mm10_v2_chr4_-_64046925_64047015	6.56002	Pitx1	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr4_-_137766474_137766501	5.57706	Pitx1	ENSMUST00000139951.1|Alpl|ENSMUSG00000028766.4|alkaline phosphatase, liver/bone/kidney
mm10_v2_chr6_-_93913678_93913719	5.22246	Pitx1	ENSMUST00000093769.5|Magi1|ENSMUSG00000045095.10|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm10_v2_chr15_-_79164477_79164496	5.10127	Pitx1	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chr2_+_14388316_14388420	5.0765	Pitx1	ENSMUST00000114731.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12 	ENSMUST00000082290.7|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr2_+_102658640_102658669	4.36294	Pitx1	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr18_+_73863672_73863713	3.88049	Pitx1	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr5_+_3343893_3343945	3.73295	Pitx1	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr17_+_75005523_75005568	3.719	Pitx1	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr14_-_31640878_31640980	3.70482	Pitx1	ENSMUST00000167066.1|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000127204.2|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000022437.8|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1
mm10_v2_chr5_+_3344194_3344312	3.4737	Pitx1	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr1_-_155232710_155232729	3.45214	Pitx1	ENSMUST00000035914.3|BC034090|ENSMUSG00000033722.3|cDNA sequence BC034090
mm10_v2_chr7_-_4752972_4753094	3.34829	Pitx1	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr14_+_27039001_27039050	3.32718	Pitx1	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr13_-_97747373_97747384	3.16327	Pitx1	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr1_+_74542881_74542918	2.91653	Pitx1	ENSMUST00000113749.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000067916.6|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113745.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113747.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4 	ENSMUST00000113750.1|Plcd4|ENSMUSG00000026173.9|phospholipase C, delta 4
mm10_v2_chr7_+_30553263_30553272	2.91142	Pitx1	ENSMUST00000044048.7|Hspb6|ENSMUSG00000036854.8|heat shock protein, alpha-crystallin-related, B6
mm10_v2_chr16_-_10313940_10313968	2.78185	Pitx1	ENSMUST00000078357.4|Emp2|ENSMUSG00000022505.8|epithelial membrane protein 2
mm10_v2_chr2_+_119325784_119325817	2.76882	Pitx1	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr14_-_118052235_118052253	2.75933	Pitx1	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr4_-_41697040_41697089	2.63664	Pitx1	ENSMUST00000102962.3|Cntfr|ENSMUSG00000028444.11|ciliary neurotrophic factor receptor 	ENSMUST00000084701.5|Cntfr|ENSMUSG00000028444.11|ciliary neurotrophic factor receptor
mm10_v2_chr2_+_91259822_91259860	2.60866	Pitx1	ENSMUST00000138470.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr4_+_144892813_144892835	2.54442	Pitx1	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr1_-_170110491_170110532	2.53687	Pitx1	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr16_+_90831113_90831150	2.50412	Pitx1	ENSMUST00000037539.7|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans) 	ENSMUST00000099543.3|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans)
mm10_v2_chr14_+_26122609_26122609	2.43774	Pitx1	ENSMUST00000100810.6|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr8_-_46294592_46294671	2.42179	Pitx1	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr13_-_97747399_97747414	2.38864	Pitx1	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr14_-_54926784_54926805	2.37653	Pitx1	ENSMUST00000022813.6|Efs|ENSMUSG00000022203.6|embryonal Fyn-associated substrate
mm10_v2_chr17_-_58991343_58991375	2.29329	Pitx1	ENSMUST00000025064.7|2610034M16Rik|ENSMUSG00000024227.8|RIKEN cDNA 2610034M16 gene
mm10_v2_chr9_+_50617516_50617561	2.27597	Pitx1	ENSMUST00000141366.1|Pih1d2|ENSMUSG00000000167.8|PIH1 domain containing 2
mm10_v2_chr6_+_29361410_29361461	2.17272	Pitx1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr4_+_144893077_144893103	2.15474	Pitx1	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr14_+_25983005_25983005	2.1486	Pitx1	ENSMUST00000049793.8|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr9_+_35423582_35423589	2.12106	Pitx1	ENSMUST00000154652.1|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr1_+_167598450_167598480	2.09811	Pitx1	ENSMUST00000111386.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma 	ENSMUST00000111384.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr4_-_42661893_42661893	2.061	Pitx1	ENSMUST00000108006.3|Il11ra2|ENSMUSG00000078735.3|interleukin 11 receptor, alpha chain 2
mm10_v2_chr19_-_36919606_36919622	2.05453	Pitx1	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chr8_+_127063893_127063916	2.03429	Pitx1	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr13_+_3361029_3361029	2.02073	Pitx1	ENSMUST00000179981.1|Gm16505|ENSMUSG00000096107.1|predicted gene 16505
mm10_v2_chr2_+_14388434_14388512	2.01141	Pitx1	ENSMUST00000133258.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr4_+_144893127_144893151	2.00529	Pitx1	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_+_116708687_116708704	1.91679	Pitx1	ENSMUST00000135499.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr10_-_92165159_92165177	1.8523	Pitx1	ENSMUST00000182567.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181604.2|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181213.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr19_-_47919269_47919305	1.84741	Pitx1	ENSMUST00000095998.5|Itprip|ENSMUSG00000079254.3|inositol 1,4,5-triphosphate receptor interacting protein
mm10_v2_chr17_+_35861318_35861339	1.78216	Pitx1	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr8_+_127064022_127064086	1.77384	Pitx1	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr1_-_165934900_165935036	1.7499	Pitx1	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr4_-_133968611_133968650	1.72484	Pitx1	ENSMUST00000102552.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr18_+_36281069_36281151	1.70768	Pitx1	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr1_-_119648903_119649000	1.69977	Pitx1	ENSMUST00000163147.1|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000052404.6|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000027632.7|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5
mm10_v2_chr10_+_25408346_25408395	1.69261	Pitx1	ENSMUST00000092645.6|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr11_+_82388900_82388900	1.62856	Pitx1	ENSMUST00000054245.4|Tmem132e|ENSMUSG00000020701.6|transmembrane protein 132E 	ENSMUST00000092852.2|Tmem132e|ENSMUSG00000020701.6|transmembrane protein 132E
mm10_v2_chr1_+_167598384_167598411	1.57644	Pitx1	ENSMUST00000015987.3|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr14_+_67745229_67745269	1.55444	Pitx1	ENSMUST00000111095.2|Gnrh1|ENSMUSG00000015812.7|gonadotropin releasing hormone 1
mm10_v2_chr5_-_5694559_5694581	1.45086	Pitx1	ENSMUST00000115426.2|Steap2|ENSMUSG00000015653.7|six transmembrane epithelial antigen of prostate 2
mm10_v2_chr9_+_44101722_44101842	1.44522	Pitx1	ENSMUST00000161703.1|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein 	ENSMUST00000161381.1|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein 	ENSMUST00000034654.7|Mfrp|ENSMUSG00000034739.11|membrane-type frizzled-related protein
mm10_v2_chr19_-_12765447_12765632	1.43872	Pitx1	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr5_+_137641334_137641437	1.42144	Pitx1	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr11_+_23256566_23256589	1.36872	Pitx1	ENSMUST00000136235.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr13_+_89540636_89540678	1.3309	Pitx1	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr1_+_157458554_157458597	1.32575	Pitx1	ENSMUST00000046743.4|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585 	ENSMUST00000119891.1|BC026585|ENSMUSG00000033488.5|cDNA sequence BC026585
mm10_v2_chr3_-_57294880_57294899	1.22529	Pitx1	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr5_+_137787769_137787807	1.16092	Pitx1	ENSMUST00000035852.7|Zcwpw1|ENSMUSG00000037108.7|zinc finger, CW type with PWWP domain 1
mm10_v2_chr1_+_178187417_178187713	1.16029	Pitx1	ENSMUST00000161075.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2 	ENSMUST00000027783.7|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr7_+_16781341_16781352	1.15147	Pitx1	ENSMUST00000108496.2|Slc1a5|ENSMUSG00000001918.11|solute carrier family 1 (neutral amino acid transporter), member 5
mm10_v2_chr1_+_178187721_178187847	1.14545	Pitx1	ENSMUST00000159284.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr7_-_134232005_134232054	1.11095	Pitx1	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr8_+_78509319_78509399	1.0725	Pitx1	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chrX_+_169879596_169879664	1.05645	Pitx1	ENSMUST00000112105.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000078947.5|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr13_+_113035111_113035387	1.03834	Pitx1	ENSMUST00000180543.1|Cdc20b|ENSMUSG00000078926.2|cell division cycle 20B 	ENSMUST00000181568.1|Cdc20b|ENSMUSG00000078926.2|cell division cycle 20B 	ENSMUST00000109244.2|Cdc20b|ENSMUSG00000078926.2|cell division cycle 20B 	ENSMUST00000181117.1|Cdc20b|ENSMUSG00000078926.2|cell division cycle 20B 	ENSMUST00000181741.1|Cdc20b|ENSMUSG00000078926.2|cell division cycle 20B
mm10_v2_chr11_-_51756378_51756618	1.02292	Pitx1	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr3_-_84270782_84270794	1.00435	Pitx1	ENSMUST00000054990.4|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr10_-_80421847_80421876	0.993332	Pitx1	ENSMUST00000156244.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3
mm10_v2_chr16_-_46010212_46010223	0.992837	Pitx1	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr3_+_89520152_89520175	0.942473	Pitx1	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr17_+_35861343_35861486	0.926537	Pitx1	ENSMUST00000172931.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr4_-_52497244_52497244	0.921535	Pitx1	ENSMUST00000114578.4|Vma21-ps|ENSMUSG00000061619.3|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene
mm10_v2_chr5_+_8422831_8422906	0.906743	Pitx1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr9_+_31030621_31030700	0.902831	Pitx1	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr15_+_18818895_18818947	0.89568	Pitx1	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr6_+_3993776_3993797	0.895592	Pitx1	ENSMUST00000031673.5|Gngt1|ENSMUSG00000029663.5|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm10_v2_chr9_-_100486788_100486788	0.893365	Pitx1	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr1_-_136230289_136230332	0.879055	Pitx1	ENSMUST00000150163.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene 	ENSMUST00000144464.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene
mm10_v2_chr2_+_38341068_38341092	0.852039	Pitx1	ENSMUST00000133661.1|Lhx2|ENSMUSG00000000247.5|LIM homeobox protein 2
mm10_v2_chr5_+_8422908_8422988	0.842139	Pitx1	ENSMUST00000170496.1|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr10_-_127288999_127289035	0.840813	Pitx1	ENSMUST00000119078.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr2_+_69670100_69670134	0.819098	Pitx1	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr10_+_4266323_4266341	0.80478	Pitx1	ENSMUST00000045730.5|Akap12|ENSMUSG00000038587.8|A kinase (PRKA) anchor protein (gravin) 12
mm10_v2_chr1_-_191907527_191907527	0.79414	Pitx1	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr7_-_127725616_127725616	0.791255	Pitx1	ENSMUST00000076091.2|Ctf2|ENSMUSG00000060034.4|cardiotrophin 2
mm10_v2_chr4_+_99829437_99829500	0.790899	Pitx1	ENSMUST00000124547.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7 	ENSMUST00000106994.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7
mm10_v2_chr7_-_80403315_80403339	0.786492	Pitx1	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr2_-_18048347_18048449	0.750368	Pitx1	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr10_-_127288851_127288918	0.743969	Pitx1	ENSMUST00000156208.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6 	ENSMUST00000026476.6|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr3_+_79884496_79884571	0.716887	Pitx1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr7_-_133015248_133015329	0.709129	Pitx1	ENSMUST00000169570.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr2_-_18048784_18048822	0.707533	Pitx1	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr2_-_64097994_64098023	0.701316	Pitx1	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr7_-_133123770_133123876	0.677069	Pitx1	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr7_+_101969796_101969843	0.674344	Pitx1	ENSMUST00000084852.5|Numa1|ENSMUSG00000066306.6|nuclear mitotic apparatus protein 1
mm10_v2_chrX_+_82948861_82948915	0.672118	Pitx1	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr2_-_101628930_101628954	0.656061	Pitx1	ENSMUST00000099682.2|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chr11_-_100472725_100472759	0.652123	Pitx1	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr4_+_129960760_129960808	0.638892	Pitx1	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr9_+_58134535_58134810	0.634011	Pitx1	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr15_+_36179530_36179701	0.607801	Pitx1	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr10_-_22149270_22149270	0.594392	Pitx1	ENSMUST00000179054.1|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene 	ENSMUST00000069372.6|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene
mm10_v2_chr6_+_4902913_4903014	0.577813	Pitx1	ENSMUST00000175889.1|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A 	ENSMUST00000168998.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr9_-_20976762_20976793	0.574081	Pitx1	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr4_+_84884418_84884465	0.542048	Pitx1	ENSMUST00000169371.2|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr11_+_87578384_87578470	0.509545	Pitx1	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chrX_-_100626568_100626611	0.507779	Pitx1	ENSMUST00000015812.5|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr3_+_79884576_79884597	0.507227	Pitx1	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chrX_+_7909542_7909542	0.504983	Pitx1	ENSMUST00000086274.2|Gm10490|ENSMUSG00000073290.1|predicted gene 10490
mm10_v2_chr7_-_15879844_15879968	0.504965	Pitx1	ENSMUST00000172758.1|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene 	ENSMUST00000044434.6|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene
mm10_v2_chr3_-_113630068_113630149	0.503086	Pitx1	ENSMUST00000092154.3|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106536.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106535.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3
mm10_v2_chr2_-_101628958_101629014	0.497506	Pitx1	ENSMUST00000111231.3|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chrX_+_169685191_169685250	0.489052	Pitx1	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr7_+_35802593_35802593	0.478531	Pitx1	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr10_-_14718191_14718228	0.467676	Pitx1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr17_-_15375969_15375983	0.462871	Pitx1	ENSMUST00000014917.7|Dll1|ENSMUSG00000014773.7|delta-like 1 (Drosophila)
mm10_v2_chr3_+_28781305_28781344	0.447831	Pitx1	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr2_+_23068168_23068241	0.427222	Pitx1	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr10_+_90576872_90576992	0.417484	Pitx1	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_+_3330781_3330812	0.416841	Pitx1	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr18_-_15718046_15718046	0.411286	Pitx1	ENSMUST00000053017.6|Chst9|ENSMUSG00000047161.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
mm10_v2_chr17_+_7925990_7926006	0.409844	Pitx1	ENSMUST00000036370.7|Tagap|ENSMUSG00000033450.7|T cell activation Rho GTPase activating protein
mm10_v2_chr5_-_125294107_125294136	0.381206	Pitx1	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr3_+_103058302_103058352	0.370484	Pitx1	ENSMUST00000029445.6|Nras|ENSMUSG00000027852.8|neuroblastoma ras oncogene
mm10_v2_chr9_-_50617428_50617467	0.358153	Pitx1	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr11_+_115900125_115900202	0.353683	Pitx1	ENSMUST00000142089.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5 	ENSMUST00000131566.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5
mm10_v2_chr12_-_102439813_102439836	0.351297	Pitx1	ENSMUST00000021607.8|Lgmn|ENSMUSG00000021190.8|legumain
mm10_v2_chr9_-_50617228_50617289	0.341621	Pitx1	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr4_-_141053660_141053697	0.33934	Pitx1	ENSMUST00000040222.7|Crocc|ENSMUSG00000040860.10|ciliary rootlet coiled-coil, rootletin
mm10_v2_chr8_-_111259192_111259221	0.325121	Pitx1	ENSMUST00000169020.1|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1 	ENSMUST00000003404.8|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1
mm10_v2_chr11_+_23256001_23256105	0.317558	Pitx1	ENSMUST00000020538.6|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000109551.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102870.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102869.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr6_-_124840192_124840275	0.308039	Pitx1	ENSMUST00000024206.5|Gnb3|ENSMUSG00000023439.5|guanine nucleotide binding protein (G protein), beta 3
mm10_v2_chr11_-_106920359_106920643	0.300081	Pitx1	ENSMUST00000167787.1|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2 	ENSMUST00000092517.2|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr2_+_28506095_28506095	0.290241	Pitx1	ENSMUST00000074761.4|Gm10134|ENSMUSG00000063611.4|predicted gene 10134
mm10_v2_chr1_-_51915968_51916071	0.288429	Pitx1	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_+_125068118_125068133	0.269625	Pitx1	ENSMUST00000070353.3|Slc24a5|ENSMUSG00000035183.8|solute carrier family 24, member 5
mm10_v2_chr14_+_52110939_52110953	0.268418	Pitx1	ENSMUST00000111600.4|Rpgrip1|ENSMUSG00000057132.9|retinitis pigmentosa GTPase regulator interacting protein 1
mm10_v2_chr18_+_60925644_60925725	0.261052	Pitx1	ENSMUST00000115297.1|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr10_-_117376922_117376954	0.256723	Pitx1	ENSMUST00000177145.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176670.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr2_-_121456693_121456781	0.249487	Pitx1	ENSMUST00000110613.2|Serinc4|ENSMUSG00000046110.9|serine incorporator 4 	ENSMUST00000056312.3|Serinc4|ENSMUSG00000046110.9|serine incorporator 4
mm10_v2_chr4_-_140246751_140246793	0.238889	Pitx1	ENSMUST00000039331.8|Igsf21|ENSMUSG00000040972.8|immunoglobulin superfamily, member 21
mm10_v2_chr4_-_141053704_141053724	0.228623	Pitx1	ENSMUST00000102491.3|Crocc|ENSMUSG00000040860.10|ciliary rootlet coiled-coil, rootletin
mm10_v2_chr1_+_9545397_9545479	0.212464	Pitx1	ENSMUST00000072079.7|Rrs1|ENSMUSG00000061024.7|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm10_v2_chr7_+_73391160_73391296	0.200588	Pitx1	ENSMUST00000128471.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr6_+_136954521_136954529	0.19794	Pitx1	ENSMUST00000137768.1|Pde6h|ENSMUSG00000064330.7|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm10_v2_chr13_-_116309639_116309699	0.161816	Pitx1	ENSMUST00000036060.6|Isl1|ENSMUSG00000042258.7|ISL1 transcription factor, LIM/homeodomain
mm10_v2_chr4_+_109343029_109343081	0.159694	Pitx1	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr9_-_71163224_71163293	0.156863	Pitx1	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr10_-_117376955_117376978	0.148627	Pitx1	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr2_-_23040177_23040241	0.14807	Pitx1	ENSMUST00000114544.3|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000139038.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000126112.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000178908.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000078977.7|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000140164.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000149719.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr11_-_69398226_69398243	0.145041	Pitx1	ENSMUST00000050140.5|Tmem88|ENSMUSG00000045377.5|transmembrane protein 88
mm10_v2_chr1_+_87403705_87403726	0.142791	Pitx1	ENSMUST00000172736.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr12_-_79192248_79192293	0.137453	Pitx1	ENSMUST00000161204.1|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr1_-_13372434_13372457	0.115022	Pitx1	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr17_-_23586214_23586269	0.113575	Pitx1	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr2_-_24049389_24049400	0.113269	Pitx1	ENSMUST00000051416.5|Hnmt|ENSMUSG00000026986.8|histamine N-methyltransferase
mm10_v2_chr2_-_23040137_23040174	0.10541	Pitx1	ENSMUST00000091394.6|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000093171.6|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr4_+_15881255_15881272	0.101429	Pitx1	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr6_+_122707489_122707608	0.101401	Pitx1	ENSMUST00000112581.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000112580.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000012540.4|Nanog|ENSMUSG00000012396.6|Nanog homeobox
mm10_v2_chr19_-_32712287_32712336	0.0916848	Pitx1	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chrX_+_56779699_56779819	0.0830058	Pitx1	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr18_+_42394539_42394575	0.0808053	Pitx1	ENSMUST00000025374.3|Pou4f3|ENSMUSG00000024497.3|POU domain, class 4, transcription factor 3
mm10_v2_chr1_+_179961110_179961110	0.0764347	Pitx1	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr5_+_64159429_64159451	0.0726837	Pitx1	ENSMUST00000043893.6|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr6_+_4903298_4903346	0.0682324	Pitx1	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr8_-_113848615_113848774	0.0588483	Pitx1	ENSMUST00000093113.4|Adamts18|ENSMUSG00000053399.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm10_v2_chr11_-_29247208_29247409	0.0586777	Pitx1	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr18_+_75367529_75367561	0.053148	Pitx1	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr11_-_22982090_22982382	0.0471809	Pitx1	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr11_+_69995777_69995870	0.0285695	Pitx1	ENSMUST00000018716.3|Phf23|ENSMUSG00000018572.4|PHD finger protein 23
mm10_v2_chr17_-_35132050_35132050	0.023539	Pitx1	ENSMUST00000025249.6|Apom|ENSMUSG00000024391.7|apolipoprotein M
mm10_v2_chr11_-_68973840_68973864	0.016205	Pitx1	ENSMUST00000038644.4|Rangrf|ENSMUSG00000032892.8|RAN guanine nucleotide release factor
mm10_v2_chr10_+_94198955_94199043	0.0137099	Pitx1	ENSMUST00000020209.9|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENSMUST00000179990.1|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm10_v2_chr7_-_25398697_25398719	0.0113953	Pitx1	ENSMUST00000105177.2|Lipe|ENSMUSG00000003123.9|lipase, hormone sensitive 	ENSMUST00000149349.1|Lipe|ENSMUSG00000003123.9|lipase, hormone sensitive
mm10_v2_chr11_+_69995874_69995897	0.0038924	Pitx1	ENSMUST00000101526.2|Phf23|ENSMUSG00000018572.4|PHD finger protein 23
mm10_v2_chr1_-_44218952_44218961	0.000936409	Pitx1	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
