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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for GLIS3

Z-value: 0.65

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Transcription factors associated with GLIS3

Gene Symbol Gene ID Gene Info
GLIS3
ENSG00000107249.17 GLIS family zinc finger 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GLIS3hg19_v2_chr9_-_4299874_42999160.157.7e-01Click!

Activity profile of GLIS3 motif

Sorted Z-values of GLIS3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr19_-_48673465 0.55 ENST00000598938.1
LIG1
ligase I, DNA, ATP-dependent
chr7_-_127032114 0.46 ENST00000436992.1
ZNF800
zinc finger protein 800
chr11_+_68451943 0.34 ENST00000265643.3
GAL
galanin/GMAP prepropeptide
chr17_+_4675175 0.33 ENST00000270560.3
TM4SF5
transmembrane 4 L six family member 5
chr3_-_160167301 0.28 ENST00000494486.1
TRIM59
tripartite motif containing 59
chr19_-_10613361 0.27 ENST00000591039.1
ENST00000591419.1
KEAP1
kelch-like ECH-associated protein 1
chr19_-_10613862 0.25 ENST00000592055.1
KEAP1
kelch-like ECH-associated protein 1
chr22_-_32022280 0.25 ENST00000442379.1
PISD
phosphatidylserine decarboxylase
chr3_-_160167508 0.24 ENST00000479460.1
TRIM59
tripartite motif containing 59
chr17_-_79917645 0.24 ENST00000477214.1
NOTUM
notum pectinacetylesterase homolog (Drosophila)
chr22_-_21482352 0.23 ENST00000329949.3
POM121L7
POM121 transmembrane nucleoporin-like 7
chr6_+_159084188 0.20 ENST00000367081.3
SYTL3
synaptotagmin-like 3
chr17_-_77925806 0.20 ENST00000574241.2
TBC1D16
TBC1 domain family, member 16
chr9_+_131904233 0.20 ENST00000432651.1
ENST00000435132.1
PPP2R4
protein phosphatase 2A activator, regulatory subunit 4
chr9_+_131904295 0.18 ENST00000434095.1
PPP2R4
protein phosphatase 2A activator, regulatory subunit 4
chr19_-_10613421 0.17 ENST00000393623.2
KEAP1
kelch-like ECH-associated protein 1
chr7_+_150758642 0.17 ENST00000488420.1
SLC4A2
solute carrier family 4 (anion exchanger), member 2
chr19_+_48828582 0.17 ENST00000270221.6
ENST00000596315.1
EMP3
epithelial membrane protein 3
chr5_+_172386517 0.17 ENST00000519522.1
RPL26L1
ribosomal protein L26-like 1
chr1_-_157108266 0.16 ENST00000326786.4
ETV3
ets variant 3
chr19_+_1495362 0.15 ENST00000395479.4
REEP6
receptor accessory protein 6
chr9_+_131903916 0.15 ENST00000419582.1
PPP2R4
protein phosphatase 2A activator, regulatory subunit 4
chr1_+_59250815 0.15 ENST00000544621.1
ENST00000419531.2
RP4-794H19.2
long intergenic non-protein coding RNA 1135
chr9_-_130742792 0.14 ENST00000373095.1
FAM102A
family with sequence similarity 102, member A
chr22_-_21482046 0.14 ENST00000419447.1
POM121L7
POM121 transmembrane nucleoporin-like 7
chr2_+_219824357 0.14 ENST00000302625.4
CDK5R2
cyclin-dependent kinase 5, regulatory subunit 2 (p39)
chr5_-_180671172 0.14 ENST00000512805.1
GNB2L1
guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
chr10_+_71389983 0.13 ENST00000373279.4
C10orf35
chromosome 10 open reading frame 35
chr6_+_24495185 0.13 ENST00000348925.2
ALDH5A1
aldehyde dehydrogenase 5 family, member A1
chr2_-_208030295 0.12 ENST00000458272.1
KLF7
Kruppel-like factor 7 (ubiquitous)
chr1_-_22215192 0.12 ENST00000374673.3
HSPG2
heparan sulfate proteoglycan 2
chr5_+_72509751 0.12 ENST00000515556.1
ENST00000513379.1
ENST00000427584.2
RP11-60A8.1
RP11-60A8.1
chr11_-_118789613 0.12 ENST00000532899.1
BCL9L
B-cell CLL/lymphoma 9-like
chr19_-_49828438 0.11 ENST00000454748.3
ENST00000598828.1
ENST00000335875.4
SLC6A16
solute carrier family 6, member 16
chr14_+_77228532 0.11 ENST00000167106.4
ENST00000554237.1
VASH1
vasohibin 1
chr10_+_105314881 0.11 ENST00000437579.1
NEURL
neuralized E3 ubiquitin protein ligase 1
chr6_+_89791507 0.11 ENST00000354922.3
PNRC1
proline-rich nuclear receptor coactivator 1
chr3_-_160167540 0.11 ENST00000496222.1
ENST00000471396.1
ENST00000471155.1
ENST00000309784.4
TRIM59
tripartite motif containing 59
chr6_+_44191507 0.11 ENST00000371724.1
ENST00000371713.1
SLC29A1
solute carrier family 29 (equilibrative nucleoside transporter), member 1
chr6_+_44191290 0.10 ENST00000371755.3
ENST00000371740.5
ENST00000371731.1
ENST00000393841.1
SLC29A1
solute carrier family 29 (equilibrative nucleoside transporter), member 1
chr5_-_137090028 0.09 ENST00000314940.4
HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
chr22_+_18834324 0.08 ENST00000342005.4
AC008132.13
Uncharacterized protein
chr3_+_127348005 0.08 ENST00000342480.6
PODXL2
podocalyxin-like 2
chr11_-_68671264 0.08 ENST00000362034.2
MRPL21
mitochondrial ribosomal protein L21
chr19_-_48673552 0.08 ENST00000536218.1
ENST00000596549.1
LIG1
ligase I, DNA, ATP-dependent
chr1_-_157108130 0.08 ENST00000368192.4
ETV3
ets variant 3
chr21_-_46330545 0.08 ENST00000320216.6
ENST00000397852.1
ITGB2
integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
chr1_+_16062820 0.07 ENST00000294454.5
SLC25A34
solute carrier family 25, member 34
chr12_+_48152774 0.07 ENST00000549243.1
SLC48A1
solute carrier family 48 (heme transporter), member 1
chr15_+_91478493 0.07 ENST00000418476.2
UNC45A
unc-45 homolog A (C. elegans)
chr22_+_31489344 0.07 ENST00000404574.1
SMTN
smoothelin
chr22_-_31742218 0.06 ENST00000266269.5
ENST00000405309.3
ENST00000351933.4
PATZ1
POZ (BTB) and AT hook containing zinc finger 1
chr7_+_150758304 0.06 ENST00000482950.1
ENST00000463414.1
ENST00000310317.5
SLC4A2
solute carrier family 4 (anion exchanger), member 2
chr13_+_25670268 0.06 ENST00000281589.3
PABPC3
poly(A) binding protein, cytoplasmic 3
chr20_-_44718538 0.05 ENST00000290231.6
ENST00000372291.3
NCOA5
nuclear receptor coactivator 5
chr11_+_393428 0.05 ENST00000533249.1
ENST00000527442.1
PKP3
plakophilin 3
chr9_-_88874519 0.05 ENST00000376001.3
ENST00000339137.3
C9orf153
chromosome 9 open reading frame 153
chr15_-_43882140 0.05 ENST00000429176.1
PPIP5K1
diphosphoinositol pentakisphosphate kinase 1
chr6_+_33172407 0.04 ENST00000374662.3
HSD17B8
hydroxysteroid (17-beta) dehydrogenase 8
chr17_+_80818231 0.04 ENST00000576996.1
TBCD
tubulin folding cofactor D
chr16_+_30006615 0.04 ENST00000563197.1
INO80E
INO80 complex subunit E
chr19_-_56092187 0.04 ENST00000325421.4
ENST00000592239.1
ZNF579
zinc finger protein 579
chr1_+_33207381 0.04 ENST00000401073.2
KIAA1522
KIAA1522
chr5_+_172386419 0.03 ENST00000265100.2
ENST00000519239.1
RPL26L1
ribosomal protein L26-like 1
chr8_-_12051576 0.03 ENST00000524571.2
ENST00000533852.2
ENST00000533513.1
ENST00000448228.2
ENST00000534520.1
ENST00000321602.8
FAM86B1
family with sequence similarity 86, member B1
chr15_-_43882353 0.03 ENST00000453080.1
ENST00000360301.4
ENST00000360135.4
ENST00000417085.1
ENST00000431962.1
ENST00000334933.4
ENST00000381879.4
ENST00000420765.1
PPIP5K1
diphosphoinositol pentakisphosphate kinase 1
chr17_-_33446820 0.03 ENST00000592577.1
ENST00000590016.1
ENST00000345365.6
ENST00000360276.3
ENST00000357906.3
RAD51D
RAD51 paralog D
chr17_+_46018872 0.03 ENST00000583599.1
ENST00000434554.2
ENST00000225573.4
ENST00000544840.1
ENST00000534893.1
PNPO
pyridoxamine 5'-phosphate oxidase
chr17_+_48912744 0.03 ENST00000311378.4
WFIKKN2
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
chr1_+_31886653 0.02 ENST00000536384.1
SERINC2
serine incorporator 2
chr9_-_98279241 0.02 ENST00000437951.1
ENST00000375274.2
ENST00000430669.2
ENST00000468211.2
PTCH1
patched 1
chr5_+_41925325 0.02 ENST00000296812.2
ENST00000281623.3
ENST00000509134.1
FBXO4
F-box protein 4
chr2_-_241737128 0.02 ENST00000404283.3
KIF1A
kinesin family member 1A
chr1_+_1950763 0.02 ENST00000378585.4
GABRD
gamma-aminobutyric acid (GABA) A receptor, delta
chr11_+_66886717 0.02 ENST00000398645.2
KDM2A
lysine (K)-specific demethylase 2A
chr8_-_7220490 0.01 ENST00000400078.2
ZNF705G
zinc finger protein 705G
chrX_-_132549506 0.01 ENST00000370828.3
GPC4
glypican 4
chr1_-_247095236 0.01 ENST00000478568.1
AHCTF1
AT hook containing transcription factor 1
chr11_+_1463728 0.01 ENST00000544817.1
BRSK2
BR serine/threonine kinase 2
chr19_+_13875316 0.01 ENST00000319545.8
ENST00000593245.1
ENST00000040663.6
MRI1
methylthioribose-1-phosphate isomerase 1
chr11_-_18813110 0.01 ENST00000396168.1
PTPN5
protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
chr18_+_3451646 0.01 ENST00000345133.5
ENST00000330513.5
ENST00000549546.1
TGIF1
TGFB-induced factor homeobox 1
chr20_-_6103666 0.01 ENST00000536936.1
FERMT1
fermitin family member 1
chrX_+_64887512 0.01 ENST00000360270.5
MSN
moesin
chr20_-_18447667 0.00 ENST00000262547.5
ENST00000329494.5
ENST00000357236.4
DZANK1
double zinc ribbon and ankyrin repeat domains 1
chr1_+_110527308 0.00 ENST00000369799.5
AHCYL1
adenosylhomocysteinase-like 1

Network of associatons between targets according to the STRING database.

First level regulatory network of GLIS3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:1903461 Okazaki fragment processing involved in mitotic DNA replication(GO:1903461)
0.1 0.3 GO:0051795 positive regulation of catagen(GO:0051795)
0.1 0.2 GO:1990697 protein depalmitoleylation(GO:1990697)
0.0 0.7 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0021722 superior olivary nucleus development(GO:0021718) superior olivary nucleus maturation(GO:0021722)
0.0 0.2 GO:0015864 uridine transport(GO:0015862) pyrimidine nucleoside transport(GO:0015864)
0.0 0.1 GO:1901491 negative regulation of lymphangiogenesis(GO:1901491)
0.0 0.6 GO:0046597 negative regulation of viral entry into host cell(GO:0046597)
0.0 0.1 GO:0006540 glutamate decarboxylation to succinate(GO:0006540)
0.0 0.2 GO:0097012 cellular response to granulocyte macrophage colony-stimulating factor stimulus(GO:0097011) response to granulocyte macrophage colony-stimulating factor(GO:0097012)
0.0 0.1 GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0090571 RNA polymerase II transcription repressor complex(GO:0090571)
0.0 0.1 GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
0.0 0.6 GO:0030992 intraciliary transport particle B(GO:0030992)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:1990699 palmitoleyl hydrolase activity(GO:1990699)
0.1 0.3 GO:0004966 galanin receptor activity(GO:0004966)
0.0 0.6 GO:0003910 DNA ligase (ATP) activity(GO:0003910)
0.0 0.1 GO:0016534 cyclin-dependent protein kinase 5 activator activity(GO:0016534)
0.0 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 0.0 GO:0047025 3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity(GO:0047025)
0.0 0.1 GO:0033857 diphosphoinositol-pentakisphosphate kinase activity(GO:0033857)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND Genes involved in Processive synthesis on the lagging strand