mm10_v2_chr5_+_140607334_140607352	7.5978	Six6	ENSMUST00000031555.1|Lfng|ENSMUSG00000029570.1|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr11_+_98412461_98412566	5.58593	Six6	ENSMUST00000058295.5|Erbb2|ENSMUSG00000062312.5|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm10_v2_chr6_-_23248264_23248390	5.47362	Six6	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr9_+_98422961_98422961	4.29628	Six6	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr18_+_56432116_56432163	4.0135	Six6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chrX_-_142966709_142966734	3.69096	Six6	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr9_-_114564315_114564369	3.5751	Six6	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr11_-_102365111_102365280	3.30965	Six6	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr1_+_139454747_139454825	2.99403	Six6	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr16_+_84774123_84774174	2.83876	Six6	ENSMUST00000114195.1|Jam2|ENSMUSG00000053062.9|junction adhesion molecule 2
mm10_v2_chr10_+_24595623_24595780	2.75394	Six6	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr7_+_46847128_46847150	2.62889	Six6	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr15_-_82244716_82244755	2.60739	Six6	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr11_+_78324200_78324236	2.55894	Six6	ENSMUST00000102478.3|Aldoc|ENSMUSG00000017390.9|aldolase C, fructose-bisphosphate
mm10_v2_chr1_+_45311538_45311638	2.45261	Six6	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr1_+_74713551_74713574	2.36114	Six6	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr10_+_128238034_128238069	2.17201	Six6	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr15_-_75894474_75894529	2.14204	Six6	ENSMUST00000023237.6|Naprt1|ENSMUSG00000022574.6|nicotinate phosphoribosyltransferase domain containing 1
mm10_v2_chr8_-_94918012_94918098	2.07833	Six6	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr18_-_88927447_88927481	2.07176	Six6	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr14_+_67234620_67234645	2.06243	Six6	ENSMUST00000176029.1|Ebf2|ENSMUSG00000022053.7|early B cell factor 2
mm10_v2_chr8_+_57455898_57455923	1.88221	Six6	ENSMUST00000034023.3|Scrg1|ENSMUSG00000031610.3|scrapie responsive gene 1
mm10_v2_chr4_-_97584605_97584610	1.88212	Six6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr9_+_104002546_104002776	1.81007	Six6	ENSMUST00000035167.8|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent) 	ENSMUST00000117054.1|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent)
mm10_v2_chr8_+_40423786_40423848	1.77255	Six6	ENSMUST00000049389.4|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000128166.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000167766.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2
mm10_v2_chr1_-_118982551_118982606	1.6882	Six6	ENSMUST00000159678.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr10_-_128180265_128180307	1.6728	Six6	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr17_-_62606679_62606707	1.66763	Six6	ENSMUST00000163332.1|Efna5|ENSMUSG00000090425.1|ephrin A5
mm10_v2_chr5_+_122210134_122210295	1.63716	Six6	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr4_-_97584612_97584643	1.62901	Six6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr4_+_134864536_134864601	1.61585	Six6	ENSMUST00000030627.7|Rhd|ENSMUSG00000028825.7|Rh blood group, D antigen
mm10_v2_chr12_+_52097737_52097775	1.56794	Six6	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr5_+_21543525_21543590	1.53207	Six6	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr17_+_43568641_43568676	1.53044	Six6	ENSMUST00000169694.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr17_+_43568096_43568137	1.5168	Six6	ENSMUST00000167214.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr19_-_53589067_53589067	1.49074	Six6	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr11_+_115564434_115564490	1.43858	Six6	ENSMUST00000021085.4|Nup85|ENSMUSG00000020739.5|nucleoporin 85
mm10_v2_chr17_+_43568269_43568303	1.43775	Six6	ENSMUST00000024706.5|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr17_+_43568475_43568493	1.38735	Six6	ENSMUST00000167418.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr15_-_76206309_76206357	1.36612	Six6	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr3_-_37724321_37724490	1.33006	Six6	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr1_-_165708088_165708099	1.31781	Six6	ENSMUST00000040357.8|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1 	ENSMUST00000097474.3|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1
mm10_v2_chr5_+_117319258_117319284	1.31655	Six6	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr13_+_65512678_65512678	1.30276	Six6	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr1_-_128359610_128359698	1.29724	Six6	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr12_+_83987854_83987898	1.26146	Six6	ENSMUST00000021649.7|Acot2|ENSMUSG00000021226.7|acyl-CoA thioesterase 2
mm10_v2_chr15_+_55557575_55557604	1.24616	Six6	ENSMUST00000170046.1|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr4_-_43653560_43653594	1.20979	Six6	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr4_-_43653542_43653557	1.20903	Six6	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr15_+_55557399_55557436	1.20053	Six6	ENSMUST00000022998.7|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr16_-_65562686_65562769	1.15768	Six6	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr9_-_121839460_121839465	1.14959	Six6	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr19_-_55315980_55316038	1.1324	Six6	ENSMUST00000076891.5|Zdhhc6|ENSMUSG00000024982.9|zinc finger, DHHC domain containing 6
mm10_v2_chr17_+_35241838_35241870	1.11778	Six6	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr5_+_104046869_104046899	1.10375	Six6	ENSMUST00000031250.7|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr17_+_35241746_35241778	1.07486	Six6	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr7_-_130547358_130547386	1.07182	Six6	ENSMUST00000160289.1|Nsmce4a|ENSMUSG00000040331.9|non-SMC element 4 homolog A (S. cerevisiae)
mm10_v2_chr18_+_14424821_14424868	1.0461	Six6	ENSMUST00000069552.5|Gm5160|ENSMUSG00000055795.5|predicted gene 5160
mm10_v2_chr17_+_40811089_40811133	1.01982	Six6	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr8_+_69832633_69832712	0.963197	Six6	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr15_+_98571004_98571026	0.953059	Six6	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr13_-_66227573_66227573	0.939041	Six6	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr3_+_130068390_130068412	0.938845	Six6	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chr13_+_43785107_43785160	0.924082	Six6	ENSMUST00000015540.2|Cd83|ENSMUSG00000015396.3|CD83 antigen
mm10_v2_chr5_-_31154152_31154253	0.912805	Six6	ENSMUST00000114632.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000114631.2|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000067186.6|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000137165.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000131391.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000141823.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000154241.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein
mm10_v2_chr3_-_85887472_85887516	0.911086	Six6	ENSMUST00000154148.1|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000033643.5|Glt28d2|ENSMUSG00000031286.5|glycosyltransferase 28 domain containing 2
mm10_v2_chr16_+_10835046_10835084	0.868675	Six6	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr8_+_61487715_61487751	0.866837	Six6	ENSMUST00000034058.6|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4 	ENSMUST00000126575.1|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4
mm10_v2_chrX_-_74373260_74373349	0.864125	Six6	ENSMUST00000073067.4|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3 	ENSMUST00000037967.5|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr7_-_35647127_35647209	0.8451	Six6	ENSMUST00000120714.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr2_-_13271268_13271348	0.83363	Six6	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr4_+_156013835_156013849	0.825885	Six6	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr8_-_4275886_4275915	0.816221	Six6	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chrX_+_169685191_169685250	0.792695	Six6	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr7_-_104315455_104315463	0.766973	Six6	ENSMUST00000106837.1|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000106839.2|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000070943.6|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A
mm10_v2_chr2_-_13271419_13271437	0.757016	Six6	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr14_-_77036081_77036081	0.74555	Six6	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr6_-_50382831_50382847	0.73739	Six6	ENSMUST00000114468.2|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr7_+_75610038_75610080	0.721589	Six6	ENSMUST00000125771.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr3_+_146220955_146221009	0.713939	Six6	ENSMUST00000039164.2|Lpar3|ENSMUSG00000036832.4|lysophosphatidic acid receptor 3
mm10_v2_chr12_+_84773262_84773319	0.686392	Six6	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr7_-_101903783_101903786	0.680262	Six6	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr17_+_57279094_57279127	0.640631	Six6	ENSMUST00000169220.2|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000005889.9|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000112870.4|Vav1|ENSMUSG00000034116.11|vav 1 oncogene
mm10_v2_chr7_-_141168671_141168936	0.620517	Six6	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chrX_-_7947848_7947889	0.619405	Six6	ENSMUST00000115642.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000033501.8|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000145675.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr8_-_106573461_106573462	0.609153	Six6	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr11_+_100319880_100319905	0.609033	Six6	ENSMUST00000049385.7|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr5_+_123907175_123907292	0.607397	Six6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr5_+_121204477_121204499	0.606582	Six6	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr9_-_66975387_66975484	0.599868	Six6	ENSMUST00000034929.6|Lactb|ENSMUSG00000032370.7|lactamase, beta
mm10_v2_chr9_+_77921908_77921932	0.5704	Six6	ENSMUST00000133757.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr19_+_8764934_8765034	0.567974	Six6	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr10_+_73821857_73821883	0.565905	Six6	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr15_+_79895017_79895036	0.560281	Six6	ENSMUST00000023054.7|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chrX_-_74373218_74373249	0.557966	Six6	ENSMUST00000178691.1|Ubl4|ENSMUSG00000015290.9|ubiquitin-like 4 	ENSMUST00000114146.1|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr7_+_110627650_110627669	0.549544	Six6	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr5_+_140419248_140419377	0.543563	Six6	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr3_+_85574109_85574148	0.530177	Six6	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr19_-_4625612_4625658	0.522074	Six6	ENSMUST00000025823.3|Rce1|ENSMUSG00000024889.3|RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
mm10_v2_chr3_+_108571699_108571699	0.494402	Six6	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chrX_-_7947553_7947674	0.476379	Six6	ENSMUST00000133349.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr18_+_35553401_35553421	0.465719	Six6	ENSMUST00000181664.1|Snhg4|ENSMUSG00000097769.1|small nucleolar RNA host gene 4 (non-protein coding)
mm10_v2_chr2_+_70661556_70661692	0.462842	Six6	ENSMUST00000112201.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000028509.4|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000133432.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000112205.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2
mm10_v2_chr1_+_97770158_97770209	0.460143	Six6	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr12_+_105705970_105705987	0.453739	Six6	ENSMUST00000040876.5|Ak7|ENSMUSG00000041323.5|adenylate kinase 7
mm10_v2_chr11_-_106272927_106273006	0.428407	Six6	ENSMUST00000021052.9|Smarcd2|ENSMUSG00000078619.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm10_v2_chr5_+_144244432_144244457	0.419902	Six6	ENSMUST00000110695.1|Bri3|ENSMUSG00000047843.10|brain protein I3
mm10_v2_chr17_-_27909206_27909264	0.418865	Six6	ENSMUST00000114848.1|Taf11|ENSMUSG00000024218.6|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr4_+_11758147_11758220	0.417885	Six6	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr11_-_46166397_46166508	0.407533	Six6	ENSMUST00000020679.2|Nipal4|ENSMUSG00000020411.2|NIPA-like domain containing 4
mm10_v2_chrY_-_6237995_6237995	0.401723	Six6	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr3_+_88207308_88207328	0.401226	Six6	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr6_-_81965925_81965962	0.400106	Six6	ENSMUST00000032124.8|Mrpl19|ENSMUSG00000030045.10|mitochondrial ribosomal protein L19
mm10_v2_chr6_-_8259098_8259173	0.388178	Six6	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr16_-_31275277_31275290	0.387869	Six6	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr10_+_80603253_80603297	0.38482	Six6	ENSMUST00000180350.1|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr13_+_100124850_100124924	0.365427	Six6	ENSMUST00000022147.8|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000091321.5|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000143937.1|Smn1|ENSMUSG00000021645.10|survival motor neuron 1
mm10_v2_chr9_-_50528641_50528698	0.361066	Six6	ENSMUST00000034570.5|Pts|ENSMUSG00000032067.5|6-pyruvoyl-tetrahydropterin synthase
mm10_v2_chr8_+_69822429_69822592	0.348078	Six6	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chrM_+_2743_2761	0.327209	Six6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chrX_-_7947763_7947776	0.312858	Six6	ENSMUST00000154244.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr8_+_105373265_105373277	0.297374	Six6	ENSMUST00000160650.1|Plekhg4|ENSMUSG00000014782.9|pleckstrin homology domain containing, family G (with RhoGef domain) member 4
mm10_v2_chr16_-_18876655_18876767	0.292009	Six6	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr4_-_42084291_42084291	0.270252	Six6	ENSMUST00000177937.1|Gm21968|ENSMUSG00000095881.1|predicted gene, 21968
mm10_v2_chr2_+_30281043_30281043	0.270091	Six6	ENSMUST00000143119.2|RP23-395P6.9|ENSMUSG00000098794.1|RP23-395P6.9
mm10_v2_chr5_-_88527841_88527891	0.267841	Six6	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr3_-_9004686_9004750	0.255301	Six6	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr11_-_99230998_99231019	0.229303	Six6	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr13_+_94083490_94083511	0.222347	Six6	ENSMUST00000156071.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr11_-_100650693_100650749	0.221878	Six6	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr12_-_87443800_87443850	0.221749	Six6	ENSMUST00000162961.1|Alkbh1|ENSMUSG00000079036.4|alkB, alkylation repair homolog 1 (E. coli)
mm10_v2_chr2_+_117249725_117249754	0.213112	Six6	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr3_-_106547726_106547802	0.203346	Six6	ENSMUST00000039153.7|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000148269.1|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000068301.4|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1
mm10_v2_chr12_-_113422730_113422744	0.19737	Six6	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr7_+_127800844_127800941	0.190918	Six6	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr18_+_74216118_74216145	0.18738	Six6	ENSMUST00000025444.6|Cxxc1|ENSMUSG00000024560.6|CXXC finger 1 (PHD domain)
mm10_v2_chr9_+_72958785_72958850	0.159577	Six6	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chrX_+_103414461_103414481	0.154777	Six6	ENSMUST00000033691.4|Tsx|ENSMUSG00000031329.4|testis specific X-linked gene
mm10_v2_chr1_-_165634451_165634576	0.146674	Six6	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chr16_-_90810365_90810429	0.146477	Six6	ENSMUST00000140920.1|Urb1|ENSMUSG00000039929.8|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm10_v2_chr11_+_60353324_60353408	0.13286	Six6	ENSMUST00000070805.6|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000094140.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108723.2|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48 	ENSMUST00000108722.4|Lrrc48|ENSMUSG00000056598.10|leucine rich repeat containing 48
mm10_v2_chr7_-_42578588_42578588	0.127166	Six6	ENSMUST00000179470.1|Gm21028|ENSMUSG00000094462.1|predicted gene, 21028
mm10_v2_chr9_-_88438940_88438958	0.120441	Six6	ENSMUST00000165315.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000173039.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr11_-_11627824_11627824	0.119915	Six6	ENSMUST00000081896.4|4930512M02Rik|ENSMUSG00000062511.6|RIKEN cDNA 4930512M02 gene
mm10_v2_chr8_+_84831522_84831522	0.115888	Six6	ENSMUST00000036734.5|Gadd45gip1|ENSMUSG00000033751.5|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm10_v2_chr2_-_114175321_114175344	0.106253	Six6	ENSMUST00000043160.6|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr7_+_30231884_30231948	0.0983107	Six6	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr17_-_23771543_23771595	0.0820058	Six6	ENSMUST00000086325.5|Flywch1|ENSMUSG00000040097.9|FLYWCH-type zinc finger 1
mm10_v2_chr17_+_55959146_55959187	0.0754276	Six6	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
mm10_v2_chr19_+_4154606_4154629	0.0733495	Six6	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr16_+_11203375_11203448	0.0708238	Six6	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr8_+_71951038_71951130	0.0694236	Six6	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr17_-_53539411_53539459	0.0514582	Six6	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr9_-_119341390_119341420	0.0463533	Six6	ENSMUST00000139870.1|Myd88|ENSMUSG00000032508.8|myeloid differentiation primary response gene 88
mm10_v2_chr7_+_81762925_81762943	0.0268184	Six6	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr7_-_126676428_126676439	0.0198364	Six6	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr18_+_12599894_12599926	0.0193247	Six6	ENSMUST00000169401.1|Ttc39c|ENSMUSG00000024424.8|tetratricopeptide repeat domain 39C
mm10_v2_chr19_-_4042165_4042242	0.0188947	Six6	ENSMUST00000042700.9|Gstp2|ENSMUSG00000038155.9|glutathione S-transferase, pi 2
mm10_v2_chr2_+_131491764_131491943	0.0103365	Six6	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr7_+_30232310_30232350	0.00649835	Six6	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr9_-_88438898_88438936	0.00478602	Six6	ENSMUST00000173011.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000174806.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr2_+_129800451_129800526	0.0018592	Six6	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
