A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
DLX5
|
ENSG00000105880.4 | distal-less homeobox 5 |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_99716914 | 0.66 |
ENST00000431404.2
|
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
chr15_+_89631647 | 0.48 |
ENST00000569550.1
ENST00000565066.1 ENST00000565973.1 |
ABHD2
|
abhydrolase domain containing 2 |
chr7_-_86849836 | 0.43 |
ENST00000455575.1
|
TMEM243
|
transmembrane protein 243, mitochondrial |
chr13_+_110958124 | 0.43 |
ENST00000400163.2
|
COL4A2
|
collagen, type IV, alpha 2 |
chr4_-_89442940 | 0.42 |
ENST00000527353.1
|
PIGY
|
phosphatidylinositol glycan anchor biosynthesis, class Y |
chr11_+_115498761 | 0.36 |
ENST00000424313.2
|
AP000997.1
|
AP000997.1 |
chr14_-_95236551 | 0.34 |
ENST00000238558.3
|
GSC
|
goosecoid homeobox |
chr1_+_202317855 | 0.31 |
ENST00000356764.2
|
PPP1R12B
|
protein phosphatase 1, regulatory subunit 12B |
chr7_+_100770328 | 0.28 |
ENST00000223095.4
ENST00000445463.2 |
SERPINE1
|
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
chr3_-_52567792 | 0.27 |
ENST00000307092.4
ENST00000422318.2 ENST00000459839.1 |
NT5DC2
|
5'-nucleotidase domain containing 2 |
chr14_-_68283291 | 0.25 |
ENST00000555452.1
ENST00000347230.4 |
ZFYVE26
|
zinc finger, FYVE domain containing 26 |
chr11_+_76092353 | 0.24 |
ENST00000530460.1
ENST00000321844.4 |
RP11-111M22.2
|
Homo sapiens putative uncharacterized protein FLJ37770-like (LOC100506127), mRNA. |
chr8_-_124553437 | 0.24 |
ENST00000517956.1
ENST00000443022.2 |
FBXO32
|
F-box protein 32 |
chr4_+_169575875 | 0.24 |
ENST00000503457.1
|
PALLD
|
palladin, cytoskeletal associated protein |
chr7_-_99716952 | 0.23 |
ENST00000523306.1
ENST00000344095.4 ENST00000417349.1 ENST00000493322.1 ENST00000520135.1 ENST00000418432.2 ENST00000460673.2 ENST00000452041.1 ENST00000452438.2 ENST00000451699.1 ENST00000453269.2 |
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
chr14_+_32798547 | 0.22 |
ENST00000557354.1
ENST00000557102.1 ENST00000557272.1 |
AKAP6
|
A kinase (PRKA) anchor protein 6 |
chr1_+_202317815 | 0.22 |
ENST00000608999.1
ENST00000336894.4 ENST00000480184.1 |
PPP1R12B
|
protein phosphatase 1, regulatory subunit 12B |
chr7_-_99717463 | 0.22 |
ENST00000437822.2
|
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
chr8_-_22526597 | 0.21 |
ENST00000519513.1
ENST00000276416.6 ENST00000520292.1 ENST00000522268.1 |
BIN3
|
bridging integrator 3 |
chr7_+_97736197 | 0.20 |
ENST00000297293.5
|
LMTK2
|
lemur tyrosine kinase 2 |
chr11_+_818902 | 0.19 |
ENST00000336615.4
|
PNPLA2
|
patatin-like phospholipase domain containing 2 |
chr3_-_105588231 | 0.19 |
ENST00000545639.1
ENST00000394027.3 ENST00000438603.1 ENST00000447441.1 ENST00000443752.1 |
CBLB
|
Cbl proto-oncogene B, E3 ubiquitin protein ligase |
chr7_+_99717230 | 0.18 |
ENST00000262932.3
|
CNPY4
|
canopy FGF signaling regulator 4 |
chr7_-_99716940 | 0.17 |
ENST00000440225.1
|
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
chr6_-_33256664 | 0.17 |
ENST00000444176.1
|
WDR46
|
WD repeat domain 46 |
chr15_+_89631381 | 0.16 |
ENST00000352732.5
|
ABHD2
|
abhydrolase domain containing 2 |
chr11_-_26743546 | 0.16 |
ENST00000280467.6
ENST00000396005.3 |
SLC5A12
|
solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 |
chr9_-_34329198 | 0.16 |
ENST00000379166.2
ENST00000345050.2 |
KIF24
|
kinesin family member 24 |
chr4_+_77356248 | 0.16 |
ENST00000296043.6
|
SHROOM3
|
shroom family member 3 |
chr12_+_52695617 | 0.16 |
ENST00000293525.5
|
KRT86
|
keratin 86 |
chr9_+_116225999 | 0.15 |
ENST00000317613.6
|
RGS3
|
regulator of G-protein signaling 3 |
chr1_-_21620877 | 0.15 |
ENST00000527991.1
|
ECE1
|
endothelin converting enzyme 1 |
chr17_+_42264556 | 0.14 |
ENST00000319511.6
ENST00000589785.1 ENST00000592825.1 ENST00000589184.1 |
TMUB2
|
transmembrane and ubiquitin-like domain containing 2 |
chr6_-_78173490 | 0.14 |
ENST00000369947.2
|
HTR1B
|
5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled |
chr1_-_201140673 | 0.14 |
ENST00000367333.2
|
TMEM9
|
transmembrane protein 9 |
chr2_-_220118631 | 0.14 |
ENST00000248437.4
|
TUBA4A
|
tubulin, alpha 4a |
chr12_+_7014064 | 0.14 |
ENST00000443597.2
|
LRRC23
|
leucine rich repeat containing 23 |
chr10_+_99205894 | 0.13 |
ENST00000370854.3
ENST00000393760.1 ENST00000414567.1 ENST00000370846.4 |
ZDHHC16
|
zinc finger, DHHC-type containing 16 |
chr3_+_11178779 | 0.13 |
ENST00000438284.2
|
HRH1
|
histamine receptor H1 |
chr19_+_36605850 | 0.13 |
ENST00000221855.3
|
TBCB
|
tubulin folding cofactor B |
chr2_-_220117867 | 0.12 |
ENST00000456818.1
ENST00000447205.1 |
TUBA4A
|
tubulin, alpha 4a |
chr17_+_43238438 | 0.12 |
ENST00000593138.1
ENST00000586681.1 |
HEXIM2
|
hexamethylene bis-acetamide inducible 2 |
chr1_+_54569968 | 0.12 |
ENST00000391366.1
|
AL161915.1
|
Uncharacterized protein |
chr14_+_96000930 | 0.12 |
ENST00000331334.4
|
GLRX5
|
glutaredoxin 5 |
chr5_+_142286887 | 0.12 |
ENST00000451259.1
|
ARHGAP26
|
Rho GTPase activating protein 26 |
chr14_-_24711470 | 0.12 |
ENST00000559969.1
|
TINF2
|
TERF1 (TRF1)-interacting nuclear factor 2 |
chr14_-_24711806 | 0.11 |
ENST00000540705.1
ENST00000538777.1 ENST00000558566.1 ENST00000559019.1 |
TINF2
|
TERF1 (TRF1)-interacting nuclear factor 2 |
chr11_-_71823715 | 0.10 |
ENST00000545944.1
ENST00000502597.2 |
ANAPC15
|
anaphase promoting complex subunit 15 |
chr15_+_89164520 | 0.10 |
ENST00000332810.3
|
AEN
|
apoptosis enhancing nuclease |
chr17_+_36508826 | 0.10 |
ENST00000580660.1
|
SOCS7
|
suppressor of cytokine signaling 7 |
chr5_-_42811986 | 0.10 |
ENST00000511224.1
ENST00000507920.1 ENST00000510965.1 |
SEPP1
|
selenoprotein P, plasma, 1 |
chr14_-_24711865 | 0.10 |
ENST00000399423.4
ENST00000267415.7 |
TINF2
|
TERF1 (TRF1)-interacting nuclear factor 2 |
chr1_-_198906528 | 0.10 |
ENST00000432296.1
|
MIR181A1HG
|
MIR181A1 host gene (non-protein coding) |
chr2_+_228735763 | 0.09 |
ENST00000373666.2
|
DAW1
|
dynein assembly factor with WDR repeat domains 1 |
chr12_+_7013897 | 0.09 |
ENST00000007969.8
ENST00000323702.5 |
LRRC23
|
leucine rich repeat containing 23 |
chr6_-_33160231 | 0.09 |
ENST00000395194.1
ENST00000457788.1 ENST00000341947.2 ENST00000357486.1 ENST00000374714.1 ENST00000374713.1 ENST00000395197.1 ENST00000374712.1 ENST00000361917.1 ENST00000374708.4 |
COL11A2
|
collagen, type XI, alpha 2 |
chr11_-_26593649 | 0.09 |
ENST00000455601.2
|
MUC15
|
mucin 15, cell surface associated |
chr19_-_19302931 | 0.09 |
ENST00000444486.3
ENST00000514819.3 ENST00000585679.1 ENST00000162023.5 |
MEF2BNB-MEF2B
MEF2BNB
MEF2B
|
MEF2BNB-MEF2B readthrough MEF2B neighbor myocyte enhancer factor 2B |
chr2_+_228736335 | 0.09 |
ENST00000440997.1
ENST00000545118.1 |
DAW1
|
dynein assembly factor with WDR repeat domains 1 |
chr10_+_99205959 | 0.09 |
ENST00000352634.4
ENST00000353979.3 ENST00000370842.2 ENST00000345745.5 |
ZDHHC16
|
zinc finger, DHHC-type containing 16 |
chr2_+_95963052 | 0.08 |
ENST00000295225.5
|
KCNIP3
|
Kv channel interacting protein 3, calsenilin |
chr14_-_24711764 | 0.08 |
ENST00000557921.1
ENST00000558476.1 |
TINF2
|
TERF1 (TRF1)-interacting nuclear factor 2 |
chr11_-_71823266 | 0.08 |
ENST00000538919.1
ENST00000539395.1 ENST00000542531.1 |
ANAPC15
|
anaphase promoting complex subunit 15 |
chr12_+_54378849 | 0.08 |
ENST00000515593.1
|
HOXC10
|
homeobox C10 |
chr19_+_4007644 | 0.08 |
ENST00000262971.2
|
PIAS4
|
protein inhibitor of activated STAT, 4 |
chr2_+_196313239 | 0.08 |
ENST00000413290.1
|
AC064834.1
|
AC064834.1 |
chr10_-_99205607 | 0.07 |
ENST00000477692.2
ENST00000485122.2 ENST00000370886.5 ENST00000370885.4 ENST00000370902.3 ENST00000370884.5 |
EXOSC1
|
exosome component 1 |
chr6_-_27860956 | 0.07 |
ENST00000359611.2
|
HIST1H2AM
|
histone cluster 1, H2am |
chr3_-_105587879 | 0.07 |
ENST00000264122.4
ENST00000403724.1 ENST00000405772.1 |
CBLB
|
Cbl proto-oncogene B, E3 ubiquitin protein ligase |
chr1_-_151762900 | 0.07 |
ENST00000440583.2
|
TDRKH
|
tudor and KH domain containing |
chr5_-_42812143 | 0.07 |
ENST00000514985.1
|
SEPP1
|
selenoprotein P, plasma, 1 |
chr19_+_54641444 | 0.07 |
ENST00000221232.5
ENST00000358389.3 |
CNOT3
|
CCR4-NOT transcription complex, subunit 3 |
chr4_-_8873531 | 0.07 |
ENST00000400677.3
|
HMX1
|
H6 family homeobox 1 |
chr17_+_59489112 | 0.07 |
ENST00000335108.2
|
C17orf82
|
chromosome 17 open reading frame 82 |
chr1_-_78444776 | 0.06 |
ENST00000370767.1
ENST00000421641.1 |
FUBP1
|
far upstream element (FUSE) binding protein 1 |
chr11_-_102709441 | 0.06 |
ENST00000434103.1
|
MMP3
|
matrix metallopeptidase 3 (stromelysin 1, progelatinase) |
chr19_-_36606181 | 0.05 |
ENST00000221859.4
|
POLR2I
|
polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa |
chr17_-_47786375 | 0.04 |
ENST00000511657.1
|
SLC35B1
|
solute carrier family 35, member B1 |
chr12_-_57039739 | 0.04 |
ENST00000552959.1
ENST00000551020.1 ENST00000553007.2 ENST00000552919.1 ENST00000552104.1 ENST00000262030.3 |
ATP5B
|
ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide |
chr14_+_32798462 | 0.04 |
ENST00000280979.4
|
AKAP6
|
A kinase (PRKA) anchor protein 6 |
chr5_-_20575959 | 0.04 |
ENST00000507958.1
|
CDH18
|
cadherin 18, type 2 |
chr1_-_242612779 | 0.04 |
ENST00000427495.1
|
PLD5
|
phospholipase D family, member 5 |
chr18_-_53255379 | 0.04 |
ENST00000565908.2
|
TCF4
|
transcription factor 4 |
chr16_+_58010339 | 0.04 |
ENST00000290871.5
ENST00000441824.2 |
TEPP
|
testis, prostate and placenta expressed |
chr19_+_36606354 | 0.04 |
ENST00000589996.1
ENST00000591296.1 |
TBCB
|
tubulin folding cofactor B |
chr1_-_78444738 | 0.04 |
ENST00000436586.2
ENST00000370768.2 |
FUBP1
|
far upstream element (FUSE) binding protein 1 |
chr22_-_30960876 | 0.03 |
ENST00000401975.1
ENST00000428682.1 ENST00000423299.1 |
GAL3ST1
|
galactose-3-O-sulfotransferase 1 |
chr17_-_37009882 | 0.03 |
ENST00000378096.3
ENST00000394332.1 ENST00000394333.1 ENST00000577407.1 ENST00000479035.2 |
RPL23
|
ribosomal protein L23 |
chr5_-_160279207 | 0.03 |
ENST00000327245.5
|
ATP10B
|
ATPase, class V, type 10B |
chr1_+_61547894 | 0.03 |
ENST00000403491.3
|
NFIA
|
nuclear factor I/A |
chr18_+_55888767 | 0.02 |
ENST00000431212.2
ENST00000586268.1 ENST00000587190.1 |
NEDD4L
|
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
chr2_+_228736321 | 0.02 |
ENST00000309931.2
|
DAW1
|
dynein assembly factor with WDR repeat domains 1 |
chr9_+_34646651 | 0.02 |
ENST00000378842.3
|
GALT
|
galactose-1-phosphate uridylyltransferase |
chr3_+_186560476 | 0.02 |
ENST00000320741.2
ENST00000444204.2 |
ADIPOQ
|
adiponectin, C1Q and collagen domain containing |
chr7_-_14029283 | 0.02 |
ENST00000433547.1
ENST00000405192.2 |
ETV1
|
ets variant 1 |
chr4_+_151503077 | 0.02 |
ENST00000317605.4
|
MAB21L2
|
mab-21-like 2 (C. elegans) |
chr7_+_70597109 | 0.01 |
ENST00000333538.5
|
WBSCR17
|
Williams-Beuren syndrome chromosome region 17 |
chr4_-_69111401 | 0.01 |
ENST00000332644.5
|
TMPRSS11B
|
transmembrane protease, serine 11B |
chr17_-_47785504 | 0.01 |
ENST00000514907.1
ENST00000503334.1 ENST00000508520.1 |
SLC35B1
|
solute carrier family 35, member B1 |
chr4_-_66536057 | 0.01 |
ENST00000273854.3
|
EPHA5
|
EPH receptor A5 |
chr10_-_97200772 | 0.01 |
ENST00000371241.1
ENST00000354106.3 ENST00000371239.1 ENST00000361941.3 ENST00000277982.5 ENST00000371245.3 |
SORBS1
|
sorbin and SH3 domain containing 1 |
chr12_-_50616382 | 0.00 |
ENST00000552783.1
|
LIMA1
|
LIM domain and actin binding 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0001300 | chronological cell aging(GO:0001300) |
0.1 | 0.2 | GO:0014839 | myoblast migration involved in skeletal muscle regeneration(GO:0014839) |
0.1 | 0.4 | GO:0010836 | negative regulation of protein ADP-ribosylation(GO:0010836) |
0.0 | 0.1 | GO:0007198 | adenylate cyclase-inhibiting serotonin receptor signaling pathway(GO:0007198) |
0.0 | 0.3 | GO:1902261 | positive regulation of delayed rectifier potassium channel activity(GO:1902261) |
0.0 | 0.2 | GO:0010814 | substance P catabolic process(GO:0010814) calcitonin catabolic process(GO:0010816) endothelin maturation(GO:0034959) |
0.0 | 0.2 | GO:0010898 | positive regulation of triglyceride catabolic process(GO:0010898) |
0.0 | 0.6 | GO:0048240 | sperm capacitation(GO:0048240) |
0.0 | 0.3 | GO:0014029 | neural crest formation(GO:0014029) |
0.0 | 0.1 | GO:0060023 | soft palate development(GO:0060023) |
0.0 | 0.4 | GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) |
0.0 | 0.1 | GO:0015785 | UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334) |
0.0 | 0.1 | GO:0032962 | positive regulation of inositol trisphosphate biosynthetic process(GO:0032962) |
0.0 | 0.2 | GO:0035873 | lactate transport(GO:0015727) lactate transmembrane transport(GO:0035873) |
0.0 | 0.3 | GO:0007175 | negative regulation of epidermal growth factor-activated receptor activity(GO:0007175) |
0.0 | 1.3 | GO:0042795 | snRNA transcription(GO:0009301) snRNA transcription from RNA polymerase II promoter(GO:0042795) |
0.0 | 0.1 | GO:1902231 | positive regulation of keratinocyte apoptotic process(GO:1902174) positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902231) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.6 | GO:0097524 | sperm plasma membrane(GO:0097524) |
0.1 | 0.4 | GO:0010370 | perinucleolar chromocenter(GO:0010370) |
0.0 | 0.4 | GO:0005587 | collagen type IV trimer(GO:0005587) |
0.0 | 1.1 | GO:0033276 | transcription factor TFTC complex(GO:0033276) |
0.0 | 0.4 | GO:0000506 | glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506) |
0.0 | 0.2 | GO:0031302 | intrinsic component of endosome membrane(GO:0031302) |
0.0 | 0.3 | GO:0014701 | junctional sarcoplasmic reticulum membrane(GO:0014701) |
0.0 | 0.1 | GO:0071547 | piP-body(GO:0071547) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | GO:0017162 | aryl hydrocarbon receptor binding(GO:0017162) |
0.0 | 0.6 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.0 | 0.2 | GO:0004465 | lipoprotein lipase activity(GO:0004465) |
0.0 | 0.1 | GO:0004993 | G-protein coupled serotonin receptor activity(GO:0004993) amine binding(GO:0043176) serotonin binding(GO:0051378) |
0.0 | 0.1 | GO:0005459 | UDP-galactose transmembrane transporter activity(GO:0005459) |
0.0 | 0.2 | GO:0015129 | lactate transmembrane transporter activity(GO:0015129) |
0.0 | 0.3 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
0.0 | 0.1 | GO:0004969 | histamine receptor activity(GO:0004969) |
0.0 | 0.3 | GO:0008253 | 5'-nucleotidase activity(GO:0008253) |
0.0 | 0.1 | GO:0097322 | 7SK snRNA binding(GO:0097322) |
0.0 | 0.1 | GO:0030020 | extracellular matrix structural constituent conferring tensile strength(GO:0030020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING | Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening |
0.0 | 0.1 | REACTOME SEROTONIN RECEPTORS | Genes involved in Serotonin receptors |
0.0 | 0.4 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |