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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for VSX1

Z-value: 0.68

Motif logo

Transcription factors associated with VSX1

Gene Symbol Gene ID Gene Info
ENSG00000100987.10 visual system homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
VSX1hg19_v2_chr20_-_25062767_250627790.582.3e-01Click!

Activity profile of VSX1 motif

Sorted Z-values of VSX1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_-_240322685 0.75 ENST00000544989.1
histone deacetylase 4
chr12_+_110011571 0.68 ENST00000539696.1
ENST00000228510.3
ENST00000392727.3
mevalonate kinase
chr6_+_26199737 0.65 ENST00000359985.1
histone cluster 1, H2bf
chr13_+_110958124 0.60 ENST00000400163.2
collagen, type IV, alpha 2
chr7_-_86849836 0.55 ENST00000455575.1
transmembrane protein 243, mitochondrial
chrX_-_47509994 0.54 ENST00000343894.4
ELK1, member of ETS oncogene family
chr7_-_99716914 0.53 ENST00000431404.2
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr1_-_112281875 0.45 ENST00000527621.1
ENST00000534365.1
ENST00000357260.5
family with sequence similarity 212, member B
chr13_-_30160925 0.44 ENST00000450494.1
solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
chr6_+_31783291 0.41 ENST00000375651.5
ENST00000608703.1
ENST00000458062.2
heat shock 70kDa protein 1A
chrX_-_47509887 0.40 ENST00000247161.3
ENST00000592066.1
ENST00000376983.3
ELK1, member of ETS oncogene family
chr15_+_89631647 0.40 ENST00000569550.1
ENST00000565066.1
ENST00000565973.1
abhydrolase domain containing 2
chr6_-_26124138 0.36 ENST00000314332.5
ENST00000396984.1
histone cluster 1, H2bc
chr1_-_36916011 0.36 ENST00000356637.5
ENST00000354267.3
ENST00000235532.5
organic solute carrier partner 1
chr2_-_73460334 0.35 ENST00000258083.2
protease-associated domain containing 1
chr19_-_40324767 0.35 ENST00000601972.1
ENST00000430012.2
ENST00000323039.5
ENST00000348817.3
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
chr17_-_76732928 0.34 ENST00000589768.1
cytohesin 1
chr9_+_131799213 0.34 ENST00000358369.4
ENST00000406926.2
ENST00000277475.5
ENST00000450073.1
family with sequence similarity 73, member B
chr11_-_76155618 0.33 ENST00000530759.1
RP11-111M22.3
chr11_-_59383617 0.33 ENST00000263847.1
oxysterol binding protein
chr19_+_46498704 0.33 ENST00000595358.1
ENST00000594672.1
ENST00000536603.1
coiled-coil domain containing 61
chr19_+_11485333 0.31 ENST00000312423.2
SWIM-type zinc finger 7 associated protein 1
chr6_-_31782813 0.29 ENST00000375654.4
heat shock 70kDa protein 1-like
chr7_-_111424462 0.28 ENST00000437129.1
dedicator of cytokinesis 4
chr12_+_7014064 0.28 ENST00000443597.2
leucine rich repeat containing 23
chr15_-_53002007 0.27 ENST00000561490.1
family with sequence similarity 214, member A
chr1_+_159750776 0.27 ENST00000368107.1
dual specificity phosphatase 23
chr16_+_68279207 0.26 ENST00000413021.2
ENST00000565744.1
ENST00000219345.5
phospholipase A2, group XV
chr3_-_52567792 0.26 ENST00000307092.4
ENST00000422318.2
ENST00000459839.1
5'-nucleotidase domain containing 2
chrX_+_37639264 0.26 ENST00000378588.4
cytochrome b-245, beta polypeptide
chr19_-_39421377 0.26 ENST00000430193.3
ENST00000600042.1
ENST00000221431.6
seryl-tRNA synthetase 2, mitochondrial
chr16_-_2264779 0.26 ENST00000333503.7
phosphoglycolate phosphatase
chr8_-_145159083 0.26 ENST00000398712.2
SHANK-associated RH domain interactor
chr16_-_4784128 0.26 ENST00000592711.1
ENST00000590147.1
ENST00000304283.4
ENST00000592190.1
ENST00000589065.1
ENST00000585773.1
ENST00000450067.2
ENST00000592698.1
ENST00000586166.1
ENST00000586605.1
ENST00000592421.1
ankyrin repeat and sterile alpha motif domain containing 3
chr20_+_10415931 0.25 ENST00000334534.5
SLX4 interacting protein
chr11_-_4629388 0.25 ENST00000526337.1
ENST00000300747.5
tripartite motif containing 68
chr4_+_147096837 0.25 ENST00000296581.5
ENST00000502781.1
LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
chr19_-_47616992 0.25 ENST00000253048.5
zinc finger CCCH-type containing 4
chr6_-_32145861 0.25 ENST00000336984.6
1-acylglycerol-3-phosphate O-acyltransferase 1
chr14_+_32798547 0.24 ENST00000557354.1
ENST00000557102.1
ENST00000557272.1
A kinase (PRKA) anchor protein 6
chr8_+_145159376 0.24 ENST00000322428.5
MAF1 homolog (S. cerevisiae)
chr2_-_25451065 0.24 ENST00000606328.1
RP11-458N5.1
chr19_-_19302931 0.24 ENST00000444486.3
ENST00000514819.3
ENST00000585679.1
ENST00000162023.5
MEF2BNB-MEF2B readthrough
MEF2B neighbor
myocyte enhancer factor 2B
chr11_+_67798090 0.24 ENST00000313468.5
NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
chr16_+_69345243 0.23 ENST00000254950.11
vacuolar protein sorting 4 homolog A (S. cerevisiae)
chr3_-_105588231 0.23 ENST00000545639.1
ENST00000394027.3
ENST00000438603.1
ENST00000447441.1
ENST00000443752.1
Cbl proto-oncogene B, E3 ubiquitin protein ligase
chr13_+_19756173 0.23 ENST00000382988.2
RP11-408E5.4
chr7_+_99699179 0.23 ENST00000438383.1
ENST00000429084.1
ENST00000359593.4
ENST00000439416.1
adaptor-related protein complex 4, mu 1 subunit
chr5_-_176738883 0.23 ENST00000513169.1
ENST00000423571.2
ENST00000502529.1
ENST00000427908.2
MAX dimerization protein 3
chr16_-_30773372 0.22 ENST00000545825.1
ENST00000541260.1
chromosome 16 open reading frame 93
chr17_-_72869086 0.22 ENST00000581530.1
ENST00000420580.2
ENST00000455107.2
ENST00000413947.2
ENST00000581219.1
ENST00000582944.1
ferredoxin reductase
chr8_+_145159415 0.22 ENST00000534585.1
MAF1 homolog (S. cerevisiae)
chr2_-_240322643 0.22 ENST00000345617.3
histone deacetylase 4
chr12_+_7013897 0.22 ENST00000007969.8
ENST00000323702.5
leucine rich repeat containing 23
chr5_+_159343688 0.22 ENST00000306675.3
adrenoceptor alpha 1B
chr3_-_47324060 0.22 ENST00000452770.2
kinesin family member 9
chr19_-_14247365 0.21 ENST00000592798.1
ENST00000474890.1
anti-silencing function 1B histone chaperone
chr6_-_30684898 0.21 ENST00000422266.1
ENST00000416571.1
mediator of DNA-damage checkpoint 1
chr19_+_13001840 0.21 ENST00000222214.5
ENST00000589039.1
ENST00000591470.1
ENST00000457854.1
ENST00000422947.2
ENST00000588905.1
ENST00000587072.1
glutaryl-CoA dehydrogenase
chr1_+_43148059 0.21 ENST00000321358.7
ENST00000332220.6
Y box binding protein 1
chr19_-_40324255 0.21 ENST00000593685.1
ENST00000600611.1
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
chr7_-_99699538 0.20 ENST00000343023.6
ENST00000303887.5
minichromosome maintenance complex component 7
chr6_+_42018614 0.20 ENST00000465926.1
ENST00000482432.1
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
chr11_-_4629367 0.20 ENST00000533021.1
tripartite motif containing 68
chr6_-_30685214 0.20 ENST00000425072.1
mediator of DNA-damage checkpoint 1
chr11_-_66056596 0.20 ENST00000471387.2
ENST00000359461.6
ENST00000376901.4
Yip1 interacting factor homolog A (S. cerevisiae)
chr2_-_98280383 0.20 ENST00000289228.5
ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
chr2_+_74881432 0.20 ENST00000453930.1
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
chr6_+_33422343 0.20 ENST00000395064.2
zinc finger and BTB domain containing 9
chr7_-_111424506 0.20 ENST00000450156.1
ENST00000494651.2
dedicator of cytokinesis 4
chr17_-_72869140 0.20 ENST00000583917.1
ENST00000293195.5
ENST00000442102.2
ferredoxin reductase
chr19_-_39340563 0.19 ENST00000601813.1
heterogeneous nuclear ribonucleoprotein L
chr4_-_82393052 0.19 ENST00000335927.7
ENST00000504863.1
ENST00000264400.2
RasGEF domain family, member 1B
chr7_+_99933730 0.19 ENST00000610247.1
paired immunoglobin-like type 2 receptor beta
chr5_+_148737562 0.19 ENST00000274569.4
prenylcysteine oxidase 1 like
chr6_+_31795506 0.19 ENST00000375650.3
heat shock 70kDa protein 1B
chr11_+_67798114 0.19 ENST00000453471.2
ENST00000528492.1
ENST00000526339.1
ENST00000525419.1
NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
chr13_-_110438914 0.19 ENST00000375856.3
insulin receptor substrate 2
chr11_-_76155700 0.19 ENST00000572035.1
RP11-111M22.3
chr1_-_154946792 0.19 ENST00000412170.1
SHC (Src homology 2 domain containing) transforming protein 1
chr1_-_45956822 0.19 ENST00000372086.3
ENST00000341771.6
testis-specific kinase 2
chr7_+_99425633 0.19 ENST00000354829.2
ENST00000421837.2
ENST00000417625.1
ENST00000342499.4
ENST00000444905.1
ENST00000415413.1
ENST00000312017.5
ENST00000222382.5
cytochrome P450, family 3, subfamily A, polypeptide 43
chr6_+_36165133 0.18 ENST00000446974.1
ENST00000454960.1
bromodomain and PHD finger containing, 3
chr19_-_13227514 0.18 ENST00000587487.1
ENST00000592814.1
tRNA methyltransferase 1 homolog (S. cerevisiae)
chr7_+_99699280 0.18 ENST00000421755.1
adaptor-related protein complex 4, mu 1 subunit
chr1_-_45956868 0.18 ENST00000451835.2
testis-specific kinase 2
chr17_+_1733251 0.18 ENST00000570451.1
replication protein A1, 70kDa
chr15_+_83478370 0.18 ENST00000286760.4
WAS protein homolog associated with actin, golgi membranes and microtubules
chr19_-_47164386 0.18 ENST00000391916.2
ENST00000410105.2
dishevelled-binding antagonist of beta-catenin 3
chr11_+_119205222 0.18 ENST00000311413.4
ring finger protein 26
chr6_+_31707725 0.18 ENST00000375755.3
ENST00000375742.3
ENST00000375750.3
ENST00000425703.1
ENST00000534153.4
ENST00000375703.3
ENST00000375740.3
mutS homolog 5
chr18_+_3411595 0.18 ENST00000552383.1
TGFB-induced factor homeobox 1
chr10_+_99205894 0.17 ENST00000370854.3
ENST00000393760.1
ENST00000414567.1
ENST00000370846.4
zinc finger, DHHC-type containing 16
chr1_-_151762943 0.17 ENST00000368825.3
ENST00000368823.1
ENST00000458431.2
ENST00000368827.6
ENST00000368824.3
tudor and KH domain containing
chr17_-_1532106 0.17 ENST00000301335.5
ENST00000382147.4
solute carrier family 43 (amino acid system L transporter), member 2
chr11_+_560956 0.17 ENST00000397582.3
ENST00000344375.4
ENST00000397583.3
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
chr16_-_87350970 0.17 ENST00000567970.1
chromosome 16 open reading frame 95
chr9_-_35072585 0.17 ENST00000448530.1
valosin containing protein
chr19_+_50270219 0.17 ENST00000354293.5
ENST00000359032.5
adaptor-related protein complex 2, alpha 1 subunit
chr19_-_14228541 0.16 ENST00000590853.1
ENST00000308677.4
protein kinase, cAMP-dependent, catalytic, alpha
chr14_-_74959978 0.16 ENST00000541064.1
Niemann-Pick disease, type C2
chr10_-_127505167 0.16 ENST00000368786.1
uroporphyrinogen III synthase
chr8_-_29120580 0.16 ENST00000524189.1
kinesin family member 13B
chr19_+_39421556 0.16 ENST00000407800.2
ENST00000402029.3
mitochondrial ribosomal protein S12
chr7_-_99716952 0.16 ENST00000523306.1
ENST00000344095.4
ENST00000417349.1
ENST00000493322.1
ENST00000520135.1
ENST00000418432.2
ENST00000460673.2
ENST00000452041.1
ENST00000452438.2
ENST00000451699.1
ENST00000453269.2
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr1_-_23520755 0.16 ENST00000314113.3
5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
chr7_-_137686791 0.16 ENST00000452463.1
ENST00000330387.6
ENST00000456390.1
cAMP responsive element binding protein 3-like 2
chr19_-_7694417 0.16 ENST00000358368.4
ENST00000534844.1
XPA binding protein 2
chr1_-_159915386 0.16 ENST00000361509.3
ENST00000368094.1
immunoglobulin superfamily, member 9
chr11_-_66056478 0.15 ENST00000431556.2
ENST00000528575.1
Yip1 interacting factor homolog A (S. cerevisiae)
chr7_-_99717463 0.15 ENST00000437822.2
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr9_+_140135665 0.15 ENST00000340384.4
tubulin, beta 4B class IVb
chr17_+_79650962 0.15 ENST00000329138.4
hepatocyte growth factor-regulated tyrosine kinase substrate
chrX_-_153363188 0.15 ENST00000303391.6
methyl CpG binding protein 2 (Rett syndrome)
chr19_-_11266437 0.15 ENST00000586708.1
ENST00000591396.1
ENST00000592967.1
ENST00000585486.1
ENST00000585567.1
SPC24, NDC80 kinetochore complex component
chr9_-_38424443 0.15 ENST00000377694.1
insulin-like growth factor binding protein-like 1
chr1_-_151762900 0.15 ENST00000440583.2
tudor and KH domain containing
chr3_+_190281229 0.14 ENST00000453359.1
interleukin 1 receptor accessory protein
chr16_+_3184924 0.14 ENST00000574902.1
ENST00000396878.3
zinc finger protein 213
chr1_-_154946825 0.14 ENST00000368453.4
ENST00000368450.1
ENST00000366442.2
SHC (Src homology 2 domain containing) transforming protein 1
chr19_-_15236470 0.14 ENST00000533747.1
ENST00000598709.1
ENST00000534378.1
ilvB (bacterial acetolactate synthase)-like
chr19_-_13227463 0.14 ENST00000437766.1
ENST00000221504.8
tRNA methyltransferase 1 homolog (S. cerevisiae)
chr18_+_21594384 0.14 ENST00000584250.1
tetratricopeptide repeat domain 39C
chr11_-_133826852 0.14 ENST00000533871.2
ENST00000321016.8
immunoglobulin superfamily, member 9B
chr20_-_32274179 0.14 ENST00000343380.5
E2F transcription factor 1
chr16_+_68279256 0.14 ENST00000564827.2
ENST00000566188.1
ENST00000444212.2
ENST00000568082.1
phospholipase A2, group XV
chr1_-_36915880 0.14 ENST00000445843.3
organic solute carrier partner 1
chr4_-_119759795 0.14 ENST00000419654.2
SEC24 family member D
chr14_+_24584056 0.14 ENST00000561001.1
DDB1 and CUL4 associated factor 11
chr19_+_9945962 0.14 ENST00000587625.1
ENST00000247970.4
ENST00000588695.1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
chr3_-_47324008 0.14 ENST00000425853.1
kinesin family member 9
chr12_+_3000073 0.14 ENST00000397132.2
tubby like protein 3
chr7_-_99716940 0.14 ENST00000440225.1
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr17_+_79981144 0.13 ENST00000306688.3
leucine rich repeat containing 45
chr19_+_54619125 0.13 ENST00000445811.1
ENST00000419967.1
ENST00000445124.1
ENST00000447810.1
pre-mRNA processing factor 31
chr1_-_232598163 0.13 ENST00000308942.4
signal-induced proliferation-associated 1 like 2
chr14_-_24711806 0.13 ENST00000540705.1
ENST00000538777.1
ENST00000558566.1
ENST00000559019.1
TERF1 (TRF1)-interacting nuclear factor 2
chr19_+_34287751 0.13 ENST00000590771.1
ENST00000589786.1
ENST00000284006.6
ENST00000588881.1
potassium channel tetramerization domain containing 15
chr19_+_41770349 0.13 ENST00000602130.1
heterogeneous nuclear ribonucleoprotein U-like 1
chr1_-_78444776 0.13 ENST00000370767.1
ENST00000421641.1
far upstream element (FUSE) binding protein 1
chr10_-_131909071 0.13 ENST00000456581.1
long intergenic non-protein coding RNA 959
chr3_+_197687071 0.13 ENST00000482695.1
ENST00000330198.4
ENST00000419117.1
ENST00000420910.2
ENST00000332636.5
leishmanolysin-like (metallopeptidase M8 family)
chr11_+_119076745 0.13 ENST00000264033.4
Cbl proto-oncogene, E3 ubiquitin protein ligase
chr16_+_22501658 0.13 ENST00000415833.2
nuclear pore complex interacting protein family, member B5
chr19_-_14606900 0.13 ENST00000393029.3
ENST00000393028.1
ENST00000393033.4
ENST00000345425.2
ENST00000586027.1
ENST00000591349.1
ENST00000587210.1
GIPC PDZ domain containing family, member 1
chr7_-_72971934 0.13 ENST00000411832.1
B-cell CLL/lymphoma 7B
chr9_-_140095186 0.12 ENST00000409012.4
taperin
chr12_-_6960407 0.12 ENST00000540683.1
ENST00000229265.6
ENST00000535406.1
ENST00000422785.3
cell division cycle associated 3
chr19_-_11266471 0.12 ENST00000592540.1
SPC24, NDC80 kinetochore complex component
chr19_+_17420340 0.12 ENST00000359866.4
DET1 and DDB1 associated 1
chr15_+_90118685 0.12 ENST00000268138.7
TOPBP1-interacting checkpoint and replication regulator
chr19_+_45394477 0.12 ENST00000252487.5
ENST00000405636.2
ENST00000592434.1
ENST00000426677.2
ENST00000589649.1
translocase of outer mitochondrial membrane 40 homolog (yeast)
chr10_+_99205959 0.12 ENST00000352634.4
ENST00000353979.3
ENST00000370842.2
ENST00000345745.5
zinc finger, DHHC-type containing 16
chr1_-_167905225 0.12 ENST00000367846.4
mitochondrial pyruvate carrier 2
chr1_-_221915418 0.12 ENST00000323825.3
ENST00000366899.3
dual specificity phosphatase 10
chr9_+_104296163 0.12 ENST00000374819.2
ENST00000479306.1
ring finger protein 20, E3 ubiquitin protein ligase
chr16_-_67965756 0.12 ENST00000571044.1
ENST00000571605.1
chymotrypsin-like
chr22_-_38240412 0.12 ENST00000215941.4
ankyrin repeat domain 54
chr14_-_24711470 0.12 ENST00000559969.1
TERF1 (TRF1)-interacting nuclear factor 2
chr4_+_176986978 0.12 ENST00000508596.1
ENST00000393643.2
WD repeat domain 17
chrX_+_70503526 0.12 ENST00000413858.1
ENST00000450092.1
non-POU domain containing, octamer-binding
chr14_-_24711865 0.12 ENST00000399423.4
ENST00000267415.7
TERF1 (TRF1)-interacting nuclear factor 2
chr3_+_47324424 0.12 ENST00000437353.1
ENST00000232766.5
ENST00000455924.2
kelch-like family member 18
chr19_+_41770269 0.12 ENST00000378215.4
heterogeneous nuclear ribonucleoprotein U-like 1
chr2_-_70780770 0.12 ENST00000444975.1
ENST00000445399.1
ENST00000418333.2
transforming growth factor, alpha
chr18_+_59415396 0.12 ENST00000567801.1
RP11-1096D5.1
chr1_-_45956800 0.12 ENST00000538496.1
testis-specific kinase 2
chr10_+_1095416 0.12 ENST00000358220.1
WD repeat domain 37
chr4_+_1283639 0.12 ENST00000303400.4
ENST00000505177.2
ENST00000503653.1
ENST00000264750.6
ENST00000502558.1
ENST00000452175.2
ENST00000514708.1
macrophage erythroblast attacher
chr15_+_89631381 0.12 ENST00000352732.5
abhydrolase domain containing 2
chr19_-_13227534 0.12 ENST00000588229.1
ENST00000357720.4
tRNA methyltransferase 1 homolog (S. cerevisiae)
chr17_-_26898516 0.11 ENST00000543734.1
ENST00000395346.2
phosphatidylinositol glycan anchor biosynthesis, class S
chr18_-_21017817 0.11 ENST00000542162.1
ENST00000383233.3
ENST00000582336.1
ENST00000450466.2
ENST00000578520.1
ENST00000399707.1
transmembrane protein 241
chr9_+_104296243 0.11 ENST00000466817.1
ring finger protein 20, E3 ubiquitin protein ligase
chr7_-_44613494 0.11 ENST00000431640.1
ENST00000258772.5
DEAD (Asp-Glu-Ala-Asp) box helicase 56
chr19_+_50180317 0.11 ENST00000534465.1
protein arginine methyltransferase 1
chr5_+_177631497 0.11 ENST00000358344.3
heterogeneous nuclear ribonucleoprotein A/B
chr16_-_58663720 0.11 ENST00000564557.1
ENST00000569240.1
ENST00000441024.2
ENST00000569020.1
ENST00000317147.5
CCR4-NOT transcription complex, subunit 1
chr19_+_36195429 0.11 ENST00000392197.2
zinc finger and BTB domain containing 32
chr1_-_6052463 0.11 ENST00000378156.4
nephronophthisis 4
chr14_+_29236269 0.11 ENST00000313071.4
forkhead box G1
chr7_+_916183 0.11 ENST00000265857.3
golgi to ER traffic protein 4 homolog (S. cerevisiae)
chr11_-_32457176 0.11 ENST00000332351.3
Wilms tumor 1
chr2_+_219135115 0.11 ENST00000248451.3
ENST00000273077.4
paroxysmal nonkinesigenic dyskinesia
chr16_-_67217844 0.11 ENST00000563902.1
ENST00000561621.1
ENST00000290881.7
KIAA0895-like
chr16_-_31085514 0.11 ENST00000300849.4
zinc finger protein 668
chr14_-_24711764 0.11 ENST00000557921.1
ENST00000558476.1
TERF1 (TRF1)-interacting nuclear factor 2
chr17_+_79651007 0.11 ENST00000572392.1
ENST00000577012.1
hepatocyte growth factor-regulated tyrosine kinase substrate
chr6_+_36164487 0.11 ENST00000357641.6
bromodomain and PHD finger containing, 3
chr17_+_8191815 0.11 ENST00000226105.6
ENST00000407006.4
ENST00000580434.1
ENST00000439238.3
RAN guanine nucleotide release factor
chr19_+_7895074 0.11 ENST00000270530.4
ecotropic viral integration site 5-like
chr1_+_44115814 0.11 ENST00000372396.3
lysine (K)-specific demethylase 4A
chr17_-_74733404 0.11 ENST00000508921.3
ENST00000583836.1
ENST00000358156.6
ENST00000392485.2
ENST00000359995.5
serine/arginine-rich splicing factor 2
chr7_+_99717230 0.10 ENST00000262932.3
canopy FGF signaling regulator 4
chr11_+_64018955 0.10 ENST00000279230.6
ENST00000540288.1
ENST00000325234.5
phospholipase C, beta 3 (phosphatidylinositol-specific)
chrX_+_19373700 0.10 ENST00000379804.1
pyruvate dehydrogenase (lipoamide) alpha 1
chr5_-_13944652 0.10 ENST00000265104.4
dynein, axonemal, heavy chain 5
chr12_+_15699286 0.10 ENST00000442921.2
ENST00000542557.1
ENST00000445537.2
ENST00000544244.1
protein tyrosine phosphatase, receptor type, O
chr17_-_79650818 0.10 ENST00000397498.4
ADP-ribosylation factor-like 16
chrX_+_70503037 0.10 ENST00000535149.1
non-POU domain containing, octamer-binding

Network of associatons between targets according to the STRING database.

First level regulatory network of VSX1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 0.6 GO:0070426 positive regulation of nucleotide-binding oligomerization domain containing signaling pathway(GO:0070426) positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway(GO:0070434)
0.1 0.4 GO:0002940 tRNA N2-guanine methylation(GO:0002940)
0.1 0.4 GO:0046338 phosphatidylethanolamine catabolic process(GO:0046338)
0.1 0.3 GO:0006434 seryl-tRNA aminoacylation(GO:0006434)
0.1 1.1 GO:0071374 cellular response to parathyroid hormone stimulus(GO:0071374)
0.1 0.2 GO:1903774 positive regulation of viral budding via host ESCRT complex(GO:1903774)
0.1 0.5 GO:0016480 negative regulation of transcription from RNA polymerase III promoter(GO:0016480)
0.1 0.2 GO:0001994 norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001994)
0.1 0.2 GO:0009405 pathogenesis(GO:0009405)
0.1 0.3 GO:1904845 response to L-glutamine(GO:1904844) cellular response to L-glutamine(GO:1904845)
0.1 0.9 GO:0071394 cellular response to testosterone stimulus(GO:0071394)
0.1 0.3 GO:0006114 glycerol biosynthetic process(GO:0006114)
0.1 0.3 GO:0019747 regulation of isoprenoid metabolic process(GO:0019747)
0.1 0.2 GO:0030327 prenylated protein catabolic process(GO:0030327)
0.1 0.5 GO:1904694 negative regulation of vascular smooth muscle contraction(GO:1904694)
0.1 0.5 GO:0010836 negative regulation of protein ADP-ribosylation(GO:0010836)
0.1 0.2 GO:0072387 flavin adenine dinucleotide metabolic process(GO:0072387)
0.1 0.2 GO:1903526 negative regulation of membrane tubulation(GO:1903526)
0.1 0.4 GO:1903826 arginine transmembrane transport(GO:1903826)
0.1 0.2 GO:0071418 cellular response to amine stimulus(GO:0071418)
0.1 0.3 GO:2000348 regulation of CD40 signaling pathway(GO:2000348)
0.1 0.2 GO:0060434 bronchus morphogenesis(GO:0060434)
0.1 0.2 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.0 0.1 GO:1990086 negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930) lens fiber cell apoptotic process(GO:1990086)
0.0 0.2 GO:1900126 negative regulation of hyaluronan biosynthetic process(GO:1900126)
0.0 0.5 GO:0061051 positive regulation of cell growth involved in cardiac muscle cell development(GO:0061051)
0.0 0.3 GO:1903377 negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903377)
0.0 0.1 GO:1903348 positive regulation of bicellular tight junction assembly(GO:1903348)
0.0 0.4 GO:0002227 innate immune response in mucosa(GO:0002227)
0.0 0.1 GO:0051596 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.1 GO:0048210 Golgi vesicle fusion to target membrane(GO:0048210)
0.0 0.1 GO:0036058 filtration diaphragm assembly(GO:0036058) slit diaphragm assembly(GO:0036060)
0.0 0.1 GO:0014016 neuroblast differentiation(GO:0014016)
0.0 0.2 GO:0046985 positive regulation of hemoglobin biosynthetic process(GO:0046985)
0.0 0.1 GO:1902361 mitochondrial pyruvate transport(GO:0006850) mitochondrial pyruvate transmembrane transport(GO:1902361)
0.0 0.1 GO:0060266 negative regulation of respiratory burst involved in inflammatory response(GO:0060266)
0.0 0.1 GO:0072302 negative regulation of metanephric glomerulus development(GO:0072299) negative regulation of metanephric glomerular mesangial cell proliferation(GO:0072302)
0.0 0.2 GO:0071395 response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395)
0.0 0.3 GO:2001166 regulation of histone H2B ubiquitination(GO:2001166) positive regulation of histone H2B ubiquitination(GO:2001168)
0.0 0.1 GO:0061394 regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance(GO:0061394)
0.0 0.1 GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase(GO:0017186)
0.0 0.6 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063)
0.0 0.1 GO:0036079 GDP-fucose transport(GO:0015783) purine nucleotide-sugar transport(GO:0036079)
0.0 0.1 GO:0043654 recognition of apoptotic cell(GO:0043654)
0.0 0.1 GO:2000646 positive regulation of receptor catabolic process(GO:2000646)
0.0 0.4 GO:0007175 negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.0 0.2 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.1 GO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
0.0 0.1 GO:0038172 interleukin-33-mediated signaling pathway(GO:0038172)
0.0 0.2 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.2 GO:0034723 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0 0.5 GO:0048240 sperm capacitation(GO:0048240)
0.0 0.2 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.1 GO:0035928 rRNA import into mitochondrion(GO:0035928)
0.0 0.1 GO:0045875 negative regulation of sister chromatid cohesion(GO:0045875)
0.0 0.2 GO:0010746 regulation of plasma membrane long-chain fatty acid transport(GO:0010746) negative regulation of plasma membrane long-chain fatty acid transport(GO:0010748)
0.0 0.1 GO:1901421 positive regulation of response to alcohol(GO:1901421)
0.0 0.1 GO:0048254 snoRNA localization(GO:0048254)
0.0 0.1 GO:0043353 enucleate erythrocyte differentiation(GO:0043353)
0.0 0.4 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.3 GO:0044126 regulation of growth of symbiont in host(GO:0044126) modulation of growth of symbiont involved in interaction with host(GO:0044144)
0.0 0.2 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.2 GO:0072383 plus-end-directed vesicle transport along microtubule(GO:0072383)
0.0 0.1 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.2 GO:0014827 intestine smooth muscle contraction(GO:0014827)
0.0 0.4 GO:0006744 ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663)
0.0 0.1 GO:1900113 negative regulation of histone H3-K9 trimethylation(GO:1900113)
0.0 0.4 GO:0007176 regulation of epidermal growth factor-activated receptor activity(GO:0007176)
0.0 0.3 GO:0034587 piRNA metabolic process(GO:0034587)
0.0 0.3 GO:0006568 tryptophan metabolic process(GO:0006568)
0.0 0.4 GO:0006895 Golgi to endosome transport(GO:0006895)
0.0 0.1 GO:1902177 positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902177)
0.0 0.1 GO:1902231 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902231)
0.0 0.1 GO:0086043 bundle of His cell to Purkinje myocyte signaling(GO:0086028) bundle of His cell action potential(GO:0086043)
0.0 0.3 GO:1903543 positive regulation of exosomal secretion(GO:1903543)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024)
0.0 0.0 GO:0071109 superior temporal gyrus development(GO:0071109)
0.0 0.3 GO:0032012 regulation of ARF protein signal transduction(GO:0032012)
0.0 0.2 GO:0048387 negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
0.0 0.1 GO:1901843 positive regulation of high voltage-gated calcium channel activity(GO:1901843)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0010370 perinucleolar chromocenter(GO:0010370)
0.1 0.3 GO:0071547 piP-body(GO:0071547)
0.1 0.3 GO:0097196 Shu complex(GO:0097196)
0.1 0.5 GO:0097524 sperm plasma membrane(GO:0097524)
0.1 0.6 GO:0005587 collagen type IV trimer(GO:0005587)
0.1 0.2 GO:0034657 GID complex(GO:0034657)
0.0 0.1 GO:0035189 Rb-E2F complex(GO:0035189)
0.0 0.4 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.3 GO:0071797 LUBAC complex(GO:0071797)
0.0 0.3 GO:0070435 Shc-EGFR complex(GO:0070435)
0.0 1.0 GO:0033276 transcription factor TFTC complex(GO:0033276)
0.0 0.8 GO:0060077 inhibitory synapse(GO:0060077)
0.0 0.3 GO:0031262 Ndc80 complex(GO:0031262)
0.0 0.3 GO:0033565 ESCRT-0 complex(GO:0033565)
0.0 0.4 GO:0042382 paraspeckles(GO:0042382)
0.0 0.3 GO:0014701 junctional sarcoplasmic reticulum membrane(GO:0014701)
0.0 0.2 GO:1990730 VCP-NSFL1C complex(GO:1990730)
0.0 0.3 GO:0033503 HULC complex(GO:0033503)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.3 GO:0043020 NADPH oxidase complex(GO:0043020)
0.0 0.3 GO:0005688 U6 snRNP(GO:0005688)
0.0 0.2 GO:0071204 histone pre-mRNA 3'end processing complex(GO:0071204)
0.0 0.3 GO:0070776 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0 0.2 GO:0071012 catalytic step 1 spliceosome(GO:0071012)
0.0 0.3 GO:0002199 zona pellucida receptor complex(GO:0002199)
0.0 0.1 GO:1990031 pinceau fiber(GO:1990031)
0.0 0.2 GO:0030991 intraciliary transport particle A(GO:0030991)
0.0 0.1 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.1 GO:0070545 PeBoW complex(GO:0070545)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.2 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.1 GO:0036398 TCR signalosome(GO:0036398)
0.0 0.2 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.2 GO:0033270 paranode region of axon(GO:0033270)
0.0 0.1 GO:1990037 Lewy body core(GO:1990037)
0.0 0.1 GO:0000124 SAGA complex(GO:0000124)
0.0 0.1 GO:0036157 outer dynein arm(GO:0036157)
0.0 0.1 GO:0070876 SOSS complex(GO:0070876)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 1.0 GO:0031672 A band(GO:0031672)
0.0 0.2 GO:0042555 MCM complex(GO:0042555)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0000994 RNA polymerase III core binding(GO:0000994)
0.1 0.4 GO:0015039 ferredoxin-NADP+ reductase activity(GO:0004324) NADPH-adrenodoxin reductase activity(GO:0015039) oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730) oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.1 1.1 GO:0001025 RNA polymerase III transcription factor binding(GO:0001025)
0.1 0.3 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.1 0.4 GO:0004809 tRNA (guanine-N2-)-methyltransferase activity(GO:0004809)
0.1 0.2 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.2 GO:0004852 uroporphyrinogen-III synthase activity(GO:0004852)
0.1 1.0 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)
0.0 0.4 GO:0015181 arginine transmembrane transporter activity(GO:0015181)
0.0 0.5 GO:0055131 C3HC4-type RING finger domain binding(GO:0055131)
0.0 0.3 GO:0098519 nucleotide phosphatase activity, acting on free nucleotides(GO:0098519)
0.0 0.2 GO:0004936 alpha-adrenergic receptor activity(GO:0004936)
0.0 0.3 GO:0048408 epidermal growth factor binding(GO:0048408)
0.0 0.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.2 GO:0036435 K48-linked polyubiquitin binding(GO:0036435)
0.0 0.3 GO:0008142 oxysterol binding(GO:0008142)
0.0 0.5 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.3 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.1 GO:0016603 glutaminyl-peptide cyclotransferase activity(GO:0016603)
0.0 0.2 GO:0044020 histone methyltransferase activity (H4-R3 specific)(GO:0044020)
0.0 0.1 GO:0042134 rRNA primary transcript binding(GO:0042134)
0.0 0.4 GO:0047499 calcium-independent phospholipase A2 activity(GO:0047499)
0.0 0.2 GO:0047086 phenanthrene 9,10-monooxygenase activity(GO:0018636) ketosteroid monooxygenase activity(GO:0047086)
0.0 0.1 GO:0003923 GPI-anchor transamidase activity(GO:0003923)
0.0 0.1 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457) purine nucleotide-sugar transmembrane transporter activity(GO:0036080)
0.0 0.1 GO:0070815 peptidyl-lysine 5-dioxygenase activity(GO:0070815)
0.0 0.1 GO:0004637 phosphoribosylamine-glycine ligase activity(GO:0004637) phosphoribosylformylglycinamidine cyclo-ligase activity(GO:0004641) phosphoribosylglycinamide formyltransferase activity(GO:0004644)
0.0 0.2 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.1 GO:0033265 choline binding(GO:0033265)
0.0 0.1 GO:0002114 interleukin-33 receptor activity(GO:0002114)
0.0 0.1 GO:0033981 D-dopachrome decarboxylase activity(GO:0033981)
0.0 0.2 GO:0070097 delta-catenin binding(GO:0070097)
0.0 0.4 GO:0016175 superoxide-generating NADPH oxidase activity(GO:0016175)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.2 GO:0004993 G-protein coupled serotonin receptor activity(GO:0004993) amine binding(GO:0043176) serotonin binding(GO:0051378)
0.0 0.6 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237)
0.0 0.1 GO:0050815 phosphoserine binding(GO:0050815) phosphothreonine binding(GO:0050816)
0.0 0.2 GO:0097157 pre-mRNA intronic binding(GO:0097157)
0.0 0.1 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0050833 pyruvate transmembrane transporter activity(GO:0050833)
0.0 0.1 GO:0048273 mitogen-activated protein kinase p38 binding(GO:0048273)
0.0 0.1 GO:0030621 U4 snRNA binding(GO:0030621)
0.0 0.5 GO:0042288 MHC class I protein binding(GO:0042288)
0.0 0.0 GO:0019862 IgA binding(GO:0019862)
0.0 0.3 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.0 0.2 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0070573 metallodipeptidase activity(GO:0070573)
0.0 0.1 GO:0061649 ubiquitinated histone binding(GO:0061649)
0.0 0.1 GO:0005087 Ran guanyl-nucleotide exchange factor activity(GO:0005087)
0.0 1.0 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.3 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.2 GO:0098505 G-rich strand telomeric DNA binding(GO:0098505)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 PID RANBP2 PATHWAY Sumoylation by RanBP2 regulates transcriptional repression
0.0 1.3 SA TRKA RECEPTOR The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth.

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.9 REACTOME ERK MAPK TARGETS Genes involved in ERK/MAPK targets
0.0 0.5 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.0 0.7 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 1.0 REACTOME PACKAGING OF TELOMERE ENDS Genes involved in Packaging Of Telomere Ends
0.0 0.2 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.0 1.0 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 0.2 REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX Genes involved in Formation of transcription-coupled NER (TC-NER) repair complex
0.0 0.1 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.0 0.5 REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.0 0.3 REACTOME RETROGRADE NEUROTROPHIN SIGNALLING Genes involved in Retrograde neurotrophin signalling
0.0 0.3 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.1 REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0 0.7 REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE Genes involved in Amino acid transport across the plasma membrane
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA