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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for UAAGACG

Z-value: 0.37

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miRNA associated with seed UAAGACG

NamemiRBASE accession
hsa-miR-208a-3p
MIMAT0000241
hsa-miR-208b-3p
MIMAT0004960

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr8_+_48920960 0.24 ENST00000523111.2
ENST00000523432.1
ENST00000521346.1
ENST00000517630.1
UBE2V2
ubiquitin-conjugating enzyme E2 variant 2
chr6_+_105404899 0.22 ENST00000345080.4
LIN28B
lin-28 homolog B (C. elegans)
chr1_-_108507631 0.21 ENST00000527011.1
ENST00000370056.4
VAV3
vav 3 guanine nucleotide exchange factor
chr14_-_50698276 0.16 ENST00000216373.5
SOS2
son of sevenless homolog 2 (Drosophila)
chr15_+_44829255 0.14 ENST00000261868.5
ENST00000424492.3
EIF3J
eukaryotic translation initiation factor 3, subunit J
chr15_+_52311398 0.13 ENST00000261845.5
MAPK6
mitogen-activated protein kinase 6
chr10_-_89577910 0.13 ENST00000308448.7
ENST00000541004.1
ATAD1
ATPase family, AAA domain containing 1
chr5_+_56469775 0.12 ENST00000424459.3
GPBP1
GC-rich promoter binding protein 1
chr1_+_97187318 0.12 ENST00000609116.1
ENST00000370198.1
ENST00000370197.1
ENST00000426398.2
ENST00000394184.3
PTBP2
polypyrimidine tract binding protein 2
chr5_+_122110691 0.11 ENST00000379516.2
ENST00000505934.1
ENST00000514949.1
SNX2
sorting nexin 2
chr21_-_16437255 0.11 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr2_+_120517174 0.11 ENST00000263708.2
PTPN4
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
chr17_-_45266542 0.10 ENST00000531206.1
ENST00000527547.1
ENST00000446365.2
ENST00000575483.1
ENST00000066544.3
CDC27
cell division cycle 27
chr12_-_93323013 0.09 ENST00000322349.8
EEA1
early endosome antigen 1
chr2_-_68290106 0.09 ENST00000407324.1
ENST00000355848.3
ENST00000409302.1
ENST00000410067.3
C1D
C1D nuclear receptor corepressor
chr10_+_98592009 0.09 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chrY_+_15016725 0.08 ENST00000336079.3
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr5_-_76788317 0.07 ENST00000296679.4
WDR41
WD repeat domain 41
chr5_-_114880533 0.07 ENST00000274457.3
FEM1C
fem-1 homolog c (C. elegans)
chrX_+_41192595 0.07 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr13_-_50367057 0.07 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr3_+_186501336 0.07 ENST00000323963.5
ENST00000440191.2
ENST00000356531.5
EIF4A2
eukaryotic translation initiation factor 4A2
chr2_+_42396472 0.07 ENST00000318522.5
ENST00000402711.2
EML4
echinoderm microtubule associated protein like 4
chr8_+_17013515 0.06 ENST00000262096.8
ZDHHC2
zinc finger, DHHC-type containing 2
chr7_-_120498357 0.06 ENST00000415871.1
ENST00000222747.3
ENST00000430985.1
TSPAN12
tetraspanin 12
chr9_+_101867359 0.06 ENST00000374994.4
TGFBR1
transforming growth factor, beta receptor 1
chr7_-_105029329 0.06 ENST00000393651.3
ENST00000460391.1
SRPK2
SRSF protein kinase 2
chr14_-_35182994 0.06 ENST00000341223.3
CFL2
cofilin 2 (muscle)
chr9_-_127952032 0.06 ENST00000456642.1
ENST00000373546.3
ENST00000373547.4
PPP6C
protein phosphatase 6, catalytic subunit
chr15_+_57210818 0.06 ENST00000438423.2
ENST00000267811.5
ENST00000452095.2
ENST00000559609.1
ENST00000333725.5
TCF12
transcription factor 12
chr10_+_112631547 0.06 ENST00000280154.7
ENST00000393104.2
PDCD4
programmed cell death 4 (neoplastic transformation inhibitor)
chr6_-_166075557 0.05 ENST00000539869.2
ENST00000366882.1
PDE10A
phosphodiesterase 10A
chr5_+_112043186 0.05 ENST00000509732.1
ENST00000457016.1
ENST00000507379.1
APC
adenomatous polyposis coli
chr3_-_71774516 0.05 ENST00000425534.3
EIF4E3
eukaryotic translation initiation factor 4E family member 3
chr12_+_72148614 0.05 ENST00000261263.3
RAB21
RAB21, member RAS oncogene family
chr8_+_38614807 0.05 ENST00000330691.6
ENST00000348567.4
TACC1
transforming, acidic coiled-coil containing protein 1
chr7_-_139876812 0.05 ENST00000397560.2
JHDM1D
lysine (K)-specific demethylase 7A
chrX_-_24045303 0.05 ENST00000328046.8
KLHL15
kelch-like family member 15
chr12_+_50135588 0.05 ENST00000423828.1
ENST00000550445.1
TMBIM6
transmembrane BAX inhibitor motif containing 6
chr10_-_32345305 0.05 ENST00000302418.4
KIF5B
kinesin family member 5B
chr9_-_72374848 0.05 ENST00000377200.5
ENST00000340434.4
ENST00000472967.2
PTAR1
protein prenyltransferase alpha subunit repeat containing 1
chr10_-_75255724 0.05 ENST00000342558.3
ENST00000360663.5
ENST00000394829.2
ENST00000394828.2
ENST00000394822.2
PPP3CB
protein phosphatase 3, catalytic subunit, beta isozyme
chr8_-_67579418 0.04 ENST00000310421.4
VCPIP1
valosin containing protein (p97)/p47 complex interacting protein 1
chr5_-_131132614 0.04 ENST00000307968.7
ENST00000307954.8
FNIP1
folliculin interacting protein 1
chr15_-_49338748 0.04 ENST00000559471.1
SECISBP2L
SECIS binding protein 2-like
chr17_-_62050278 0.04 ENST00000578147.1
ENST00000435607.1
SCN4A
sodium channel, voltage-gated, type IV, alpha subunit
chr10_-_27149792 0.04 ENST00000376140.3
ENST00000376170.4
ABI1
abl-interactor 1
chr3_+_43328004 0.04 ENST00000454177.1
ENST00000429705.2
ENST00000296088.7
ENST00000437827.1
SNRK
SNF related kinase
chr1_-_39339777 0.04 ENST00000397572.2
MYCBP
MYC binding protein
chr12_-_42538657 0.03 ENST00000398675.3
GXYLT1
glucoside xylosyltransferase 1
chr12_+_68042495 0.03 ENST00000344096.3
DYRK2
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr3_-_72496035 0.03 ENST00000477973.2
RYBP
RING1 and YY1 binding protein
chr1_-_39347255 0.03 ENST00000454994.2
ENST00000357771.3
GJA9
gap junction protein, alpha 9, 59kDa
chr2_-_86564776 0.03 ENST00000165698.5
ENST00000541910.1
ENST00000535845.1
REEP1
receptor accessory protein 1
chr11_-_118047376 0.03 ENST00000278947.5
SCN2B
sodium channel, voltage-gated, type II, beta subunit
chr17_+_66508537 0.03 ENST00000392711.1
ENST00000585427.1
ENST00000589228.1
ENST00000536854.2
ENST00000588702.1
ENST00000589309.1
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha
chrX_+_136648297 0.03 ENST00000287538.5
ZIC3
Zic family member 3
chr20_+_48552908 0.03 ENST00000244061.2
RNF114
ring finger protein 114
chr13_+_50571155 0.03 ENST00000420995.2
ENST00000378182.3
ENST00000356017.4
ENST00000457662.2
TRIM13
tripartite motif containing 13
chr6_-_13711773 0.03 ENST00000011619.3
RANBP9
RAN binding protein 9
chr7_-_30029367 0.02 ENST00000242059.5
SCRN1
secernin 1
chr7_+_65338230 0.02 ENST00000360768.3
VKORC1L1
vitamin K epoxide reductase complex, subunit 1-like 1
chr11_-_86666427 0.02 ENST00000531380.1
FZD4
frizzled family receptor 4
chr4_-_100871506 0.02 ENST00000296417.5
H2AFZ
H2A histone family, member Z
chr8_+_42752053 0.02 ENST00000307602.4
HOOK3
hook microtubule-tethering protein 3
chr13_+_100258907 0.02 ENST00000376355.3
ENST00000376360.1
ENST00000444838.2
ENST00000376354.1
ENST00000339105.4
CLYBL
citrate lyase beta like
chr13_+_49550015 0.02 ENST00000492622.2
FNDC3A
fibronectin type III domain containing 3A
chr6_+_133562472 0.02 ENST00000430974.2
ENST00000367895.5
ENST00000355167.3
ENST00000355286.6
EYA4
eyes absent homolog 4 (Drosophila)
chr8_-_23712312 0.02 ENST00000290271.2
STC1
stanniocalcin 1
chr1_-_55680762 0.02 ENST00000407756.1
ENST00000294383.6
USP24
ubiquitin specific peptidase 24
chr7_-_106301405 0.02 ENST00000523505.1
CCDC71L
coiled-coil domain containing 71-like
chr15_-_56535464 0.02 ENST00000559447.2
ENST00000422057.1
ENST00000317318.6
ENST00000423270.1
RFX7
regulatory factor X, 7
chr6_+_163835669 0.01 ENST00000453779.2
ENST00000275262.7
ENST00000392127.2
ENST00000361752.3
QKI
QKI, KH domain containing, RNA binding
chr8_+_56014949 0.01 ENST00000327381.6
XKR4
XK, Kell blood group complex subunit-related family, member 4
chr17_+_11144580 0.01 ENST00000441885.3
ENST00000432116.3
ENST00000409168.3
SHISA6
shisa family member 6
chr3_+_29322803 0.01 ENST00000396583.3
ENST00000383767.2
RBMS3
RNA binding motif, single stranded interacting protein 3
chr3_-_18466787 0.01 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr15_+_101142722 0.01 ENST00000332783.7
ENST00000558747.1
ENST00000343276.4
ASB7
ankyrin repeat and SOCS box containing 7
chr17_-_5389477 0.01 ENST00000572834.1
ENST00000570848.1
ENST00000571971.1
ENST00000158771.4
DERL2
derlin 2
chr14_-_21737610 0.01 ENST00000320084.7
ENST00000449098.1
ENST00000336053.6
HNRNPC
heterogeneous nuclear ribonucleoprotein C (C1/C2)
chr2_-_174830430 0.01 ENST00000310015.6
ENST00000455789.2
SP3
Sp3 transcription factor
chr17_-_73775839 0.01 ENST00000592643.1
ENST00000591890.1
ENST00000587171.1
ENST00000254810.4
ENST00000589599.1
H3F3B
H3 histone, family 3B (H3.3B)
chr12_-_12419703 0.01 ENST00000543091.1
ENST00000261349.4
LRP6
low density lipoprotein receptor-related protein 6
chr7_-_44924939 0.01 ENST00000395699.2
PURB
purine-rich element binding protein B
chr1_+_110527308 0.01 ENST00000369799.5
AHCYL1
adenosylhomocysteinase-like 1
chr9_+_96793076 0.01 ENST00000375360.3
PTPDC1
protein tyrosine phosphatase domain containing 1
chr1_-_205782304 0.01 ENST00000367137.3
SLC41A1
solute carrier family 41 (magnesium transporter), member 1
chr2_-_208030647 0.01 ENST00000309446.6
KLF7
Kruppel-like factor 7 (ubiquitous)
chr9_-_16870704 0.00 ENST00000380672.4
ENST00000380667.2
ENST00000380666.2
ENST00000486514.1
BNC2
basonuclin 2
chr16_-_46655538 0.00 ENST00000303383.3
SHCBP1
SHC SH2-domain binding protein 1
chr9_+_82186872 0.00 ENST00000376544.3
ENST00000376520.4
TLE4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr12_-_99548270 0.00 ENST00000546568.1
ENST00000332712.7
ENST00000546960.1
ANKS1B
ankyrin repeat and sterile alpha motif domain containing 1B
chr7_+_155089486 0.00 ENST00000340368.4
ENST00000344756.4
ENST00000425172.1
ENST00000342407.5
INSIG1
insulin induced gene 1
chr12_-_92539614 0.00 ENST00000256015.3
BTG1
B-cell translocation gene 1, anti-proliferative
chr5_-_79287060 0.00 ENST00000512560.1
ENST00000509852.1
ENST00000512528.1
MTX3
metaxin 3
chr7_+_90225796 0.00 ENST00000380050.3
CDK14
cyclin-dependent kinase 14
chr5_+_129240151 0.00 ENST00000305031.4
CHSY3
chondroitin sulfate synthase 3

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0001543 ovarian follicle rupture(GO:0001543)
0.0 0.2 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.1 GO:1904761 negative regulation of myofibroblast differentiation(GO:1904761)
0.0 0.1 GO:1905073 occluding junction disassembly(GO:1905071) regulation of occluding junction disassembly(GO:1905073) positive regulation of occluding junction disassembly(GO:1905075)
0.0 0.1 GO:0035063 nuclear speck organization(GO:0035063)
0.0 0.0 GO:0002904 positive regulation of B cell apoptotic process(GO:0002904)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0031372 UBC13-MMS2 complex(GO:0031372)
0.0 0.1 GO:0030905 retromer, tubulation complex(GO:0030905)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990460 leptin receptor binding(GO:1990460)
0.0 0.0 GO:0099609 microtubule lateral binding(GO:0099609)