mm10_v2_chr9_+_3013140_3013140	10.831	Hmga2	ENSMUST00000143083.2|Gm10721|ENSMUSG00000096519.1|predicted gene 10721
mm10_v2_chr2_-_98667264_98667301	10.7034	Hmga2	ENSMUST00000099683.1|Gm10800|ENSMUSG00000075014.1|predicted gene 10800
mm10_v2_chr14_-_19418930_19418930	10.1307	Hmga2	ENSMUST00000177817.1|Gm21738|ENSMUSG00000095280.1|predicted gene, 21738
mm10_v2_chr9_+_3004457_3004523	8.61486	Hmga2	ENSMUST00000178348.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr9_+_3023547_3023547	7.17111	Hmga2	ENSMUST00000099046.3|Gm10718|ENSMUSG00000095186.1|predicted gene 10718
mm10_v2_chr9_+_3025417_3025490	6.90232	Hmga2	ENSMUST00000075573.6|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3018753_3018779	6.30073	Hmga2	ENSMUST00000179272.1|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3017408_3017543	6.04378	Hmga2	ENSMUST00000099049.3|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_-_123260776_123260803	4.57238	Hmga2	ENSMUST00000068140.4|Tmem158|ENSMUSG00000054871.4|transmembrane protein 158
mm10_v2_chr5_+_14514918_14514951	4.55874	Hmga2	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr4_+_44756553_44756601	3.57564	Hmga2	ENSMUST00000107824.2|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr2_-_148732457_148732467	3.46575	Hmga2	ENSMUST00000028926.6|Napb|ENSMUSG00000027438.8|N-ethylmaleimide sensitive fusion protein attachment protein beta
mm10_v2_chr16_+_96361749_96361801	3.35643	Hmga2	ENSMUST00000000163.6|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5 	ENSMUST00000081093.3|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5 	ENSMUST00000113795.1|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5
mm10_v2_chr2_+_158375638_158375721	3.18635	Hmga2	ENSMUST00000109488.1|Snhg11|ENSMUSG00000044349.9|small nucleolar RNA host gene 11
mm10_v2_chr19_-_5510467_5510518	2.83677	Hmga2	ENSMUST00000070172.4|Snx32|ENSMUSG00000056185.4|sorting nexin 32
mm10_v2_chr4_+_44756609_44756682	2.81561	Hmga2	ENSMUST00000143385.1|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chrX_+_101640056_101640108	2.71634	Hmga2	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr2_+_29124106_29124181	2.62386	Hmga2	ENSMUST00000129544.1|Setx|ENSMUSG00000043535.7|senataxin
mm10_v2_chr14_-_36919314_36919352	2.54149	Hmga2	ENSMUST00000182797.1|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr16_-_43979050_43979093	2.44747	Hmga2	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr14_-_36919513_36919539	2.35921	Hmga2	ENSMUST00000182042.1|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr10_+_69787431_69787458	2.30211	Hmga2	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chrX_+_74309089_74309161	2.22193	Hmga2	ENSMUST00000130581.1|Gdi1|ENSMUSG00000015291.4|guanosine diphosphate (GDP) dissociation inhibitor 1
mm10_v2_chr13_-_62371936_62371936	2.10446	Hmga2	ENSMUST00000107989.3|Gm3604|ENSMUSG00000094942.1|predicted gene 3604
mm10_v2_chr5_-_106926245_106926321	2.08998	Hmga2	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr2_+_19344317_19344326	2.05083	Hmga2	ENSMUST00000141289.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene
mm10_v2_chr7_-_12422488_12422488	2.01401	Hmga2	ENSMUST00000120220.1|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chrM_+_10167_10167	1.97189	Hmga2	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr7_-_5413145_5413145	1.92554	Hmga2	ENSMUST00000108569.2|Vmn1r58|ENSMUSG00000078808.4|vomeronasal 1 receptor 58
mm10_v2_chr1_+_66386968_66386999	1.84905	Hmga2	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr2_+_68104671_68104671	1.80033	Hmga2	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr2_-_122702615_122702717	1.58835	Hmga2	ENSMUST00000005952.4|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4 	ENSMUST00000099457.3|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4
mm10_v2_chr18_+_37447641_37447674	1.57593	Hmga2	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr12_-_23780265_23780265	1.55007	Hmga2	ENSMUST00000072014.4|Gm10330|ENSMUSG00000071362.2|predicted gene 10330
mm10_v2_chrX_-_164980310_164980375	1.48429	Hmga2	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chrM_+_9870_9885	1.47259	Hmga2	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr2_+_91237110_91237146	1.47022	Hmga2	ENSMUST00000181191.1|A330069E16Rik|ENSMUSG00000097868.1|RIKEN cDNA A330069E16 gene
mm10_v2_chr13_-_74482943_74482943	1.46902	Hmga2	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr13_+_100107997_100108143	1.46515	Hmga2	ENSMUST00000142155.1|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1 	ENSMUST00000022145.8|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1 	ENSMUST00000132053.1|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1
mm10_v2_chr7_-_12422751_12422751	1.45417	Hmga2	ENSMUST00000080348.5|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr7_-_29853611_29853683	1.44598	Hmga2	ENSMUST00000085792.4|Zfp940|ENSMUSG00000050855.10|zinc finger protein 940 	ENSMUST00000108223.1|Zfp940|ENSMUSG00000050855.10|zinc finger protein 940
mm10_v2_chr7_-_42642547_42642609	1.41877	Hmga2	ENSMUST00000098503.2|9830147E19Rik|ENSMUSG00000074158.3|RIKEN cDNA 9830147E19 gene
mm10_v2_chr18_+_37411674_37411674	1.41263	Hmga2	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr13_-_62607499_62607499	1.40368	Hmga2	ENSMUST00000091563.4|6720489N17Rik|ENSMUSG00000072066.3|RIKEN cDNA 6720489N17 gene
mm10_v2_chr6_-_113719880_113719883	1.39851	Hmga2	ENSMUST00000064993.5|Ghrl|ENSMUSG00000064177.6|ghrelin
mm10_v2_chr8_-_84176552_84176552	1.34488	Hmga2	ENSMUST00000070102.5|Nanos3|ENSMUSG00000056155.5|nanos homolog 3 (Drosophila)
mm10_v2_chr11_+_22971991_22972070	1.29597	Hmga2	ENSMUST00000049506.5|Zrsr1|ENSMUSG00000044068.5|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm10_v2_chr10_+_90071095_90071117	1.28261	Hmga2	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_+_49975228_49975340	1.28112	Hmga2	ENSMUST00000107603.1|Nell1|ENSMUSG00000055409.7|NEL-like 1
mm10_v2_chr13_-_32802849_32802849	1.26666	Hmga2	ENSMUST00000057911.1|D930007J09Rik|ENSMUSG00000042874.1|RIKEN cDNA D930007J09 gene
mm10_v2_chr4_+_103114712_103114762	1.2273	Hmga2	ENSMUST00000143417.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr11_-_3409162_3409195	1.18554	Hmga2	ENSMUST00000101638.3|Limk2|ENSMUSG00000020451.11|LIM motif-containing protein kinase 2
mm10_v2_chr9_+_88581036_88581036	1.18147	Hmga2	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr11_+_83302817_83302952	1.17428	Hmga2	ENSMUST00000142680.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chrX_+_37126777_37126795	1.16591	Hmga2	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr11_-_116307168_116307233	1.14133	Hmga2	ENSMUST00000124281.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr10_+_123264076_123264125	1.12717	Hmga2	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr11_+_83302641_83302803	1.12686	Hmga2	ENSMUST00000176430.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit 	ENSMUST00000065692.7|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr16_+_29579331_29579342	1.1195	Hmga2	ENSMUST00000160597.1|Opa1|ENSMUSG00000038084.10|optic atrophy 1
mm10_v2_chr10_+_58446845_58446928	1.10465	Hmga2	ENSMUST00000003310.5|Ranbp2|ENSMUSG00000003226.6|RAN binding protein 2
mm10_v2_chr2_-_30359278_30359341	1.08186	Hmga2	ENSMUST00000163668.2|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000028214.8|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113621.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr9_-_97111117_97111159	1.07049	Hmga2	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr16_+_87454976_87454987	1.06398	Hmga2	ENSMUST00000119504.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16 	ENSMUST00000131356.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16
mm10_v2_chr14_-_100149764_100149764	1.05796	Hmga2	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr7_-_46672537_46672559	1.02861	Hmga2	ENSMUST00000049298.7|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr2_+_5951440_5951469	1.01744	Hmga2	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr11_-_115627948_115628122	1.00625	Hmga2	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr6_+_125039760_125039859	0.982979	Hmga2	ENSMUST00000140131.1|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4 	ENSMUST00000032480.7|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4
mm10_v2_chr12_-_87233556_87233556	0.962221	Hmga2	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr1_-_24612700_24612700	0.935587	Hmga2	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chrX_+_152178945_152178964	0.913898	Hmga2	ENSMUST00000096275.4|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2
mm10_v2_chr4_-_32923455_32923530	0.912713	Hmga2	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr3_+_53845086_53845086	0.874835	Hmga2	ENSMUST00000108014.1|Gm10985|ENSMUSG00000078742.1|predicted gene 10985
mm10_v2_chr1_+_172698046_172698063	0.873565	Hmga2	ENSMUST00000038495.3|Crp|ENSMUSG00000037942.4|C-reactive protein, pentraxin-related
mm10_v2_chr9_+_92309362_92309386	0.864607	Hmga2	ENSMUST00000098477.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene 	ENSMUST00000150594.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene
mm10_v2_chr1_-_144004142_144004161	0.856583	Hmga2	ENSMUST00000127206.1|Rgs2|ENSMUSG00000026360.3|regulator of G-protein signaling 2
mm10_v2_chr7_+_7171330_7171373	0.833429	Hmga2	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr6_+_21949571_21949683	0.829194	Hmga2	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr10_-_81014902_81014945	0.820175	Hmga2	ENSMUST00000126317.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7 	ENSMUST00000092285.3|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7 	ENSMUST00000117805.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7
mm10_v2_chr17_+_66111605_66111665	0.818654	Hmga2	ENSMUST00000116556.2|Wash|ENSMUSG00000024101.8|WAS protein family homolog
mm10_v2_chr2_-_30359190_30359272	0.813841	Hmga2	ENSMUST00000100215.4|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113620.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr11_-_83302586_83302637	0.809728	Hmga2	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr11_+_105178765_105178807	0.799849	Hmga2	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr11_+_82035569_82035585	0.798738	Hmga2	ENSMUST00000000193.5|Ccl2|ENSMUSG00000035385.5|chemokine (C-C motif) ligand 2
mm10_v2_chr13_+_104178797_104178872	0.765624	Hmga2	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr11_-_116306696_116306750	0.761579	Hmga2	ENSMUST00000133468.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106411.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106413.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000021147.7|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr2_-_181599128_181599235	0.741213	Hmga2	ENSMUST00000060173.8|Samd10|ENSMUSG00000038605.11|sterile alpha motif domain containing 10
mm10_v2_chr4_+_110397661_110397708	0.737097	Hmga2	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr1_+_132008285_132008316	0.733372	Hmga2	ENSMUST00000146432.1|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr16_-_45742888_45742955	0.73143	Hmga2	ENSMUST00000128348.1|Abhd10|ENSMUSG00000033157.10|abhydrolase domain containing 10 	ENSMUST00000066983.6|Abhd10|ENSMUSG00000033157.10|abhydrolase domain containing 10
mm10_v2_chr16_-_36784784_36784825	0.728582	Hmga2	ENSMUST00000165531.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr15_-_84065329_84065364	0.728373	Hmga2	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chr2_-_80128834_80128996	0.720575	Hmga2	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr11_-_116306652_116306691	0.715277	Hmga2	ENSMUST00000126731.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr4_-_136835843_136835988	0.708589	Hmga2	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr11_-_84069179_84069261	0.640465	Hmga2	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr16_-_36784924_36784971	0.615915	Hmga2	ENSMUST00000168279.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000164579.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000023616.2|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr16_-_26371828_26371846	0.61212	Hmga2	ENSMUST00000023154.2|Cldn1|ENSMUSG00000022512.2|claudin 1
mm10_v2_chrX_+_103356464_103356488	0.605861	Hmga2	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr11_+_77462325_77462421	0.605337	Hmga2	ENSMUST00000102493.1|Coro6|ENSMUSG00000020836.9|coronin 6
mm10_v2_chr1_-_74588117_74588145	0.582253	Hmga2	ENSMUST00000066986.6|Zfp142|ENSMUSG00000026135.11|zinc finger protein 142
mm10_v2_chr1_+_46066738_46066844	0.579867	Hmga2	ENSMUST00000069293.7|Dnah7b|ENSMUSG00000041144.9|dynein, axonemal, heavy chain 7B
mm10_v2_chr16_+_29579347_29579417	0.550143	Hmga2	ENSMUST00000038867.6|Opa1|ENSMUSG00000038084.10|optic atrophy 1 	ENSMUST00000161186.1|Opa1|ENSMUSG00000038084.10|optic atrophy 1
mm10_v2_chr6_-_106800051_106800095	0.541251	Hmga2	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr16_+_32277449_32277462	0.530595	Hmga2	ENSMUST00000155649.1|Rnf168|ENSMUSG00000014074.11|ring finger protein 168 	ENSMUST00000014218.8|Rnf168|ENSMUSG00000014074.11|ring finger protein 168 	ENSMUST00000171474.1|Rnf168|ENSMUSG00000014074.11|ring finger protein 168
mm10_v2_chr11_-_120086790_120086852	0.518842	Hmga2	ENSMUST00000106227.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1 	ENSMUST00000106229.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1 	ENSMUST00000180242.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1
mm10_v2_chr14_+_55604550_55604579	0.512273	Hmga2	ENSMUST00000138037.1|Irf9|ENSMUSG00000002325.8|interferon regulatory factor 9
mm10_v2_chrX_-_38576166_38576187	0.506212	Hmga2	ENSMUST00000050083.5|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr19_-_11818806_11818893	0.505313	Hmga2	ENSMUST00000075304.6|Stx3|ENSMUSG00000041488.9|syntaxin 3
mm10_v2_chr1_+_55131253_55131302	0.505036	Hmga2	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr17_+_66111529_66111581	0.495236	Hmga2	ENSMUST00000072383.6|Wash|ENSMUSG00000024101.8|WAS protein family homolog
mm10_v2_chr5_-_114858682_114858682	0.451646	Hmga2	ENSMUST00000066959.4|Gm9936|ENSMUSG00000054123.4|predicted gene 9936
mm10_v2_chr5_-_96164147_96164201	0.451644	Hmga2	ENSMUST00000137207.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr16_+_33185045_33185153	0.439441	Hmga2	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr3_-_152210032_152210123	0.422668	Hmga2	ENSMUST00000144950.1|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr2_-_18048784_18048822	0.398216	Hmga2	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr5_+_35583018_35583110	0.382334	Hmga2	ENSMUST00000068947.7|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000114237.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000156125.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000068563.5|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl
mm10_v2_chr1_+_74588347_74588383	0.36644	Hmga2	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr12_+_69296676_69296798	0.360755	Hmga2	ENSMUST00000021362.4|Klhdc2|ENSMUSG00000020978.4|kelch domain containing 2
mm10_v2_chr7_+_129591859_129591871	0.35989	Hmga2	ENSMUST00000084519.5|Wdr11|ENSMUSG00000042055.7|WD repeat domain 11
mm10_v2_chr9_+_122351723_122351738	0.357075	Hmga2	ENSMUST00000111497.3|Abhd5|ENSMUSG00000032540.9|abhydrolase domain containing 5
mm10_v2_chr8_+_119344490_119344538	0.311963	Hmga2	ENSMUST00000034300.6|Hsbp1|ENSMUSG00000031839.6|heat shock factor binding protein 1
mm10_v2_chr17_-_6961156_6961156	0.307149	Hmga2	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chrM_+_9452_9468	0.305142	Hmga2	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr7_+_92561141_92561210	0.300129	Hmga2	ENSMUST00000032842.6|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B 	ENSMUST00000085017.4|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B
mm10_v2_chrX_-_95956890_95956918	0.292178	Hmga2	ENSMUST00000079987.6|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae) 	ENSMUST00000113864.2|Las1l|ENSMUSG00000057421.6|LAS1-like (S. cerevisiae)
mm10_v2_chr8_-_85080652_85080673	0.285956	Hmga2	ENSMUST00000152785.1|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr3_+_88214474_88214495	0.283735	Hmga2	ENSMUST00000181356.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764 	ENSMUST00000181396.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr18_-_80934054_80934077	0.276959	Hmga2	ENSMUST00000091790.3|Atp9b|ENSMUSG00000024566.8|ATPase, class II, type 9B
mm10_v2_chr7_-_10495322_10495401	0.259397	Hmga2	ENSMUST00000032551.7|Zik1|ENSMUSG00000030393.8|zinc finger protein interacting with K protein 1
mm10_v2_chr9_+_122351555_122351608	0.251071	Hmga2	ENSMUST00000156520.1|Abhd5|ENSMUSG00000032540.9|abhydrolase domain containing 5
mm10_v2_chr7_-_84679346_84679401	0.247616	Hmga2	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr5_-_31220491_31220627	0.228453	Hmga2	ENSMUST00000031032.7|Ppm1g|ENSMUSG00000029147.7|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm10_v2_chr12_+_8208107_8208161	0.221742	Hmga2	ENSMUST00000037383.5|1110057K04Rik|ENSMUSG00000037669.8|RIKEN cDNA 1110057K04 gene 	ENSMUST00000169104.1|1110057K04Rik|ENSMUSG00000037669.8|RIKEN cDNA 1110057K04 gene
mm10_v2_chr1_-_52500679_52500679	0.193718	Hmga2	ENSMUST00000069792.7|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr10_+_29313500_29313594	0.187763	Hmga2	ENSMUST00000020034.4|Echdc1|ENSMUSG00000019883.4|enoyl Coenzyme A hydratase domain containing 1
mm10_v2_chrX_-_57393020_57393040	0.168312	Hmga2	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr7_-_45526146_45526268	0.166973	Hmga2	ENSMUST00000167273.1|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A 	ENSMUST00000042105.8|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm10_v2_chr16_-_96082513_96082573	0.158157	Hmga2	ENSMUST00000113827.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr9_+_56950878_56950932	0.152708	Hmga2	ENSMUST00000068856.4|Snupn|ENSMUSG00000055334.4|snurportin 1
mm10_v2_chr16_-_18413452_18413494	0.131057	Hmga2	ENSMUST00000165430.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase 	ENSMUST00000147720.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase
mm10_v2_chr7_-_3111950_3111950	0.12393	Hmga2	ENSMUST00000069044.5|Gm7353|ENSMUSG00000055452.5|predicted pseudogene 7353
mm10_v2_chr14_+_74732384_74732401	0.122905	Hmga2	ENSMUST00000176957.1|Esd|ENSMUSG00000021996.10|esterase D/formylglutathione hydrolase
mm10_v2_chr9_+_58488568_58488603	0.115293	Hmga2	ENSMUST00000085658.4|6030419C18Rik|ENSMUSG00000066607.4|RIKEN cDNA 6030419C18 gene
mm10_v2_chr17_+_73107982_73108080	0.111412	Hmga2	ENSMUST00000130574.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000149064.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000067545.6|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1
mm10_v2_chr7_-_97738222_97738317	0.0889712	Hmga2	ENSMUST00000084986.6|Aqp11|ENSMUSG00000042797.8|aquaporin 11
mm10_v2_chr14_+_52197502_52197518	0.081132	Hmga2	ENSMUST00000180857.1|Gm26590|ENSMUSG00000097533.1|predicted gene, 26590
mm10_v2_chr4_-_58912678_58912776	0.0737299	Hmga2	ENSMUST00000144512.1|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000102889.3|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000055822.8|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180
mm10_v2_chr14_-_31001588_31001672	0.0661971	Hmga2	ENSMUST00000162092.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000160342.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chrX_-_57392962_57392988	0.053518	Hmga2	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr9_+_122923050_122923099	0.0455308	Hmga2	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr13_+_55105290_55105399	0.0383036	Hmga2	ENSMUST00000161315.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000021937.5|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159278.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159147.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000161077.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346
mm10_v2_chr5_+_31494736_31494778	0.0325483	Hmga2	ENSMUST00000076949.6|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1 	ENSMUST00000117700.1|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1
mm10_v2_chr9_+_70012540_70012595	0.0109722	Hmga2	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr3_+_85574109_85574148	0.00434368	Hmga2	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr7_+_45526330_45526447	0.000845768	Hmga2	ENSMUST00000120985.1|Plekha4|ENSMUSG00000040428.11|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 	ENSMUST00000051810.8|Plekha4|ENSMUSG00000040428.11|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
