mm10_v2_chrX_-_143933089_143933142	43.9799	Sox2	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chrX_-_143933204_143933311	41.1641	Sox2	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr17_-_79355082_79355103	35.6794	Sox2	ENSMUST00000068958.7|Cdc42ep3|ENSMUSG00000036533.8|CDC42 effector protein (Rho GTPase binding) 3
mm10_v2_chr10_+_29143996_29144126	34.51	Sox2	ENSMUST00000092629.2|Soga3|ENSMUSG00000038916.6|SOGA family member 3
mm10_v2_chr11_-_98329641_98329654	34.0163	Sox2	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr10_+_80300997_80301050	33.5608	Sox2	ENSMUST00000140828.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2 	ENSMUST00000138909.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr1_+_136131382_136131404	32.1847	Sox2	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chr10_-_29144194_29144194	29.8163	Sox2	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr7_+_99466004_99466032	26.1727	Sox2	ENSMUST00000037359.2|Klhl35|ENSMUSG00000035298.2|kelch-like 35
mm10_v2_chr8_+_45507768_45507818	24.7157	Sox2	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr10_-_84440591_84440604	23.4848	Sox2	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr1_-_12991109_12991177	23.3108	Sox2	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr4_-_20778527_20778593	22.9865	Sox2	ENSMUST00000119374.1|Nkain3|ENSMUSG00000055761.8|Na+/K+ transporting ATPase interacting 3
mm10_v2_chr8_-_69184177_69184240	22.9374	Sox2	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr8_-_33747724_33747781	21.7242	Sox2	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr5_-_22344690_22344710	21.2019	Sox2	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
mm10_v2_chr1_-_138842429_138842457	20.7193	Sox2	ENSMUST00000112026.2|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9 	ENSMUST00000019374.7|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chr2_-_65567465_65567495	20.1643	Sox2	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr2_-_65567505_65567627	20.0482	Sox2	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr8_+_34807287_34807310	19.9942	Sox2	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr7_-_74013676_74013699	19.7089	Sox2	ENSMUST00000026896.4|St8sia2|ENSMUSG00000025789.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm10_v2_chr18_-_43059418_43059471	19.6721	Sox2	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr2_+_155381808_155381884	19.4413	Sox2	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr4_+_48585276_48585365	19.385	Sox2	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr4_+_48585135_48585187	19.028	Sox2	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr4_+_48585193_48585215	19.0167	Sox2	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr11_+_58948890_58948920	18.5855	Sox2	ENSMUST00000078267.3|Hist3h2ba|ENSMUSG00000056895.3|histone cluster 3, H2ba
mm10_v2_chr4_-_129121889_129122063	18.4578	Sox2	ENSMUST00000139450.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000125931.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000116444.2|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr4_-_148130678_148130706	18.4422	Sox2	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr4_+_43406435_43406615	18.0341	Sox2	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr10_-_122047293_122047322	17.9199	Sox2	ENSMUST00000020322.5|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1 	ENSMUST00000081688.6|Srgap1|ENSMUSG00000020121.9|SLIT-ROBO Rho GTPase activating protein 1
mm10_v2_chr18_+_37484955_37485028	17.8807	Sox2	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr1_+_34579693_34579751	17.7697	Sox2	ENSMUST00000052670.8|Amer3|ENSMUSG00000045174.8|APC membrane recruitment 3
mm10_v2_chr9_+_108826320_108826320	17.6825	Sox2	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr1_+_66322102_66322119	17.2558	Sox2	ENSMUST00000123647.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr1_-_64122256_64122321	17.1596	Sox2	ENSMUST00000135075.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr3_-_122619663_122619680	17.0888	Sox2	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr5_+_111417263_111417442	17.064	Sox2	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr2_+_68861564_68861586	17.049	Sox2	ENSMUST00000176018.1|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr2_+_55437100_55437182	16.8732	Sox2	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr18_-_23038656_23038676	16.8096	Sox2	ENSMUST00000081423.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr19_+_44992127_44992136	16.6888	Sox2	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr5_-_131538687_131538717	16.6604	Sox2	ENSMUST00000161374.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr10_+_127165118_127165225	16.6284	Sox2	ENSMUST00000006914.9|B4galnt1|ENSMUSG00000006731.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm10_v2_chr3_-_123690806_123690847	16.5994	Sox2	ENSMUST00000154668.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr10_+_26229707_26229763	16.5974	Sox2	ENSMUST00000060716.5|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3 	ENSMUST00000164660.1|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3
mm10_v2_chr6_-_56362356_56362519	16.4775	Sox2	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr4_+_9269285_9269335	16.2295	Sox2	ENSMUST00000038841.7|Clvs1|ENSMUSG00000041216.9|clavesin 1
mm10_v2_chr7_-_25005895_25005937	16.1847	Sox2	ENSMUST00000102858.3|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENSMUST00000080882.6|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm10_v2_chr4_+_116221590_116221618	16.1367	Sox2	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr2_+_146221921_146221921	16.0991	Sox2	ENSMUST00000089257.4|Insm1|ENSMUSG00000068154.4|insulinoma-associated 1
mm10_v2_chr5_+_75574916_75575001	16.0937	Sox2	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr8_-_109251698_109251728	16.0933	Sox2	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr10_+_69706326_69706382	15.707	Sox2	ENSMUST00000182992.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr1_+_62703667_62703702	15.6022	Sox2	ENSMUST00000114155.1|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000027112.6|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000063594.6|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000114157.2|Nrp2|ENSMUSG00000025969.9|neuropilin 2
mm10_v2_chr5_+_37245792_37245883	15.3331	Sox2	ENSMUST00000031004.7|Crmp1|ENSMUSG00000029121.9|collapsin response mediator protein 1
mm10_v2_chr5_+_88583527_88583590	15.2472	Sox2	ENSMUST00000031229.6|Rufy3|ENSMUSG00000029291.7|RUN and FYVE domain containing 3
mm10_v2_chr14_+_61138445_61138495	15.2392	Sox2	ENSMUST00000089394.3|Sacs|ENSMUSG00000048279.11|sacsin 	ENSMUST00000119509.1|Sacs|ENSMUSG00000048279.11|sacsin
mm10_v2_chr2_-_160367057_160367073	14.9532	Sox2	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr5_-_114091358_114091404	14.9393	Sox2	ENSMUST00000150106.1|Svop|ENSMUSG00000042078.8|SV2 related protein
mm10_v2_chr11_+_24076529_24076563	14.9374	Sox2	ENSMUST00000148087.1|Gm12063|ENSMUSG00000085167.1|predicted gene 12063
mm10_v2_chr15_-_75905349_75905388	14.9302	Sox2	ENSMUST00000127550.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr2_-_79456750_79456761	14.9132	Sox2	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr13_+_88821472_88821520	14.7906	Sox2	ENSMUST00000118731.1|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3 	ENSMUST00000081769.6|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3
mm10_v2_chr15_-_39943963_39944029	14.7411	Sox2	ENSMUST00000110305.2|Lrp12|ENSMUSG00000022305.6|low density lipoprotein-related protein 12
mm10_v2_chr2_+_155382186_155382274	14.7137	Sox2	ENSMUST00000134218.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr3_-_122619442_122619553	14.6361	Sox2	ENSMUST00000162947.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr11_+_116918844_116918888	14.6084	Sox2	ENSMUST00000103027.3|Mgat5b|ENSMUSG00000043857.10|mannoside acetylglucosaminyltransferase 5, isoenzyme B
mm10_v2_chr3_+_102010138_102010171	14.4676	Sox2	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr9_+_59617284_59617301	14.3909	Sox2	ENSMUST00000026267.8|Parp6|ENSMUSG00000025237.9|poly (ADP-ribose) polymerase family, member 6 	ENSMUST00000050483.7|Parp6|ENSMUSG00000025237.9|poly (ADP-ribose) polymerase family, member 6
mm10_v2_chrX_+_48519245_48519285	14.3691	Sox2	ENSMUST00000033430.2|Rab33a|ENSMUSG00000031104.2|RAB33A, member of RAS oncogene family
mm10_v2_chr8_+_123411424_123411562	14.2917	Sox2	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr2_+_37516618_37516634	14.2146	Sox2	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr12_-_31713873_31713947	14.1922	Sox2	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr7_-_132317198_132317228	14.1893	Sox2	ENSMUST00000080215.5|Chst15|ENSMUSG00000030930.7|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm10_v2_chr11_+_80477015_80477085	14.1553	Sox2	ENSMUST00000053413.10|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35) 	ENSMUST00000147694.1|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
mm10_v2_chr7_+_29303958_29303983	14.152	Sox2	ENSMUST00000049977.6|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr17_-_56476462_56476483	14.0202	Sox2	ENSMUST00000067538.5|Ptprs|ENSMUSG00000013236.10|protein tyrosine phosphatase, receptor type, S
mm10_v2_chr5_-_112228633_112228680	13.9848	Sox2	ENSMUST00000182699.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding) 	ENSMUST00000182258.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding) 	ENSMUST00000183036.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr13_+_88821606_88821642	13.8682	Sox2	ENSMUST00000043111.6|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3
mm10_v2_chr6_+_17065129_17065233	13.8189	Sox2	ENSMUST00000115467.4|Tes|ENSMUSG00000029552.13|testis derived transcript 	ENSMUST00000154266.2|Tes|ENSMUSG00000029552.13|testis derived transcript 	ENSMUST00000076654.7|Tes|ENSMUSG00000029552.13|testis derived transcript
mm10_v2_chr3_-_108402589_108402589	13.7933	Sox2	ENSMUST00000147565.1|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr15_-_58214882_58214926	13.7898	Sox2	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr7_+_29303938_29303951	13.782	Sox2	ENSMUST00000108231.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr7_+_99381495_99381555	13.7069	Sox2	ENSMUST00000037528.8|Gdpd5|ENSMUSG00000035314.8|glycerophosphodiester phosphodiesterase domain containing 5
mm10_v2_chr6_+_54681687_54681783	13.6766	Sox2	ENSMUST00000046276.6|2410066E13Rik|ENSMUSG00000038065.7|RIKEN cDNA 2410066E13 gene
mm10_v2_chr17_+_80944611_80944644	13.6689	Sox2	ENSMUST00000025092.4|Tmem178|ENSMUSG00000024245.4|transmembrane protein 178
mm10_v2_chr2_+_68861433_68861510	13.6634	Sox2	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr9_+_74976096_74976177	13.6099	Sox2	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr17_-_25433263_25433307	13.6093	Sox2	ENSMUST00000159623.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr16_+_20097554_20097596	13.6048	Sox2	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr2_-_156312470_156312704	13.5381	Sox2	ENSMUST00000079125.6|Scand1|ENSMUSG00000046229.9|SCAN domain-containing 1
mm10_v2_chr11_+_104231390_104231453	13.5286	Sox2	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr8_-_84773381_84773427	13.5206	Sox2	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr5_+_34549595_34549688	13.4655	Sox2	ENSMUST00000179943.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr8_-_84237042_84237061	13.4489	Sox2	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr9_+_118478344_118478451	13.4192	Sox2	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr6_-_13839916_13839942	13.3864	Sox2	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr12_+_29528382_29528468	13.3772	Sox2	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr2_-_77280589_77280648	13.372	Sox2	ENSMUST00000102659.1|Sestd1|ENSMUSG00000042272.11|SEC14 and spectrin domains 1
mm10_v2_chr13_-_54749627_54749697	13.3307	Sox2	ENSMUST00000099506.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr6_-_18514802_18514869	13.2399	Sox2	ENSMUST00000090601.5|Cttnbp2|ENSMUSG00000000416.10|cortactin binding protein 2
mm10_v2_chr11_+_104231573_104231584	13.2218	Sox2	ENSMUST00000132977.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000132245.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000100347.4|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr6_-_88875035_88875053	13.1851	Sox2	ENSMUST00000145944.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr5_-_38159457_38159491	13.1631	Sox2	ENSMUST00000031009.4|Nsg1|ENSMUSG00000029126.4|neuron specific gene family member 1
mm10_v2_chr1_+_6487231_6487338	13.1497	Sox2	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr8_-_84937347_84937367	13.0773	Sox2	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr7_+_16944645_16944720	13.0347	Sox2	ENSMUST00000094807.5|Pnmal2|ENSMUSG00000070802.5|PNMA-like 2
mm10_v2_chr2_+_124610573_124610613	12.996	Sox2	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr1_+_66321708_66321719	12.9928	Sox2	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr3_-_116968969_116969004	12.9314	Sox2	ENSMUST00000143611.1|Palmd|ENSMUSG00000033377.8|palmdelphin 	ENSMUST00000040097.7|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr13_-_55488038_55488111	12.799	Sox2	ENSMUST00000109921.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000109923.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000021950.8|Dbn1|ENSMUSG00000034675.11|drebrin 1
mm10_v2_chr5_+_35893319_35893426	12.6667	Sox2	ENSMUST00000064571.4|Afap1|ENSMUSG00000029094.5|actin filament associated protein 1
mm10_v2_chr4_-_155043143_155043172	12.6396	Sox2	ENSMUST00000135665.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2
mm10_v2_chr10_-_81025406_81025411	12.5671	Sox2	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr14_+_60378242_60378292	12.4303	Sox2	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr13_-_49147931_49148037	12.3601	Sox2	ENSMUST00000162581.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110097.2|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000049265.8|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000035538.6|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110096.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000091623.3|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2
mm10_v2_chr10_+_106470281_106470367	12.3561	Sox2	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr8_-_83166170_83166170	12.2317	Sox2	ENSMUST00000098605.2|Gm10645|ENSMUSG00000074228.2|predicted gene 10645
mm10_v2_chr4_+_116221689_116221698	12.2013	Sox2	ENSMUST00000106490.2|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr8_-_122699066_122699119	12.1955	Sox2	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr8_+_45628176_45628219	12.178	Sox2	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr3_+_95160449_95160505	12.143	Sox2	ENSMUST00000090823.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000090821.3|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr7_-_16874845_16874889	12.0898	Sox2	ENSMUST00000181501.1|9330104G04Rik|ENSMUSG00000097842.1|RIKEN cDNA 9330104G04 gene
mm10_v2_chr5_+_3928033_3928178	12.0841	Sox2	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr7_-_142095266_142095306	12.0787	Sox2	ENSMUST00000039926.3|Dusp8|ENSMUSG00000037887.5|dual specificity phosphatase 8
mm10_v2_chr10_+_69925766_69925786	12.0695	Sox2	ENSMUST00000182269.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183261.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183074.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr4_+_116221633_116221661	12.0456	Sox2	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr11_+_104231515_104231528	12.0289	Sox2	ENSMUST00000106993.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr10_+_43579161_43579178	11.976	Sox2	ENSMUST00000058714.8|Cd24a|ENSMUSG00000047139.8|CD24a antigen
mm10_v2_chr18_-_43393346_43393381	11.9679	Sox2	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr3_-_116968827_116968858	11.9653	Sox2	ENSMUST00000119557.1|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr4_-_82705735_82705754	11.9343	Sox2	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr3_-_38484831_38484864	11.9227	Sox2	ENSMUST00000120875.1|Ankrd50|ENSMUSG00000044864.10|ankyrin repeat domain 50
mm10_v2_chr12_-_14152038_14152069	11.9137	Sox2	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr17_+_52602700_52602717	11.9037	Sox2	ENSMUST00000039366.10|Kcnh8|ENSMUSG00000035580.10|potassium voltage-gated channel, subfamily H (eag-related), member 8
mm10_v2_chrX_+_109095359_109095391	11.9005	Sox2	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chr9_-_50728067_50728129	11.8993	Sox2	ENSMUST00000117646.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr10_-_83533383_83533406	11.8717	Sox2	ENSMUST00000146640.1|Aldh1l2|ENSMUSG00000020256.8|aldehyde dehydrogenase 1 family, member L2
mm10_v2_chr9_-_50727921_50728008	11.8669	Sox2	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr9_+_102718424_102718490	11.8373	Sox2	ENSMUST00000156485.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000145937.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000134483.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr6_+_61180313_61180400	11.8218	Sox2	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr16_-_18629864_18629951	11.805	Sox2	ENSMUST00000096987.5|Sept5|ENSMUSG00000072214.6|septin 5
mm10_v2_chr10_+_69925484_69925532	11.7843	Sox2	ENSMUST00000182692.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092433.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr9_-_103761820_103761847	11.7235	Sox2	ENSMUST00000049452.8|Tmem108|ENSMUSG00000042757.9|transmembrane protein 108
mm10_v2_chr17_-_35910032_35910076	11.6628	Sox2	ENSMUST00000141662.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000056034.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000077494.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000149277.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000061052.5|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr1_-_87156127_87156165	11.6352	Sox2	ENSMUST00000160810.1|Ecel1|ENSMUSG00000026247.7|endothelin converting enzyme-like 1
mm10_v2_chr10_+_69925954_69926133	11.6042	Sox2	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_-_47132698_47132717	11.5849	Sox2	ENSMUST00000033142.5|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr8_+_70863127_70863127	11.5575	Sox2	ENSMUST00000050921.2|A230052G05Rik|ENSMUSG00000020887.3|RIKEN cDNA A230052G05 gene
mm10_v2_chr8_+_69808672_69808742	11.5453	Sox2	ENSMUST00000036074.8|Gmip|ENSMUSG00000036246.8|Gem-interacting protein 	ENSMUST00000123453.1|Gmip|ENSMUSG00000036246.8|Gem-interacting protein
mm10_v2_chr4_-_91376433_91376477	11.4923	Sox2	ENSMUST00000107109.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107111.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107120.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr15_+_82275197_82275281	11.4845	Sox2	ENSMUST00000116423.1|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr5_-_112228900_112228929	11.4348	Sox2	ENSMUST00000182509.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chrX_+_134295225_134295225	11.4299	Sox2	ENSMUST00000037687.7|Tmem35|ENSMUSG00000033578.7|transmembrane protein 35
mm10_v2_chr4_-_91376490_91376502	11.35	Sox2	ENSMUST00000107124.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr7_+_82867327_82867357	11.3068	Sox2	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr5_+_3928267_3928300	11.255	Sox2	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr4_-_20778852_20778876	11.2415	Sox2	ENSMUST00000102998.3|Nkain3|ENSMUSG00000055761.8|Na+/K+ transporting ATPase interacting 3
mm10_v2_chr3_+_88621436_88621555	11.218	Sox2	ENSMUST00000170653.2|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000177303.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr3_-_95228636_95228719	11.2024	Sox2	ENSMUST00000065482.5|Mllt11|ENSMUSG00000053192.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm10_v2_chr11_+_104231465_104231507	11.0738	Sox2	ENSMUST00000145227.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr5_-_136244865_136244908	11.0671	Sox2	ENSMUST00000005188.9|Sh2b2|ENSMUSG00000005057.9|SH2B adaptor protein 2
mm10_v2_chr3_-_84270782_84270794	10.9331	Sox2	ENSMUST00000054990.4|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr2_+_181763315_181763335	10.9134	Sox2	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr5_+_33983437_33983529	10.9123	Sox2	ENSMUST00000114384.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000094869.5|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000114383.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr16_+_18127607_18127649	10.8804	Sox2	ENSMUST00000059589.5|Rtn4r|ENSMUSG00000043811.5|reticulon 4 receptor
mm10_v2_chr1_+_17145357_17145431	10.8693	Sox2	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr7_+_29309429_29309513	10.82	Sox2	ENSMUST00000137848.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr12_+_24974914_24974948	10.7796	Sox2	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr4_+_107830958_107830985	10.7606	Sox2	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr12_+_95692212_95692246	10.7195	Sox2	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr6_+_51432663_51432674	10.707	Sox2	ENSMUST00000005103.5|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chr7_+_80860909_80860972	10.6244	Sox2	ENSMUST00000132163.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2 	ENSMUST00000147125.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2
mm10_v2_chr9_+_118478851_118478866	10.5788	Sox2	ENSMUST00000150633.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr1_+_135584773_135584773	10.5748	Sox2	ENSMUST00000067468.4|Gm4793|ENSMUSG00000054412.4|predicted gene 4793
mm10_v2_chr19_-_46327121_46327156	10.5727	Sox2	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr18_-_77565050_77565162	10.4549	Sox2	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr11_-_78497458_78497539	10.4405	Sox2	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr6_-_88874597_88874796	10.4122	Sox2	ENSMUST00000061262.4|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000140455.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000145780.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr11_-_78497734_78497793	10.4078	Sox2	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr2_-_152830615_152830680	10.3557	Sox2	ENSMUST00000146380.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134902.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134357.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000109820.3|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr6_+_39873271_39873271	10.3422	Sox2	ENSMUST00000180886.1|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr1_-_36557517_36557561	10.3344	Sox2	ENSMUST00000114990.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000128104.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000027295.4|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr6_+_54039558_54039575	10.3278	Sox2	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr10_+_17723220_17723229	10.3012	Sox2	ENSMUST00000038107.7|Cited2|ENSMUSG00000039910.9|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm10_v2_chr15_-_99705490_99705490	10.212	Sox2	ENSMUST00000163472.2|Gm17349|ENSMUSG00000091604.2|predicted gene, 17349
mm10_v2_chr10_-_83534130_83534141	10.1972	Sox2	ENSMUST00000020497.7|Aldh1l2|ENSMUSG00000020256.8|aldehyde dehydrogenase 1 family, member L2
mm10_v2_chr2_+_32621750_32621774	10.1715	Sox2	ENSMUST00000113278.2|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr2_-_33942111_33942151	10.149	Sox2	ENSMUST00000130988.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000127936.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000134271.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403
mm10_v2_chr17_-_25433775_25433790	10.0251	Sox2	ENSMUST00000159610.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000159048.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000078496.5|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr18_+_36939178_36939318	10.0116	Sox2	ENSMUST00000115662.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr10_+_61171954_61171986	10.0057	Sox2	ENSMUST00000122261.1|Tbata|ENSMUSG00000020096.13|thymus, brain and testes associated 	ENSMUST00000121297.1|Tbata|ENSMUSG00000020096.13|thymus, brain and testes associated 	ENSMUST00000035894.5|Tbata|ENSMUSG00000020096.13|thymus, brain and testes associated
mm10_v2_chr18_+_37489465_37489465	9.99694	Sox2	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr15_-_79742518_79742562	9.97718	Sox2	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr2_+_163438455_163438536	9.96097	Sox2	ENSMUST00000109420.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000109421.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000018087.6|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000137070.1|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1
mm10_v2_chr9_-_22307638_22307694	9.95019	Sox2	ENSMUST00000086278.6|Zfp810|ENSMUSG00000066829.6|zinc finger protein 810
mm10_v2_chr15_+_82274935_82275034	9.94704	Sox2	ENSMUST00000023095.6|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr2_-_181599128_181599235	9.92661	Sox2	ENSMUST00000060173.8|Samd10|ENSMUSG00000038605.11|sterile alpha motif domain containing 10
mm10_v2_chr13_-_54749849_54749893	9.924	Sox2	ENSMUST00000135343.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr8_-_119840522_119840579	9.86121	Sox2	ENSMUST00000168698.1|Cotl1|ENSMUSG00000031827.6|coactosin-like 1 (Dictyostelium) 	ENSMUST00000034285.6|Cotl1|ENSMUSG00000031827.6|coactosin-like 1 (Dictyostelium)
mm10_v2_chr13_+_97241096_97241116	9.84862	Sox2	ENSMUST00000041623.7|Enc1|ENSMUSG00000041773.7|ectodermal-neural cortex 1
mm10_v2_chr5_+_33983534_33983548	9.83312	Sox2	ENSMUST00000114382.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr2_-_119271202_119271272	9.83176	Sox2	ENSMUST00000037360.7|Rhov|ENSMUSG00000034226.7|ras homolog gene family, member V
mm10_v2_chr15_-_39943689_39943788	9.83073	Sox2	ENSMUST00000022916.5|Lrp12|ENSMUSG00000022305.6|low density lipoprotein-related protein 12
mm10_v2_chr12_-_72236692_72236724	9.77353	Sox2	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr11_+_67586520_67586546	9.65134	Sox2	ENSMUST00000108682.2|Gas7|ENSMUSG00000033066.9|growth arrest specific 7
mm10_v2_chr9_-_15045378_15045502	9.64698	Sox2	ENSMUST00000164273.1|Panx1|ENSMUSG00000031934.7|pannexin 1
mm10_v2_chr11_-_76468396_76468473	9.59591	Sox2	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr2_-_151973387_151973399	9.59409	Sox2	ENSMUST00000109863.1|Fam110a|ENSMUSG00000027459.10|family with sequence similarity 110, member A
mm10_v2_chr2_+_52857844_52857868	9.58861	Sox2	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chr9_+_58554799_58554799	9.54818	Sox2	ENSMUST00000098676.2|Gm10657|ENSMUSG00000074273.2|predicted gene 10657
mm10_v2_chr10_+_69925800_69925824	9.52993	Sox2	ENSMUST00000182029.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr16_-_30550560_30550594	9.48331	Sox2	ENSMUST00000140402.1|Tmem44|ENSMUSG00000022537.11|transmembrane protein 44
mm10_v2_chr2_-_130839683_130839696	9.46302	Sox2	ENSMUST00000119422.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene
mm10_v2_chr16_+_78301673_78301760	9.43624	Sox2	ENSMUST00000114229.2|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr16_-_34513944_34514056	9.42505	Sox2	ENSMUST00000151491.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114960.2|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr12_+_76072016_76072079	9.4092	Sox2	ENSMUST00000131480.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chrX_+_93675088_93675161	9.3937	Sox2	ENSMUST00000045898.3|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr17_-_35909626_35909700	9.39184	Sox2	ENSMUST00000141132.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr15_-_79742493_79742511	9.37121	Sox2	ENSMUST00000100439.3|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr2_-_30474199_30474222	9.3644	Sox2	ENSMUST00000065134.2|Ier5l|ENSMUSG00000089762.2|immediate early response 5-like
mm10_v2_chr6_-_42693087_42693100	9.34238	Sox2	ENSMUST00000121083.1|Fam115a|ENSMUSG00000036667.8|family with sequence similarity 115, member A
mm10_v2_chr19_-_4943049_4943127	9.29987	Sox2	ENSMUST00000133254.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000120475.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000025834.7|Peli3|ENSMUSG00000024901.8|pellino 3
mm10_v2_chr17_-_43667015_43667163	9.22632	Sox2	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr1_-_132390301_132390373	9.19641	Sox2	ENSMUST00000132435.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr2_+_68117713_68117713	9.18889	Sox2	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr5_+_142702091_142702153	9.1732	Sox2	ENSMUST00000058418.7|Slc29a4|ENSMUSG00000050822.7|solute carrier family 29 (nucleoside transporters), member 4
mm10_v2_chr8_-_41054771_41054802	9.14302	Sox2	ENSMUST00000093534.4|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr9_+_18427543_18427543	9.09481	Sox2	ENSMUST00000053326.9|Gm5612|ENSMUSG00000074501.5|predicted gene 5612
mm10_v2_chrX_+_93654863_93654981	9.08491	Sox2	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr1_+_132191436_132191436	9.07578	Sox2	ENSMUST00000112357.2|Lemd1|ENSMUSG00000079330.2|LEM domain containing 1
mm10_v2_chr12_+_71309876_71309984	9.07406	Sox2	ENSMUST00000061273.5|Dact1|ENSMUSG00000044548.5|dapper homolog 1, antagonist of beta-catenin (xenopus) 	ENSMUST00000150639.1|Dact1|ENSMUSG00000044548.5|dapper homolog 1, antagonist of beta-catenin (xenopus)
mm10_v2_chr4_+_48049080_48049114	9.07367	Sox2	ENSMUST00000153369.1|Nr4a3|ENSMUSG00000028341.3|nuclear receptor subfamily 4, group A, member 3
mm10_v2_chr1_+_153749496_153749523	9.04742	Sox2	ENSMUST00000182722.1|Rnasel|ENSMUSG00000066800.5|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm10_v2_chr8_+_124793013_124793056	8.99753	Sox2	ENSMUST00000167588.1|Trim67|ENSMUSG00000036913.8|tripartite motif-containing 67
mm10_v2_chr2_-_151973840_151973966	8.99239	Sox2	ENSMUST00000109865.1|Fam110a|ENSMUSG00000027459.10|family with sequence similarity 110, member A 	ENSMUST00000109864.1|Fam110a|ENSMUSG00000027459.10|family with sequence similarity 110, member A
mm10_v2_chr7_-_47133395_47133437	8.95826	Sox2	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr12_+_52699297_52699411	8.94612	Sox2	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr6_+_127887582_127887639	8.94491	Sox2	ENSMUST00000032501.4|Tspan11|ENSMUSG00000030351.4|tetraspanin 11
mm10_v2_chr2_+_28513105_28513126	8.93324	Sox2	ENSMUST00000135803.1|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr4_-_130574150_130574237	8.92209	Sox2	ENSMUST00000105993.3|Nkain1|ENSMUSG00000078532.3|Na+/K+ transporting ATPase interacting 1
mm10_v2_chr16_-_34514084_34514128	8.90541	Sox2	ENSMUST00000089655.5|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr16_+_17070220_17070239	8.89918	Sox2	ENSMUST00000141959.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr2_+_4559742_4559756	8.89607	Sox2	ENSMUST00000176828.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr5_+_44100442_44100442	8.84259	Sox2	ENSMUST00000072800.4|Gm16401|ENSMUSG00000072962.2|predicted gene 16401
mm10_v2_chr3_+_7503423_7503503	8.84103	Sox2	ENSMUST00000051064.3|Zc2hc1a|ENSMUSG00000043542.7|zinc finger, C2HC-type containing 1A
mm10_v2_chr10_+_80299084_80299126	8.80079	Sox2	ENSMUST00000154212.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr7_+_126272589_126272619	8.79721	Sox2	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr17_+_35866056_35866085	8.77347	Sox2	ENSMUST00000122899.1|Ppp1r18|ENSMUSG00000034595.11|protein phosphatase 1, regulatory subunit 18
mm10_v2_chr8_+_124793061_124793092	8.75904	Sox2	ENSMUST00000041106.7|Trim67|ENSMUSG00000036913.8|tripartite motif-containing 67
mm10_v2_chr8_-_122678072_122678182	8.742	Sox2	ENSMUST00000006525.7|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) 	ENSMUST00000064674.6|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr1_+_153749414_153749442	8.73927	Sox2	ENSMUST00000086209.3|Rnasel|ENSMUSG00000066800.5|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm10_v2_chr11_-_98022594_98022671	8.72963	Sox2	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr5_+_148265202_148265263	8.69873	Sox2	ENSMUST00000110515.2|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr1_-_51915901_51915958	8.67877	Sox2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr17_-_29007925_29007962	8.65044	Sox2	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr17_+_37002610_37002670	8.59702	Sox2	ENSMUST00000173921.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57 	ENSMUST00000172580.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr1_+_15287259_15287259	8.59608	Sox2	ENSMUST00000175681.1|Kcnb2|ENSMUSG00000092083.3|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr8_+_123332676_123332740	8.59471	Sox2	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr1_+_66386968_66386999	8.59368	Sox2	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr10_-_62110945_62111060	8.56392	Sox2	ENSMUST00000142821.1|2010107G23Rik|ENSMUSG00000020083.7|RIKEN cDNA 2010107G23 gene 	ENSMUST00000124615.1|2010107G23Rik|ENSMUSG00000020083.7|RIKEN cDNA 2010107G23 gene 	ENSMUST00000064050.4|2010107G23Rik|ENSMUSG00000020083.7|RIKEN cDNA 2010107G23 gene 	ENSMUST00000125704.1|2010107G23Rik|ENSMUSG00000020083.7|RIKEN cDNA 2010107G23 gene 	ENSMUST00000142796.1|2010107G23Rik|ENSMUSG00000020083.7|RIKEN cDNA 2010107G23 gene
mm10_v2_chr5_-_112228934_112228975	8.55275	Sox2	ENSMUST00000181535.2|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr16_+_13986596_13986674	8.54773	Sox2	ENSMUST00000056521.5|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000118412.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000131608.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene
mm10_v2_chr17_+_37002574_37002596	8.52524	Sox2	ENSMUST00000173588.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr5_-_122779278_122779434	8.48807	Sox2	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr11_+_67586675_67586720	8.47572	Sox2	ENSMUST00000108680.1|Gas7|ENSMUSG00000033066.9|growth arrest specific 7
mm10_v2_chr6_+_51432678_51432784	8.46249	Sox2	ENSMUST00000160133.1|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chrX_-_167209149_167209164	8.45177	Sox2	ENSMUST00000112176.1|Tmsb4x|ENSMUSG00000049775.10|thymosin, beta 4, X chromosome
mm10_v2_chr8_+_11728105_11728143	8.43758	Sox2	ENSMUST00000110909.2|Arhgef7|ENSMUSG00000031511.8|Rho guanine nucleotide exchange factor (GEF7) 	ENSMUST00000033908.6|Arhgef7|ENSMUSG00000031511.8|Rho guanine nucleotide exchange factor (GEF7)
mm10_v2_chr6_-_42693030_42693070	8.4337	Sox2	ENSMUST00000045140.4|Fam115a|ENSMUSG00000036667.8|family with sequence similarity 115, member A
mm10_v2_chr6_+_65042575_65042667	8.42871	Sox2	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chr11_-_61175020_61175060	8.42839	Sox2	ENSMUST00000041683.8|Usp22|ENSMUSG00000042506.9|ubiquitin specific peptidase 22
mm10_v2_chrX_+_112600526_112600526	8.40208	Sox2	ENSMUST00000113409.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr8_+_12947935_12947962	8.39345	Sox2	ENSMUST00000110871.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr2_+_65930117_65930190	8.39211	Sox2	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr11_+_121237216_121237289	8.38742	Sox2	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr1_+_133246092_133246099	8.34324	Sox2	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr11_-_3863895_3863910	8.33814	Sox2	ENSMUST00000070552.7|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr4_-_63403330_63403354	8.31001	Sox2	ENSMUST00000035724.4|Akna|ENSMUSG00000039158.11|AT-hook transcription factor
mm10_v2_chr3_-_127499095_127499137	8.29561	Sox2	ENSMUST00000182594.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr10_+_61475782_61475834	8.24488	Sox2	ENSMUST00000049242.7|Lrrc20|ENSMUSG00000037151.7|leucine rich repeat containing 20
mm10_v2_chr16_+_17070127_17070215	8.23829	Sox2	ENSMUST00000115729.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr1_+_6734827_6734874	8.2294	Sox2	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr6_+_54040078_54040091	8.2044	Sox2	ENSMUST00000127323.2|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr10_-_49788743_49788769	8.20384	Sox2	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr8_-_123515333_123515437	8.1911	Sox2	ENSMUST00000177240.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr15_-_75566811_75566896	8.18131	Sox2	ENSMUST00000065417.8|Ly6h|ENSMUSG00000022577.10|lymphocyte antigen 6 complex, locus H
mm10_v2_chr1_+_66364623_66364663	8.16941	Sox2	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr5_+_34549568_34549581	8.14407	Sox2	ENSMUST00000118545.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr11_-_87074055_87074071	8.12129	Sox2	ENSMUST00000020804.7|Gdpd1|ENSMUSG00000061666.6|glycerophosphodiester phosphodiesterase domain containing 1
mm10_v2_chr7_+_64501949_64502048	8.10576	Sox2	ENSMUST00000138829.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr15_-_79658749_79658798	8.10333	Sox2	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr14_-_33447142_33447179	8.1001	Sox2	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr17_-_57087729_57087782	8.03195	Sox2	ENSMUST00000071135.5|Tubb4a|ENSMUSG00000062591.5|tubulin, beta 4A class IVA
mm10_v2_chr15_-_84855093_84855127	7.97568	Sox2	ENSMUST00000016768.5|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr1_-_173367638_173367695	7.9721	Sox2	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr2_-_113217051_113217094	7.96519	Sox2	ENSMUST00000080673.5|Ryr3|ENSMUSG00000057378.8|ryanodine receptor 3
mm10_v2_chr19_+_4756557_4756623	7.93779	Sox2	ENSMUST00000036744.7|Rbm4b|ENSMUSG00000033760.10|RNA binding motif protein 4B
mm10_v2_chr3_+_88615367_88615434	7.87418	Sox2	ENSMUST00000176539.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr10_+_79996479_79996505	7.87264	Sox2	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr4_-_110290884_110290913	7.83448	Sox2	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr10_-_81627797_81627797	7.83332	Sox2	ENSMUST00000042923.8|Sirt6|ENSMUSG00000034748.10|sirtuin 6
mm10_v2_chr11_-_3774706_3774738	7.79816	Sox2	ENSMUST00000155197.1|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr1_-_51915968_51916071	7.79392	Sox2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr2_-_121807024_121807087	7.76117	Sox2	ENSMUST00000138157.1|Frmd5|ENSMUSG00000027238.10|FERM domain containing 5
mm10_v2_chr12_-_101028983_101029042	7.7335	Sox2	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr2_+_180042496_180042562	7.72321	Sox2	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr5_+_90931196_90931311	7.67999	Sox2	ENSMUST00000071652.4|Mthfd2l|ENSMUSG00000029376.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
mm10_v2_chr2_+_32625431_32625442	7.63543	Sox2	ENSMUST00000113277.1|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr11_+_4883186_4883222	7.62276	Sox2	ENSMUST00000139737.1|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chrX_+_159840463_159840481	7.58906	Sox2	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr3_+_69316857_69316869	7.58789	Sox2	ENSMUST00000029355.6|Ppm1l|ENSMUSG00000027784.8|protein phosphatase 1 (formerly 2C)-like
mm10_v2_chr17_+_43801823_43801863	7.57572	Sox2	ENSMUST00000044895.5|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr14_+_61599493_61599548	7.56675	Sox2	ENSMUST00000039562.6|Trim13|ENSMUSG00000035235.6|tripartite motif-containing 13
mm10_v2_chr10_-_79874565_79874634	7.53586	Sox2	ENSMUST00000167250.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000092325.4|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr18_+_23954668_23954704	7.52717	Sox2	ENSMUST00000060762.4|Zfp397|ENSMUSG00000024276.6|zinc finger protein 397
mm10_v2_chr5_+_148265307_148265345	7.51629	Sox2	ENSMUST00000110514.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr2_-_25983056_25983154	7.51132	Sox2	ENSMUST00000127823.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000134882.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr3_+_98382538_98382553	7.49769	Sox2	ENSMUST00000178372.1|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr11_+_46055973_46056068	7.47249	Sox2	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr6_+_15185456_15185563	7.47226	Sox2	ENSMUST00000115472.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115474.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000031545.7|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000137628.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr3_+_98382438_98382520	7.45076	Sox2	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chrX_+_161717498_161717627	7.4207	Sox2	ENSMUST00000061514.7|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr3_+_88532314_88532396	7.42063	Sox2	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chr14_+_31019159_31019178	7.42061	Sox2	ENSMUST00000112094.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000144009.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr6_-_72958097_72958302	7.41885	Sox2	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr15_-_102722150_102722178	7.41721	Sox2	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr6_-_72958465_72958496	7.41391	Sox2	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr5_+_30711564_30711586	7.41154	Sox2	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr3_-_107931579_107931742	7.40602	Sox2	ENSMUST00000133947.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000124215.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106688.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106687.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr11_-_23633621_23633639	7.37071	Sox2	ENSMUST00000180260.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000141353.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000131612.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000109532.2|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene
mm10_v2_chr4_-_149676043_149676065	7.36922	Sox2	ENSMUST00000118704.1|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm10_v2_chr9_+_99243421_99243474	7.3486	Sox2	ENSMUST00000093795.3|Cep70|ENSMUSG00000056267.8|centrosomal protein 70
mm10_v2_chr6_-_83121385_83121559	7.3408	Sox2	ENSMUST00000146328.1|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000113936.3|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000032111.4|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1
mm10_v2_chr3_+_153973436_153973520	7.33848	Sox2	ENSMUST00000089948.5|Slc44a5|ENSMUSG00000028360.9|solute carrier family 44, member 5
mm10_v2_chr8_+_35587780_35587825	7.33362	Sox2	ENSMUST00000037666.5|Mfhas1|ENSMUSG00000070056.5|malignant fibrous histiocytoma amplified sequence 1
mm10_v2_chr4_+_54945038_54945082	7.32362	Sox2	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr5_+_93268247_93268314	7.29199	Sox2	ENSMUST00000121127.1|Ccng2|ENSMUSG00000029385.8|cyclin G2
mm10_v2_chr12_+_3365108_3365142	7.22938	Sox2	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr8_-_105289465_105289541	7.2249	Sox2	ENSMUST00000171788.1|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene 	ENSMUST00000014981.6|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene
mm10_v2_chr18_+_37477768_37477835	7.20718	Sox2	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr15_-_79658889_79658956	7.20597	Sox2	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr10_-_79874233_79874439	7.20405	Sox2	ENSMUST00000166023.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000167707.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000165601.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr5_-_134552414_134552444	7.16521	Sox2	ENSMUST00000100647.2|Clip2|ENSMUSG00000063146.5|CAP-GLY domain containing linker protein 2 	ENSMUST00000036999.6|Clip2|ENSMUSG00000063146.5|CAP-GLY domain containing linker protein 2
mm10_v2_chr16_+_23224724_23224804	7.14751	Sox2	ENSMUST00000023601.7|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr10_+_26078255_26078255	7.1042	Sox2	ENSMUST00000041011.3|Gm9767|ENSMUSG00000039098.3|predicted gene 9767
mm10_v2_chr5_+_148265265_148265305	7.09626	Sox2	ENSMUST00000071878.5|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr2_-_6721890_6721928	7.06848	Sox2	ENSMUST00000114927.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr10_-_8518801_8518851	7.05802	Sox2	ENSMUST00000061601.7|Ust|ENSMUSG00000047712.7|uronyl-2-sulfotransferase
mm10_v2_chr15_+_98634743_98634778	7.04312	Sox2	ENSMUST00000003442.7|Cacnb3|ENSMUSG00000003352.7|calcium channel, voltage-dependent, beta 3 subunit
mm10_v2_chr1_+_133045984_133046082	7.03662	Sox2	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr10_+_80148263_80148279	7.03578	Sox2	ENSMUST00000099492.3|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000042057.5|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr7_+_141949846_141949868	7.0354	Sox2	ENSMUST00000172652.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr11_-_102447647_102447682	7.01028	Sox2	ENSMUST00000049057.4|Fam171a2|ENSMUSG00000034685.4|family with sequence similarity 171, member A2
mm10_v2_chr7_+_64502090_64502155	6.96245	Sox2	ENSMUST00000137732.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr8_+_70697739_70697739	6.96137	Sox2	ENSMUST00000095267.4|Jund|ENSMUSG00000071076.5|Jun proto-oncogene related gene d
mm10_v2_chr18_-_46212595_46212634	6.95775	Sox2	ENSMUST00000037011.4|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr2_-_6884940_6884957	6.92789	Sox2	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr13_+_42709482_42709581	6.92596	Sox2	ENSMUST00000066928.5|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1 	ENSMUST00000148891.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr14_+_59201418_59201503	6.91948	Sox2	ENSMUST00000140136.2|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 	ENSMUST00000142326.1|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm10_v2_chr13_+_43615710_43615788	6.89665	Sox2	ENSMUST00000059986.2|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr5_-_147076482_147076586	6.82076	Sox2	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chr11_+_95010277_95010293	6.81248	Sox2	ENSMUST00000124735.1|Samd14|ENSMUSG00000047181.6|sterile alpha motif domain containing 14
mm10_v2_chr4_-_118179628_118179682	6.80625	Sox2	ENSMUST00000097911.2|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr5_+_30711849_30711905	6.78084	Sox2	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr4_-_32923455_32923530	6.76101	Sox2	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr8_-_8660773_8660773	6.75725	Sox2	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr13_+_43615950_43615991	6.75667	Sox2	ENSMUST00000161817.1|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr9_+_45430293_45430379	6.72815	Sox2	ENSMUST00000034592.8|Dscaml1|ENSMUSG00000032087.9|Down syndrome cell adhesion molecule like 1
mm10_v2_chr11_-_46312220_46312358	6.72269	Sox2	ENSMUST00000129474.1|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000093166.4|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000165599.2|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2
mm10_v2_chr3_+_13946368_13946379	6.72095	Sox2	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chrX_+_159708593_159708612	6.6925	Sox2	ENSMUST00000080394.6|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr16_+_78301458_78301496	6.68422	Sox2	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr12_+_108605757_108605814	6.67234	Sox2	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr8_-_36249292_36249516	6.67015	Sox2	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr10_+_107271827_107271850	6.66278	Sox2	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr19_-_5729618_5729700	6.65883	Sox2	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chr8_-_84800024_84800283	6.64314	Sox2	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chrX_-_105929333_105929382	6.63484	Sox2	ENSMUST00000134507.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000137453.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000150914.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr1_-_33814516_33814576	6.63301	Sox2	ENSMUST00000044455.5|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451 	ENSMUST00000115167.1|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451
mm10_v2_chr7_+_141949982_141950086	6.61969	Sox2	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr15_-_102722120_102722137	6.61379	Sox2	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr7_+_29307924_29308057	6.60985	Sox2	ENSMUST00000108230.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1 	ENSMUST00000065181.5|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr6_-_86733218_86733256	6.60802	Sox2	ENSMUST00000113679.1|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chr15_-_75567176_75567259	6.60368	Sox2	ENSMUST00000156032.1|Ly6h|ENSMUSG00000022577.10|lymphocyte antigen 6 complex, locus H 	ENSMUST00000127095.1|Ly6h|ENSMUSG00000022577.10|lymphocyte antigen 6 complex, locus H
mm10_v2_chr2_-_6721606_6721629	6.55876	Sox2	ENSMUST00000150624.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000142941.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000100429.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182879.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr12_+_110601439_110601452	6.5532	Sox2	ENSMUST00000018851.7|Dync1h1|ENSMUSG00000018707.7|dynein cytoplasmic 1 heavy chain 1
mm10_v2_chr2_-_60125651_60125775	6.5492	Sox2	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr2_-_121806988_121807018	6.53492	Sox2	ENSMUST00000110592.1|Frmd5|ENSMUSG00000027238.10|FERM domain containing 5
mm10_v2_chr8_-_4259257_4259283	6.52012	Sox2	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr17_+_12119274_12119348	6.4891	Sox2	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr5_+_147957310_147957357	6.48313	Sox2	ENSMUST00000085558.4|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2 	ENSMUST00000129092.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chrX_-_165004829_165004829	6.47449	Sox2	ENSMUST00000114890.2|Gm17604|ENSMUSG00000079600.2|predicted gene, 17604
mm10_v2_chr15_-_79441999_79442065	6.45818	Sox2	ENSMUST00000117786.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon 	ENSMUST00000120859.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon
mm10_v2_chr2_+_156312299_156312426	6.44991	Sox2	ENSMUST00000037096.2|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2
mm10_v2_chr2_-_152831112_152831326	6.41624	Sox2	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr7_+_91090697_91090727	6.409	Sox2	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr17_+_31296191_31296253	6.39105	Sox2	ENSMUST00000165149.1|Slc37a1|ENSMUSG00000024036.9|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm10_v2_chr4_-_148287927_148287965	6.35358	Sox2	ENSMUST00000047720.8|Ptchd2|ENSMUSG00000041544.11|patched domain containing 2
mm10_v2_chr13_+_60602182_60602231	6.34741	Sox2	ENSMUST00000044083.7|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr14_+_31019125_31019157	6.30332	Sox2	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr10_-_32890462_32890462	6.29791	Sox2	ENSMUST00000092602.1|Nkain2|ENSMUSG00000069670.1|Na+/K+ transporting ATPase interacting 2
mm10_v2_chr7_-_83884289_83884341	6.29268	Sox2	ENSMUST00000094216.3|Mesdc1|ENSMUSG00000070462.3|mesoderm development candidate 1
mm10_v2_chr6_+_83795022_83795034	6.27025	Sox2	ENSMUST00000113851.1|Nagk|ENSMUSG00000034744.7|N-acetylglucosamine kinase
mm10_v2_chr2_-_6884975_6884996	6.26226	Sox2	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_+_3713449_3713474	6.24144	Sox2	ENSMUST00000027965.4|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr1_-_38821215_38821215	6.23395	Sox2	ENSMUST00000039612.4|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr17_-_87446854_87446935	6.22695	Sox2	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr2_-_18048784_18048822	6.22472	Sox2	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr16_+_23226014_23226077	6.21727	Sox2	ENSMUST00000178797.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr6_-_29507946_29507974	6.21591	Sox2	ENSMUST00000101614.3|Kcp|ENSMUSG00000059022.8|kielin/chordin-like protein 	ENSMUST00000078112.6|Kcp|ENSMUSG00000059022.8|kielin/chordin-like protein
mm10_v2_chr9_-_122903102_122903184	6.20304	Sox2	ENSMUST00000180877.1|A530083I20Rik|ENSMUSG00000097322.1|RIKEN cDNA A530083I20 gene 	ENSMUST00000180486.1|A530083I20Rik|ENSMUSG00000097322.1|RIKEN cDNA A530083I20 gene
mm10_v2_chr10_-_81627257_81627320	6.20071	Sox2	ENSMUST00000143424.1|Sirt6|ENSMUSG00000034748.10|sirtuin 6 	ENSMUST00000119324.1|Sirt6|ENSMUSG00000034748.10|sirtuin 6
mm10_v2_chr3_-_84040151_84040171	6.19215	Sox2	ENSMUST00000052342.7|D930015E06Rik|ENSMUSG00000033767.9|RIKEN cDNA D930015E06 gene
mm10_v2_chr12_+_76081645_76081661	6.18182	Sox2	ENSMUST00000154509.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chrX_-_104201126_104201185	6.17633	Sox2	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr13_-_97747399_97747414	6.16974	Sox2	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr2_+_32876114_32876241	6.15886	Sox2	ENSMUST00000028135.8|Fam129b|ENSMUSG00000026796.10|family with sequence similarity 129, member B
mm10_v2_chr17_+_55445375_55445389	6.1575	Sox2	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr7_+_91090728_91090751	6.14575	Sox2	ENSMUST00000074273.3|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr17_-_35701937_35701964	6.12887	Sox2	ENSMUST00000155628.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr11_+_102393403_102393496	6.12869	Sox2	ENSMUST00000107105.2|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107102.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107103.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000006750.7|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A
mm10_v2_chr14_-_54781886_54781925	6.12775	Sox2	ENSMUST00000022787.6|Slc7a8|ENSMUSG00000022180.6|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm10_v2_chr1_-_136346074_136346145	6.12652	Sox2	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr5_+_108065742_108065767	6.12319	Sox2	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr5_+_81021583_81021593	6.11191	Sox2	ENSMUST00000121707.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr19_+_5740885_5740904	6.10307	Sox2	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr17_+_55445550_55445701	6.09673	Sox2	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr1_+_191717834_191717904	6.09229	Sox2	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr9_+_3335470_3335501	6.07074	Sox2	ENSMUST00000053407.5|Alkbh8|ENSMUSG00000025899.7|alkB, alkylation repair homolog 8 (E. coli)
mm10_v2_chr13_-_34130345_34130361	6.04427	Sox2	ENSMUST00000075774.3|Tubb2b|ENSMUSG00000045136.5|tubulin, beta 2B class IIB
mm10_v2_chr2_-_168741752_168741800	6.03506	Sox2	ENSMUST00000029060.4|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr4_-_150652097_150652181	6.02713	Sox2	ENSMUST00000117997.1|Slc45a1|ENSMUSG00000039838.5|solute carrier family 45, member 1 	ENSMUST00000037827.3|Slc45a1|ENSMUSG00000039838.5|solute carrier family 45, member 1
mm10_v2_chr12_-_108835845_108835893	6.02079	Sox2	ENSMUST00000021693.3|Slc25a29|ENSMUSG00000021265.3|solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29
mm10_v2_chrX_-_105929206_105929321	6.00685	Sox2	ENSMUST00000134381.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000154866.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr3_+_109573907_109573990	5.95924	Sox2	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr11_+_120348678_120348782	5.94486	Sox2	ENSMUST00000143813.1|0610009L18Rik|ENSMUSG00000043644.4|RIKEN cDNA 0610009L18 gene
mm10_v2_chr3_-_107931817_107931885	5.9148	Sox2	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chrX_-_59567348_59567472	5.91415	Sox2	ENSMUST00000124402.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr5_-_34187670_34187749	5.91169	Sox2	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr11_+_69846665_69846681	5.90771	Sox2	ENSMUST00000019605.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr5_+_137761680_137761714	5.90579	Sox2	ENSMUST00000110983.2|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4 	ENSMUST00000031738.4|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4
mm10_v2_chr11_+_83964419_83964478	5.90227	Sox2	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chr1_-_6215292_6215292	5.89729	Sox2	ENSMUST00000097832.1|4732440D04Rik|ENSMUSG00000073741.1|RIKEN cDNA 4732440D04 gene
mm10_v2_chr3_+_88621274_88621292	5.89044	Sox2	ENSMUST00000107510.3|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr1_-_158356258_158356313	5.87905	Sox2	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr6_-_47594967_47595047	5.86914	Sox2	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chr7_+_28180226_28180266	5.83059	Sox2	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr9_+_108392820_108392843	5.81316	Sox2	ENSMUST00000035234.4|1700102P08Rik|ENSMUSG00000032611.4|RIKEN cDNA 1700102P08 gene
mm10_v2_chrX_+_38189829_38189842	5.77394	Sox2	ENSMUST00000131124.1|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33
mm10_v2_chr3_-_54915867_54915887	5.76974	Sox2	ENSMUST00000070342.3|Sertm1|ENSMUSG00000056306.5|serine rich and transmembrane domain containing 1
mm10_v2_chr2_-_84775420_84775444	5.76382	Sox2	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr2_+_157560078_157560130	5.76067	Sox2	ENSMUST00000153739.2|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173595.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000109526.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173839.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173041.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173793.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000172487.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000088484.5|Nnat|ENSMUSG00000067786.10|neuronatin
mm10_v2_chr10_+_36974558_36974579	5.75533	Sox2	ENSMUST00000105510.1|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr4_-_149307506_149307703	5.75219	Sox2	ENSMUST00000055647.8|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000030806.5|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000060537.6|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B
mm10_v2_chr4_+_108459389_108459451	5.74301	Sox2	ENSMUST00000106673.1|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11 	ENSMUST00000043368.5|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr7_+_45785331_45785390	5.67258	Sox2	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr18_+_37355271_37355271	5.66701	Sox2	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr19_+_26753588_26753603	5.66029	Sox2	ENSMUST00000177116.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr15_-_79441802_79441860	5.64878	Sox2	ENSMUST00000122044.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon 	ENSMUST00000135519.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon
mm10_v2_chr16_+_17070281_17070320	5.64631	Sox2	ENSMUST00000090199.3|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr5_-_135934590_135934613	5.64113	Sox2	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr10_-_94035789_94035817	5.64005	Sox2	ENSMUST00000123201.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein 	ENSMUST00000119818.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein
mm10_v2_chr15_-_79254737_79254764	5.63278	Sox2	ENSMUST00000039752.3|Slc16a8|ENSMUSG00000032988.3|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm10_v2_chr13_-_8858762_8858829	5.6234	Sox2	ENSMUST00000176329.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr6_+_17463749_17463809	5.62065	Sox2	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr19_+_7417586_7417650	5.61334	Sox2	ENSMUST00000159348.1|2700081O15Rik|ENSMUSG00000053080.9|RIKEN cDNA 2700081O15 gene
mm10_v2_chr11_-_115699307_115699324	5.61233	Sox2	ENSMUST00000106499.1|Grb2|ENSMUSG00000059923.7|growth factor receptor bound protein 2
mm10_v2_chrX_+_38189780_38189826	5.60241	Sox2	ENSMUST00000049740.2|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33 	ENSMUST00000115142.2|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33
mm10_v2_chrX_+_155262443_155262481	5.59836	Sox2	ENSMUST00000026324.9|Acot9|ENSMUSG00000025287.9|acyl-CoA thioesterase 9
mm10_v2_chr16_+_27388869_27388980	5.59555	Sox2	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr5_+_138116903_138117041	5.58785	Sox2	ENSMUST00000062350.8|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110961.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000080732.3|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110960.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000142185.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000136425.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110959.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21
mm10_v2_chr1_+_6730051_6730117	5.58579	Sox2	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr8_-_4217459_4217503	5.5679	Sox2	ENSMUST00000176227.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr17_+_72918298_72918316	5.5379	Sox2	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr5_-_73256555_73256636	5.5284	Sox2	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr5_+_66676098_66676257	5.52667	Sox2	ENSMUST00000031131.9|Uchl1|ENSMUSG00000029223.9|ubiquitin carboxy-terminal hydrolase L1
mm10_v2_chr19_-_56822161_56822220	5.5215	Sox2	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr11_-_78165521_78165589	5.51973	Sox2	ENSMUST00000017530.3|Traf4|ENSMUSG00000017386.4|TNF receptor associated factor 4
mm10_v2_chr15_-_98918131_98918231	5.51921	Sox2	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr7_+_16310412_16310455	5.51327	Sox2	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr5_-_8622855_8622952	5.50852	Sox2	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr11_+_69846610_69846659	5.47803	Sox2	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr1_-_97761538_97761609	5.47728	Sox2	ENSMUST00000171129.1|Ppip5k2|ENSMUSG00000040648.8|diphosphoinositol pentakisphosphate kinase 2
mm10_v2_chr5_-_142817654_142817668	5.4752	Sox2	ENSMUST00000151477.1|Tnrc18|ENSMUSG00000039477.10|trinucleotide repeat containing 18
mm10_v2_chr2_-_18048347_18048449	5.47155	Sox2	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr7_+_139248477_139248532	5.45009	Sox2	ENSMUST00000093993.3|Pwwp2b|ENSMUSG00000060260.6|PWWP domain containing 2B 	ENSMUST00000172136.1|Pwwp2b|ENSMUSG00000060260.6|PWWP domain containing 2B
mm10_v2_chr2_-_165884636_165884874	5.43512	Sox2	ENSMUST00000177633.1|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8 	ENSMUST00000018050.7|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8 	ENSMUST00000088113.4|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8
mm10_v2_chr9_+_54863742_54863801	5.43369	Sox2	ENSMUST00000034843.7|Ireb2|ENSMUSG00000032293.7|iron responsive element binding protein 2
mm10_v2_chr4_+_62965560_62965617	5.41416	Sox2	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr2_-_39190687_39190746	5.41094	Sox2	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr6_-_121003099_121003153	5.39783	Sox2	ENSMUST00000098457.2|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENSMUST00000150503.1|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm10_v2_chr16_+_17451981_17452034	5.38353	Sox2	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr2_+_37443273_37443339	5.36755	Sox2	ENSMUST00000133434.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000061179.5|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr16_+_11405648_11405713	5.35895	Sox2	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_144175513_144175529	5.34723	Sox2	ENSMUST00000105900.1|Shank2|ENSMUSG00000037541.13|SH3/ankyrin domain gene 2
mm10_v2_chr1_+_171250416_171250433	5.33941	Sox2	ENSMUST00000111315.1|Adamts4|ENSMUSG00000006403.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 	ENSMUST00000006570.5|Adamts4|ENSMUSG00000006403.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4
mm10_v2_chr7_-_6331235_6331290	5.33598	Sox2	ENSMUST00000127658.1|Zfp583|ENSMUSG00000030443.10|zinc finger protein 583 	ENSMUST00000062765.7|Zfp583|ENSMUSG00000030443.10|zinc finger protein 583
mm10_v2_chrX_-_12128386_12128412	5.32982	Sox2	ENSMUST00000145872.1|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr10_-_89257578_89257622	5.31597	Sox2	ENSMUST00000182341.1|Ano4|ENSMUSG00000035189.10|anoctamin 4 	ENSMUST00000182613.1|Ano4|ENSMUSG00000035189.10|anoctamin 4
mm10_v2_chr19_-_7383026_7383063	5.30698	Sox2	ENSMUST00000025924.2|AI846148|ENSMUSG00000024970.4|expressed sequence AI846148
mm10_v2_chr1_-_54926311_54926402	5.30477	Sox2	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr13_-_77131276_77131329	5.30085	Sox2	ENSMUST00000159300.1|Ankrd32|ENSMUSG00000021597.10|ankyrin repeat domain 32
mm10_v2_chrX_-_104201099_104201117	5.28861	Sox2	ENSMUST00000087879.4|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr4_+_83417715_83417758	5.26072	Sox2	ENSMUST00000030206.3|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3 	ENSMUST00000071544.4|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3
mm10_v2_chr3_+_7366598_7366641	5.23452	Sox2	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr2_+_15055274_15055379	5.21787	Sox2	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr9_-_107872403_107872422	5.20294	Sox2	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr7_-_141429351_141429429	5.17359	Sox2	ENSMUST00000164387.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000137488.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000084436.3|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr16_-_34573526_34573554	5.16986	Sox2	ENSMUST00000114961.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr4_-_155863362_155863362	5.16204	Sox2	ENSMUST00000030949.3|Tas1r3|ENSMUSG00000029072.3|taste receptor, type 1, member 3
mm10_v2_chrX_-_105929397_105929408	5.15942	Sox2	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr12_+_73997749_73997817	5.12547	Sox2	ENSMUST00000110451.2|Syt16|ENSMUSG00000044912.9|synaptotagmin XVI
mm10_v2_chr3_+_103576081_103576147	5.12493	Sox2	ENSMUST00000183637.1|Syt6|ENSMUSG00000027849.12|synaptotagmin VI 	ENSMUST00000117221.2|Syt6|ENSMUSG00000027849.12|synaptotagmin VI 	ENSMUST00000118117.1|Syt6|ENSMUSG00000027849.12|synaptotagmin VI 	ENSMUST00000118563.2|Syt6|ENSMUSG00000027849.12|synaptotagmin VI
mm10_v2_chr4_-_110292719_110292732	5.11991	Sox2	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr2_+_118900377_118900397	5.10926	Sox2	ENSMUST00000151162.1|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr15_-_84557776_84557875	5.0993	Sox2	ENSMUST00000069476.4|Ldoc1l|ENSMUSG00000055745.4|leucine zipper, down-regulated in cancer 1-like
mm10_v2_chr18_-_61536522_61536558	5.09825	Sox2	ENSMUST00000171629.1|Arhgef37|ENSMUSG00000045094.7|Rho guanine nucleotide exchange factor (GEF) 37
mm10_v2_chr13_+_40886758_40886818	5.08719	Sox2	ENSMUST00000069958.7|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr7_+_130692532_130692575	5.08194	Sox2	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr7_-_143460989_143461050	5.07767	Sox2	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr13_+_13784278_13784365	5.0766	Sox2	ENSMUST00000021734.7|Gng4|ENSMUSG00000021303.7|guanine nucleotide binding protein (G protein), gamma 4
mm10_v2_chr4_-_151861698_151861761	5.06125	Sox2	ENSMUST00000049790.7|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr9_-_75409352_75409383	5.05214	Sox2	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr3_-_17786834_17786898	5.05013	Sox2	ENSMUST00000099198.2|Gm10742|ENSMUSG00000074674.2|predicted gene 10742
mm10_v2_chr12_-_69357120_69357181	5.02859	Sox2	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr14_+_80000292_80000309	5.02705	Sox2	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr4_-_126468580_126468653	5.02208	Sox2	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr19_-_10869757_10869940	4.99819	Sox2	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr5_-_8367982_8368107	4.99792	Sox2	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr6_-_86733268_86733394	4.99283	Sox2	ENSMUST00000001185.7|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chr2_-_7396192_7396241	4.99177	Sox2	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr4_+_32238950_32238964	4.98511	Sox2	ENSMUST00000037416.6|Bach2|ENSMUSG00000040270.10|BTB and CNC homology 2
mm10_v2_chr9_-_108578657_108578675	4.97105	Sox2	ENSMUST00000068700.5|Wdr6|ENSMUSG00000066357.5|WD repeat domain 6
mm10_v2_chr2_+_3713478_3713500	4.96888	Sox2	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr7_-_127875633_127875673	4.9688	Sox2	ENSMUST00000106261.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668 	ENSMUST00000144721.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668
mm10_v2_chr15_-_91049823_91049948	4.95979	Sox2	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr2_-_165898951_165899016	4.9594	Sox2	ENSMUST00000136842.1|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8
mm10_v2_chr5_+_30853796_30853801	4.95643	Sox2	ENSMUST00000126284.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr4_+_150281573_150281646	4.94594	Sox2	ENSMUST00000105682.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr5_+_104775911_104775911	4.94565	Sox2	ENSMUST00000055593.7|Gm8258|ENSMUSG00000048334.7|predicted gene 8258
mm10_v2_chr3_+_103914560_103914605	4.94328	Sox2	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr10_+_36974536_36974556	4.9302	Sox2	ENSMUST00000019911.7|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr10_+_80151154_80151375	4.92192	Sox2	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr12_+_40446050_40446099	4.92081	Sox2	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr2_-_25983236_25983290	4.91692	Sox2	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr4_-_151861762_151861876	4.91382	Sox2	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr2_-_140671440_140671458	4.89863	Sox2	ENSMUST00000099301.1|Flrt3|ENSMUSG00000079021.1|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr12_+_75818294_75818356	4.89618	Sox2	ENSMUST00000143031.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000044217.9|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000150317.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr2_+_26315513_26315602	4.89343	Sox2	ENSMUST00000066936.2|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans) 	ENSMUST00000078616.5|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm10_v2_chr13_+_4191163_4191200	4.87849	Sox2	ENSMUST00000021634.2|Akr1c13|ENSMUSG00000021213.5|aldo-keto reductase family 1, member C13
mm10_v2_chr6_+_83794974_83794985	4.87263	Sox2	ENSMUST00000037376.7|Nagk|ENSMUSG00000034744.7|N-acetylglucosamine kinase
mm10_v2_chr3_+_20057802_20057857	4.86548	Sox2	ENSMUST00000002502.5|Hltf|ENSMUSG00000002428.6|helicase-like transcription factor
mm10_v2_chr17_-_46487641_46487682	4.85048	Sox2	ENSMUST00000047034.8|Ttbk1|ENSMUSG00000015599.8|tau tubulin kinase 1
mm10_v2_chr2_+_28513243_28513326	4.84844	Sox2	ENSMUST00000028170.8|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr11_+_93886157_93886219	4.84357	Sox2	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr3_-_127225847_127225915	4.84221	Sox2	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr2_+_84734050_84734107	4.83242	Sox2	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr5_+_108065696_108065738	4.79376	Sox2	ENSMUST00000172045.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr8_+_109705549_109705636	4.78395	Sox2	ENSMUST00000034163.8|Zfp821|ENSMUSG00000031728.9|zinc finger protein 821
mm10_v2_chr13_+_9276477_9276620	4.77533	Sox2	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chrX_+_143518671_143518703	4.764	Sox2	ENSMUST00000134402.1|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr1_-_93101854_93101879	4.76377	Sox2	ENSMUST00000171796.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A 	ENSMUST00000171556.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr1_+_42952872_42952983	4.74714	Sox2	ENSMUST00000179766.1|Gpr45|ENSMUSG00000041907.8|G protein-coupled receptor 45
mm10_v2_chr4_+_135855707_135855747	4.73643	Sox2	ENSMUST00000105853.3|Srsf10|ENSMUSG00000028676.11|serine/arginine-rich splicing factor 10 	ENSMUST00000097844.2|Srsf10|ENSMUSG00000028676.11|serine/arginine-rich splicing factor 10 	ENSMUST00000102544.2|Srsf10|ENSMUSG00000028676.11|serine/arginine-rich splicing factor 10 	ENSMUST00000126641.1|Srsf10|ENSMUSG00000028676.11|serine/arginine-rich splicing factor 10
mm10_v2_chr14_-_79771305_79771318	4.73531	Sox2	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr14_+_26638074_26638151	4.73206	Sox2	ENSMUST00000022429.2|Arf4|ENSMUSG00000021877.5|ADP-ribosylation factor 4
mm10_v2_chr15_+_76246747_76246807	4.72573	Sox2	ENSMUST00000023225.6|Grina|ENSMUSG00000022564.6|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm10_v2_chr1_+_182409162_182409184	4.72053	Sox2	ENSMUST00000117245.1|Trp53bp2|ENSMUSG00000026510.9|transformation related protein 53 binding protein 2
mm10_v2_chr6_+_115675983_115676004	4.71374	Sox2	ENSMUST00000068960.9|D830050J10Rik|ENSMUSG00000055396.9|RIKEN cDNA D830050J10 gene
mm10_v2_chr4_+_43641262_43641284	4.71132	Sox2	ENSMUST00000123351.1|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2 	ENSMUST00000128549.1|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chr6_+_48613180_48613180	4.70324	Sox2	ENSMUST00000061720.4|Zfp775|ENSMUSG00000007216.4|zinc finger protein 775
mm10_v2_chr2_-_37443096_37443178	4.69602	Sox2	ENSMUST00000102789.2|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000067043.4|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000112932.1|Zbtb6|ENSMUSG00000066798.3|zinc finger and BTB domain containing 6
mm10_v2_chr2_+_156721069_156721084	4.68951	Sox2	ENSMUST00000000094.7|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr18_+_35965036_35965087	4.67312	Sox2	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr17_-_35697971_35698001	4.67185	Sox2	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr3_-_69127098_69127113	4.66471	Sox2	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr13_-_22035589_22035643	4.63639	Sox2	ENSMUST00000091742.4|Hist1h2ah|ENSMUSG00000069302.4|histone cluster 1, H2ah
mm10_v2_chr6_+_47835650_47835725	4.613	Sox2	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr11_-_76571527_76571558	4.58644	Sox2	ENSMUST00000072740.6|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr6_+_83795205_83795238	4.58256	Sox2	ENSMUST00000113850.1|Nagk|ENSMUSG00000034744.7|N-acetylglucosamine kinase
mm10_v2_chr7_-_45814277_45814300	4.56549	Sox2	ENSMUST00000107728.1|Cyth2|ENSMUSG00000003269.8|cytohesin 2
mm10_v2_chr2_-_79908428_79908438	4.56359	Sox2	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr7_-_45814302_45814321	4.56025	Sox2	ENSMUST00000107729.1|Cyth2|ENSMUSG00000003269.8|cytohesin 2 	ENSMUST00000056820.6|Cyth2|ENSMUSG00000003269.8|cytohesin 2
mm10_v2_chr7_-_141429433_141429491	4.55806	Sox2	ENSMUST00000124444.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr4_-_116405986_116406120	4.54559	Sox2	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr10_+_89873497_89873672	4.54432	Sox2	ENSMUST00000183156.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182936.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099368.4|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr13_+_65278810_65278838	4.53863	Sox2	ENSMUST00000126879.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369 	ENSMUST00000130799.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr16_-_96082513_96082573	4.53546	Sox2	ENSMUST00000113827.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr11_-_106579111_106579141	4.5331	Sox2	ENSMUST00000103070.2|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr1_+_81077274_81077327	4.50142	Sox2	ENSMUST00000068275.5|Nyap2|ENSMUSG00000054976.8|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 	ENSMUST00000113494.2|Nyap2|ENSMUSG00000054976.8|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm10_v2_chr2_-_140671400_140671427	4.48346	Sox2	ENSMUST00000056760.3|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr6_+_77242715_77242729	4.47408	Sox2	ENSMUST00000161677.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr10_-_94035705_94035769	4.46779	Sox2	ENSMUST00000118077.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein 	ENSMUST00000118205.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein 	ENSMUST00000047711.6|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein
mm10_v2_chr2_+_32629467_32629514	4.44411	Sox2	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr3_-_146781351_146781431	4.44117	Sox2	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr5_+_117976761_117976803	4.43495	Sox2	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr18_-_23981555_23981555	4.41021	Sox2	ENSMUST00000115829.1|Zscan30|ENSMUSG00000024274.8|zinc finger and SCAN domain containing 30
mm10_v2_chr1_-_36558349_36558366	4.40665	Sox2	ENSMUST00000114991.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000114992.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr4_+_107802277_107802413	4.40634	Sox2	ENSMUST00000106733.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000030356.3|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000106732.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000126573.1|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr11_-_69560186_69560213	4.39017	Sox2	ENSMUST00000004036.5|Efnb3|ENSMUSG00000003934.5|ephrin B3
mm10_v2_chr2_-_131352857_131352889	4.38103	Sox2	ENSMUST00000059372.4|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr2_+_156721037_156721062	4.36554	Sox2	ENSMUST00000109566.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000146412.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000177013.1|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000171030.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr2_-_140671462_140671476	4.35861	Sox2	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr6_+_54039935_54040039	4.34321	Sox2	ENSMUST00000114403.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr13_+_93304799_93304935	4.32895	Sox2	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr18_+_23753708_23753725	4.32162	Sox2	ENSMUST00000115830.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr2_+_181767283_181767322	4.32047	Sox2	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr6_+_77242644_77242697	4.31153	Sox2	ENSMUST00000159616.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr5_-_142817387_142817420	4.29213	Sox2	ENSMUST00000036253.6|Tnrc18|ENSMUSG00000039477.10|trinucleotide repeat containing 18
mm10_v2_chr3_-_108210438_108210502	4.2905	Sox2	ENSMUST00000117784.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000119650.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000117409.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2
mm10_v2_chr16_-_85901118_85901133	4.28085	Sox2	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chr7_+_46397648_46397783	4.27911	Sox2	ENSMUST00000160433.1|Kcnc1|ENSMUSG00000058975.6|potassium voltage gated channel, Shaw-related subfamily, member 1
mm10_v2_chr15_-_96642883_96642984	4.26804	Sox2	ENSMUST00000088452.4|Slc38a1|ENSMUSG00000023169.8|solute carrier family 38, member 1
mm10_v2_chr10_+_40349265_40349387	4.26524	Sox2	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr7_-_121035096_121035096	4.26449	Sox2	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr7_-_13009795_13009856	4.25923	Sox2	ENSMUST00000051390.7|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45 	ENSMUST00000172240.1|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45
mm10_v2_chr17_+_8340399_8340406	4.24336	Sox2	ENSMUST00000069742.6|Prr18|ENSMUSG00000055945.7|proline rich region 18
mm10_v2_chr9_-_72111755_72111821	4.23974	Sox2	ENSMUST00000183492.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184523.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000034755.6|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr5_+_142960343_142960363	4.23847	Sox2	ENSMUST00000031565.8|Fscn1|ENSMUSG00000029581.8|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm10_v2_chr2_+_30807826_30807999	4.21823	Sox2	ENSMUST00000041830.3|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1 	ENSMUST00000152374.1|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm10_v2_chr2_-_116067391_116067444	4.21683	Sox2	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr8_-_4216912_4217003	4.20975	Sox2	ENSMUST00000177491.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr11_+_95009852_95009890	4.2024	Sox2	ENSMUST00000055947.3|Samd14|ENSMUSG00000047181.6|sterile alpha motif domain containing 14
mm10_v2_chr17_-_26069409_26069550	4.19984	Sox2	ENSMUST00000120691.1|Rab11fip3|ENSMUSG00000037098.11|RAB11 family interacting protein 3 (class II)
mm10_v2_chr6_-_120493807_120493913	4.1949	Sox2	ENSMUST00000178687.1|Cecr6|ENSMUSG00000094626.1|cat eye syndrome chromosome region, candidate 6
mm10_v2_chr5_-_38684743_38684826	4.18996	Sox2	ENSMUST00000057258.4|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000178760.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000179555.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000180214.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B
mm10_v2_chrX_+_166238923_166239024	4.17393	Sox2	ENSMUST00000060210.7|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112233.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr5_-_123684289_123684379	4.17187	Sox2	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr4_+_134468320_134468409	4.15775	Sox2	ENSMUST00000030636.4|Stmn1|ENSMUSG00000028832.5|stathmin 1 	ENSMUST00000127279.1|Stmn1|ENSMUSG00000028832.5|stathmin 1 	ENSMUST00000105867.1|Stmn1|ENSMUSG00000028832.5|stathmin 1
mm10_v2_chr4_-_44167988_44168008	4.15754	Sox2	ENSMUST00000143337.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr10_-_33624587_33624769	4.15237	Sox2	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr5_-_111761697_111761727	4.14361	Sox2	ENSMUST00000129146.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000137398.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000129065.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene
mm10_v2_chr11_-_51606840_51606857	4.13863	Sox2	ENSMUST00000074669.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000101249.2|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000109103.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B
mm10_v2_chr1_+_7088917_7088993	4.13167	Sox2	ENSMUST00000061280.10|Pcmtd1|ENSMUSG00000051285.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 	ENSMUST00000182114.1|Pcmtd1|ENSMUSG00000051285.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm10_v2_chr4_+_130792513_130792667	4.12939	Sox2	ENSMUST00000070478.3|Sdc3|ENSMUSG00000025743.8|syndecan 3
mm10_v2_chr3_+_96830069_96830115	4.11365	Sox2	ENSMUST00000058865.7|Pdzk1|ENSMUSG00000038298.8|PDZ domain containing 1
mm10_v2_chr4_-_129227883_129227923	4.11328	Sox2	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr11_+_3649494_3649494	4.10872	Sox2	ENSMUST00000093389.2|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr9_+_21616230_21616281	4.0907	Sox2	ENSMUST00000174008.1|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm10_v2_chr3_-_86999284_86999441	4.08692	Sox2	ENSMUST00000063869.5|Cd1d1|ENSMUSG00000028076.6|CD1d1 antigen 	ENSMUST00000029717.2|Cd1d1|ENSMUSG00000028076.6|CD1d1 antigen
mm10_v2_chr7_+_12881165_12881204	4.07812	Sox2	ENSMUST00000144578.1|Zfp128|ENSMUSG00000060397.6|zinc finger protein 128
mm10_v2_chr13_+_93304940_93305278	4.06849	Sox2	ENSMUST00000109497.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109498.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000060490.4|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109492.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109496.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109495.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr11_-_62789445_62789478	4.0629	Sox2	ENSMUST00000054654.6|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr2_-_7395879_7395912	4.04613	Sox2	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_+_181767040_181767073	4.04301	Sox2	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr5_-_24447587_24447854	4.03484	Sox2	ENSMUST00000127194.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000115033.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000123167.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000030799.8|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1
mm10_v2_chr7_+_28180272_28180316	4.02576	Sox2	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr18_+_52767994_52768149	4.02472	Sox2	ENSMUST00000025413.7|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000163742.2|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000178011.1|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin)
mm10_v2_chr10_-_30655859_30655868	4.02184	Sox2	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr18_+_35965088_35965110	4.01047	Sox2	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr8_-_40634776_40634806	3.99242	Sox2	ENSMUST00000048898.10|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7 	ENSMUST00000174205.1|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7
mm10_v2_chr17_+_84956718_84956745	3.99171	Sox2	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr3_-_89338005_89338066	3.9906	Sox2	ENSMUST00000029674.7|Efna4|ENSMUSG00000028040.7|ephrin A4
mm10_v2_chr2_+_128967383_128967443	3.99015	Sox2	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr17_-_87282793_87282821	3.988	Sox2	ENSMUST00000146560.2|4833418N02Rik|ENSMUSG00000085287.2|RIKEN cDNA 4833418N02 gene
mm10_v2_chr9_-_112187766_112187862	3.98114	Sox2	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr2_-_73775341_73775378	3.97974	Sox2	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr1_+_6730135_6730176	3.97882	Sox2	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr2_-_6722187_6722236	3.96334	Sox2	ENSMUST00000182657.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr11_-_68957445_68957485	3.95159	Sox2	ENSMUST00000108671.1|Arhgef15|ENSMUSG00000052921.7|Rho guanine nucleotide exchange factor (GEF) 15
mm10_v2_chr16_+_94370618_94370784	3.949	Sox2	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chrX_-_12128350_12128367	3.91077	Sox2	ENSMUST00000123004.1|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr2_-_7395968_7396011	3.90976	Sox2	ENSMUST00000002176.6|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr11_+_115765420_115765466	3.90447	Sox2	ENSMUST00000093912.4|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000136720.1|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000103034.3|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000141871.1|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene
mm10_v2_chr4_+_86930691_86930713	3.9026	Sox2	ENSMUST00000164590.1|Acer2|ENSMUSG00000091609.1|alkaline ceramidase 2
mm10_v2_chr14_+_3412614_3412614	3.89935	Sox2	ENSMUST00000170123.1|Gm10409|ENSMUSG00000096488.1|predicted gene 10409
mm10_v2_chr9_-_107710475_107710475	3.88867	Sox2	ENSMUST00000080560.3|Sema3f|ENSMUSG00000034684.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm10_v2_chr14_-_55092277_55092324	3.88378	Sox2	ENSMUST00000036328.8|Zfhx2|ENSMUSG00000040721.8|zinc finger homeobox 2
mm10_v2_chr2_-_132578244_132578255	3.88043	Sox2	ENSMUST00000110142.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr1_-_36558214_36558266	3.86311	Sox2	ENSMUST00000154493.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr6_+_17463927_17464071	3.85137	Sox2	ENSMUST00000115442.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr18_+_80046854_80046904	3.84617	Sox2	ENSMUST00000070219.7|Pard6g|ENSMUSG00000056214.8|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm10_v2_chr8_+_94977101_94977123	3.82828	Sox2	ENSMUST00000179619.1|Gpr56|ENSMUSG00000031785.9|G protein-coupled receptor 56
mm10_v2_chr5_-_114380505_114380520	3.82644	Sox2	ENSMUST00000102581.4|Kctd10|ENSMUSG00000001098.9|potassium channel tetramerisation domain containing 10
mm10_v2_chr7_-_122021143_122021222	3.81307	Sox2	ENSMUST00000033160.8|Gga2|ENSMUSG00000030872.8|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm10_v2_chr2_+_160645881_160645896	3.81068	Sox2	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr7_+_6172482_6172531	3.80753	Sox2	ENSMUST00000108567.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000054680.5|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000108566.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444
mm10_v2_chr11_-_70220794_70220832	3.80652	Sox2	ENSMUST00000159867.1|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr5_-_110387090_110387154	3.79787	Sox2	ENSMUST00000056124.6|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr6_-_29212240_29212297	3.79786	Sox2	ENSMUST00000160878.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000078155.5|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr5_-_114380459_114380487	3.78027	Sox2	ENSMUST00000001125.5|Kctd10|ENSMUSG00000001098.9|potassium channel tetramerisation domain containing 10
mm10_v2_chr4_+_152186054_152186134	3.77612	Sox2	ENSMUST00000167926.1|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr6_-_67037399_67037417	3.76979	Sox2	ENSMUST00000043098.6|Gadd45a|ENSMUSG00000036390.6|growth arrest and DNA-damage-inducible 45 alpha
mm10_v2_chr11_+_62551167_62551191	3.76923	Sox2	ENSMUST00000019649.3|Ubb|ENSMUSG00000019505.7|ubiquitin B
mm10_v2_chr2_-_27426992_27427061	3.76817	Sox2	ENSMUST00000056176.7|Vav2|ENSMUSG00000009621.12|vav 2 oncogene
mm10_v2_chr10_-_57532416_57532487	3.75697	Sox2	ENSMUST00000169122.1|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr10_-_22731336_22731447	3.73765	Sox2	ENSMUST00000127698.1|Tbpl1|ENSMUSG00000071359.7|TATA box binding protein-like 1
mm10_v2_chr1_-_93101825_93101849	3.72766	Sox2	ENSMUST00000112958.2|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr11_-_50916136_50916179	3.71496	Sox2	ENSMUST00000116378.1|Zfp2|ENSMUSG00000049321.11|zinc finger protein 2 	ENSMUST00000109128.1|Zfp2|ENSMUSG00000049321.11|zinc finger protein 2
mm10_v2_chr6_+_47244359_47244417	3.7138	Sox2	ENSMUST00000060839.6|Cntnap2|ENSMUSG00000039419.10|contactin associated protein-like 2
mm10_v2_chr9_+_21616166_21616177	3.71291	Sox2	ENSMUST00000034707.8|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 	ENSMUST00000098948.3|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm10_v2_chr2_-_132578155_132578233	3.71259	Sox2	ENSMUST00000110136.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000124107.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000060955.5|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr1_-_182019927_182019989	3.70866	Sox2	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chr2_+_156721340_156721492	3.70037	Sox2	ENSMUST00000099145.5|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr10_-_63244135_63244170	3.6988	Sox2	ENSMUST00000054837.3|1700120B22Rik|ENSMUSG00000045391.3|RIKEN cDNA 1700120B22 gene
mm10_v2_chr11_-_115699461_115699534	3.68525	Sox2	ENSMUST00000106497.1|Grb2|ENSMUSG00000059923.7|growth factor receptor bound protein 2
mm10_v2_chr7_+_16875302_16875392	3.68493	Sox2	ENSMUST00000108493.1|Dact3|ENSMUSG00000078794.3|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm10_v2_chr9_-_107872821_107872844	3.68008	Sox2	ENSMUST00000183032.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr14_-_26638183_26638183	3.67199	Sox2	ENSMUST00000166902.1|4930570N19Rik|ENSMUSG00000090861.1|RIKEN cDNA 4930570N19 gene
mm10_v2_chr7_+_28179469_28179535	3.6627	Sox2	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr8_-_40634750_40634775	3.64727	Sox2	ENSMUST00000173957.1|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7
mm10_v2_chrX_-_136868537_136868755	3.63456	Sox2	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr17_+_21733704_21733724	3.62747	Sox2	ENSMUST00000183192.1|Zfp229|ENSMUSG00000061544.7|zinc finger protein 229 	ENSMUST00000065871.7|Zfp229|ENSMUSG00000061544.7|zinc finger protein 229
mm10_v2_chr9_+_110052016_110052111	3.60997	Sox2	ENSMUST00000164930.1|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000163979.1|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr2_-_57114970_57115038	3.60539	Sox2	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr1_-_16520067_16520095	3.60218	Sox2	ENSMUST00000131257.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000153966.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr2_+_25403128_25403200	3.60166	Sox2	ENSMUST00000154809.1|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1 	ENSMUST00000055921.7|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1 	ENSMUST00000141567.1|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1
mm10_v2_chr3_-_127225917_127225959	3.59806	Sox2	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr5_-_142906702_142906754	3.59387	Sox2	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr6_-_39419757_39419817	3.59208	Sox2	ENSMUST00000146785.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1 	ENSMUST00000114823.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1
mm10_v2_chr2_-_165034770_165034820	3.58832	Sox2	ENSMUST00000122070.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5 	ENSMUST00000121377.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5
mm10_v2_chr7_+_105375053_105375098	3.58628	Sox2	ENSMUST00000106805.2|Gm5901|ENSMUSG00000078611.2|predicted gene 5901
mm10_v2_chr7_-_127393604_127393663	3.58502	Sox2	ENSMUST00000165495.1|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene 	ENSMUST00000106303.2|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene 	ENSMUST00000074249.6|E430018J23Rik|ENSMUSG00000078580.3|RIKEN cDNA E430018J23 gene
mm10_v2_chr4_-_136602641_136602760	3.58239	Sox2	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr2_+_126552407_126552407	3.58039	Sox2	ENSMUST00000061491.7|Slc27a2|ENSMUSG00000027359.10|solute carrier family 27 (fatty acid transporter), member 2
mm10_v2_chr9_+_102720287_102720336	3.5776	Sox2	ENSMUST00000130602.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr2_+_147012996_147013083	3.57565	Sox2	ENSMUST00000028921.5|Xrn2|ENSMUSG00000027433.5|5'-3' exoribonuclease 2
mm10_v2_chr8_+_106415319_106415396	3.55064	Sox2	ENSMUST00000034382.7|Zfp90|ENSMUSG00000031907.8|zinc finger protein 90
mm10_v2_chr4_-_151861667_151861679	3.53641	Sox2	ENSMUST00000169423.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr4_+_152186179_152186206	3.52907	Sox2	ENSMUST00000030779.3|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr10_+_75060885_75060901	3.52507	Sox2	ENSMUST00000164107.1|Bcr|ENSMUSG00000009681.9|breakpoint cluster region
mm10_v2_chr4_+_136284658_136284686	3.52303	Sox2	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr7_+_16309577_16309641	3.51631	Sox2	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr13_-_54687644_54687688	3.51134	Sox2	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr2_-_165034821_165034867	3.50848	Sox2	ENSMUST00000153905.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5 	ENSMUST00000040381.8|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5
mm10_v2_chr17_-_87282771_87282786	3.48617	Sox2	ENSMUST00000161759.1|4833418N02Rik|ENSMUSG00000085287.2|RIKEN cDNA 4833418N02 gene
mm10_v2_chr8_+_61224162_61224174	3.47744	Sox2	ENSMUST00000034060.5|Sh3rf1|ENSMUSG00000031642.8|SH3 domain containing ring finger 1
mm10_v2_chr10_+_57486354_57486414	3.47013	Sox2	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr1_+_81077204_81077252	3.46531	Sox2	ENSMUST00000123720.1|Nyap2|ENSMUSG00000054976.8|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm10_v2_chr19_-_4334001_4334031	3.45802	Sox2	ENSMUST00000176653.1|Kdm2a|ENSMUSG00000054611.10|lysine (K)-specific demethylase 2A
mm10_v2_chr7_-_73537621_73537766	3.44508	Sox2	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr9_-_107872687_107872747	3.44348	Sox2	ENSMUST00000035201.6|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr13_-_95618442_95618475	3.43906	Sox2	ENSMUST00000059193.5|F2r|ENSMUSG00000048376.5|coagulation factor II (thrombin) receptor
mm10_v2_chr4_-_12087912_12088011	3.43656	Sox2	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr9_+_119402444_119402501	3.43644	Sox2	ENSMUST00000035093.8|Acvr2b|ENSMUSG00000061393.7|activin receptor IIB 	ENSMUST00000165044.1|Acvr2b|ENSMUSG00000061393.7|activin receptor IIB
mm10_v2_chr15_-_96699698_96699717	3.43232	Sox2	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr4_-_152318458_152318654	3.42676	Sox2	ENSMUST00000170820.1|Rnf207|ENSMUSG00000058498.6|ring finger protein 207 	ENSMUST00000076183.5|Rnf207|ENSMUSG00000058498.6|ring finger protein 207
mm10_v2_chr5_-_106696530_106696650	3.42354	Sox2	ENSMUST00000137285.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000124263.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112695.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000155495.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000135108.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr15_-_98871175_98871204	3.41412	Sox2	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr7_+_27195781_27195885	3.41375	Sox2	ENSMUST00000108379.1|BC024978|ENSMUSG00000078786.3|cDNA sequence BC024978 	ENSMUST00000179391.1|BC024978|ENSMUSG00000078786.3|cDNA sequence BC024978
mm10_v2_chr16_-_23225334_23225368	3.39924	Sox2	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr4_-_129742275_129742312	3.39252	Sox2	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr6_-_134566913_134566995	3.38001	Sox2	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr14_-_62456286_62456289	3.37972	Sox2	ENSMUST00000165651.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2 	ENSMUST00000022501.3|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr7_+_24507099_24507110	3.37243	Sox2	ENSMUST00000177228.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr18_+_37755718_37755773	3.36891	Sox2	ENSMUST00000061279.7|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr2_-_52676571_52676588	3.35057	Sox2	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chrX_+_13071470_13071499	3.33091	Sox2	ENSMUST00000169594.2|Usp9x|ENSMUSG00000031010.11|ubiquitin specific peptidase 9, X chromosome
mm10_v2_chr16_-_97851796_97851853	3.32851	Sox2	ENSMUST00000121584.1|Prdm15|ENSMUSG00000014039.11|PR domain containing 15
mm10_v2_chr4_-_41723129_41723179	3.32751	Sox2	ENSMUST00000171641.1|Dctn3|ENSMUSG00000028447.5|dynactin 3 	ENSMUST00000030158.4|Dctn3|ENSMUSG00000028447.5|dynactin 3
mm10_v2_chr12_-_84946921_84946923	3.32286	Sox2	ENSMUST00000169161.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1
mm10_v2_chr18_-_6516089_6516108	3.31714	Sox2	ENSMUST00000115870.2|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr15_-_95528228_95528266	3.3149	Sox2	ENSMUST00000075275.2|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr4_-_99120898_99120935	3.30636	Sox2	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr9_+_59578192_59578337	3.30078	Sox2	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr11_-_70220776_70220790	3.30025	Sox2	ENSMUST00000141290.1|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chrX_+_166238901_166238914	3.29769	Sox2	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr7_+_30095150_30095192	3.27816	Sox2	ENSMUST00000130526.1|Zfp260|ENSMUSG00000049421.7|zinc finger protein 260 	ENSMUST00000108200.1|Zfp260|ENSMUSG00000049421.7|zinc finger protein 260
mm10_v2_chr3_+_53463666_53463681	3.27427	Sox2	ENSMUST00000058577.4|Proser1|ENSMUSG00000049504.11|proline and serine rich 1
mm10_v2_chr17_+_35059035_35059130	3.27236	Sox2	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr2_+_181187247_181187347	3.25794	Sox2	ENSMUST00000016488.6|Ppdpf|ENSMUSG00000016344.8|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene 	ENSMUST00000108841.1|Ppdpf|ENSMUSG00000016344.8|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm10_v2_chr11_+_97415527_97415538	3.24219	Sox2	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr6_-_136171722_136171849	3.23188	Sox2	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr2_+_27009936_27010082	3.23119	Sox2	ENSMUST00000133807.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1
mm10_v2_chr13_+_65278839_65278903	3.23046	Sox2	ENSMUST00000155732.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr5_-_102069905_102069940	3.21932	Sox2	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr7_-_111779963_111779993	3.21757	Sox2	ENSMUST00000049430.8|Galnt18|ENSMUSG00000038296.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18 	ENSMUST00000106663.1|Galnt18|ENSMUSG00000038296.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18
mm10_v2_chr11_-_62731865_62731910	3.21669	Sox2	ENSMUST00000150336.1|Zfp287|ENSMUSG00000005267.7|zinc finger protein 287
mm10_v2_chr7_+_24481991_24482076	3.20523	Sox2	ENSMUST00000068023.7|Cadm4|ENSMUSG00000054793.7|cell adhesion molecule 4
mm10_v2_chr18_-_43687695_43687773	3.20319	Sox2	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr18_+_75005839_75005945	3.20248	Sox2	ENSMUST00000040284.4|BC031181|ENSMUSG00000036299.4|cDNA sequence BC031181
mm10_v2_chr10_-_57532489_57532530	3.19678	Sox2	ENSMUST00000020027.4|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr5_-_142550965_142551110	3.19669	Sox2	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr4_+_136284708_136284775	3.1895	Sox2	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr2_-_45110241_45110265	3.1889	Sox2	ENSMUST00000177302.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr18_+_68300351_68300422	3.18055	Sox2	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chrX_-_53370470_53370502	3.17368	Sox2	ENSMUST00000096447.2|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1 	ENSMUST00000023836.3|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1
mm10_v2_chr14_+_26638237_26638347	3.16366	Sox2	ENSMUST00000112318.3|Arf4|ENSMUSG00000021877.5|ADP-ribosylation factor 4
mm10_v2_chr2_+_27009926_27009935	3.163	Sox2	ENSMUST00000114005.2|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114004.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114006.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114007.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1
mm10_v2_chr7_-_43489967_43490075	3.14978	Sox2	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr11_+_59662471_59662543	3.14261	Sox2	ENSMUST00000072031.6|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000116371.1|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000108751.1|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein 	ENSMUST00000066330.8|Mprip|ENSMUSG00000005417.11|myosin phosphatase Rho interacting protein
mm10_v2_chr5_+_21646033_21646057	3.13977	Sox2	ENSMUST00000095495.2|Armc10|ENSMUSG00000038525.10|armadillo repeat containing 10
mm10_v2_chr3_+_27317028_27317084	3.13911	Sox2	ENSMUST00000046383.5|Tnfsf10|ENSMUSG00000039304.5|tumor necrosis factor (ligand) superfamily, member 10 	ENSMUST00000174840.1|Tnfsf10|ENSMUSG00000039304.5|tumor necrosis factor (ligand) superfamily, member 10
mm10_v2_chr14_+_3332627_3332627	3.13643	Sox2	ENSMUST00000177786.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr14_+_21499770_21499883	3.13383	Sox2	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr14_-_56571830_56571860	3.1274	Sox2	ENSMUST00000065302.7|Cenpj|ENSMUSG00000064128.6|centromere protein J
mm10_v2_chr7_-_27195727_27195768	3.12452	Sox2	ENSMUST00000163311.2|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A 	ENSMUST00000126211.1|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A
mm10_v2_chr19_+_28990476_28990497	3.12402	Sox2	ENSMUST00000050148.3|Cdc37l1|ENSMUSG00000024780.6|cell division cycle 37-like 1
mm10_v2_chr13_+_16014457_16014475	3.12067	Sox2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr3_-_85741389_85741389	3.11034	Sox2	ENSMUST00000094148.4|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr9_-_59486610_59486621	3.10491	Sox2	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr5_-_148928619_148928659	3.10426	Sox2	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr16_-_20426375_20426394	3.10033	Sox2	ENSMUST00000079158.6|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr1_-_16520106_16520133	3.09575	Sox2	ENSMUST00000162435.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr18_-_84086379_84086404	3.08715	Sox2	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr3_-_127837419_127837505	3.08561	Sox2	ENSMUST00000051737.6|Ap1ar|ENSMUSG00000074238.2|adaptor-related protein complex 1 associated regulatory protein
mm10_v2_chr2_-_26294550_26294561	3.08546	Sox2	ENSMUST00000057224.3|4932418E24Rik|ENSMUSG00000048038.6|RIKEN cDNA 4932418E24 gene
mm10_v2_chr11_-_121229095_121229292	3.0847	Sox2	ENSMUST00000137299.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643 	ENSMUST00000169393.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643
mm10_v2_chr3_-_89365233_89365253	3.08317	Sox2	ENSMUST00000070820.6|Dcst1|ENSMUSG00000042672.9|DC-STAMP domain containing 1
mm10_v2_chr10_+_69213084_69213228	3.08079	Sox2	ENSMUST00000163497.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1 	ENSMUST00000164212.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1 	ENSMUST00000067908.7|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr9_-_105495037_105495117	3.07724	Sox2	ENSMUST00000176190.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000163879.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000112558.2|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000176390.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr10_-_92162753_92162765	3.07716	Sox2	ENSMUST00000182197.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr11_-_77489666_77489687	3.06938	Sox2	ENSMUST00000037593.7|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b 	ENSMUST00000092892.3|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b
mm10_v2_chr8_-_111910171_111910199	3.06535	Sox2	ENSMUST00000034430.4|Chst5|ENSMUSG00000031952.4|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
mm10_v2_chr14_+_25607797_25607838	3.06058	Sox2	ENSMUST00000160229.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr8_+_3493135_3493212	3.06016	Sox2	ENSMUST00000061508.7|Zfp358|ENSMUSG00000047264.7|zinc finger protein 358
mm10_v2_chrX_-_53608979_53608979	3.05911	Sox2	ENSMUST00000123034.1|Gm14597|ENSMUSG00000079593.3|predicted gene 14597
mm10_v2_chr5_-_138155694_138155744	3.05297	Sox2	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr13_-_84064772_84064808	3.05155	Sox2	ENSMUST00000182477.1|Gm17750|ENSMUSG00000098087.1|predicted gene, 17750
mm10_v2_chr8_-_109962127_109962213	3.05045	Sox2	ENSMUST00000001722.7|Marveld3|ENSMUSG00000001672.8|MARVEL (membrane-associating) domain containing 3 	ENSMUST00000051430.6|Marveld3|ENSMUSG00000001672.8|MARVEL (membrane-associating) domain containing 3
mm10_v2_chr7_+_141061274_141061311	3.04553	Sox2	ENSMUST00000048002.5|B4galnt4|ENSMUSG00000055629.4|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm10_v2_chr9_-_45906369_45906437	3.04201	Sox2	ENSMUST00000161187.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214
mm10_v2_chr2_+_30266721_30266886	3.03876	Sox2	ENSMUST00000113645.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000133877.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000139719.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000113643.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000150695.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1
mm10_v2_chr2_+_49451486_49451559	3.03721	Sox2	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr11_-_121229293_121229322	3.03663	Sox2	ENSMUST00000106115.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643 	ENSMUST00000038709.7|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643 	ENSMUST00000147490.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643
mm10_v2_chr6_+_17749170_17749265	3.03075	Sox2	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr7_+_82174796_82174825	3.03003	Sox2	ENSMUST00000032874.7|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr5_+_66968416_66968447	3.02568	Sox2	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr2_+_60209887_60210073	3.01395	Sox2	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr11_-_69822144_69822180	3.01371	Sox2	ENSMUST00000045771.6|Spem1|ENSMUSG00000041165.6|sperm maturation 1
mm10_v2_chr4_+_40723084_40723117	2.98444	Sox2	ENSMUST00000149794.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr6_-_144209448_144209469	2.97887	Sox2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_11502090_11502126	2.97154	Sox2	ENSMUST00000179584.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000170196.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000171188.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114845.3|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114844.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000100411.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr4_-_109156610_109156631	2.97132	Sox2	ENSMUST00000161363.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr12_+_44269145_44269227	2.96877	Sox2	ENSMUST00000043082.8|Pnpla8|ENSMUSG00000036257.8|patatin-like phospholipase domain containing 8
mm10_v2_chr11_+_3330781_3330812	2.95575	Sox2	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr3_-_30793549_30793595	2.94995	Sox2	ENSMUST00000180833.1|4933429H19Rik|ENSMUSG00000097786.1|RIKEN cDNA 4933429H19 gene
mm10_v2_chr4_+_6191093_6191122	2.9445	Sox2	ENSMUST00000029907.5|Ubxn2b|ENSMUSG00000028243.5|UBX domain protein 2B
mm10_v2_chr13_+_83573577_83573607	2.94358	Sox2	ENSMUST00000185052.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr7_-_34654342_34654398	2.94123	Sox2	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr1_+_171895664_171895664	2.94028	Sox2	ENSMUST00000097466.2|Gm10521|ENSMUSG00000073492.2|predicted gene 10521
mm10_v2_chr7_-_37769624_37769677	2.93566	Sox2	ENSMUST00000175941.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr14_-_63177793_63177889	2.9301	Sox2	ENSMUST00000054963.9|Fdft1|ENSMUSG00000021273.9|farnesyl diphosphate farnesyl transferase 1
mm10_v2_chr17_-_35704574_35704632	2.91078	Sox2	ENSMUST00000117301.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1 	ENSMUST00000134995.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr6_-_144209471_144209487	2.90761	Sox2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_+_156721009_156721031	2.90734	Sox2	ENSMUST00000131157.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr4_-_129623870_129623947	2.90516	Sox2	ENSMUST00000106035.1|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B 	ENSMUST00000150357.1|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B 	ENSMUST00000030586.8|Ccdc28b|ENSMUSG00000028795.9|coiled coil domain containing 28B
mm10_v2_chr11_+_87760533_87760587	2.8968	Sox2	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr7_-_27196138_27196271	2.89594	Sox2	ENSMUST00000122202.1|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A 	ENSMUST00000080356.3|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A
mm10_v2_chr9_-_72111827_72111895	2.89518	Sox2	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr14_-_6889962_6889962	2.89462	Sox2	ENSMUST00000171906.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr7_-_78578308_78578408	2.89329	Sox2	ENSMUST00000039431.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr2_-_60881360_60881491	2.89271	Sox2	ENSMUST00000164147.1|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1 	ENSMUST00000112509.1|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr8_+_127064107_127064347	2.88553	Sox2	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr14_+_58070547_58070547	2.8842	Sox2	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr6_-_144209558_144209647	2.88182	Sox2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr4_-_44167580_44167608	2.87797	Sox2	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr11_+_97450136_97450180	2.86063	Sox2	ENSMUST00000107601.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr1_-_55027473_55027484	2.85675	Sox2	ENSMUST00000027127.7|Sf3b1|ENSMUSG00000025982.7|splicing factor 3b, subunit 1
mm10_v2_chr3_-_75956888_75956959	2.85628	Sox2	ENSMUST00000038563.7|Golim4|ENSMUSG00000034109.9|golgi integral membrane protein 4 	ENSMUST00000167078.1|Golim4|ENSMUSG00000034109.9|golgi integral membrane protein 4 	ENSMUST00000117242.1|Golim4|ENSMUSG00000034109.9|golgi integral membrane protein 4
mm10_v2_chr8_-_70120816_70120873	2.84549	Sox2	ENSMUST00000002412.8|Ncan|ENSMUSG00000002341.8|neurocan
mm10_v2_chr9_-_75409951_75410039	2.84083	Sox2	ENSMUST00000049355.10|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr4_+_154142363_154142383	2.83504	Sox2	ENSMUST00000030895.5|Wrap73|ENSMUSG00000029029.8|WD repeat containing, antisense to Trp73
mm10_v2_chr5_-_123141067_123141094	2.83344	Sox2	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr8_+_87472838_87472849	2.83237	Sox2	ENSMUST00000180806.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr1_+_42953106_42953164	2.82221	Sox2	ENSMUST00000179655.1|Gpr45|ENSMUSG00000096364.1|G protein-coupled receptor 45
mm10_v2_chr11_-_62789402_62789443	2.82001	Sox2	ENSMUST00000108705.1|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr18_+_37300799_37300835	2.81023	Sox2	ENSMUST00000051754.1|Pcdhb3|ENSMUSG00000045498.1|protocadherin beta 3
mm10_v2_chr3_+_61364507_61364633	2.80944	Sox2	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr11_-_96005872_96005952	2.80147	Sox2	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chr5_+_143548700_143548756	2.79719	Sox2	ENSMUST00000169329.1|Fam220a|ENSMUSG00000048910.9|family with sequence similarity 220, member A 	ENSMUST00000067145.5|Fam220a|ENSMUSG00000048910.9|family with sequence similarity 220, member A 	ENSMUST00000119488.1|Fam220a|ENSMUSG00000083012.2|family with sequence similarity 220, member A 	ENSMUST00000118121.1|Fam220a|ENSMUSG00000083012.2|family with sequence similarity 220, member A
mm10_v2_chr15_-_98953541_98953560	2.79562	Sox2	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chr19_-_46039621_46039662	2.78893	Sox2	ENSMUST00000056931.7|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1
mm10_v2_chr4_-_11254248_11254266	2.78883	Sox2	ENSMUST00000044616.3|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108319.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108318.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8
mm10_v2_chr6_-_99666762_99666786	2.78399	Sox2	ENSMUST00000032151.2|Eif4e3|ENSMUSG00000093661.1|eukaryotic translation initiation factor 4E member 3
mm10_v2_chrX_-_57393020_57393040	2.77658	Sox2	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr7_-_105574324_105574402	2.76455	Sox2	ENSMUST00000081165.7|Apbb1|ENSMUSG00000037032.9|amyloid beta (A4) precursor protein-binding, family B, member 1
mm10_v2_chr4_-_33248500_33248518	2.7643	Sox2	ENSMUST00000049357.9|Pnrc1|ENSMUSG00000040128.9|proline-rich nuclear receptor coactivator 1
mm10_v2_chr2_+_160731258_160731310	2.76376	Sox2	ENSMUST00000103115.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr16_-_20426322_20426372	2.76211	Sox2	ENSMUST00000115547.2|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5 	ENSMUST00000096199.4|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr16_+_43508118_43508263	2.75649	Sox2	ENSMUST00000114690.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr13_+_14063776_14063822	2.75323	Sox2	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr19_+_30030589_30030634	2.75124	Sox2	ENSMUST00000112552.1|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr13_-_56895737_56895793	2.74066	Sox2	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr7_+_82175156_82175199	2.74047	Sox2	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr9_-_75597643_75597656	2.73349	Sox2	ENSMUST00000164100.1|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr11_-_99230998_99231019	2.73343	Sox2	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr18_-_34624562_34624601	2.72699	Sox2	ENSMUST00000003876.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115766.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000097626.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115765.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8
mm10_v2_chr10_+_67096456_67096534	2.71927	Sox2	ENSMUST00000174317.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr18_+_37421418_37421455	2.71675	Sox2	ENSMUST00000053073.4|Pcdhb11|ENSMUSG00000051486.4|protocadherin beta 11
mm10_v2_chrX_-_57392962_57392988	2.71555	Sox2	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr3_+_14533867_14533889	2.71195	Sox2	ENSMUST00000163660.1|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr6_+_124916863_124916863	2.70874	Sox2	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr16_-_96082389_96082481	2.70728	Sox2	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr7_-_105787544_105787555	2.70676	Sox2	ENSMUST00000078482.5|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila) 	ENSMUST00000154659.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr9_-_59486323_59486415	2.70595	Sox2	ENSMUST00000165322.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr5_-_122988533_122988705	2.70595	Sox2	ENSMUST00000086200.4|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B 	ENSMUST00000156474.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr17_+_74338943_74338987	2.69694	Sox2	ENSMUST00000024869.6|Spast|ENSMUSG00000024068.6|spastin
mm10_v2_chr4_-_44167905_44167976	2.69137	Sox2	ENSMUST00000102934.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr16_+_18248866_18248919	2.68458	Sox2	ENSMUST00000115640.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A 	ENSMUST00000140206.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A
mm10_v2_chr15_+_100038635_100038669	2.67906	Sox2	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr8_-_11635745_11635765	2.67641	Sox2	ENSMUST00000033905.5|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10 	ENSMUST00000169782.1|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10
mm10_v2_chr14_+_5501674_5501674	2.67045	Sox2	ENSMUST00000181562.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr8_+_65967157_65967191	2.66671	Sox2	ENSMUST00000072482.6|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr15_+_100154379_100154411	2.64053	Sox2	ENSMUST00000023768.6|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila) 	ENSMUST00000108971.2|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr3_+_88142536_88142572	2.63768	Sox2	ENSMUST00000107558.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000107559.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr7_+_119900099_119900108	2.63589	Sox2	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr17_+_43016536_43016591	2.61745	Sox2	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chr11_-_116024489_116024511	2.61674	Sox2	ENSMUST00000016703.7|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr3_-_158016419_158016453	2.60839	Sox2	ENSMUST00000127778.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr9_-_105495130_105495146	2.60553	Sox2	ENSMUST00000038118.7|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr7_+_101969796_101969843	2.60321	Sox2	ENSMUST00000084852.5|Numa1|ENSMUSG00000066306.6|nuclear mitotic apparatus protein 1
mm10_v2_chr5_-_98030727_98030765	2.60301	Sox2	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr5_+_105415738_105415849	2.60252	Sox2	ENSMUST00000112707.1|Lrrc8b|ENSMUSG00000070639.4|leucine rich repeat containing 8 family, member B
mm10_v2_chr4_+_40722912_40723001	2.59811	Sox2	ENSMUST00000164233.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENSMUST00000137246.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENSMUST00000125442.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr1_-_30949756_30949770	2.59587	Sox2	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr5_+_92137896_92137939	2.59224	Sox2	ENSMUST00000031355.6|Uso1|ENSMUSG00000029407.7|USO1 vesicle docking factor
mm10_v2_chr2_+_32151074_32151262	2.58382	Sox2	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr4_-_141599835_141600032	2.58311	Sox2	ENSMUST00000141518.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000127455.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000105784.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000147785.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr14_-_66868572_66868688	2.57902	Sox2	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chrX_-_133688978_133689005	2.57085	Sox2	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr12_+_8674681_8674765	2.56943	Sox2	ENSMUST00000168361.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000169750.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000163730.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr6_+_143167210_143167267	2.56804	Sox2	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr8_+_127064022_127064086	2.56543	Sox2	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr7_-_83550258_83550258	2.5644	Sox2	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr6_-_39419967_39420074	2.55605	Sox2	ENSMUST00000122996.1|Mkrn1|ENSMUSG00000029922.9|makorin, ring finger protein, 1
mm10_v2_chr8_+_87472805_87472822	2.55208	Sox2	ENSMUST00000180700.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000182174.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000181159.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr2_-_63184253_63184292	2.54498	Sox2	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr2_-_11502067_11502080	2.54323	Sox2	ENSMUST00000028114.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000049849.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr7_-_19271797_19271823	2.54284	Sox2	ENSMUST00000032561.8|Vasp|ENSMUSG00000030403.8|vasodilator-stimulated phosphoprotein
mm10_v2_chr13_-_9765137_9765321	2.52974	Sox2	ENSMUST00000062658.8|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000130151.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110636.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000152725.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr3_+_88142328_88142483	2.52877	Sox2	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr13_-_59694100_59694108	2.52373	Sox2	ENSMUST00000061597.5|4921517D22Rik|ENSMUSG00000049902.5|RIKEN cDNA 4921517D22 gene
mm10_v2_chr10_+_74967164_74967203	2.52035	Sox2	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr3_+_90476121_90476220	2.51788	Sox2	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr2_-_132578128_132578153	2.51486	Sox2	ENSMUST00000028822.7|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr10_+_39612934_39612934	2.48103	Sox2	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr2_-_51149100_51149115	2.46548	Sox2	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr17_-_46890405_46890405	2.45903	Sox2	ENSMUST00000086675.3|A330017A19Rik|ENSMUSG00000073388.2|RIKEN cDNA A330017A19 gene
mm10_v2_chr17_-_88065028_88065028	2.44399	Sox2	ENSMUST00000130379.1|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr1_-_34843050_34843065	2.44202	Sox2	ENSMUST00000170092.1|Fam168b|ENSMUSG00000037503.6|family with sequence similarity 168, member B 	ENSMUST00000167518.1|Fam168b|ENSMUSG00000037503.6|family with sequence similarity 168, member B 	ENSMUST00000047534.5|Fam168b|ENSMUSG00000037503.6|family with sequence similarity 168, member B
mm10_v2_chr9_-_65021645_65021717	2.44198	Sox2	ENSMUST00000036615.5|Ptplad1|ENSMUSG00000033629.5|protein tyrosine phosphatase-like A domain containing 1
mm10_v2_chr3_-_95315086_95315117	2.43941	Sox2	ENSMUST00000098867.3|Gm10691|ENSMUSG00000074414.3|predicted gene 10691
mm10_v2_chr4_+_106911517_106911667	2.43689	Sox2	ENSMUST00000072753.6|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3 	ENSMUST00000097934.3|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3
mm10_v2_chr6_+_86404336_86404473	2.4341	Sox2	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr12_+_69296676_69296798	2.43363	Sox2	ENSMUST00000021362.4|Klhdc2|ENSMUSG00000020978.4|kelch domain containing 2
mm10_v2_chr3_-_89402650_89402793	2.42436	Sox2	ENSMUST00000168325.1|Lenep|ENSMUSG00000078173.2|lens epithelial protein 	ENSMUST00000057431.5|Lenep|ENSMUSG00000078173.2|lens epithelial protein
mm10_v2_chr2_-_114052804_114052887	2.41153	Sox2	ENSMUST00000090269.6|Actc1|ENSMUSG00000068614.7|actin, alpha, cardiac muscle 1
mm10_v2_chr3_-_94436574_94436616	2.40861	Sox2	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chr2_+_131491764_131491943	2.40528	Sox2	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr19_-_46395722_46395756	2.39667	Sox2	ENSMUST00000040270.4|Actr1a|ENSMUSG00000025228.4|ARP1 actin-related protein 1A, centractin alpha
mm10_v2_chr5_+_138085083_138085147	2.39419	Sox2	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr11_+_69846374_69846387	2.38702	Sox2	ENSMUST00000108632.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr9_+_55208925_55208989	2.38117	Sox2	ENSMUST00000034859.8|Fbxo22|ENSMUSG00000032309.9|F-box protein 22
mm10_v2_chr9_+_90162978_90163037	2.37245	Sox2	ENSMUST00000113060.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm10_v2_chr9_+_4383535_4383535	2.37122	Sox2	ENSMUST00000047173.9|Msantd4|ENSMUSG00000041124.10|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
mm10_v2_chrX_+_153498202_153498232	2.36056	Sox2	ENSMUST00000060714.8|Ubqln2|ENSMUSG00000050148.8|ubiquilin 2
mm10_v2_chr5_+_34949435_34949504	2.3601	Sox2	ENSMUST00000030984.7|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr7_+_97081711_97081778	2.35571	Sox2	ENSMUST00000004622.5|Gab2|ENSMUSG00000004508.5|growth factor receptor bound protein 2-associated protein 2
mm10_v2_chr1_-_54194048_54194048	2.35528	Sox2	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr10_+_39369750_39369804	2.34852	Sox2	ENSMUST00000063091.6|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000099967.3|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000126486.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr2_-_79908389_79908403	2.33593	Sox2	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr8_+_71908595_71908657	2.3245	Sox2	ENSMUST00000110002.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882 	ENSMUST00000131544.1|Zfp617|ENSMUSG00000066880.9|zinc finger protein 617 	ENSMUST00000125802.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882
mm10_v2_chr14_-_7174533_7174533	2.32024	Sox2	ENSMUST00000172431.1|Gm3512|ENSMUSG00000090363.2|predicted gene 3512
mm10_v2_chr19_+_8839298_8839346	2.31786	Sox2	ENSMUST00000160556.1|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr10_-_60831571_60831588	2.31504	Sox2	ENSMUST00000077925.5|Unc5b|ENSMUSG00000020099.7|unc-5 homolog B (C. elegans)
mm10_v2_chr15_+_86058727_86058793	2.31462	Sox2	ENSMUST00000138134.1|Gramd4|ENSMUSG00000035900.12|GRAM domain containing 4
mm10_v2_chr7_+_12834743_12834811	2.31207	Sox2	ENSMUST00000004614.8|Zfp110|ENSMUSG00000058638.7|zinc finger protein 110
mm10_v2_chr11_+_105181527_105181598	2.311	Sox2	ENSMUST00000106941.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr8_-_47713920_47713938	2.30203	Sox2	ENSMUST00000038738.5|Cdkn2aip|ENSMUSG00000038069.5|CDKN2A interacting protein
mm10_v2_chr4_-_99120856_99120894	2.29333	Sox2	ENSMUST00000030286.7|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr2_+_131491958_131491993	2.29195	Sox2	ENSMUST00000110181.1|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110180.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr14_+_3049285_3049285	2.28647	Sox2	ENSMUST00000166494.1|Gm2897|ENSMUSG00000079410.4|predicted gene 2897
mm10_v2_chr6_-_50261743_50261788	2.28298	Sox2	ENSMUST00000101405.3|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human) 	ENSMUST00000165099.1|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human) 	ENSMUST00000170142.1|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human)
mm10_v2_chr7_+_127470354_127470371	2.28265	Sox2	ENSMUST00000106292.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr3_-_50443603_50443615	2.27309	Sox2	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr5_+_66968559_66968577	2.26887	Sox2	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chrX_-_103981242_103981287	2.26687	Sox2	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr16_-_91044473_91044543	2.25995	Sox2	ENSMUST00000118522.1|Paxbp1|ENSMUSG00000022974.6|PAX3 and PAX7 binding protein 1
mm10_v2_chr9_-_44721383_44721484	2.25984	Sox2	ENSMUST00000148929.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000123406.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr6_+_125039760_125039859	2.25526	Sox2	ENSMUST00000140131.1|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4 	ENSMUST00000032480.7|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4
mm10_v2_chr12_+_8674129_8674150	2.25497	Sox2	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chrX_-_38576166_38576187	2.25188	Sox2	ENSMUST00000050083.5|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr18_-_34597468_34597468	2.24155	Sox2	ENSMUST00000056932.2|4933408B17Rik|ENSMUSG00000049357.5|RIKEN cDNA 4933408B17 gene
mm10_v2_chr1_-_58424042_58424066	2.23707	Sox2	ENSMUST00000034868.7|Clk1|ENSMUSG00000026034.11|CDC-like kinase 1
mm10_v2_chr17_-_55712571_55712630	2.22818	Sox2	ENSMUST00000086876.5|Pot1b|ENSMUSG00000024174.8|protection of telomeres 1B
mm10_v2_chr17_+_32993123_32993201	2.22683	Sox2	ENSMUST00000087666.4|Zfp952|ENSMUSG00000053390.9|zinc finger protein 952 	ENSMUST00000157017.1|Zfp952|ENSMUSG00000053390.9|zinc finger protein 952
mm10_v2_chr9_+_90163057_90163101	2.22062	Sox2	ENSMUST00000113059.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 	ENSMUST00000167122.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm10_v2_chr8_+_86745679_86745699	2.20907	Sox2	ENSMUST00000098532.2|Gm10638|ENSMUSG00000074178.2|predicted gene 10638
mm10_v2_chr12_+_8674391_8674470	2.20731	Sox2	ENSMUST00000163569.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000169089.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr1_+_82839449_82839518	2.20297	Sox2	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chr2_-_20968881_20968957	2.19407	Sox2	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr4_-_43045686_43045825	2.18734	Sox2	ENSMUST00000107956.1|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B 	ENSMUST00000107957.1|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B
mm10_v2_chr1_-_153487639_153487662	2.18465	Sox2	ENSMUST00000042141.5|Dhx9|ENSMUSG00000042699.5|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm10_v2_chr15_+_41830921_41831001	2.17433	Sox2	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr11_-_98729374_98729435	2.16656	Sox2	ENSMUST00000126565.1|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000100500.2|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000017354.6|Med24|ENSMUSG00000017210.8|mediator complex subunit 24
mm10_v2_chr7_+_24134148_24134184	2.16026	Sox2	ENSMUST00000056549.7|Zfp235|ENSMUSG00000047603.8|zinc finger protein 235
mm10_v2_chr8_-_83332416_83332494	2.15893	Sox2	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr16_-_89818338_89818356	2.14614	Sox2	ENSMUST00000164263.2|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr6_+_86628174_86628208	2.14252	Sox2	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr13_-_9764865_9764941	2.13584	Sox2	ENSMUST00000128658.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr13_-_98926374_98926389	2.1269	Sox2	ENSMUST00000109401.1|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr12_+_80790532_80790574	2.11805	Sox2	ENSMUST00000068519.5|4933426M11Rik|ENSMUSG00000021133.8|RIKEN cDNA 4933426M11 gene
mm10_v2_chr6_-_49264014_49264060	2.11737	Sox2	ENSMUST00000031841.7|Tra2a|ENSMUSG00000029817.9|transformer 2 alpha homolog (Drosophila)
mm10_v2_chr11_+_20647149_20647156	2.11603	Sox2	ENSMUST00000109585.1|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr14_+_4415448_4415448	2.11578	Sox2	ENSMUST00000168866.1|Gm3164|ENSMUSG00000091418.2|predicted gene 3164
mm10_v2_chr5_+_130187158_130187166	2.1094	Sox2	ENSMUST00000119027.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000026390.7|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr17_-_35121990_35122053	2.10639	Sox2	ENSMUST00000173915.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide 	ENSMUST00000172765.2|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr5_+_141856692_141856787	2.08608	Sox2	ENSMUST00000074546.6|Sdk1|ENSMUSG00000039683.10|sidekick homolog 1 (chicken)
mm10_v2_chr1_-_16519201_16519270	2.08408	Sox2	ENSMUST00000159558.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000054668.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000162627.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000162007.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000128957.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000115359.3|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000151888.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr17_-_34121944_34121988	2.08278	Sox2	ENSMUST00000151986.1|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr10_+_67185730_67185768	2.07813	Sox2	ENSMUST00000173689.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr8_+_31111816_31111891	2.07705	Sox2	ENSMUST00000046941.7|Rnf122|ENSMUSG00000039328.9|ring finger protein 122
mm10_v2_chr9_-_110117379_110117445	2.06031	Sox2	ENSMUST00000111991.2|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000149199.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000035056.7|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000148287.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000127744.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr19_+_21272276_21272296	2.05891	Sox2	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr3_-_51560816_51560878	2.05865	Sox2	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr7_+_141392164_141392213	2.05771	Sox2	ENSMUST00000026576.4|Taldo1|ENSMUSG00000025503.4|transaldolase 1
mm10_v2_chr2_-_57124003_57124071	2.0573	Sox2	ENSMUST00000112629.1|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr19_-_46039442_46039481	2.04865	Sox2	ENSMUST00000137771.1|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1
mm10_v2_chr4_-_62208426_62208487	2.03542	Sox2	ENSMUST00000068822.3|Zfp37|ENSMUSG00000028389.4|zinc finger protein 37
mm10_v2_chr10_-_116473418_116473514	2.02146	Sox2	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr6_+_92092369_92092433	2.00169	Sox2	ENSMUST00000113463.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr6_+_34598500_34598529	2.00065	Sox2	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr1_-_60566708_60566769	1.99589	Sox2	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chrX_+_162901226_162901261	1.99084	Sox2	ENSMUST00000101095.2|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2
mm10_v2_chr4_-_36136463_36136463	1.97592	Sox2	ENSMUST00000098151.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr2_-_156111863_156111943	1.9695	Sox2	ENSMUST00000154889.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000079312.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000153634.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000133921.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000131377.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000183518.1|RP23-220D12.12|ENSMUSG00000098950.1|RNA-binding protein 12  	ENSMUST00000184265.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109607.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109608.2|Cpne1|ENSMUSG00000074643.6|copine I
mm10_v2_chr18_+_42511496_42511521	1.96804	Sox2	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr12_-_23968845_23968845	1.9637	Sox2	ENSMUST00000171153.1|Gm17330|ENSMUSG00000095329.1|predicted gene, 17330
mm10_v2_chr11_+_6389442_6389471	1.9546	Sox2	ENSMUST00000109786.1|Zmiz2|ENSMUSG00000041164.9|zinc finger, MIZ-type containing 2
mm10_v2_chr11_-_58938851_58938923	1.94886	Sox2	ENSMUST00000094151.5|Rnf187|ENSMUSG00000020496.8|ring finger protein 187
mm10_v2_chrX_+_47912387_47912442	1.94145	Sox2	ENSMUST00000001202.8|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe 	ENSMUST00000115020.1|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe
mm10_v2_chr10_-_125308809_125308825	1.93023	Sox2	ENSMUST00000105257.2|Slc16a7|ENSMUSG00000020102.8|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm10_v2_chr15_-_97831460_97831519	1.92913	Sox2	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr19_+_10688744_10688818	1.92388	Sox2	ENSMUST00000087951.5|Vps37c|ENSMUSG00000048832.8|vacuolar protein sorting 37C (yeast)
mm10_v2_chr12_+_111039334_111039400	1.9188	Sox2	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr11_-_69900949_69901001	1.91604	Sox2	ENSMUST00000102580.3|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr6_+_86527312_86527401	1.91209	Sox2	ENSMUST00000181928.1|1600020E01Rik|ENSMUSG00000097048.1|RIKEN cDNA 1600020E01 gene
mm10_v2_chr6_+_86404257_86404319	1.90893	Sox2	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr10_-_19011948_19011973	1.90095	Sox2	ENSMUST00000105527.1|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr11_-_114795888_114795903	1.89697	Sox2	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr3_+_14533788_14533815	1.89455	Sox2	ENSMUST00000108370.2|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr16_-_3908639_3908689	1.87996	Sox2	ENSMUST00000115859.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr14_-_40966807_40966848	1.87449	Sox2	ENSMUST00000047652.5|Tspan14|ENSMUSG00000037824.5|tetraspanin 14
mm10_v2_chr6_+_17463826_17463829	1.87321	Sox2	ENSMUST00000140070.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr12_-_34528844_34528904	1.87191	Sox2	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr5_-_30105359_30105359	1.87143	Sox2	ENSMUST00000127749.3|3110082J24Rik|ENSMUSG00000086815.3|RIKEN cDNA 3110082J24 gene
mm10_v2_chr19_-_4615647_4615700	1.86832	Sox2	ENSMUST00000113822.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr14_+_4110526_4110526	1.8619	Sox2	ENSMUST00000170207.1|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr8_+_85432686_85432686	1.85407	Sox2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr2_-_118479635_118479711	1.84111	Sox2	ENSMUST00000110862.1|Srp14|ENSMUSG00000009549.8|signal recognition particle 14 	ENSMUST00000009693.8|Srp14|ENSMUSG00000009549.8|signal recognition particle 14
mm10_v2_chr5_-_65697856_65697963	1.83125	Sox2	ENSMUST00000031104.6|Pds5a|ENSMUSG00000029202.9|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
mm10_v2_chr11_+_72796254_72796268	1.83037	Sox2	ENSMUST00000069395.5|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr11_+_6546899_6546941	1.81637	Sox2	ENSMUST00000159007.1|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr2_+_92185438_92185463	1.81355	Sox2	ENSMUST00000128781.2|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A
mm10_v2_chrX_-_38576189_38576204	1.81033	Sox2	ENSMUST00000115118.1|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr1_-_136260873_136260931	1.79763	Sox2	ENSMUST00000086395.5|Gpr25|ENSMUSG00000052759.6|G protein-coupled receptor 25
mm10_v2_chr4_-_70534904_70534987	1.79711	Sox2	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr12_-_83597140_83597177	1.79695	Sox2	ENSMUST00000048319.4|Zfyve1|ENSMUSG00000042628.7|zinc finger, FYVE domain containing 1
mm10_v2_chr7_-_127615226_127615272	1.79164	Sox2	ENSMUST00000084564.3|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr1_+_74588347_74588383	1.78634	Sox2	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr6_+_86404219_86404240	1.78399	Sox2	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr4_-_132212060_132212130	1.77116	Sox2	ENSMUST00000085181.4|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr11_+_6389330_6389397	1.76355	Sox2	ENSMUST00000012612.4|Zmiz2|ENSMUSG00000041164.9|zinc finger, MIZ-type containing 2
mm10_v2_chr14_-_19585135_19585135	1.76145	Sox2	ENSMUST00000170694.1|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr11_+_51261719_51261731	1.75534	Sox2	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr16_-_20425881_20425986	1.75262	Sox2	ENSMUST00000077867.3|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr9_+_106821874_106821994	1.7499	Sox2	ENSMUST00000159645.1|Vprbp|ENSMUSG00000040325.10|Vpr (HIV-1) binding protein
mm10_v2_chr19_-_5894100_5894155	1.74758	Sox2	ENSMUST00000055911.4|Tigd3|ENSMUSG00000044390.4|tigger transposable element derived 3
mm10_v2_chr5_+_52190650_52190704	1.7461	Sox2	ENSMUST00000180601.1|9230114K14Rik|ENSMUSG00000097145.1|RIKEN cDNA 9230114K14 gene
mm10_v2_chr1_+_9601163_9601256	1.74283	Sox2	ENSMUST00000088666.3|3110035E14Rik|ENSMUSG00000067879.3|RIKEN cDNA 3110035E14 gene
mm10_v2_chr17_+_46890621_46890652	1.74249	Sox2	ENSMUST00000040434.7|Tbcc|ENSMUSG00000036430.7|tubulin-specific chaperone C
mm10_v2_chr17_-_33760306_33760348	1.73565	Sox2	ENSMUST00000173860.1|Rab11b|ENSMUSG00000077450.6|RAB11B, member RAS oncogene family
mm10_v2_chr16_-_64786321_64786321	1.73386	Sox2	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr16_-_17911303_17911354	1.72555	Sox2	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr11_-_100613334_100613368	1.72084	Sox2	ENSMUST00000146840.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr8_+_94810446_94810461	1.71801	Sox2	ENSMUST00000034232.1|Ccl17|ENSMUSG00000031780.1|chemokine (C-C motif) ligand 17
mm10_v2_chr11_-_76763550_76763582	1.71736	Sox2	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chr11_+_106216926_106216968	1.68882	Sox2	ENSMUST00000021046.5|Ddx42|ENSMUSG00000020705.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm10_v2_chr2_-_20968526_20968625	1.68414	Sox2	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr6_+_34598530_34598587	1.68271	Sox2	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr2_+_156312589_156312633	1.68119	Sox2	ENSMUST00000073942.5|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2 	ENSMUST00000109580.1|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2
mm10_v2_chr18_+_37307445_37307462	1.67816	Sox2	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr3_+_95111013_95111087	1.6626	Sox2	ENSMUST00000009102.8|Vps72|ENSMUSG00000008958.8|vacuolar protein sorting 72 (yeast)
mm10_v2_chr16_-_50432340_50432409	1.66068	Sox2	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr1_+_135146782_135146871	1.65968	Sox2	ENSMUST00000027684.4|Arl8a|ENSMUSG00000026426.4|ADP-ribosylation factor-like 8A
mm10_v2_chr10_-_128645965_128645991	1.65366	Sox2	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr9_-_105495475_105495489	1.62979	Sox2	ENSMUST00000176036.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr7_-_127615208_127615219	1.6282	Sox2	ENSMUST00000122066.1|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr4_-_129696817_129696843	1.62564	Sox2	ENSMUST00000102588.3|Tmem39b|ENSMUSG00000053730.9|transmembrane protein 39b
mm10_v2_chr2_+_102706356_102706438	1.6247	Sox2	ENSMUST00000123759.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000111212.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000005220.4|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr5_-_142905928_142905978	1.62269	Sox2	ENSMUST00000106216.2|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr19_-_40588374_40588426	1.62139	Sox2	ENSMUST00000175932.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1 	ENSMUST00000176955.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1 	ENSMUST00000149476.2|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1
mm10_v2_chr2_-_63184170_63184195	1.61609	Sox2	ENSMUST00000112452.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr11_+_101316200_101316275	1.61308	Sox2	ENSMUST00000142640.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) 	ENSMUST00000019470.7|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr6_+_129862649_129862649	1.60856	Sox2	ENSMUST00000171980.1|Gm17631|ENSMUSG00000092047.1|predicted gene, 17631
mm10_v2_chrX_+_56317608_56317666	1.60635	Sox2	ENSMUST00000151426.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene 	ENSMUST00000138262.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene
mm10_v2_chr12_-_74316394_74316394	1.60153	Sox2	ENSMUST00000110441.1|Gm11042|ENSMUSG00000079061.3|predicted gene 11042
mm10_v2_chr15_+_88751649_88751661	1.59919	Sox2	ENSMUST00000041297.8|Zbed4|ENSMUSG00000034333.9|zinc finger, BED domain containing 4
mm10_v2_chr9_-_88522876_88522929	1.59733	Sox2	ENSMUST00000180563.2|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000183030.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000182232.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5
mm10_v2_chr2_+_90987603_90987746	1.59517	Sox2	ENSMUST00000111452.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111455.2|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr1_+_93990509_93990509	1.59452	Sox2	ENSMUST00000097632.3|Gm6086|ENSMUSG00000073608.3|predicted gene 6086
mm10_v2_chr11_-_107470699_107470726	1.59386	Sox2	ENSMUST00000103064.3|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr10_-_61452658_61452813	1.59366	Sox2	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr18_+_3382979_3383065	1.58727	Sox2	ENSMUST00000025073.5|Cul2|ENSMUSG00000024231.8|cullin 2
mm10_v2_chr13_-_78196373_78196440	1.5842	Sox2	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr7_-_30169701_30169766	1.56999	Sox2	ENSMUST00000062181.7|Zfp146|ENSMUSG00000037029.7|zinc finger protein 146
mm10_v2_chr7_-_128740471_128740525	1.56791	Sox2	ENSMUST00000119081.1|Mcmbp|ENSMUSG00000048170.8|MCM (minichromosome maintenance deficient) binding protein 	ENSMUST00000057557.7|Mcmbp|ENSMUSG00000048170.8|MCM (minichromosome maintenance deficient) binding protein
mm10_v2_chrX_+_162901762_162901870	1.5633	Sox2	ENSMUST00000112302.1|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2 	ENSMUST00000112301.1|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2
mm10_v2_chr13_-_75943812_75943950	1.56322	Sox2	ENSMUST00000022078.5|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3 	ENSMUST00000109606.1|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3
mm10_v2_chr4_+_141010644_141010696	1.55546	Sox2	ENSMUST00000071977.8|Mfap2|ENSMUSG00000060572.11|microfibrillar-associated protein 2
mm10_v2_chr4_-_148152059_148152146	1.55527	Sox2	ENSMUST00000056965.5|Fbxo6|ENSMUSG00000055401.8|F-box protein 6 	ENSMUST00000168503.1|Fbxo6|ENSMUSG00000055401.8|F-box protein 6 	ENSMUST00000152098.1|Fbxo6|ENSMUSG00000055401.8|F-box protein 6
mm10_v2_chr17_-_88065291_88065291	1.55288	Sox2	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr11_-_70220969_70221027	1.5506	Sox2	ENSMUST00000060010.2|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr4_+_129513581_129513644	1.51891	Sox2	ENSMUST00000062356.6|Marcksl1|ENSMUSG00000047945.6|MARCKS-like 1
mm10_v2_chr11_+_54303798_54303844	1.51629	Sox2	ENSMUST00000093106.5|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6
mm10_v2_chr5_-_52190484_52190524	1.51566	Sox2	ENSMUST00000031061.7|Dhx15|ENSMUSG00000029169.7|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm10_v2_chr9_-_72111651_72111712	1.51497	Sox2	ENSMUST00000185117.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr3_-_96058446_96058466	1.51232	Sox2	ENSMUST00000015891.5|Vps45|ENSMUSG00000015747.5|vacuolar protein sorting 45 (yeast)
mm10_v2_chr11_+_3895223_3895310	1.50961	Sox2	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr2_+_156065180_156065282	1.49642	Sox2	ENSMUST00000038860.5|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr16_+_43503607_43503642	1.49364	Sox2	ENSMUST00000126100.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000123047.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000156981.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr14_+_4334763_4334763	1.47602	Sox2	ENSMUST00000165466.1|2610042L04Rik|ENSMUSG00000079388.3|RIKEN cDNA 2610042L04 gene
mm10_v2_chr3_+_16183177_16183206	1.46443	Sox2	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr1_+_37997975_37998010	1.45425	Sox2	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr7_-_29505447_29505473	1.45242	Sox2	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr18_+_37725706_37725754	1.44912	Sox2	ENSMUST00000066149.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr7_-_24972685_24972728	1.44625	Sox2	ENSMUST00000076961.7|Rabac1|ENSMUSG00000003380.10|Rab acceptor 1 (prenylated)
mm10_v2_chr9_+_65676566_65676621	1.44329	Sox2	ENSMUST00000147732.2|Oaz2|ENSMUSG00000040652.9|ornithine decarboxylase antizyme 2 	ENSMUST00000136166.2|Oaz2|ENSMUSG00000040652.9|ornithine decarboxylase antizyme 2
mm10_v2_chr10_+_82859198_82859217	1.44271	Sox2	ENSMUST00000020484.6|Txnrd1|ENSMUSG00000020250.9|thioredoxin reductase 1
mm10_v2_chr12_-_22623087_22623087	1.44263	Sox2	ENSMUST00000171036.1|Gm17391|ENSMUSG00000095261.1|predicted gene, 17391
mm10_v2_chr5_-_139484475_139484549	1.4352	Sox2	ENSMUST00000110851.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A 	ENSMUST00000079996.6|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr4_+_43957678_43957735	1.43504	Sox2	ENSMUST00000107855.1|Glipr2|ENSMUSG00000028480.8|GLI pathogenesis-related 2
mm10_v2_chr2_-_175175871_175175871	1.43411	Sox2	ENSMUST00000109054.2|Gm14443|ENSMUSG00000078902.3|predicted gene 14443
mm10_v2_chr17_+_20570362_20570362	1.43161	Sox2	ENSMUST00000095633.3|Gm5145|ENSMUSG00000071273.3|predicted pseudogene 5145
mm10_v2_chr18_+_76242135_76242174	1.43009	Sox2	ENSMUST00000172198.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chrX_-_7899220_7899271	1.4208	Sox2	ENSMUST00000033497.2|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr13_-_54565368_54565435	1.41968	Sox2	ENSMUST00000026989.8|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chr3_+_9403049_9403092	1.41827	Sox2	ENSMUST00000180874.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181331.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181930.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene
mm10_v2_chr2_+_172472512_172472535	1.41367	Sox2	ENSMUST00000029007.2|Fam209|ENSMUSG00000027505.2|family with sequence similarity 209
mm10_v2_chr14_-_6287250_6287250	1.40965	Sox2	ENSMUST00000170104.2|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr4_+_136310991_136311054	1.38206	Sox2	ENSMUST00000084219.5|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr17_-_12769605_12769700	1.37941	Sox2	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr12_+_19954505_19954505	1.37875	Sox2	ENSMUST00000179133.1|Gm21863|ENSMUSG00000095470.1|predicted gene, 21863
mm10_v2_chr9_+_20643290_20643342	1.37005	Sox2	ENSMUST00000129414.2|Ubl5|ENSMUSG00000084786.3|ubiquitin-like 5
mm10_v2_chr6_+_70726430_70726472	1.36331	Sox2	ENSMUST00000103410.1|Igkc|ENSMUSG00000076609.1|immunoglobulin kappa constant
mm10_v2_chr18_+_60212080_60212122	1.36178	Sox2	ENSMUST00000031549.5|Gm4951|ENSMUSG00000073555.1|predicted gene 4951
mm10_v2_chr14_-_7568566_7568566	1.35056	Sox2	ENSMUST00000163790.1|Gm3558|ENSMUSG00000079364.3|predicted gene 3558
mm10_v2_chr7_-_111082997_111083037	1.3314	Sox2	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chrX_+_159459125_159459165	1.32342	Sox2	ENSMUST00000043151.5|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000112470.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000156172.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2
mm10_v2_chr3_-_144202300_144202345	1.32123	Sox2	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr11_+_3289168_3289281	1.31477	Sox2	ENSMUST00000134089.1|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1
mm10_v2_chr14_-_5389049_5389049	1.31367	Sox2	ENSMUST00000177986.1|Gm3500|ENSMUSG00000096003.1|predicted gene 3500
mm10_v2_chr13_-_54565299_54565362	1.3109	Sox2	ENSMUST00000153065.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000126295.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000143144.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000132136.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chr14_+_14703025_14703073	1.30777	Sox2	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr1_-_37536232_37536236	1.30666	Sox2	ENSMUST00000042161.8|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr5_+_88720855_88720876	1.30449	Sox2	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr18_+_64340225_64340364	1.30163	Sox2	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr12_+_21111720_21111776	1.30046	Sox2	ENSMUST00000064595.8|Asap2|ENSMUSG00000052632.9|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENSMUST00000101562.4|Asap2|ENSMUSG00000052632.9|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENSMUST00000090834.6|Asap2|ENSMUSG00000052632.9|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
mm10_v2_chr7_+_100493337_100493370	1.29712	Sox2	ENSMUST00000126534.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr16_+_17146937_17146985	1.29533	Sox2	ENSMUST00000115706.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial) 	ENSMUST00000069064.4|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr3_-_89998656_89998704	1.29496	Sox2	ENSMUST00000079724.4|Hax1|ENSMUSG00000027944.9|HCLS1 associated X-1
mm10_v2_chr11_-_86807624_86807746	1.2862	Sox2	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr11_+_3649759_3649759	1.28379	Sox2	ENSMUST00000140242.1|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr14_+_4726775_4726775	1.27987	Sox2	ENSMUST00000165619.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr14_-_5961745_5961745	1.27719	Sox2	ENSMUST00000163885.1|Gm3248|ENSMUSG00000091275.1|predicted gene 3248
mm10_v2_chr15_+_75940952_75941015	1.27644	Sox2	ENSMUST00000037260.6|Zfp623|ENSMUSG00000050846.8|zinc finger protein 623
mm10_v2_chr1_+_161142706_161142767	1.27579	Sox2	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr3_+_14533817_14533866	1.27352	Sox2	ENSMUST00000169079.1|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1 	ENSMUST00000091325.3|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr1_+_158362330_158362411	1.27318	Sox2	ENSMUST00000170718.1|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr2_+_160731684_160731760	1.26032	Sox2	ENSMUST00000174885.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1 	ENSMUST00000109462.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr1_+_158362261_158362304	1.25024	Sox2	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr1_-_171287916_171287929	1.23889	Sox2	ENSMUST00000111305.1|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr11_+_115381906_115381933	1.23396	Sox2	ENSMUST00000053288.5|Cdr2l|ENSMUSG00000050910.5|cerebellar degeneration-related protein 2-like
mm10_v2_chr10_-_11080956_11081023	1.23266	Sox2	ENSMUST00000105560.1|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1
mm10_v2_chr13_-_9764943_9764994	1.22709	Sox2	ENSMUST00000110634.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr10_+_37139558_37139558	1.22269	Sox2	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr10_+_80150448_80150482	1.21306	Sox2	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr5_+_143817786_143817818	1.21271	Sox2	ENSMUST00000100487.4|Eif2ak1|ENSMUSG00000029613.9|eukaryotic translation initiation factor 2 alpha kinase 1
mm10_v2_chr6_-_99266494_99266540	1.20821	Sox2	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr11_-_69900886_69900929	1.20799	Sox2	ENSMUST00000108621.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000100969.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr11_-_116168138_116168205	1.2053	Sox2	ENSMUST00000139020.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1 	ENSMUST00000103031.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1 	ENSMUST00000124828.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1
mm10_v2_chr11_+_64979025_64979110	1.20454	Sox2	ENSMUST00000071891.5|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000108697.1|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000101049.2|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli)
mm10_v2_chr14_+_26514554_26514554	1.1978	Sox2	ENSMUST00000104927.1|Gm2178|ENSMUSG00000078128.1|predicted gene 2178
mm10_v2_chr3_-_158031705_158031774	1.19693	Sox2	ENSMUST00000072875.8|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr19_-_41848076_41848132	1.19573	Sox2	ENSMUST00000059231.2|Frat2|ENSMUSG00000047604.2|frequently rearranged in advanced T cell lymphomas 2
mm10_v2_chr4_-_114987220_114987256	1.19097	Sox2	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr5_+_19907502_19907551	1.19068	Sox2	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr2_-_156111954_156111978	1.18904	Sox2	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr12_-_23010209_23010284	1.18857	Sox2	ENSMUST00000141777.1|2410018L13Rik|ENSMUSG00000073164.5|RIKEN cDNA 2410018L13 gene 	ENSMUST00000127001.1|2410018L13Rik|ENSMUSG00000073164.5|RIKEN cDNA 2410018L13 gene 	ENSMUST00000135421.1|2410018L13Rik|ENSMUSG00000073164.5|RIKEN cDNA 2410018L13 gene 	ENSMUST00000149246.1|2410018L13Rik|ENSMUSG00000073164.5|RIKEN cDNA 2410018L13 gene
mm10_v2_chr2_+_92185467_92185494	1.18074	Sox2	ENSMUST00000111291.2|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A
mm10_v2_chr11_+_62551676_62551735	1.16586	Sox2	ENSMUST00000136938.1|Ubb|ENSMUSG00000019505.7|ubiquitin B
mm10_v2_chr10_+_80755196_80755239	1.16416	Sox2	ENSMUST00000105336.2|Dot1l|ENSMUSG00000061589.8|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm10_v2_chr11_-_69900930_69900941	1.15371	Sox2	ENSMUST00000018714.6|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000128046.1|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr5_-_139484420_139484473	1.14854	Sox2	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr11_-_97629685_97629716	1.14337	Sox2	ENSMUST00000052281.4|E130012A19Rik|ENSMUSG00000043439.4|RIKEN cDNA E130012A19 gene
mm10_v2_chr9_+_96259246_96259261	1.14194	Sox2	ENSMUST00000179065.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000165768.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr8_+_127063893_127063916	1.13757	Sox2	ENSMUST00000162309.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr15_-_100403243_100403270	1.13521	Sox2	ENSMUST00000124324.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr3_+_138443085_138443176	1.12389	Sox2	ENSMUST00000005964.2|Adh5|ENSMUSG00000028138.2|alcohol dehydrogenase 5 (class III), chi polypeptide
mm10_v2_chr11_-_106160708_106160860	1.11366	Sox2	ENSMUST00000106875.1|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr13_+_83504032_83504050	1.10883	Sox2	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr9_-_57765845_57765876	1.10876	Sox2	ENSMUST00000065330.6|Clk3|ENSMUSG00000032316.7|CDC-like kinase 3
mm10_v2_chr4_-_34882919_34882964	1.10241	Sox2	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr9_+_55209190_55209297	1.10135	Sox2	ENSMUST00000146201.1|Fbxo22|ENSMUSG00000032309.9|F-box protein 22
mm10_v2_chr14_-_5880382_5880382	1.10082	Sox2	ENSMUST00000164484.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr2_-_113758638_113758655	1.10053	Sox2	ENSMUST00000099575.3|Grem1|ENSMUSG00000074934.3|gremlin 1
mm10_v2_chr1_+_87404916_87404964	1.09778	Sox2	ENSMUST00000173152.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000173663.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr12_-_80436571_80436603	1.09584	Sox2	ENSMUST00000054145.6|Dcaf5|ENSMUSG00000049106.6|DDB1 and CUL4 associated factor 5
mm10_v2_chr7_+_100494044_100494088	1.09524	Sox2	ENSMUST00000153287.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr16_+_11066292_11066381	1.09446	Sox2	ENSMUST00000089011.4|Snn|ENSMUSG00000037972.6|stannin
mm10_v2_chr4_+_34550937_34550937	1.09343	Sox2	ENSMUST00000084299.5|Akirin2|ENSMUSG00000028291.7|akirin 2
mm10_v2_chr19_-_40588338_40588371	1.09255	Sox2	ENSMUST00000176939.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1
mm10_v2_chr2_+_24949747_24949801	1.08779	Sox2	ENSMUST00000028350.3|Zmynd19|ENSMUSG00000026974.6|zinc finger, MYND domain containing 19
mm10_v2_chr19_+_6950746_6950767	1.08504	Sox2	ENSMUST00000145463.1|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr9_+_69989466_69989539	1.08341	Sox2	ENSMUST00000034754.5|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000085393.6|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000117450.1|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2
mm10_v2_chr9_-_121995962_121996041	1.07125	Sox2	ENSMUST00000084743.5|Pomgnt2|ENSMUSG00000066235.6|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
mm10_v2_chr1_+_165788746_165788769	1.07043	Sox2	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr6_+_125096145_125096162	1.06943	Sox2	ENSMUST00000112390.1|Chd4|ENSMUSG00000063870.6|chromodomain helicase DNA binding protein 4
mm10_v2_chr11_-_79254663_79254685	1.06717	Sox2	ENSMUST00000017821.5|Wsb1|ENSMUSG00000017677.5|WD repeat and SOCS box-containing 1
mm10_v2_chr17_-_12916345_12916408	1.06596	Sox2	ENSMUST00000079121.3|Mrpl18|ENSMUSG00000057388.3|mitochondrial ribosomal protein L18
mm10_v2_chr8_-_67974567_67974596	1.06187	Sox2	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr11_-_77607812_77607860	1.0517	Sox2	ENSMUST00000058496.7|Taok1|ENSMUSG00000017291.7|TAO kinase 1
mm10_v2_chr10_-_81060134_81060204	1.04603	Sox2	ENSMUST00000005067.5|Sgta|ENSMUSG00000004937.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm10_v2_chr10_+_76449074_76449093	1.03813	Sox2	ENSMUST00000092406.5|2610028H24Rik|ENSMUSG00000009114.11|RIKEN cDNA 2610028H24 gene
mm10_v2_chr9_+_57825918_57825945	1.03751	Sox2	ENSMUST00000165858.1|Gm17231|ENSMUSG00000091908.1|predicted gene 17231
mm10_v2_chr11_+_98203314_98203335	1.03667	Sox2	ENSMUST00000003203.7|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12 	ENSMUST00000107538.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr3_+_88716838_88716883	1.02179	Sox2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr2_-_86347764_86347764	1.0189	Sox2	ENSMUST00000099894.2|Olfr1055|ENSMUSG00000075189.2|olfactory receptor 1055
mm10_v2_chr4_+_127021311_127021339	1.00884	Sox2	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr19_-_4615453_4615512	1.00716	Sox2	ENSMUST00000053597.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr2_+_164685080_164685152	1.00468	Sox2	ENSMUST00000088260.1|Wfdc13|ENSMUSG00000067704.1|WAP four-disulfide core domain 13
mm10_v2_chr2_+_119675062_119675095	1.00305	Sox2	ENSMUST00000028767.8|Rtf1|ENSMUSG00000027304.9|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr16_-_20730544_20730627	1.00143	Sox2	ENSMUST00000076422.5|Thpo|ENSMUSG00000022847.8|thrombopoietin
mm10_v2_chr13_-_41220162_41220195	0.998346	Sox2	ENSMUST00000117096.1|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr6_-_56797637_56797757	0.987345	Sox2	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr9_-_66124872_66124886	0.98636	Sox2	ENSMUST00000034946.8|Snx1|ENSMUSG00000032382.8|sorting nexin 1
mm10_v2_chr16_+_62814676_62814703	0.979599	Sox2	ENSMUST00000055557.5|Stx19|ENSMUSG00000047854.5|syntaxin 19
mm10_v2_chr1_-_25228814_25228834	0.978185	Sox2	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr18_+_35599219_35599269	0.9777	Sox2	ENSMUST00000115734.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr10_-_95324072_95324114	0.977482	Sox2	ENSMUST00000053594.5|Cradd|ENSMUSG00000045867.9|CASP2 and RIPK1 domain containing adaptor with death domain
mm10_v2_chr4_+_136310936_136310947	0.974813	Sox2	ENSMUST00000131671.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr4_-_132212255_132212303	0.971488	Sox2	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr7_-_130519961_130520004	0.967582	Sox2	ENSMUST00000178534.1|Ate1|ENSMUSG00000030850.9|arginyltransferase 1 	ENSMUST00000094017.3|Ate1|ENSMUSG00000030850.9|arginyltransferase 1
mm10_v2_chr4_-_120815703_120815761	0.941036	Sox2	ENSMUST00000120779.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma
mm10_v2_chrX_+_7728439_7728510	0.928211	Sox2	ENSMUST00000033489.7|Praf2|ENSMUSG00000031149.7|PRA1 domain family 2
mm10_v2_chr7_+_5056856_5056916	0.924229	Sox2	ENSMUST00000131368.1|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106 	ENSMUST00000123956.1|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr7_+_126760591_126760599	0.921792	Sox2	ENSMUST00000091328.2|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr2_-_64975762_64975795	0.921191	Sox2	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr7_+_4915202_4915230	0.915547	Sox2	ENSMUST00000116354.2|Zfp628|ENSMUSG00000074406.4|zinc finger protein 628
mm10_v2_chr10_+_67572042_67572076	0.914158	Sox2	ENSMUST00000099661.2|Gm10797|ENSMUSG00000074999.2|predicted gene 10797
mm10_v2_chr7_+_24507122_24507139	0.909932	Sox2	ENSMUST00000177205.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr17_+_53566971_53567023	0.908548	Sox2	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr2_+_125859134_125859225	0.908466	Sox2	ENSMUST00000028636.6|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000125084.1|Galk2|ENSMUSG00000027207.9|galactokinase 2
mm10_v2_chr15_-_36794498_36794547	0.898407	Sox2	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr13_+_49341549_49341623	0.893993	Sox2	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chrX_-_94542037_94542143	0.892457	Sox2	ENSMUST00000026142.7|Maged1|ENSMUSG00000025151.10|melanoma antigen, family D, 1
mm10_v2_chr10_-_117063764_117063814	0.890084	Sox2	ENSMUST00000047672.7|Cct2|ENSMUSG00000034024.7|chaperonin containing Tcp1, subunit 2 (beta)
mm10_v2_chr14_+_66868850_66868850	0.889078	Sox2	ENSMUST00000100453.1|Gm5464|ENSMUSG00000075553.1|predicted gene 5464
mm10_v2_chr19_+_30030439_30030528	0.888524	Sox2	ENSMUST00000025739.7|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr5_-_33274966_33275010	0.884634	Sox2	ENSMUST00000079746.6|Ctbp1|ENSMUSG00000037373.9|C-terminal binding protein 1
mm10_v2_chr10_+_127063527_127063538	0.882585	Sox2	ENSMUST00000006911.5|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4
mm10_v2_chr14_-_55722223_55722264	0.879295	Sox2	ENSMUST00000163889.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr18_+_76241892_76242046	0.877393	Sox2	ENSMUST00000171256.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr4_+_155694311_155694375	0.876526	Sox2	ENSMUST00000099265.2|B930041F14Rik|ENSMUSG00000074738.2|RIKEN cDNA B930041F14 gene
mm10_v2_chrX_-_140543177_140543195	0.876205	Sox2	ENSMUST00000055738.5|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr17_-_56935388_56935504	0.875396	Sox2	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr17_-_33760451_33760530	0.867249	Sox2	ENSMUST00000057373.7|Rab11b|ENSMUSG00000077450.6|RAB11B, member RAS oncogene family
mm10_v2_chr2_-_26910569_26910677	0.853648	Sox2	ENSMUST00000015920.5|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000139815.1|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000102899.3|Med22|ENSMUSG00000015776.6|mediator complex subunit 22
mm10_v2_chr17_-_48409729_48409906	0.846582	Sox2	ENSMUST00000160319.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000159535.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000078800.6|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000046719.7|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000162460.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha
mm10_v2_chr19_+_8941865_8942050	0.8461	Sox2	ENSMUST00000096240.2|Mta2|ENSMUSG00000071646.3|metastasis-associated gene family, member 2
mm10_v2_chr12_+_19606929_19606929	0.843446	Sox2	ENSMUST00000105167.1|Gm9257|ENSMUSG00000095254.1|predicted gene 9257
mm10_v2_chr1_+_75546449_75546514	0.8384	Sox2	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr12_+_18853872_18853872	0.833593	Sox2	ENSMUST00000101582.3|Gm3944|ENSMUSG00000094947.1|predicted gene 3944
mm10_v2_chr12_+_20415938_20415938	0.8296	Sox2	ENSMUST00000101568.3|Gm10479|ENSMUSG00000073184.3|predicted gene 10479
mm10_v2_chr13_-_47043116_47043343	0.823715	Sox2	ENSMUST00000110118.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000124948.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000021806.3|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000136864.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase
mm10_v2_chr1_+_175632169_175632185	0.822689	Sox2	ENSMUST00000097458.3|Kmo|ENSMUSG00000039783.9|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm10_v2_chr14_+_31019183_31019214	0.82175	Sox2	ENSMUST00000052239.5|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr2_-_37703275_37703290	0.820904	Sox2	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr2_+_176831140_176831140	0.819474	Sox2	ENSMUST00000122218.2|Gm14408|ENSMUSG00000078876.4|predicted gene 14408 	ENSMUST00000126726.1|Gm14408|ENSMUSG00000078876.4|predicted gene 14408
mm10_v2_chr13_-_103920295_103920367	0.814635	Sox2	ENSMUST00000169083.1|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chrX_+_74270812_74270979	0.813915	Sox2	ENSMUST00000008826.7|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000151702.1|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000074085.5|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000135690.1|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10
mm10_v2_chr6_-_38875965_38875986	0.812819	Sox2	ENSMUST00000160360.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr15_-_73423180_73423218	0.806682	Sox2	ENSMUST00000110036.2|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2 	ENSMUST00000170939.1|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2
mm10_v2_chr19_+_8953826_8953856	0.8003	Sox2	ENSMUST00000096239.5|Tut1|ENSMUSG00000071645.5|terminal uridylyl transferase 1, U6 snRNA-specific
mm10_v2_chr4_+_154869585_154869636	0.800091	Sox2	ENSMUST00000079269.7|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000163732.1|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000080559.6|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1
mm10_v2_chrX_+_9272756_9272805	0.796648	Sox2	ENSMUST00000015486.6|Xk|ENSMUSG00000015342.6|Kell blood group precursor (McLeod phenotype) homolog
mm10_v2_chr9_+_58134535_58134810	0.790658	Sox2	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr9_-_110624361_110624439	0.786937	Sox2	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr7_-_19861299_19861299	0.783337	Sox2	ENSMUST00000014830.7|Ceacam16|ENSMUSG00000014686.7|carcinoembryonic antigen-related cell adhesion molecule 16
mm10_v2_chr14_+_52197502_52197518	0.781246	Sox2	ENSMUST00000180857.1|Gm26590|ENSMUSG00000097533.1|predicted gene, 26590
mm10_v2_chr17_-_32284088_32284123	0.779415	Sox2	ENSMUST00000119123.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000003726.8|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000121285.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000120276.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000114475.2|Brd4|ENSMUSG00000024002.10|bromodomain containing 4
mm10_v2_chr17_-_34615965_34615978	0.774744	Sox2	ENSMUST00000097345.3|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8 	ENSMUST00000015611.7|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr12_+_29938036_29938059	0.771584	Sox2	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr7_-_118705708_118705786	0.769364	Sox2	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr13_-_17944151_17944239	0.757515	Sox2	ENSMUST00000009003.7|Rala|ENSMUSG00000008859.7|v-ral simian leukemia viral oncogene homolog A (ras related)
mm10_v2_chr7_-_105787567_105787654	0.753956	Sox2	ENSMUST00000144189.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr17_+_26252915_26252983	0.74924	Sox2	ENSMUST00000114976.2|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like 	ENSMUST00000140427.1|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like 	ENSMUST00000119928.1|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like
mm10_v2_chr11_+_105181793_105181982	0.744838	Sox2	ENSMUST00000092537.3|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis) 	ENSMUST00000015107.6|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis) 	ENSMUST00000145048.1|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr7_-_120982260_120982312	0.736192	Sox2	ENSMUST00000033169.8|Cdr2|ENSMUSG00000030878.10|cerebellar degeneration-related 2
mm10_v2_chr12_+_84996487_84996496	0.727511	Sox2	ENSMUST00000101202.3|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr15_+_34082664_34082734	0.724117	Sox2	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chr13_+_56703504_56703668	0.722662	Sox2	ENSMUST00000109874.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr12_-_73113407_73113456	0.720696	Sox2	ENSMUST00000175693.1|Six4|ENSMUSG00000034460.8|sine oculis-related homeobox 4
mm10_v2_chr2_+_175010241_175010319	0.716256	Sox2	ENSMUST00000109069.1|Gm14444|ENSMUSG00000078906.3|predicted gene 14444 	ENSMUST00000109070.2|Gm14444|ENSMUSG00000078906.3|predicted gene 14444
mm10_v2_chr17_-_23586214_23586269	0.713607	Sox2	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr6_-_23248264_23248390	0.713249	Sox2	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr5_-_142905816_142905832	0.707915	Sox2	ENSMUST00000171419.1|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr15_+_102977032_102977032	0.706853	Sox2	ENSMUST00000001706.6|Hoxc9|ENSMUSG00000036139.6|homeobox C9
mm10_v2_chr1_+_136624901_136624949	0.703763	Sox2	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr11_+_94044111_94044121	0.700009	Sox2	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr2_+_156065738_156065760	0.697235	Sox2	ENSMUST00000137966.1|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr4_+_116557658_116557724	0.696443	Sox2	ENSMUST00000030460.8|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr14_+_101840501_101840554	0.693211	Sox2	ENSMUST00000159026.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr3_-_95995662_95995692	0.691932	Sox2	ENSMUST00000123006.1|Plekho1|ENSMUSG00000015745.3|pleckstrin homology domain containing, family O member 1
mm10_v2_chr5_+_145083830_145083887	0.689834	Sox2	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr4_-_129696579_129696620	0.688762	Sox2	ENSMUST00000137640.1|Tmem39b|ENSMUSG00000053730.9|transmembrane protein 39b
mm10_v2_chr11_+_114851142_114851173	0.683557	Sox2	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr2_+_92184106_92184310	0.675419	Sox2	ENSMUST00000111294.1|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A 	ENSMUST00000111293.2|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A 	ENSMUST00000162146.1|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A 	ENSMUST00000111292.1|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A 	ENSMUST00000162497.1|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A
mm10_v2_chr11_-_33843526_33843629	0.674341	Sox2	ENSMUST00000065970.5|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1 	ENSMUST00000109340.2|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1
mm10_v2_chr2_-_180042401_180042438	0.659951	Sox2	ENSMUST00000029082.8|Psma7|ENSMUSG00000027566.8|proteasome (prosome, macropain) subunit, alpha type 7
mm10_v2_chr2_+_122426432_122426477	0.654062	Sox2	ENSMUST00000110525.1|Slc28a2|ENSMUSG00000027219.7|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
mm10_v2_chr2_-_177578199_177578210	0.65353	Sox2	ENSMUST00000108945.1|Gm14406|ENSMUSG00000078865.2|predicted gene 14406 	ENSMUST00000108943.1|Gm14406|ENSMUSG00000078865.2|predicted gene 14406
mm10_v2_chr11_+_5788480_5788560	0.645259	Sox2	ENSMUST00000109845.1|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000020769.7|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000102928.4|Dbnl|ENSMUSG00000020476.8|drebrin-like
mm10_v2_chr1_-_171287931_171287991	0.636559	Sox2	ENSMUST00000111306.3|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21 	ENSMUST00000065941.5|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr13_+_21945084_21945140	0.635737	Sox2	ENSMUST00000176511.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000102978.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000152258.2|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like)
mm10_v2_chr7_-_84409959_84410002	0.627106	Sox2	ENSMUST00000085077.3|Arnt2|ENSMUSG00000015709.8|aryl hydrocarbon receptor nuclear translocator 2
mm10_v2_chr4_+_136310952_136310984	0.61884	Sox2	ENSMUST00000105850.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R 	ENSMUST00000148843.3|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr4_+_155812489_155812529	0.617964	Sox2	ENSMUST00000030944.4|Ccnl2|ENSMUSG00000029068.10|cyclin L2
mm10_v2_chr17_+_69383768_69383840	0.616807	Sox2	ENSMUST00000112676.2|Zbtb14|ENSMUSG00000049672.8|zinc finger and BTB domain containing 14
mm10_v2_chr2_-_146511899_146511979	0.604885	Sox2	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr3_-_58885212_58885354	0.604675	Sox2	ENSMUST00000055636.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000072551.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000051408.7|Clrn1|ENSMUSG00000043850.9|clarin 1
mm10_v2_chr13_+_55635002_55635036	0.593487	Sox2	ENSMUST00000172272.1|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENSMUST00000099479.3|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm10_v2_chr8_+_123653903_123653929	0.592022	Sox2	ENSMUST00000045487.3|Rhou|ENSMUSG00000039960.5|ras homolog gene family, member U
mm10_v2_chr17_-_35838259_35838306	0.581091	Sox2	ENSMUST00000001566.8|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr6_-_38876163_38876234	0.577839	Sox2	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr17_-_28486082_28486149	0.57782	Sox2	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr17_+_12916329_12916447	0.570905	Sox2	ENSMUST00000089024.6|Tcp1|ENSMUSG00000068039.6|t-complex protein 1 	ENSMUST00000151287.1|Tcp1|ENSMUSG00000068039.6|t-complex protein 1 	ENSMUST00000143961.1|Tcp1|ENSMUSG00000068039.6|t-complex protein 1
mm10_v2_chr4_+_108460000_108460030	0.564666	Sox2	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr2_-_146511992_146512015	0.560071	Sox2	ENSMUST00000109986.2|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr4_+_123016590_123016613	0.548448	Sox2	ENSMUST00000102649.3|Trit1|ENSMUSG00000028653.10|tRNA isopentenyltransferase 1
mm10_v2_chr5_+_105876532_105876585	0.524118	Sox2	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr5_-_138171216_138171246	0.517961	Sox2	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr14_+_69029289_69029414	0.509521	Sox2	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr12_+_84996309_84996419	0.509239	Sox2	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr16_-_3908596_3908623	0.508015	Sox2	ENSMUST00000123235.2|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr12_-_36042476_36042516	0.505909	Sox2	ENSMUST00000020896.8|Tspan13|ENSMUSG00000020577.9|tetraspanin 13
mm10_v2_chr2_-_125859139_125859221	0.492127	Sox2	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr15_-_95528702_95528777	0.491004	Sox2	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr2_+_18055203_18055237	0.490905	Sox2	ENSMUST00000028076.8|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chrX_+_18162575_18162657	0.487543	Sox2	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr2_+_180581220_180581304	0.487435	Sox2	ENSMUST00000169630.1|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr2_-_67194695_67194736	0.485796	Sox2	ENSMUST00000147939.1|Gm13598|ENSMUSG00000086908.1|predicted gene 13598
mm10_v2_chr17_-_25273155_25273265	0.48057	Sox2	ENSMUST00000173231.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr9_-_110117303_110117353	0.479384	Sox2	ENSMUST00000136969.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr7_-_37772868_37772891	0.477671	Sox2	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr1_-_139377094_139377110	0.461583	Sox2	ENSMUST00000131586.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila) 	ENSMUST00000145244.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr3_+_89215192_89215243	0.460047	Sox2	ENSMUST00000142051.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3 	ENSMUST00000119084.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr7_-_126475082_126475130	0.457769	Sox2	ENSMUST00000032978.6|Sh2b1|ENSMUSG00000030733.9|SH2B adaptor protein 1
mm10_v2_chr1_-_160212864_160212892	0.457562	Sox2	ENSMUST00000014370.5|Cacybp|ENSMUSG00000014226.5|calcyclin binding protein
mm10_v2_chr9_+_65676517_65676556	0.455832	Sox2	ENSMUST00000153700.2|Oaz2|ENSMUSG00000040652.9|ornithine decarboxylase antizyme 2 	ENSMUST00000046490.7|Oaz2|ENSMUSG00000040652.9|ornithine decarboxylase antizyme 2
mm10_v2_chr4_+_128727585_128727710	0.443627	Sox2	ENSMUST00000106079.3|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila) 	ENSMUST00000133439.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr16_+_31663935_31664039	0.438861	Sox2	ENSMUST00000100001.3|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila) 	ENSMUST00000064477.7|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr17_+_35135695_35135781	0.430174	Sox2	ENSMUST00000174478.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000174281.2|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173550.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr3_+_89215170_89215181	0.425019	Sox2	ENSMUST00000029682.4|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr3_-_34351685_34351715	0.422899	Sox2	ENSMUST00000174114.1|Gm20514|ENSMUSG00000092355.1|predicted gene 20514
mm10_v2_chr17_-_25273562_25273638	0.420705	Sox2	ENSMUST00000173621.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000172520.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr17_-_25273534_25273557	0.407992	Sox2	ENSMUST00000174031.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr5_-_125389915_125390055	0.406998	Sox2	ENSMUST00000136312.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr19_+_5024006_5024155	0.402459	Sox2	ENSMUST00000025826.5|Slc29a2|ENSMUSG00000024891.5|solute carrier family 29 (nucleoside transporters), member 2
mm10_v2_chr14_-_55722176_55722211	0.394252	Sox2	ENSMUST00000169237.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit 	ENSMUST00000062861.7|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr3_-_119783262_119783388	0.392432	Sox2	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr1_+_180641330_180641374	0.386551	Sox2	ENSMUST00000085804.5|Lin9|ENSMUSG00000058729.7|lin-9 homolog (C. elegans)
mm10_v2_chr2_-_11502025_11502049	0.382481	Sox2	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr10_-_62527438_62527459	0.357706	Sox2	ENSMUST00000160987.1|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr3_+_88716884_88716906	0.353971	Sox2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr15_-_98534221_98534305	0.352819	Sox2	ENSMUST00000116400.2|Kansl2|ENSMUSG00000022992.10|KAT8 regulatory NSL complex subunit 2 	ENSMUST00000023727.10|Kansl2|ENSMUSG00000022992.10|KAT8 regulatory NSL complex subunit 2
mm10_v2_chr7_+_5057161_5057197	0.352072	Sox2	ENSMUST00000045543.5|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr19_-_5802640_5802675	0.350629	Sox2	ENSMUST00000173523.1|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 	ENSMUST00000173499.1|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 	ENSMUST00000172812.2|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm10_v2_chr8_-_124663368_124663383	0.348448	Sox2	ENSMUST00000034464.6|2310022B05Rik|ENSMUSG00000031983.6|RIKEN cDNA 2310022B05 gene
mm10_v2_chr11_+_72796164_72796246	0.337404	Sox2	ENSMUST00000172220.1|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr1_+_155158703_155158776	0.336665	Sox2	ENSMUST00000027743.7|Stx6|ENSMUSG00000026470.9|syntaxin 6
mm10_v2_chr8_+_71464910_71465000	0.326446	Sox2	ENSMUST00000048914.6|Mrpl34|ENSMUSG00000034880.6|mitochondrial ribosomal protein L34
mm10_v2_chr2_+_163122605_163122620	0.325623	Sox2	ENSMUST00000144092.1|Gm11454|ENSMUSG00000086152.1|predicted gene 11454
mm10_v2_chr5_+_30013141_30013161	0.32238	Sox2	ENSMUST00000026845.7|Il6|ENSMUSG00000025746.7|interleukin 6
mm10_v2_chr6_+_100833606_100833663	0.311622	Sox2	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr9_+_110132015_110132102	0.303609	Sox2	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr9_+_45906513_45906569	0.301745	Sox2	ENSMUST00000039059.6|Pcsk7|ENSMUSG00000035382.8|proprotein convertase subtilisin/kexin type 7
mm10_v2_chr18_+_12741324_12741355	0.298089	Sox2	ENSMUST00000115857.2|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000121018.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000119108.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm10_v2_chr11_-_117040182_117040200	0.296229	Sox2	ENSMUST00000152401.1|Gm11728|ENSMUSG00000086902.1|predicted gene 11728 	ENSMUST00000150628.1|Gm11728|ENSMUSG00000086902.1|predicted gene 11728
mm10_v2_chr2_-_175131864_175131864	0.286157	Sox2	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr11_+_32533290_32533305	0.282644	Sox2	ENSMUST00000102821.3|Stk10|ENSMUSG00000020272.8|serine/threonine kinase 10
mm10_v2_chr13_+_56702983_56703112	0.280818	Sox2	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr19_+_23619742_23619742	0.273118	Sox2	ENSMUST00000104916.2|Gm9493|ENSMUSG00000044424.3|predicted gene 9493
mm10_v2_chr2_-_177925604_177925613	0.272916	Sox2	ENSMUST00000108934.2|C330013J21Rik|ENSMUSG00000074529.4|RIKEN cDNA C330013J21 gene 	ENSMUST00000081529.4|C330013J21Rik|ENSMUSG00000074529.4|RIKEN cDNA C330013J21 gene
mm10_v2_chr17_-_35838208_35838243	0.26858	Sox2	ENSMUST00000134978.2|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr10_+_62133082_62133098	0.260649	Sox2	ENSMUST00000050103.1|Neurog3|ENSMUSG00000044312.3|neurogenin 3
mm10_v2_chr18_+_82475133_82475162	0.250568	Sox2	ENSMUST00000091789.4|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000114676.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000047865.7|Mbp|ENSMUSG00000041607.10|myelin basic protein
mm10_v2_chr17_+_34898463_34898501	0.237594	Sox2	ENSMUST00000114033.2|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2 	ENSMUST00000078061.6|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2
mm10_v2_chr12_-_24096968_24096968	0.23397	Sox2	ENSMUST00000101538.3|9030624G23Rik|ENSMUSG00000073158.3|RIKEN cDNA 9030624G23 gene
mm10_v2_chr16_-_8672145_8672161	0.233663	Sox2	ENSMUST00000008537.8|Carhsp1|ENSMUSG00000008393.8|calcium regulated heat stable protein 1
mm10_v2_chr3_-_144205165_144205220	0.227815	Sox2	ENSMUST00000120539.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr18_+_11839220_11839475	0.225895	Sox2	ENSMUST00000171109.1|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1 	ENSMUST00000046948.8|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1
mm10_v2_chr9_+_70542872_70542920	0.225867	Sox2	ENSMUST00000049263.7|Sltm|ENSMUSG00000032212.9|SAFB-like, transcription modulator
mm10_v2_chr6_+_51470510_51470530	0.225209	Sox2	ENSMUST00000031862.7|Cbx3|ENSMUSG00000029836.9|chromobox 3
mm10_v2_chr9_-_58313189_58313212	0.21864	Sox2	ENSMUST00000061799.8|Loxl1|ENSMUSG00000032334.9|lysyl oxidase-like 1
mm10_v2_chr5_-_149636331_149636376	0.215824	Sox2	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr11_+_43528759_43528796	0.20783	Sox2	ENSMUST00000050574.6|Ccnjl|ENSMUSG00000044707.7|cyclin J-like
mm10_v2_chr11_+_60699718_60699750	0.202947	Sox2	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr17_+_26414820_26414965	0.184345	Sox2	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr5_+_3543812_3543853	0.182184	Sox2	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr9_+_108569885_108569943	0.17984	Sox2	ENSMUST00000019183.8|Dalrd3|ENSMUSG00000019039.8|DALR anticodon binding domain containing 3
mm10_v2_chr12_+_19490308_19490308	0.178446	Sox2	ENSMUST00000167843.1|Gm6802|ENSMUSG00000059229.6|predicted gene 6802
mm10_v2_chr11_+_98203059_98203059	0.178216	Sox2	ENSMUST00000107539.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr4_+_155249960_155250010	0.17226	Sox2	ENSMUST00000178473.1|2610002J02Rik|ENSMUSG00000073684.7|RIKEN cDNA 2610002J02 gene 	ENSMUST00000105627.1|2610002J02Rik|ENSMUSG00000073684.7|RIKEN cDNA 2610002J02 gene 	ENSMUST00000097747.2|2610002J02Rik|ENSMUSG00000073684.7|RIKEN cDNA 2610002J02 gene
mm10_v2_chr2_-_28583239_28583279	0.154148	Sox2	ENSMUST00000028157.8|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
mm10_v2_chr4_-_148159571_148159649	0.145559	Sox2	ENSMUST00000167160.1|Fbxo44|ENSMUSG00000029001.9|F-box protein 44 	ENSMUST00000151246.1|Fbxo44|ENSMUSG00000029001.9|F-box protein 44
mm10_v2_chr10_-_127751707_127751737	0.14154	Sox2	ENSMUST00000079692.5|Gpr182|ENSMUSG00000058396.7|G protein-coupled receptor 182
mm10_v2_chr4_+_138217235_138217310	0.136272	Sox2	ENSMUST00000130071.1|Hp1bp3|ENSMUSG00000028759.7|heterochromatin protein 1, binding protein 3
mm10_v2_chr16_-_90284300_90284348	0.133894	Sox2	ENSMUST00000163419.1|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr4_-_132049058_132049156	0.13049	Sox2	ENSMUST00000105981.2|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000084253.3|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000141291.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr12_-_112674193_112674276	0.12916	Sox2	ENSMUST00000001780.3|Akt1|ENSMUSG00000001729.8|thymoma viral proto-oncogene 1
mm10_v2_chr17_-_71460395_71460395	0.125889	Sox2	ENSMUST00000180522.1|Gm4707|ENSMUSG00000091831.4|predicted gene 4707
mm10_v2_chr17_-_78684262_78684352	0.1109	Sox2	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr5_+_147430153_147430217	0.102219	Sox2	ENSMUST00000031651.8|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr17_-_25273366_25273383	0.0955664	Sox2	ENSMUST00000173084.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr8_+_33732237_33732339	0.0948615	Sox2	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr11_-_98400453_98400490	0.087371	Sox2	ENSMUST00000090827.5|Pgap3|ENSMUSG00000038208.7|post-GPI attachment to proteins 3
mm10_v2_chr1_-_180813591_180813632	0.0868729	Sox2	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr16_-_90284412_90284498	0.0867704	Sox2	ENSMUST00000039280.7|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr17_+_35220834_35220834	0.0730916	Sox2	ENSMUST00000118793.1|Gm16181|ENSMUSG00000081650.1|predicted gene 16181
mm10_v2_chr9_-_44735189_44735213	0.0726482	Sox2	ENSMUST00000034611.8|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr1_+_171411343_171411384	0.0590054	Sox2	ENSMUST00000160486.1|Usf1|ENSMUSG00000026641.7|upstream transcription factor 1
mm10_v2_chrX_-_64276937_64277002	0.0588254	Sox2	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr15_+_81872309_81872309	0.0572642	Sox2	ENSMUST00000023116.6|Aco2|ENSMUSG00000022477.6|aconitase 2, mitochondrial
mm10_v2_chr7_-_63938862_63938933	0.0571838	Sox2	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr15_-_82354280_82354291	0.0564534	Sox2	ENSMUST00000023085.5|Ndufa6|ENSMUSG00000022450.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm10_v2_chr5_+_115429944_115429997	0.0528557	Sox2	ENSMUST00000067168.5|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr19_-_3575708_3575756	0.0504765	Sox2	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr18_-_68300194_68300228	0.0475849	Sox2	ENSMUST00000152193.1|Fam210a|ENSMUSG00000038121.6|family with sequence similarity 210, member A
mm10_v2_chr15_+_102326116_102326152	0.0450592	Sox2	ENSMUST00000166658.1|Pfdn5|ENSMUSG00000001289.6|prefoldin 5 	ENSMUST00000062492.4|Pfdn5|ENSMUSG00000001289.6|prefoldin 5
mm10_v2_chr12_-_40248073_40248086	0.0411605	Sox2	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr11_+_20631956_20632006	0.0373554	Sox2	ENSMUST00000109586.2|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr9_-_66069702_66069741	0.0313232	Sox2	ENSMUST00000044711.5|Snx22|ENSMUSG00000039452.5|sorting nexin 22
mm10_v2_chr5_-_134456702_134456785	0.0148577	Sox2	ENSMUST00000073161.5|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000171794.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000111245.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100654.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000167084.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100652.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100650.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000074114.5|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
