO:0010701)
0.0 0.2 GO:0072240 ascending thin limb development(GO:0072021) DCT cell differentiation(GO:0072069) metanephric ascending thin limb development(GO:0072218) metanephric DCT cell differentiation(GO:0072240)
0.0 0.2 GO:1904141 mammary gland fat development(GO:0060611) positive regulation of macrophage colony-stimulating factor signaling pathway(GO:1902228) positive regulation of response to macrophage colony-stimulating factor(GO:1903971) positive regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903974) microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139) positive regulation of microglial cell migration(GO:1904141)
0.0 0.2 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.0 0.1 GO:0035963 response to interleukin-13(GO:0035962) cellular response to interleukin-13(GO:0035963)
0.0 0.1 GO:1903452 regulation of G1 to G0 transition(GO:1903450) positive regulation of G1 to G0 transition(GO:1903452)
0.0 0.1 GO:0021526 medial motor column neuron differentiation(GO:0021526)
0.0 0.2 GO:0043553 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324) negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
0.0 0.1 GO:1904481 response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.0 0.2 GO:0072675 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.0 0.1 GO:0071393 cellular response to progesterone stimulus(GO:0071393)
0.0 0.3 GO:0006477 protein sulfation(GO:0006477)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.1 GO:0019230 proprioception(GO:0019230)
0.0 0.1 GO:0070213 protein auto-ADP-ribosylation(GO:0070213)
0.0 0.1 GO:0000350 generation of catalytic spliceosome for second transesterification step(GO:0000350)
0.0 0.1 GO:0044376 RNA polymerase II complex import to nucleus(GO:0044376) RNA polymerase III complex localization to nucleus(GO:1990022)
0.0 0.1 GO:2000744 anterior head development(GO:0097065) regulation of anterior head development(GO:2000742) positive regulation of anterior head development(GO:2000744)
0.0 0.1 GO:1902534 single-organism membrane invagination(GO:1902534)
0.0 0.1 GO:0042264 peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0 0.0 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.0 GO:1903033 regulation of microtubule plus-end binding(GO:1903031) positive regulation of microtubule plus-end binding(GO:1903033)
0.0 0.4 GO:0008298 intracellular mRNA localization(GO:0008298)
0.0 0.3 GO:1904259 regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904259) positive regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904261) basement membrane assembly involved in embryonic body morphogenesis(GO:2001197)
0.0 0.3 GO:0046325 negative regulation of glucose import(GO:0046325)
0.0 0.1 GO:0009233 menaquinone metabolic process(GO:0009233)
0.0 0.3 GO:0005981 regulation of glycogen catabolic process(GO:0005981)
0.0 0.1 GO:2001151 regulation of renal water transport(GO:2001151) positive regulation of renal water transport(GO:2001153)
0.0 0.0 GO:0061386 closure of optic fissure(GO:0061386)
0.0 0.1 GO:0090370 negative regulation of cholesterol efflux(GO:0090370)
0.0 0.2 GO:0051451 myoblast migration(GO:0051451)
0.0 0.1 GO:1901727 positive regulation of histone deacetylase activity(GO:1901727)
0.0 0.0 GO:1904808 regulation of protein oxidation(GO:1904806) positive regulation of protein oxidation(GO:1904808)
0.0 0.0 GO:1901805 beta-glucoside metabolic process(GO:1901804) beta-glucoside catabolic process(GO:1901805) positive regulation of neuronal action potential(GO:1904457)
0.0 0.0 GO:0001188 RNA polymerase I transcriptional preinitiation complex assembly(GO:0001188) RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript(GO:0001189)
0.0 0.1 GO:0060011 Sertoli cell proliferation(GO:0060011)
0.0 0.1 GO:0036515 serotonergic neuron axon guidance(GO:0036515)
0.0 0.1 GO:0072396 response to cell cycle checkpoint signaling(GO:0072396) response to DNA integrity checkpoint signaling(GO:0072402) response to DNA damage checkpoint signaling(GO:0072423)
0.0 0.1 GO:1990928 response to amino acid starvation(GO:1990928)
0.0 0.0 GO:0034721 histone H3-K4 demethylation, trimethyl-H3-K4-specific(GO:0034721)
0.0 0.1 GO:0035881 amacrine cell differentiation(GO:0035881)
0.0 0.2 GO:0045176 apical protein localization(GO:0045176)
0.0 0.1 GO:0032796 uropod organization(GO:0032796)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0036195 muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)
0.1 0.2 GO:1990032 parallel fiber(GO:1990032)
0.0 0.2 GO:1990682 CSF1-CSF1R complex(GO:1990682)
0.0 0.4 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)
0.0 0.1 GO:1990796 photoreceptor cell terminal bouton(GO:1990796)
0.0 0.3 GO:0042587 glycogen granule(GO:0042587)
0.0 0.1 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.3 GO:0045180 basal cortex(GO:0045180)
0.0 0.2 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.2 GO:0044666 MLL3/4 complex(GO:0044666)
0.0 0.1 GO:0071020 post-spliceosomal complex(GO:0071020)
0.0 0.1 GO:0070876 SOSS complex(GO:0070876)
0.0 0.2 GO:0044327 dendritic spine head(GO:0044327)
0.0 0.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.1 GO:0031466 Cul5-RING ubiquitin ligase complex(GO:0031466)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0034481 chondroitin sulfotransferase activity(GO:0034481)
0.0 0.2 GO:0098808 mRNA cap binding(GO:0098808)
0.0 0.1 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.3 GO:0050119 N-acetylglucosamine deacetylase activity(GO:0050119)
0.0 0.2 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.1 GO:0070984 SET domain binding(GO:0070984)
0.0 0.2 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.0 0.2 GO:0005157 macrophage colony-stimulating factor receptor binding(GO:0005157)
0.0 0.1 GO:0070905 serine binding(GO:0070905)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.1 GO:0036033 mediator complex binding(GO:0036033)
0.0 0.1 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.0 0.3 GO:0009881 photoreceptor activity(GO:0009881)
0.0 0.1 GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity(GO:0030144)
0.0 0.1 GO:0000384 first spliceosomal transesterification activity(GO:0000384)
0.0 0.1 GO:0003947 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity(GO:0003947)
0.0 0.2 GO:0008429 phosphatidylethanolamine binding(GO:0008429)
0.0 0.2 GO:0019957 C-C chemokine binding(GO:0019957)
0.0 0.1 GO:0016309 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309)
0.0 0.2 GO:0032051 clathrin light chain binding(GO:0032051)
0.0 0.1 GO:1990189 peptide-serine-N-acetyltransferase activity(GO:1990189)
0.0 0.1 GO:0035374 chondroitin sulfate binding(GO:0035374)
0.0 0.2 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.0 0.2 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.1 GO:0042577 lipid phosphatase activity(GO:0042577)
0.0 0.1 GO:0005237 inhibitory extracellular ligand-gated ion channel activity(GO:0005237)
0.0 0.2 GO:0031701 angiotensin receptor binding(GO:0031701) type 1 angiotensin receptor binding(GO:0031702)
0.0 0.0 GO:0034647 histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.1 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0 0.3 REACTOME CHONDROITIN SULFATE BIOSYNTHESIS Genes involved in Chondroitin sulfate biosynthesis