mm10_v2_chr8_+_66386292_66386308	12.4099	Foxp2_Foxp3	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr8_-_84773381_84773427	5.80484	Foxp2_Foxp3	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr11_+_3332426_3332460	5.41982	Foxp2_Foxp3	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr4_+_144892813_144892835	5.31301	Foxp2_Foxp3	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr2_+_136713444_136713492	5.108	Foxp2_Foxp3	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr10_+_29211637_29211649	5.08501	Foxp2_Foxp3	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr18_+_69344503_69344530	4.65254	Foxp2_Foxp3	ENSMUST00000114985.3|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr10_+_60106452_60106468	4.5745	Foxp2_Foxp3	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr15_-_58214882_58214926	4.41624	Foxp2_Foxp3	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr4_+_144893077_144893103	4.35986	Foxp2_Foxp3	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr1_+_66386968_66386999	4.25941	Foxp2_Foxp3	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr6_-_148444336_148444389	4.25905	Foxp2_Foxp3	ENSMUST00000060095.8|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1 	ENSMUST00000100772.3|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1
mm10_v2_chr7_+_82175156_82175199	4.02716	Foxp2_Foxp3	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr19_+_4855129_4855269	3.95568	Foxp2_Foxp3	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr4_-_87806296_87806325	3.95011	Foxp2_Foxp3	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr4_+_144893127_144893151	3.76969	Foxp2_Foxp3	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr12_-_100725028_100725081	3.62117	Foxp2_Foxp3	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr2_+_28641227_28641262	3.51449	Foxp2_Foxp3	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr16_-_4880284_4880315	3.29323	Foxp2_Foxp3	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr13_-_93499803_93499825	3.26051	Foxp2_Foxp3	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr8_+_34807287_34807310	3.21703	Foxp2_Foxp3	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr11_+_69095217_69095289	3.19464	Foxp2_Foxp3	ENSMUST00000101004.2|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr14_-_93888732_93888732	2.99651	Foxp2_Foxp3	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr6_+_141524379_141524449	2.97494	Foxp2_Foxp3	ENSMUST00000032362.9|Slco1c1|ENSMUSG00000030235.11|solute carrier organic anion transporter family, member 1c1
mm10_v2_chr18_+_37489465_37489465	2.78609	Foxp2_Foxp3	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr14_+_61607455_61607482	2.78523	Foxp2_Foxp3	ENSMUST00000051184.8|Kcnrg|ENSMUSG00000046168.8|potassium channel regulator
mm10_v2_chr15_+_3270767_3271006	2.7467	Foxp2_Foxp3	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr15_+_25940846_25940934	2.67537	Foxp2_Foxp3	ENSMUST00000110438.1|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr2_-_65529275_65529404	2.62643	Foxp2_Foxp3	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr3_-_146770218_146770261	2.6186	Foxp2_Foxp3	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr18_+_37496997_37496997	2.58587	Foxp2_Foxp3	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr4_+_101507855_101507871	2.54286	Foxp2_Foxp3	ENSMUST00000038207.5|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr14_-_55116935_55116980	2.51178	Foxp2_Foxp3	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr2_-_7395879_7395912	2.50379	Foxp2_Foxp3	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr1_+_34005872_34005908	2.49249	Foxp2_Foxp3	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr2_-_73892530_73892555	2.47868	Foxp2_Foxp3	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr17_+_70522083_70522145	2.47794	Foxp2_Foxp3	ENSMUST00000148486.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1 	ENSMUST00000133717.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_-_100397740_100397792	2.45749	Foxp2_Foxp3	ENSMUST00000001592.8|Jup|ENSMUSG00000001552.8|junction plakoglobin 	ENSMUST00000107403.1|Jup|ENSMUSG00000001552.8|junction plakoglobin
mm10_v2_chr6_+_134830145_134830179	2.44957	Foxp2_Foxp3	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr1_+_179546303_179546370	2.42757	Foxp2_Foxp3	ENSMUST00000040706.8|Cnst|ENSMUSG00000038949.8|consortin, connexin sorting protein
mm10_v2_chr17_+_70561739_70561787	2.42236	Foxp2_Foxp3	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr4_+_101507947_101508032	2.3997	Foxp2_Foxp3	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr5_+_3928033_3928178	2.39406	Foxp2_Foxp3	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr19_-_37207293_37207508	2.3727	Foxp2_Foxp3	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr19_+_26750939_26750967	2.36963	Foxp2_Foxp3	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr11_-_101226414_101226463	2.36476	Foxp2_Foxp3	ENSMUST00000100417.2|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107285.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107284.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila)
mm10_v2_chr18_-_43393346_43393381	2.34473	Foxp2_Foxp3	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr9_-_40455670_40455777	2.30824	Foxp2_Foxp3	ENSMUST00000165104.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B 	ENSMUST00000045682.5|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr2_-_73892619_73892639	2.28885	Foxp2_Foxp3	ENSMUST00000112007.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112016.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr6_+_30541582_30541650	2.28515	Foxp2_Foxp3	ENSMUST00000096066.4|Cpa2|ENSMUSG00000071553.4|carboxypeptidase A2, pancreatic
mm10_v2_chr3_-_144202300_144202345	2.28142	Foxp2_Foxp3	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr9_-_77347816_77347887	2.26311	Foxp2_Foxp3	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr11_-_86993682_86993707	2.23797	Foxp2_Foxp3	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr2_-_73892588_73892616	2.23097	Foxp2_Foxp3	ENSMUST00000154456.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000090802.4|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000055833.5|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr11_-_121388186_121388267	2.22958	Foxp2_Foxp3	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr14_-_88471396_88471396	2.22813	Foxp2_Foxp3	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr14_+_64589802_64589848	2.22478	Foxp2_Foxp3	ENSMUST00000180610.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr9_-_77251829_77251838	2.22467	Foxp2_Foxp3	ENSMUST00000184322.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184316.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr17_+_55445375_55445389	2.22119	Foxp2_Foxp3	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr4_-_151108244_151108303	2.20733	Foxp2_Foxp3	ENSMUST00000131948.1|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chrX_+_163911401_163911439	2.14775	Foxp2_Foxp3	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr18_-_43059418_43059471	2.14686	Foxp2_Foxp3	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr8_+_19682268_19682270	2.14446	Foxp2_Foxp3	ENSMUST00000153710.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483 	ENSMUST00000127799.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483
mm10_v2_chr1_-_64956807_64956824	2.13963	Foxp2_Foxp3	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr10_+_84576626_84576626	2.13179	Foxp2_Foxp3	ENSMUST00000020223.7|Tcp11l2|ENSMUSG00000020034.7|t-complex 11 (mouse) like 2
mm10_v2_chr3_-_146781351_146781431	2.09836	Foxp2_Foxp3	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr10_+_69925954_69926133	2.0675	Foxp2_Foxp3	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_+_54438188_54438220	2.06666	Foxp2_Foxp3	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr9_-_112187766_112187862	2.05433	Foxp2_Foxp3	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr9_-_112187898_112187938	2.0521	Foxp2_Foxp3	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr14_+_55560480_55560533	2.05084	Foxp2_Foxp3	ENSMUST00000121622.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000143431.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000150481.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chrX_+_159840463_159840481	2.03575	Foxp2_Foxp3	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr11_+_78499087_78499123	2.01659	Foxp2_Foxp3	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr1_-_64956731_64956782	2.01409	Foxp2_Foxp3	ENSMUST00000123225.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr3_+_5218516_5218544	1.97518	Foxp2_Foxp3	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr12_+_35047180_35047230	1.93134	Foxp2_Foxp3	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr7_-_4844665_4844699	1.9013	Foxp2_Foxp3	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr3_+_138860489_138860506	1.89467	Foxp2_Foxp3	ENSMUST00000121826.1|Tspan5|ENSMUSG00000028152.4|tetraspanin 5
mm10_v2_chr1_-_179546261_179546276	1.88569	Foxp2_Foxp3	ENSMUST00000027769.5|Tfb2m|ENSMUSG00000026492.5|transcription factor B2, mitochondrial
mm10_v2_chr5_-_103211251_103211334	1.87715	Foxp2_Foxp3	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr16_+_20097554_20097596	1.86138	Foxp2_Foxp3	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr11_-_54860564_54860608	1.85564	Foxp2_Foxp3	ENSMUST00000144164.1|Lyrm7|ENSMUSG00000020268.7|LYR motif containing 7
mm10_v2_chr18_-_34624562_34624601	1.84808	Foxp2_Foxp3	ENSMUST00000003876.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115766.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000097626.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115765.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8
mm10_v2_chr7_+_16310412_16310455	1.84777	Foxp2_Foxp3	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr5_+_3928267_3928300	1.78497	Foxp2_Foxp3	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr17_+_35076902_35077073	1.77955	Foxp2_Foxp3	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr1_+_177444653_177444669	1.7678	Foxp2_Foxp3	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr19_+_23141183_23141263	1.75199	Foxp2_Foxp3	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr5_+_107437908_107437997	1.75149	Foxp2_Foxp3	ENSMUST00000094541.2|Btbd8|ENSMUSG00000070632.3|BTB (POZ) domain containing 8
mm10_v2_chr16_-_97170707_97170759	1.74696	Foxp2_Foxp3	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr9_-_77347787_77347815	1.73475	Foxp2_Foxp3	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr5_+_81021202_81021241	1.71769	Foxp2_Foxp3	ENSMUST00000117253.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3 	ENSMUST00000120128.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr3_+_52268337_52268388	1.71532	Foxp2_Foxp3	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr17_+_70522149_70522169	1.70254	Foxp2_Foxp3	ENSMUST00000140728.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr7_-_44849075_44849075	1.69422	Foxp2_Foxp3	ENSMUST00000047085.8|Tbc1d17|ENSMUSG00000038520.8|TBC1 domain family, member 17
mm10_v2_chr1_+_9601163_9601256	1.67859	Foxp2_Foxp3	ENSMUST00000088666.3|3110035E14Rik|ENSMUSG00000067879.3|RIKEN cDNA 3110035E14 gene
mm10_v2_chr13_+_76579670_76579678	1.67402	Foxp2_Foxp3	ENSMUST00000126960.1|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1 	ENSMUST00000109583.2|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1
mm10_v2_chr2_+_32095518_32095595	1.66304	Foxp2_Foxp3	ENSMUST00000057423.5|Ppapdc3|ENSMUSG00000051373.5|phosphatidic acid phosphatase type 2 domain containing 3
mm10_v2_chr19_-_42086338_42086375	1.6628	Foxp2_Foxp3	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr14_-_55560340_55560406	1.66085	Foxp2_Foxp3	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr18_-_43373248_43373272	1.65444	Foxp2_Foxp3	ENSMUST00000118043.1|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr16_-_74411292_74411430	1.64335	Foxp2_Foxp3	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr3_+_109573907_109573990	1.63664	Foxp2_Foxp3	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr8_-_84978709_84978748	1.61765	Foxp2_Foxp3	ENSMUST00000064922.5|Junb|ENSMUSG00000052837.5|Jun-B oncogene
mm10_v2_chr1_+_51289106_51289142	1.61088	Foxp2_Foxp3	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr3_+_65109343_65109420	1.60617	Foxp2_Foxp3	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr10_+_79716588_79716666	1.57549	Foxp2_Foxp3	ENSMUST00000099513.1|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2 	ENSMUST00000020581.2|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2
mm10_v2_chr10_-_18234930_18235008	1.55462	Foxp2_Foxp3	ENSMUST00000052648.8|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000080860.6|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000173243.1|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A
mm10_v2_chr9_-_45955170_45955186	1.5508	Foxp2_Foxp3	ENSMUST00000162072.1|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr14_+_55560904_55560974	1.54882	Foxp2_Foxp3	ENSMUST00000072530.4|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000128490.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chrX_+_68678541_68678554	1.54263	Foxp2_Foxp3	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr16_-_34263179_34263208	1.52786	Foxp2_Foxp3	ENSMUST00000114949.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114954.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr9_+_78113275_78113346	1.52303	Foxp2_Foxp3	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chrX_+_68678624_68678639	1.52092	Foxp2_Foxp3	ENSMUST00000114656.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr18_+_37504264_37504296	1.5074	Foxp2_Foxp3	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chr1_-_180195981_180196075	1.50605	Foxp2_Foxp3	ENSMUST00000027766.6|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000161814.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr2_+_112265809_112265858	1.50144	Foxp2_Foxp3	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr14_-_29721835_29721886	1.49703	Foxp2_Foxp3	ENSMUST00000022567.7|Cacna2d3|ENSMUSG00000021991.7|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm10_v2_chr2_+_68117713_68117713	1.48495	Foxp2_Foxp3	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr10_+_123264076_123264125	1.47827	Foxp2_Foxp3	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr8_+_20136455_20136574	1.47175	Foxp2_Foxp3	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr7_+_19291070_19291124	1.46795	Foxp2_Foxp3	ENSMUST00000108468.3|Rtn2|ENSMUSG00000030401.9|reticulon 2 (Z-band associated protein)
mm10_v2_chr19_-_28010995_28011054	1.46172	Foxp2_Foxp3	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr12_+_52699297_52699411	1.46115	Foxp2_Foxp3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr19_+_26623419_26623471	1.45978	Foxp2_Foxp3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr6_-_136875794_136875811	1.45801	Foxp2_Foxp3	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr19_-_34255325_34255342	1.45562	Foxp2_Foxp3	ENSMUST00000039631.8|Acta2|ENSMUSG00000035783.8|actin, alpha 2, smooth muscle, aorta
mm10_v2_chr13_+_104178797_104178872	1.45468	Foxp2_Foxp3	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr18_+_69593361_69593450	1.45335	Foxp2_Foxp3	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr12_-_72236692_72236724	1.4475	Foxp2_Foxp3	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr11_+_32000452_32000470	1.44094	Foxp2_Foxp3	ENSMUST00000020537.2|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2 	ENSMUST00000109409.1|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2
mm10_v2_chr4_-_87806276_87806294	1.4396	Foxp2_Foxp3	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr2_+_112284561_112284610	1.42969	Foxp2_Foxp3	ENSMUST00000053666.7|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr6_-_137169710_137169732	1.42727	Foxp2_Foxp3	ENSMUST00000117919.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr1_-_64121389_64121452	1.42514	Foxp2_Foxp3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr4_-_53159885_53159900	1.42459	Foxp2_Foxp3	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr4_-_129121889_129122063	1.41074	Foxp2_Foxp3	ENSMUST00000139450.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000125931.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000116444.2|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr11_+_70214105_70214132	1.37947	Foxp2_Foxp3	ENSMUST00000094055.3|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000136328.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000126296.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000153993.2|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm10_v2_chr9_+_87015537_87015537	1.36735	Foxp2_Foxp3	ENSMUST00000058846.4|Ripply2|ENSMUSG00000047897.4|ripply2 homolog (zebrafish)
mm10_v2_chr1_-_64121456_64121491	1.35583	Foxp2_Foxp3	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr3_+_5218546_5218561	1.34778	Foxp2_Foxp3	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr7_+_19359740_19359770	1.34617	Foxp2_Foxp3	ENSMUST00000140836.1|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr12_-_85270564_85270608	1.34027	Foxp2_Foxp3	ENSMUST00000019378.6|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli) 	ENSMUST00000166821.1|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli)
mm10_v2_chr13_+_80886095_80886201	1.33711	Foxp2_Foxp3	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr1_-_54926311_54926402	1.32984	Foxp2_Foxp3	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr11_+_3330781_3330812	1.325	Foxp2_Foxp3	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_+_55437100_55437182	1.32032	Foxp2_Foxp3	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr13_+_29016267_29016303	1.32004	Foxp2_Foxp3	ENSMUST00000140415.1|A330102I10Rik|ENSMUSG00000086363.1|RIKEN cDNA A330102I10 gene
mm10_v2_chr18_+_36952621_36952766	1.319	Foxp2_Foxp3	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr15_-_66969616_66969647	1.31271	Foxp2_Foxp3	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr10_+_69534208_69534222	1.31252	Foxp2_Foxp3	ENSMUST00000182439.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092434.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092432.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092431.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000054167.8|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000047061.6|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_+_44849216_44849295	1.30431	Foxp2_Foxp3	ENSMUST00000054343.8|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr7_+_113207465_113207595	1.30235	Foxp2_Foxp3	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr7_-_12422488_12422488	1.29756	Foxp2_Foxp3	ENSMUST00000120220.1|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr18_-_37020679_37020679	1.29692	Foxp2_Foxp3	ENSMUST00000097612.2|Gm10545|ENSMUSG00000073594.2|predicted gene 10545
mm10_v2_chr2_+_3770673_3770708	1.28205	Foxp2_Foxp3	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr11_+_17051818_17051899	1.27373	Foxp2_Foxp3	ENSMUST00000058159.5|Cnrip1|ENSMUSG00000044629.5|cannabinoid receptor interacting protein 1
mm10_v2_chr1_-_132367879_132367894	1.27351	Foxp2_Foxp3	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chrX_+_7722214_7722260	1.24539	Foxp2_Foxp3	ENSMUST00000043045.2|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116634.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115689.3|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000131077.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115688.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116633.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr2_-_52558539_52558571	1.24276	Foxp2_Foxp3	ENSMUST00000102760.3|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit 	ENSMUST00000102761.2|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr7_+_141476374_141476400	1.23382	Foxp2_Foxp3	ENSMUST00000117634.1|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr15_+_92597104_92597121	1.23365	Foxp2_Foxp3	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr7_+_44849581_44849629	1.22803	Foxp2_Foxp3	ENSMUST00000150335.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich) 	ENSMUST00000107882.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr13_-_51701041_51701041	1.22568	Foxp2_Foxp3	ENSMUST00000110042.1|Gm15440|ENSMUSG00000051107.4|predicted gene 15440
mm10_v2_chr10_+_39420009_39420074	1.22158	Foxp2_Foxp3	ENSMUST00000157009.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr9_+_53850243_53850257	1.21949	Foxp2_Foxp3	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr11_-_102556122_102556199	1.21666	Foxp2_Foxp3	ENSMUST00000143842.1|Gpatch8|ENSMUSG00000034621.8|G patch domain containing 8
mm10_v2_chr6_-_13677930_13677974	1.21544	Foxp2_Foxp3	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chrX_+_35888808_35888859	1.21002	Foxp2_Foxp3	ENSMUST00000033419.6|Dock11|ENSMUSG00000031093.8|dedicator of cytokinesis 11
mm10_v2_chr1_-_133753681_133753857	1.2091	Foxp2_Foxp3	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr8_+_20567716_20567716	1.20327	Foxp2_Foxp3	ENSMUST00000178995.1|Gm21092|ENSMUSG00000095403.1|predicted gene, 21092
mm10_v2_chr17_+_3532554_3532554	1.17798	Foxp2_Foxp3	ENSMUST00000168560.1|Cldn20|ENSMUSG00000091530.1|claudin 20
mm10_v2_chr13_+_37345338_37345365	1.17772	Foxp2_Foxp3	ENSMUST00000021860.5|Ly86|ENSMUSG00000021423.5|lymphocyte antigen 86
mm10_v2_chr2_-_66440753_66440846	1.17557	Foxp2_Foxp3	ENSMUST00000112371.2|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha 	ENSMUST00000138910.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr2_-_64975762_64975795	1.17126	Foxp2_Foxp3	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr7_+_16309577_16309641	1.16197	Foxp2_Foxp3	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr4_+_43384332_43384350	1.15133	Foxp2_Foxp3	ENSMUST00000136360.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr3_-_123690806_123690847	1.14722	Foxp2_Foxp3	ENSMUST00000154668.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr3_+_5218589_5218614	1.14697	Foxp2_Foxp3	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr6_-_134897815_134897925	1.14308	Foxp2_Foxp3	ENSMUST00000165392.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000046255.7|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000111932.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000116515.2|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19
mm10_v2_chr18_+_37447641_37447674	1.14209	Foxp2_Foxp3	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr15_+_5185700_5185742	1.14202	Foxp2_Foxp3	ENSMUST00000081640.5|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33
mm10_v2_chr11_-_42000532_42000592	1.14053	Foxp2_Foxp3	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr3_+_118430299_118430368	1.13964	Foxp2_Foxp3	ENSMUST00000180774.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr13_-_52929640_52929681	1.13279	Foxp2_Foxp3	ENSMUST00000120535.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000119311.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000021913.9|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000110031.3|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr16_-_35769356_35769384	1.13078	Foxp2_Foxp3	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr2_-_77519565_77519647	1.12821	Foxp2_Foxp3	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr11_+_116434087_116434106	1.1181	Foxp2_Foxp3	ENSMUST00000057676.6|Ubald2|ENSMUSG00000050628.6|UBA-like domain containing 2
mm10_v2_chr16_-_92400067_92400083	1.11719	Foxp2_Foxp3	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr4_-_45012287_45012412	1.11652	Foxp2_Foxp3	ENSMUST00000055028.8|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000180217.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000107817.2|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr8_-_3279606_3279622	1.10237	Foxp2_Foxp3	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr19_+_38264761_38264831	1.09994	Foxp2_Foxp3	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr10_+_21882184_21882239	1.09852	Foxp2_Foxp3	ENSMUST00000120509.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr9_-_77347889_77347916	1.08983	Foxp2_Foxp3	ENSMUST00000185039.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr6_+_17491216_17491242	1.07853	Foxp2_Foxp3	ENSMUST00000080469.5|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr11_+_75531690_75531743	1.07393	Foxp2_Foxp3	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr7_+_66839726_66839750	1.06816	Foxp2_Foxp3	ENSMUST00000098382.3|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr2_-_7396192_7396241	1.065	Foxp2_Foxp3	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr19_+_44992127_44992136	1.05637	Foxp2_Foxp3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr4_+_85205120_85205131	1.05611	Foxp2_Foxp3	ENSMUST00000107188.3|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr13_+_16014457_16014475	1.04747	Foxp2_Foxp3	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr12_+_95695350_95695365	1.04526	Foxp2_Foxp3	ENSMUST00000110117.1|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr1_+_57377593_57377689	1.04403	Foxp2_Foxp3	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr11_+_98741871_98741894	1.04294	Foxp2_Foxp3	ENSMUST00000103139.4|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr7_-_12422751_12422751	1.03802	Foxp2_Foxp3	ENSMUST00000080348.5|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr17_+_35077080_35077155	1.03746	Foxp2_Foxp3	ENSMUST00000172959.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr13_-_52929458_52929497	1.03632	Foxp2_Foxp3	ENSMUST00000123599.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chrX_-_43167817_43167838	1.03203	Foxp2_Foxp3	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr19_-_28963863_28963908	1.03021	Foxp2_Foxp3	ENSMUST00000161813.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr16_-_34262945_34262972	1.03019	Foxp2_Foxp3	ENSMUST00000114953.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr14_+_55561060_55561071	1.03001	Foxp2_Foxp3	ENSMUST00000117701.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr13_+_60602182_60602231	1.02493	Foxp2_Foxp3	ENSMUST00000044083.7|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chrX_-_7740206_7740218	1.02397	Foxp2_Foxp3	ENSMUST00000128289.1|Ccdc120|ENSMUSG00000031150.6|coiled-coil domain containing 120
mm10_v2_chr9_-_45955226_45955250	1.02093	Foxp2_Foxp3	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr19_+_42090422_42090502	1.01958	Foxp2_Foxp3	ENSMUST00000066778.4|Pi4k2a|ENSMUSG00000025178.8|phosphatidylinositol 4-kinase type 2 alpha
mm10_v2_chr16_+_43510267_43510308	1.0059	Foxp2_Foxp3	ENSMUST00000114695.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr10_+_39732099_39732140	1.00224	Foxp2_Foxp3	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr2_+_124610573_124610613	0.999641	Foxp2_Foxp3	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr19_-_28011138_28011181	0.997962	Foxp2_Foxp3	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr7_-_142372210_142372292	0.997365	Foxp2_Foxp3	ENSMUST00000084412.5|Ifitm10|ENSMUSG00000045777.8|interferon induced transmembrane protein 10
mm10_v2_chr16_+_94425083_94425148	0.997108	Foxp2_Foxp3	ENSMUST00000141176.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr6_-_137571007_137571032	0.995223	Foxp2_Foxp3	ENSMUST00000100841.2|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr4_-_118409219_118409282	0.993051	Foxp2_Foxp3	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr4_-_45012093_45012159	0.991573	Foxp2_Foxp3	ENSMUST00000131991.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr11_+_77765588_77765643	0.989462	Foxp2_Foxp3	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr11_+_3330401_3330541	0.984077	Foxp2_Foxp3	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_-_73312701_73312724	0.983117	Foxp2_Foxp3	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr13_+_55209776_55209788	0.982245	Foxp2_Foxp3	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr7_+_130577334_130577484	0.977347	Foxp2_Foxp3	ENSMUST00000059145.7|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2 	ENSMUST00000084513.4|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr10_+_69534039_69534070	0.968085	Foxp2_Foxp3	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_+_130692532_130692575	0.967157	Foxp2_Foxp3	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr12_-_99393010_99393090	0.962508	Foxp2_Foxp3	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr10_-_117282262_117282280	0.953775	Foxp2_Foxp3	ENSMUST00000092163.7|Lyz2|ENSMUSG00000069516.7|lysozyme 2
mm10_v2_chrX_+_7722267_7722362	0.951158	Foxp2_Foxp3	ENSMUST00000125991.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000148624.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr7_+_24907618_24907647	0.947211	Foxp2_Foxp3	ENSMUST00000151121.1|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr13_-_98815408_98815449	0.946875	Foxp2_Foxp3	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr9_-_103230415_103230444	0.944507	Foxp2_Foxp3	ENSMUST00000035158.9|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr8_-_69887687_69887687	0.943352	Foxp2_Foxp3	ENSMUST00000057831.7|Cilp2|ENSMUSG00000044006.8|cartilage intermediate layer protein 2
mm10_v2_chr4_+_114680769_114680804	0.936683	Foxp2_Foxp3	ENSMUST00000146346.1|Gm12829|ENSMUSG00000085870.1|predicted gene 12829
mm10_v2_chr9_-_77251871_77251880	0.930152	Foxp2_Foxp3	ENSMUST00000183955.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr15_+_61985540_61985622	0.929329	Foxp2_Foxp3	ENSMUST00000159327.1|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene 	ENSMUST00000167731.1|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene
mm10_v2_chr11_+_85353156_85353219	0.927096	Foxp2_Foxp3	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chr5_-_148392810_148392816	0.925268	Foxp2_Foxp3	ENSMUST00000138257.1|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr18_+_37742088_37742137	0.915314	Foxp2_Foxp3	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr10_-_82690608_82690650	0.911699	Foxp2_Foxp3	ENSMUST00000065815.6|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2 	ENSMUST00000020485.3|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2
mm10_v2_chr2_-_104712122_104712180	0.910556	Foxp2_Foxp3	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr12_-_84450944_84451018	0.909741	Foxp2_Foxp3	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chrX_+_94234921_94234972	0.904933	Foxp2_Foxp3	ENSMUST00000113908.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113916.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr2_+_176236860_176236860	0.90066	Foxp2_Foxp3	ENSMUST00000166464.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr5_+_14025305_14025327	0.896111	Foxp2_Foxp3	ENSMUST00000073957.6|Sema3e|ENSMUSG00000063531.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm10_v2_chr12_-_86884808_86884842	0.892566	Foxp2_Foxp3	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr5_-_99252839_99252927	0.890485	Foxp2_Foxp3	ENSMUST00000168092.1|Rasgef1b|ENSMUSG00000029333.8|RasGEF domain family, member 1B 	ENSMUST00000031276.8|Rasgef1b|ENSMUSG00000029333.8|RasGEF domain family, member 1B
mm10_v2_chr8_+_23669653_23669671	0.888876	Foxp2_Foxp3	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr11_+_53567361_53567526	0.887656	Foxp2_Foxp3	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr4_+_136357423_136357541	0.885966	Foxp2_Foxp3	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr18_+_77938452_77938477	0.877943	Foxp2_Foxp3	ENSMUST00000044622.5|Epg5|ENSMUSG00000039840.7|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm10_v2_chr10_-_49783259_49783582	0.874974	Foxp2_Foxp3	ENSMUST00000105484.3|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105486.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000079751.2|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105485.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr1_+_180101144_180101144	0.874381	Foxp2_Foxp3	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr1_-_128592284_128592307	0.873419	Foxp2_Foxp3	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chrX_+_68678712_68678817	0.87337	Foxp2_Foxp3	ENSMUST00000114654.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114655.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114657.2|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114653.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr11_+_43433720_43433783	0.86894	Foxp2_Foxp3	ENSMUST00000126128.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000151880.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000020681.3|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae)
mm10_v2_chr1_-_134955908_134955955	0.868603	Foxp2_Foxp3	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chrX_+_94234594_94234604	0.866282	Foxp2_Foxp3	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr3_+_7366598_7366641	0.865226	Foxp2_Foxp3	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr2_+_69722797_69722840	0.864506	Foxp2_Foxp3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr14_-_55106547_55106594	0.861486	Foxp2_Foxp3	ENSMUST00000036041.8|Ap1g2|ENSMUSG00000040701.9|adaptor protein complex AP-1, gamma 2 subunit
mm10_v2_chr5_-_142817387_142817420	0.852929	Foxp2_Foxp3	ENSMUST00000036253.6|Tnrc18|ENSMUSG00000039477.10|trinucleotide repeat containing 18
mm10_v2_chr3_+_68584154_68584181	0.845392	Foxp2_Foxp3	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr12_+_4133394_4133411	0.84063	Foxp2_Foxp3	ENSMUST00000152065.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3 	ENSMUST00000127756.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3
mm10_v2_chr19_-_57182293_57182315	0.835181	Foxp2_Foxp3	ENSMUST00000133369.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr8_+_25911670_25911692	0.832209	Foxp2_Foxp3	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr7_-_25390098_25390124	0.827243	Foxp2_Foxp3	ENSMUST00000054301.7|Lipe|ENSMUSG00000003123.9|lipase, hormone sensitive
mm10_v2_chr9_-_99358518_99358552	0.826811	Foxp2_Foxp3	ENSMUST00000042158.6|Esyt3|ENSMUSG00000037681.7|extended synaptotagmin-like protein 3
mm10_v2_chr11_-_95699143_95699143	0.824833	Foxp2_Foxp3	ENSMUST00000062249.2|Gm9796|ENSMUSG00000045075.2|predicted gene 9796
mm10_v2_chr15_+_5185519_5185560	0.822193	Foxp2_Foxp3	ENSMUST00000118193.1|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33 	ENSMUST00000022751.8|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33
mm10_v2_chr13_-_12464925_12464949	0.819252	Foxp2_Foxp3	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr3_+_51559757_51559781	0.817497	Foxp2_Foxp3	ENSMUST00000180616.1|5031434O11Rik|ENSMUSG00000097885.1|RIKEN cDNA 5031434O11 gene
mm10_v2_chr3_-_144205165_144205220	0.813903	Foxp2_Foxp3	ENSMUST00000120539.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr6_-_106800051_106800095	0.808556	Foxp2_Foxp3	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr6_-_88874045_88874070	0.804975	Foxp2_Foxp3	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr15_+_4375462_4375511	0.789459	Foxp2_Foxp3	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr11_+_16257706_16257808	0.786825	Foxp2_Foxp3	ENSMUST00000109645.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A 	ENSMUST00000109647.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A
mm10_v2_chr9_-_102354685_102354699	0.783252	Foxp2_Foxp3	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr4_+_97777606_97777632	0.777939	Foxp2_Foxp3	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr15_+_89059712_89059760	0.776134	Foxp2_Foxp3	ENSMUST00000161372.1|Panx2|ENSMUSG00000058441.7|pannexin 2 	ENSMUST00000162424.1|Panx2|ENSMUSG00000058441.7|pannexin 2
mm10_v2_chr4_+_97772734_97772848	0.775735	Foxp2_Foxp3	ENSMUST00000152023.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr2_-_114201416_114201469	0.774038	Foxp2_Foxp3	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr7_+_126776939_126777213	0.772268	Foxp2_Foxp3	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr5_-_34187670_34187749	0.769032	Foxp2_Foxp3	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr2_-_102400863_102400970	0.766727	Foxp2_Foxp3	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr8_+_64947177_64947255	0.765652	Foxp2_Foxp3	ENSMUST00000079896.7|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192 	ENSMUST00000026595.5|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192
mm10_v2_chr10_-_33624587_33624769	0.757925	Foxp2_Foxp3	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr18_+_51117754_51117898	0.757763	Foxp2_Foxp3	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr1_+_66364623_66364663	0.756746	Foxp2_Foxp3	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr8_-_64205970_64206011	0.756172	Foxp2_Foxp3	ENSMUST00000066166.4|Tll1|ENSMUSG00000053626.4|tolloid-like
mm10_v2_chr4_+_43669610_43669678	0.754139	Foxp2_Foxp3	ENSMUST00000107866.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr6_-_87809757_87809787	0.75367	Foxp2_Foxp3	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr10_+_116177351_116177417	0.751006	Foxp2_Foxp3	ENSMUST00000155606.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R 	ENSMUST00000128399.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr6_+_134830216_134830270	0.749102	Foxp2_Foxp3	ENSMUST00000111937.1|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr12_+_74297474_74297474	0.748506	Foxp2_Foxp3	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chr4_-_59549243_59549303	0.743212	Foxp2_Foxp3	ENSMUST00000173699.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000173884.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000102883.4|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000174586.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr5_-_142817654_142817668	0.741815	Foxp2_Foxp3	ENSMUST00000151477.1|Tnrc18|ENSMUSG00000039477.10|trinucleotide repeat containing 18
mm10_v2_chr2_-_20943413_20943424	0.735767	Foxp2_Foxp3	ENSMUST00000140230.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr16_+_43235856_43235880	0.727398	Foxp2_Foxp3	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr1_+_75549581_75549626	0.716593	Foxp2_Foxp3	ENSMUST00000154101.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr2_-_45110336_45110487	0.716011	Foxp2_Foxp3	ENSMUST00000028229.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000152232.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr2_-_181578906_181578952	0.713968	Foxp2_Foxp3	ENSMUST00000136875.1|Uckl1|ENSMUSG00000089917.1|uridine-cytidine kinase 1-like 1
mm10_v2_chr7_+_44848991_44849114	0.713875	Foxp2_Foxp3	ENSMUST00000107885.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr7_-_29906087_29906137	0.708279	Foxp2_Foxp3	ENSMUST00000053521.8|Zfp27|ENSMUSG00000062040.8|zinc finger protein 27
mm10_v2_chr13_+_63282142_63282142	0.706103	Foxp2_Foxp3	ENSMUST00000159152.1|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr4_-_14621805_14621819	0.704986	Foxp2_Foxp3	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr11_-_106789157_106789192	0.701763	Foxp2_Foxp3	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr15_+_78430086_78430127	0.700461	Foxp2_Foxp3	ENSMUST00000162808.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr5_+_21372642_21372714	0.694363	Foxp2_Foxp3	ENSMUST00000035799.5|Fgl2|ENSMUSG00000039899.5|fibrinogen-like protein 2
mm10_v2_chr18_+_31609512_31609512	0.694143	Foxp2_Foxp3	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr19_+_8741669_8741811	0.692657	Foxp2_Foxp3	ENSMUST00000176314.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000073430.7|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000175901.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr12_+_77238093_77238122	0.689686	Foxp2_Foxp3	ENSMUST00000177595.1|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8 	ENSMUST00000171770.2|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr15_+_61985377_61985397	0.688356	Foxp2_Foxp3	ENSMUST00000161976.1|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene 	ENSMUST00000022971.7|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene
mm10_v2_chr4_+_148602527_148602583	0.687123	Foxp2_Foxp3	ENSMUST00000105701.2|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2 	ENSMUST00000052060.6|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2
mm10_v2_chrX_+_101376359_101376378	0.685978	Foxp2_Foxp3	ENSMUST00000119080.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr12_+_69296676_69296798	0.674064	Foxp2_Foxp3	ENSMUST00000021362.4|Klhdc2|ENSMUSG00000020978.4|kelch domain containing 2
mm10_v2_chr2_+_154613297_154613370	0.665926	Foxp2_Foxp3	ENSMUST00000081926.6|Zfp341|ENSMUSG00000059842.6|zinc finger protein 341 	ENSMUST00000109702.1|Zfp341|ENSMUSG00000059842.6|zinc finger protein 341
mm10_v2_chr4_-_154160632_154160696	0.663851	Foxp2_Foxp3	ENSMUST00000105639.3|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like 	ENSMUST00000030896.8|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like
mm10_v2_chr9_+_44398176_44398176	0.658313	Foxp2_Foxp3	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr4_-_117887279_117887290	0.657283	Foxp2_Foxp3	ENSMUST00000132073.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B
mm10_v2_chr12_+_73584788_73584810	0.657035	Foxp2_Foxp3	ENSMUST00000021527.8|Prkch|ENSMUSG00000021108.11|protein kinase C, eta
mm10_v2_chr18_+_5593566_5593602	0.65453	Foxp2_Foxp3	ENSMUST00000160910.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr11_+_102836296_102836458	0.65301	Foxp2_Foxp3	ENSMUST00000021302.8|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B 	ENSMUST00000107072.1|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B
mm10_v2_chr7_+_105375053_105375098	0.651825	Foxp2_Foxp3	ENSMUST00000106805.2|Gm5901|ENSMUSG00000078611.2|predicted gene 5901
mm10_v2_chr4_+_48663502_48663525	0.63546	Foxp2_Foxp3	ENSMUST00000030033.4|Murc|ENSMUSG00000028348.7|muscle-related coiled-coil protein
mm10_v2_chr3_+_38886940_38886940	0.633904	Foxp2_Foxp3	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr2_+_19658055_19658072	0.633384	Foxp2_Foxp3	ENSMUST00000052168.4|Otud1|ENSMUSG00000043415.4|OTU domain containing 1
mm10_v2_chr3_+_32436376_32436376	0.631571	Foxp2_Foxp3	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr12_+_3365108_3365142	0.629738	Foxp2_Foxp3	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr1_+_75142775_75142797	0.624691	Foxp2_Foxp3	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr1_+_36511867_36511903	0.622142	Foxp2_Foxp3	ENSMUST00000001166.7|Cnnm3|ENSMUSG00000001138.7|cyclin M3 	ENSMUST00000097776.3|Cnnm3|ENSMUSG00000001138.7|cyclin M3
mm10_v2_chr4_-_35845204_35845204	0.616814	Foxp2_Foxp3	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr11_-_107348130_107348179	0.61224	Foxp2_Foxp3	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr9_-_45954966_45954987	0.609281	Foxp2_Foxp3	ENSMUST00000114573.2|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr11_-_106788845_106788883	0.601472	Foxp2_Foxp3	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr6_+_51432663_51432674	0.595769	Foxp2_Foxp3	ENSMUST00000005103.5|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chr7_+_30291941_30291968	0.594188	Foxp2_Foxp3	ENSMUST00000144508.1|Clip3|ENSMUSG00000013921.8|CAP-GLY domain containing linker protein 3
mm10_v2_chr12_-_15816762_15816881	0.594164	Foxp2_Foxp3	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr3_+_136670076_136670186	0.586925	Foxp2_Foxp3	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr10_-_105574435_105574451	0.58117	Foxp2_Foxp3	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr3_+_51693771_51693771	0.579545	Foxp2_Foxp3	ENSMUST00000099104.2|Gm10729|ENSMUSG00000074603.2|predicted gene 10729
mm10_v2_chr5_+_31048627_31048785	0.578432	Foxp2_Foxp3	ENSMUST00000013766.6|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000173215.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000153643.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000114659.2|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor
mm10_v2_chr4_-_117887292_117887353	0.576889	Foxp2_Foxp3	ENSMUST00000150204.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000147845.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000036380.7|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000136596.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B
mm10_v2_chr1_+_34121250_34121288	0.576392	Foxp2_Foxp3	ENSMUST00000183006.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr12_+_71136848_71136848	0.57027	Foxp2_Foxp3	ENSMUST00000149564.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene 	ENSMUST00000045907.8|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr2_-_170194033_170194064	0.566655	Foxp2_Foxp3	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr5_-_96164147_96164201	0.560419	Foxp2_Foxp3	ENSMUST00000137207.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr9_-_44802951_44802961	0.559983	Foxp2_Foxp3	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr1_+_60181495_60181591	0.559207	Foxp2_Foxp3	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr2_+_69723071_69723093	0.555876	Foxp2_Foxp3	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr5_+_122643878_122644009	0.553833	Foxp2_Foxp3	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr5_-_146220901_146220987	0.551486	Foxp2_Foxp3	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr19_-_43674844_43674909	0.550623	Foxp2_Foxp3	ENSMUST00000046038.7|Slc25a28|ENSMUSG00000040414.7|solute carrier family 25, member 28
mm10_v2_chr16_+_43364145_43364204	0.548139	Foxp2_Foxp3	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr3_+_96557950_96557968	0.544501	Foxp2_Foxp3	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr6_+_29853746_29853790	0.543224	Foxp2_Foxp3	ENSMUST00000064872.6|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000152581.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000176265.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000154079.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr17_-_29716969_29717028	0.542317	Foxp2_Foxp3	ENSMUST00000129091.1|Ccdc167|ENSMUSG00000024018.11|coiled-coil domain containing 167 	ENSMUST00000128751.1|Ccdc167|ENSMUSG00000024018.11|coiled-coil domain containing 167
mm10_v2_chr18_+_65698253_65698277	0.540646	Foxp2_Foxp3	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr11_-_54956047_54956122	0.540269	Foxp2_Foxp3	ENSMUST00000155316.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000108889.3|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000126703.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1
mm10_v2_chr3_-_30793549_30793595	0.53715	Foxp2_Foxp3	ENSMUST00000180833.1|4933429H19Rik|ENSMUSG00000097786.1|RIKEN cDNA 4933429H19 gene
mm10_v2_chr18_+_37333853_37333946	0.535847	Foxp2_Foxp3	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chrX_-_164980279_164980309	0.534669	Foxp2_Foxp3	ENSMUST00000112247.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chrX_+_38600626_38600691	0.534197	Foxp2_Foxp3	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr6_+_124304646_124304671	0.531486	Foxp2_Foxp3	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chrX_-_164980310_164980375	0.519216	Foxp2_Foxp3	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr2_-_60125651_60125775	0.515596	Foxp2_Foxp3	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr14_-_18239053_18239127	0.501403	Foxp2_Foxp3	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr6_+_92940572_92940592	0.496226	Foxp2_Foxp3	ENSMUST00000181145.1|9530026P05Rik|ENSMUSG00000097462.1|RIKEN cDNA 9530026P05 gene 	ENSMUST00000181840.1|9530026P05Rik|ENSMUSG00000097462.1|RIKEN cDNA 9530026P05 gene
mm10_v2_chr8_-_121944886_121944908	0.491909	Foxp2_Foxp3	ENSMUST00000057653.7|Car5a|ENSMUSG00000025317.7|carbonic anhydrase 5a, mitochondrial
mm10_v2_chr18_-_12121460_12121492	0.49072	Foxp2_Foxp3	ENSMUST00000055447.6|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000050228.7|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000092075.4|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241
mm10_v2_chrX_+_169685191_169685250	0.488396	Foxp2_Foxp3	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr10_-_26373956_26374088	0.488311	Foxp2_Foxp3	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr5_+_25246775_25246802	0.478387	Foxp2_Foxp3	ENSMUST00000144971.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr6_+_51432678_51432784	0.477666	Foxp2_Foxp3	ENSMUST00000160133.1|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chr1_-_180245757_180245911	0.472913	Foxp2_Foxp3	ENSMUST00000111104.1|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr13_+_46669517_46669545	0.472858	Foxp2_Foxp3	ENSMUST00000099547.3|C78339|ENSMUSG00000069237.8|expressed sequence C78339
mm10_v2_chr8_+_58912257_58912257	0.468496	Foxp2_Foxp3	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr3_+_129532386_129532440	0.467059	Foxp2_Foxp3	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr11_+_106789235_106789335	0.467055	Foxp2_Foxp3	ENSMUST00000103068.3|Cep95|ENSMUSG00000018372.7|centrosomal protein 95 	ENSMUST00000018516.4|Cep95|ENSMUSG00000018372.7|centrosomal protein 95
mm10_v2_chrX_+_103356464_103356488	0.465176	Foxp2_Foxp3	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr11_-_50210765_50210827	0.461479	Foxp2_Foxp3	ENSMUST00000143379.1|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000015981.5|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000102774.4|Sqstm1|ENSMUSG00000015837.9|sequestosome 1
mm10_v2_chr5_-_31048014_31048079	0.461349	Foxp2_Foxp3	ENSMUST00000137223.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chr5_+_25247344_25247363	0.460655	Foxp2_Foxp3	ENSMUST00000114950.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr11_-_107470699_107470726	0.459201	Foxp2_Foxp3	ENSMUST00000103064.3|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr9_+_70679016_70679116	0.457541	Foxp2_Foxp3	ENSMUST00000144537.1|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr13_+_5861489_5861501	0.456454	Foxp2_Foxp3	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr12_-_31950210_31950246	0.45462	Foxp2_Foxp3	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr16_+_87354185_87354249	0.452776	Foxp2_Foxp3	ENSMUST00000054442.4|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118310.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000120284.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118115.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm10_v2_chr1_-_180245927_180245955	0.448891	Foxp2_Foxp3	ENSMUST00000010753.7|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr5_+_31251678_31251728	0.44819	Foxp2_Foxp3	ENSMUST00000054829.7|Krtcap3|ENSMUSG00000029149.8|keratinocyte associated protein 3 	ENSMUST00000114570.1|Krtcap3|ENSMUSG00000029149.8|keratinocyte associated protein 3 	ENSMUST00000075611.7|Krtcap3|ENSMUSG00000029149.8|keratinocyte associated protein 3
mm10_v2_chrX_+_94234982_94234997	0.448187	Foxp2_Foxp3	ENSMUST00000096369.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113911.2|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr5_-_107875035_107875107	0.442625	Foxp2_Foxp3	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr2_+_91730127_91730225	0.441569	Foxp2_Foxp3	ENSMUST00000099712.3|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111317.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111316.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000045705.7|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1
mm10_v2_chrX_+_161717498_161717627	0.440108	Foxp2_Foxp3	ENSMUST00000061514.7|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr6_-_88874597_88874796	0.436024	Foxp2_Foxp3	ENSMUST00000061262.4|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000140455.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000145780.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chrX_+_20848543_20848589	0.43549	Foxp2_Foxp3	ENSMUST00000001155.4|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000122312.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000120356.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000122850.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog
mm10_v2_chr15_+_80711292_80711340	0.435463	Foxp2_Foxp3	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr3_+_76075583_76075583	0.435396	Foxp2_Foxp3	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr11_+_107547925_107547968	0.434837	Foxp2_Foxp3	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr13_-_9878998_9878998	0.432599	Foxp2_Foxp3	ENSMUST00000063093.9|Chrm3|ENSMUSG00000046159.9|cholinergic receptor, muscarinic 3, cardiac
mm10_v2_chr6_-_59024470_59024549	0.425423	Foxp2_Foxp3	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr11_-_110168073_110168196	0.419496	Foxp2_Foxp3	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr12_+_76081645_76081661	0.417922	Foxp2_Foxp3	ENSMUST00000154509.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr11_-_106788486_106788532	0.40753	Foxp2_Foxp3	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr17_+_24886643_24886765	0.406096	Foxp2_Foxp3	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr3_+_76593550_76593550	0.40522	Foxp2_Foxp3	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr11_+_87578384_87578470	0.404553	Foxp2_Foxp3	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr11_+_102285161_102285251	0.403069	Foxp2_Foxp3	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr9_-_44713196_44713265	0.402814	Foxp2_Foxp3	ENSMUST00000144251.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000156918.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr4_+_102570065_102570124	0.398801	Foxp2_Foxp3	ENSMUST00000097950.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr2_+_146855861_146855926	0.395844	Foxp2_Foxp3	ENSMUST00000099278.2|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1 	ENSMUST00000156232.1|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1
mm10_v2_chr2_+_32151074_32151262	0.395371	Foxp2_Foxp3	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr1_+_10056922_10056926	0.39462	Foxp2_Foxp3	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr2_-_80128834_80128996	0.393529	Foxp2_Foxp3	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr8_+_25720054_25720099	0.391012	Foxp2_Foxp3	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr16_+_33518278_33518340	0.389213	Foxp2_Foxp3	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr19_+_8741473_8741503	0.388394	Foxp2_Foxp3	ENSMUST00000177373.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000010254.9|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr1_-_54194048_54194048	0.387228	Foxp2_Foxp3	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr12_+_84451485_84451518	0.384778	Foxp2_Foxp3	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr15_-_54919961_54920037	0.378503	Foxp2_Foxp3	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr9_+_70656248_70656261	0.378162	Foxp2_Foxp3	ENSMUST00000098589.2|Gm10642|ENSMUSG00000074213.2|predicted gene 10642
mm10_v2_chr19_+_8741413_8741461	0.376179	Foxp2_Foxp3	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr6_+_124916863_124916863	0.374879	Foxp2_Foxp3	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr1_-_87573825_87573871	0.372289	Foxp2_Foxp3	ENSMUST00000068681.5|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr11_+_85311232_85311286	0.369743	Foxp2_Foxp3	ENSMUST00000020835.9|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr12_-_31950535_31950560	0.369706	Foxp2_Foxp3	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr10_+_62920648_62920682	0.368043	Foxp2_Foxp3	ENSMUST00000144459.1|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr19_+_25672408_25672420	0.364183	Foxp2_Foxp3	ENSMUST00000053068.5|Dmrt2|ENSMUSG00000048138.9|doublesex and mab-3 related transcription factor 2
mm10_v2_chr1_+_57845534_57845571	0.363342	Foxp2_Foxp3	ENSMUST00000169772.1|Spats2l|ENSMUSG00000038305.8|spermatogenesis associated, serine-rich 2-like
mm10_v2_chr9_+_57910974_57911023	0.362975	Foxp2_Foxp3	ENSMUST00000163329.1|Ubl7|ENSMUSG00000055720.9|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm10_v2_chr13_-_76018524_76018712	0.356773	Foxp2_Foxp3	ENSMUST00000050997.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000179078.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000167271.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing
mm10_v2_chr9_-_16378231_16378231	0.355902	Foxp2_Foxp3	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr14_-_68655804_68655842	0.354922	Foxp2_Foxp3	ENSMUST00000111072.1|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28 	ENSMUST00000022642.5|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28
mm10_v2_chr14_-_52213379_52213379	0.352708	Foxp2_Foxp3	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr5_+_64812336_64812350	0.35191	Foxp2_Foxp3	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chrX_-_150814265_150814345	0.349165	Foxp2_Foxp3	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr9_+_70678950_70679010	0.344272	Foxp2_Foxp3	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr15_-_98918131_98918231	0.341833	Foxp2_Foxp3	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr15_-_79285502_79285537	0.339754	Foxp2_Foxp3	ENSMUST00000165408.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr16_-_63864114_63864182	0.33861	Foxp2_Foxp3	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr2_-_121271315_121271322	0.336658	Foxp2_Foxp3	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr10_+_90071095_90071117	0.330673	Foxp2_Foxp3	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr10_+_18235030_18235054	0.328197	Foxp2_Foxp3	ENSMUST00000181897.1|Gm10827|ENSMUSG00000096977.1|predicted gene 10827
mm10_v2_chr13_+_118714678_118714701	0.327997	Foxp2_Foxp3	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr2_-_175131864_175131864	0.32653	Foxp2_Foxp3	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr15_+_102144362_102144486	0.324495	Foxp2_Foxp3	ENSMUST00000023807.6|Igfbp6|ENSMUSG00000023046.6|insulin-like growth factor binding protein 6
mm10_v2_chr2_+_60209887_60210073	0.324397	Foxp2_Foxp3	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr15_-_101850778_101850792	0.320174	Foxp2_Foxp3	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr17_-_51810866_51810919	0.31775	Foxp2_Foxp3	ENSMUST00000176669.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr3_+_84925476_84925488	0.317187	Foxp2_Foxp3	ENSMUST00000107675.1|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr6_-_39725448_39725478	0.313399	Foxp2_Foxp3	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr15_+_6422240_6422327	0.31323	Foxp2_Foxp3	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr7_+_141061274_141061311	0.313161	Foxp2_Foxp3	ENSMUST00000048002.5|B4galnt4|ENSMUSG00000055629.4|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm10_v2_chr5_-_31047998_31048009	0.310798	Foxp2_Foxp3	ENSMUST00000114665.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6 	ENSMUST00000006817.4|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chr11_+_4883186_4883222	0.308089	Foxp2_Foxp3	ENSMUST00000139737.1|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chr10_+_127421124_127421203	0.299689	Foxp2_Foxp3	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr5_-_146221391_146221420	0.297578	Foxp2_Foxp3	ENSMUST00000161574.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr2_-_80129458_80129549	0.297469	Foxp2_Foxp3	ENSMUST00000102653.1|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr2_-_37647199_37647285	0.296302	Foxp2_Foxp3	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr6_-_83831736_83831750	0.295138	Foxp2_Foxp3	ENSMUST00000058383.8|Paip2b|ENSMUSG00000045896.8|poly(A) binding protein interacting protein 2B
mm10_v2_chr13_-_51203065_51203065	0.291646	Foxp2_Foxp3	ENSMUST00000091708.4|Hist1h2al|ENSMUSG00000091383.1|histone cluster 1, H2al
mm10_v2_chr4_-_133339238_133339271	0.288642	Foxp2_Foxp3	ENSMUST00000105906.1|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr12_-_31499541_31499616	0.285352	Foxp2_Foxp3	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr19_+_30030589_30030634	0.285235	Foxp2_Foxp3	ENSMUST00000112552.1|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr4_-_11981265_11981265	0.281711	Foxp2_Foxp3	ENSMUST00000098260.2|Gm10604|ENSMUSG00000073995.2|predicted gene 10604
mm10_v2_chr13_+_104109752_104109829	0.280811	Foxp2_Foxp3	ENSMUST00000160322.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta 	ENSMUST00000159574.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr1_-_75142360_75142424	0.28032	Foxp2_Foxp3	ENSMUST00000041213.5|Cnppd1|ENSMUSG00000033159.8|cyclin Pas1/PHO80 domain containing 1
mm10_v2_chr7_+_101317073_101317132	0.28019	Foxp2_Foxp3	ENSMUST00000163799.2|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000164479.2|Stard10|ENSMUSG00000030688.8|START domain containing 10
mm10_v2_chr14_+_120275669_120275714	0.274501	Foxp2_Foxp3	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr9_+_110333402_110333636	0.273674	Foxp2_Foxp3	ENSMUST00000133114.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000125759.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr10_-_117292863_117292870	0.272434	Foxp2_Foxp3	ENSMUST00000092162.5|Lyz1|ENSMUSG00000069515.5|lysozyme 1
mm10_v2_chr7_+_119900099_119900108	0.269376	Foxp2_Foxp3	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr3_-_152193803_152193831	0.2648	Foxp2_Foxp3	ENSMUST00000050073.6|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr4_+_11123950_11123980	0.26455	Foxp2_Foxp3	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr5_-_122989086_122989111	0.263753	Foxp2_Foxp3	ENSMUST00000046073.9|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr3_+_55140033_55140055	0.26283	Foxp2_Foxp3	ENSMUST00000118963.2|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000061099.7|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000153009.1|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169
mm10_v2_chr1_+_132506230_132506259	0.262586	Foxp2_Foxp3	ENSMUST00000058167.1|Tmem81|ENSMUSG00000048174.1|transmembrane protein 81
mm10_v2_chr7_-_29505447_29505473	0.262089	Foxp2_Foxp3	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr11_-_97150025_97150084	0.259944	Foxp2_Foxp3	ENSMUST00000118375.1|Tbkbp1|ENSMUSG00000038517.9|TBK1 binding protein 1
mm10_v2_chr4_-_133339283_133339334	0.255649	Foxp2_Foxp3	ENSMUST00000043305.7|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr8_+_70724064_70724078	0.254861	Foxp2_Foxp3	ENSMUST00000034307.7|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific 	ENSMUST00000110095.2|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific
mm10_v2_chr12_+_55155104_55155104	0.254152	Foxp2_Foxp3	ENSMUST00000110708.2|Srp54b|ENSMUSG00000079108.4|signal recognition particle 54B
mm10_v2_chr1_-_156939387_156939549	0.253045	Foxp2_Foxp3	ENSMUST00000171292.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr5_-_24995748_24995759	0.251383	Foxp2_Foxp3	ENSMUST00000076306.5|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr8_+_31089471_31089760	0.251346	Foxp2_Foxp3	ENSMUST00000036631.7|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative) 	ENSMUST00000170204.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr2_-_15049254_15049339	0.242784	Foxp2_Foxp3	ENSMUST00000028034.8|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6 	ENSMUST00000114713.1|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6
mm10_v2_chr15_+_99392948_99393022	0.233225	Foxp2_Foxp3	ENSMUST00000161250.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000160635.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000161778.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr6_+_79818031_79818031	0.23288	Foxp2_Foxp3	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chrX_+_7909542_7909542	0.231547	Foxp2_Foxp3	ENSMUST00000086274.2|Gm10490|ENSMUSG00000073290.1|predicted gene 10490
mm10_v2_chr2_-_154613425_154613444	0.227798	Foxp2_Foxp3	ENSMUST00000181369.1|4930519P11Rik|ENSMUSG00000097602.1|RIKEN cDNA 4930519P11 gene
mm10_v2_chr2_-_121271341_121271397	0.227221	Foxp2_Foxp3	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr15_-_81045467_81045546	0.210883	Foxp2_Foxp3	ENSMUST00000135047.1|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr8_+_31091593_31091650	0.210604	Foxp2_Foxp3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr2_-_163645125_163645136	0.207836	Foxp2_Foxp3	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr10_+_80115779_80115824	0.20512	Foxp2_Foxp3	ENSMUST00000003152.7|Stk11|ENSMUSG00000003068.9|serine/threonine kinase 11
mm10_v2_chr1_-_152625212_152625220	0.204635	Foxp2_Foxp3	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr19_-_7483241_7483289	0.202256	Foxp2_Foxp3	ENSMUST00000025667.6|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000065304.5|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000088171.4|Rtn3|ENSMUSG00000024758.8|reticulon 3
mm10_v2_chr13_+_83738874_83738887	0.202119	Foxp2_Foxp3	ENSMUST00000052354.4|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr15_-_53346118_53346169	0.201842	Foxp2_Foxp3	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr16_+_19028232_19028232	0.201386	Foxp2_Foxp3	ENSMUST00000074116.4|Gm10088|ENSMUSG00000060811.4|predicted gene 10088
mm10_v2_chr17_+_34031787_34031821	0.199593	Foxp2_Foxp3	ENSMUST00000044858.8|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr1_-_170110491_170110532	0.198455	Foxp2_Foxp3	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr18_+_65580230_65580400	0.195136	Foxp2_Foxp3	ENSMUST00000049016.5|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183236.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr10_+_102158858_102158889	0.192021	Foxp2_Foxp3	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr2_+_166792525_166792536	0.188921	Foxp2_Foxp3	ENSMUST00000065753.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr4_+_19605451_19605451	0.187821	Foxp2_Foxp3	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr8_-_119558718_119558766	0.186707	Foxp2_Foxp3	ENSMUST00000081381.4|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1 	ENSMUST00000098362.3|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1
mm10_v2_chr10_-_128696257_128696273	0.185979	Foxp2_Foxp3	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr10_-_5069044_5069079	0.181025	Foxp2_Foxp3	ENSMUST00000095899.3|Syne1|ENSMUSG00000019769.10|spectrin repeat containing, nuclear envelope 1
mm10_v2_chr17_-_46680870_46680933	0.177357	Foxp2_Foxp3	ENSMUST00000165007.1|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3 	ENSMUST00000071841.5|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3
mm10_v2_chr5_+_139389785_139389920	0.17603	Foxp2_Foxp3	ENSMUST00000100514.2|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr7_+_24271568_24271568	0.175416	Foxp2_Foxp3	ENSMUST00000032696.6|Zfp93|ENSMUSG00000055305.9|zinc finger protein 93
mm10_v2_chr17_-_65884902_65884937	0.174181	Foxp2_Foxp3	ENSMUST00000024905.9|Ralbp1|ENSMUSG00000024096.10|ralA binding protein 1
mm10_v2_chr11_+_110968016_110968042	0.170891	Foxp2_Foxp3	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr15_+_23036449_23036492	0.168298	Foxp2_Foxp3	ENSMUST00000164787.1|Cdh18|ENSMUSG00000040420.8|cadherin 18
mm10_v2_chr14_-_41008256_41008275	0.167428	Foxp2_Foxp3	ENSMUST00000136661.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr6_-_29609811_29609887	0.167093	Foxp2_Foxp3	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr4_+_94739276_94739300	0.165663	Foxp2_Foxp3	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr10_+_127421208_127421235	0.163534	Foxp2_Foxp3	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr8_-_58911627_58911627	0.156072	Foxp2_Foxp3	ENSMUST00000077447.4|Galntl6|ENSMUSG00000061864.6|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr7_+_81862674_81862692	0.15553	Foxp2_Foxp3	ENSMUST00000119543.1|Tm6sf1|ENSMUSG00000038623.3|transmembrane 6 superfamily member 1
mm10_v2_chr5_-_122989260_122989306	0.152023	Foxp2_Foxp3	ENSMUST00000118027.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr2_+_164486856_164486898	0.151331	Foxp2_Foxp3	ENSMUST00000109349.2|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr10_+_127420867_127420916	0.149485	Foxp2_Foxp3	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr2_+_90987603_90987746	0.148973	Foxp2_Foxp3	ENSMUST00000111452.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111455.2|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr2_+_128126030_128126056	0.146224	Foxp2_Foxp3	ENSMUST00000089634.5|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000019281.7|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000110341.2|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103211.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator) 	ENSMUST00000103210.1|Bcl2l11|ENSMUSG00000027381.10|BCL2-like 11 (apoptosis facilitator)
mm10_v2_chr3_+_31902666_31902703	0.1455	Foxp2_Foxp3	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr12_+_71170589_71170589	0.143133	Foxp2_Foxp3	ENSMUST00000129376.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr7_-_80402743_80402762	0.14195	Foxp2_Foxp3	ENSMUST00000122232.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr2_-_104028287_104028337	0.132218	Foxp2_Foxp3	ENSMUST00000056170.3|4931422A03Rik|ENSMUSG00000046085.7|RIKEN cDNA 4931422A03 gene
mm10_v2_chr15_+_99392882_99392903	0.129039	Foxp2_Foxp3	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr18_-_38918642_38918771	0.127862	Foxp2_Foxp3	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr10_+_62920630_62920646	0.122984	Foxp2_Foxp3	ENSMUST00000044977.3|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr8_+_58911755_58911755	0.120501	Foxp2_Foxp3	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr16_-_17911303_17911354	0.118201	Foxp2_Foxp3	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr18_-_7626809_7626880	0.116647	Foxp2_Foxp3	ENSMUST00000115869.2|Mpp7|ENSMUSG00000057440.7|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
mm10_v2_chr2_+_31974427_31974448	0.111496	Foxp2_Foxp3	ENSMUST00000065398.6|Nup214|ENSMUSG00000001855.9|nucleoporin 214
mm10_v2_chr6_+_136954521_136954529	0.109904	Foxp2_Foxp3	ENSMUST00000137768.1|Pde6h|ENSMUSG00000064330.7|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm10_v2_chr5_+_86804214_86804276	0.107886	Foxp2_Foxp3	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr19_+_6046576_6046662	0.103872	Foxp2_Foxp3	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr5_-_122988533_122988705	0.103087	Foxp2_Foxp3	ENSMUST00000086200.4|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B 	ENSMUST00000156474.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr12_-_76962178_76962248	0.102314	Foxp2_Foxp3	ENSMUST00000110395.3|Max|ENSMUSG00000059436.6|Max protein 	ENSMUST00000082136.5|Max|ENSMUSG00000059436.6|Max protein
mm10_v2_chr2_+_85050439_85050500	0.101376	Foxp2_Foxp3	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr3_-_95106779_95106897	0.0991962	Foxp2_Foxp3	ENSMUST00000005768.7|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107232.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107236.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr1_+_87403705_87403726	0.0983939	Foxp2_Foxp3	ENSMUST00000172736.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr2_+_24976033_24976110	0.095758	Foxp2_Foxp3	ENSMUST00000045295.7|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7 	ENSMUST00000153618.1|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7 	ENSMUST00000152777.1|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7
mm10_v2_chr1_-_190170178_190170237	0.0919254	Foxp2_Foxp3	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr11_+_114851142_114851173	0.090797	Foxp2_Foxp3	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr1_+_66468364_66468435	0.089293	Foxp2_Foxp3	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr19_-_41848076_41848132	0.0887012	Foxp2_Foxp3	ENSMUST00000059231.2|Frat2|ENSMUSG00000047604.2|frequently rearranged in advanced T cell lymphomas 2
mm10_v2_chr15_-_54920115_54920146	0.0875892	Foxp2_Foxp3	ENSMUST00000171545.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr15_+_97784355_97784457	0.0830858	Foxp2_Foxp3	ENSMUST00000117892.1|Slc48a1|ENSMUSG00000081534.2|solute carrier family 48 (heme transporter), member 1
mm10_v2_chr3_+_19957037_19957073	0.0800932	Foxp2_Foxp3	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr13_-_107890059_107890073	0.0798575	Foxp2_Foxp3	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr6_-_86765866_86765921	0.0794093	Foxp2_Foxp3	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr3_+_84593547_84593574	0.0791715	Foxp2_Foxp3	ENSMUST00000062623.3|Tigd4|ENSMUSG00000047819.3|tigger transposable element derived 4
mm10_v2_chr1_-_4496363_4496389	0.078792	Foxp2_Foxp3	ENSMUST00000116652.2|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr14_+_58072686_58072686	0.0767215	Foxp2_Foxp3	ENSMUST00000022545.7|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr19_-_7341433_7341647	0.0751767	Foxp2_Foxp3	ENSMUST00000165965.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000051711.9|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000169541.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165989.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr17_+_34032071_34032196	0.0746512	Foxp2_Foxp3	ENSMUST00000174299.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta 	ENSMUST00000173554.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr10_+_62071014_62071020	0.0744029	Foxp2_Foxp3	ENSMUST00000053865.5|Gm5424|ENSMUSG00000046687.5|predicted gene 5424
mm10_v2_chr9_-_53248106_53248117	0.0731822	Foxp2_Foxp3	ENSMUST00000065630.6|Ddx10|ENSMUSG00000053289.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm10_v2_chr9_-_103230262_103230307	0.0728672	Foxp2_Foxp3	ENSMUST00000165296.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000112645.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000166836.1|Gm20425|ENSMUSG00000090639.1|predicted gene 20425
mm10_v2_chr5_-_38491948_38491961	0.070809	Foxp2_Foxp3	ENSMUST00000129099.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr8_-_125492710_125492710	0.0695083	Foxp2_Foxp3	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr10_-_53647080_53647080	0.0660063	Foxp2_Foxp3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr1_+_16688405_16688458	0.0655456	Foxp2_Foxp3	ENSMUST00000026881.4|Ly96|ENSMUSG00000025779.4|lymphocyte antigen 96
mm10_v2_chr17_+_84957993_84958018	0.06515	Foxp2_Foxp3	ENSMUST00000080217.6|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform 	ENSMUST00000112304.2|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr1_-_13374072_13374083	0.0631206	Foxp2_Foxp3	ENSMUST00000068304.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2 	ENSMUST00000006037.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr8_-_31918203_31918368	0.0608674	Foxp2_Foxp3	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr12_-_31950170_31950197	0.0591226	Foxp2_Foxp3	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr6_+_116650674_116650690	0.0589063	Foxp2_Foxp3	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chr10_+_22645011_22645109	0.0582765	Foxp2_Foxp3	ENSMUST00000042261.4|Slc2a12|ENSMUSG00000037490.5|solute carrier family 2 (facilitated glucose transporter), member 12
mm10_v2_chr6_-_39725193_39725357	0.0472882	Foxp2_Foxp3	ENSMUST00000101497.3|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr7_+_6474088_6474088	0.0432162	Foxp2_Foxp3	ENSMUST00000056144.5|Olfr1346|ENSMUSG00000054938.4|olfactory receptor 1346
mm10_v2_chr9_+_96196246_96196280	0.038595	Foxp2_Foxp3	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr6_+_34709610_34709635	0.0380168	Foxp2_Foxp3	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_+_120232921_120232952	0.0375524	Foxp2_Foxp3	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr11_-_106715251_106715394	0.0370077	Foxp2_Foxp3	ENSMUST00000080853.4|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000183610.1|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000103069.3|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000106796.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr8_-_84237042_84237061	0.0346294	Foxp2_Foxp3	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr7_-_102065044_102065159	0.0342489	Foxp2_Foxp3	ENSMUST00000130074.1|Rnf121|ENSMUSG00000070426.6|ring finger protein 121 	ENSMUST00000131104.1|Rnf121|ENSMUSG00000070426.6|ring finger protein 121 	ENSMUST00000096639.5|Rnf121|ENSMUSG00000070426.6|ring finger protein 121
mm10_v2_chr10_-_96409038_96409038	0.0330856	Foxp2_Foxp3	ENSMUST00000179683.1|Gm20091|ENSMUSG00000094249.1|predicted gene, 20091
mm10_v2_chr10_-_53638269_53638269	0.032779	Foxp2_Foxp3	ENSMUST00000164393.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr9_+_57148180_57148180	0.0325996	Foxp2_Foxp3	ENSMUST00000105102.2|Gm16493|ENSMUSG00000078306.2|predicted gene 16493
mm10_v2_chr7_-_62420139_62420157	0.0296613	Foxp2_Foxp3	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr13_+_104287855_104287882	0.0290413	Foxp2_Foxp3	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chr11_-_86807624_86807746	0.0259497	Foxp2_Foxp3	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr4_-_148500449_148500466	0.0257718	Foxp2_Foxp3	ENSMUST00000030840.3|Angptl7|ENSMUSG00000028989.3|angiopoietin-like 7
mm10_v2_chr11_-_116110211_116110259	0.0220606	Foxp2_Foxp3	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr1_-_4496400_4496420	0.0205813	Foxp2_Foxp3	ENSMUST00000027035.3|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr3_+_97901190_97901250	0.0185731	Foxp2_Foxp3	ENSMUST00000029476.2|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 	ENSMUST00000122288.1|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm10_v2_chr3_-_50443603_50443615	0.016546	Foxp2_Foxp3	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr4_-_110290884_110290913	0.014137	Foxp2_Foxp3	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr4_-_43653542_43653557	0.0119304	Foxp2_Foxp3	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr1_+_52119438_52119499	0.0117706	Foxp2_Foxp3	ENSMUST00000070968.7|Stat1|ENSMUSG00000026104.8|signal transducer and activator of transcription 1
mm10_v2_chr2_+_26973416_26973505	0.0115575	Foxp2_Foxp3	ENSMUST00000014996.7|Adamts13|ENSMUSG00000014852.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 	ENSMUST00000102891.3|Adamts13|ENSMUSG00000014852.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm10_v2_chr3_-_95106907_95106930	0.0108149	Foxp2_Foxp3	ENSMUST00000107233.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr11_-_17008647_17008702	0.00937162	Foxp2_Foxp3	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr2_+_15049395_15049447	0.00779718	Foxp2_Foxp3	ENSMUST00000017562.6|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr6_-_70792155_70792232	0.00605411	Foxp2_Foxp3	ENSMUST00000066134.5|Rpia|ENSMUSG00000053604.5|ribose 5-phosphate isomerase A
mm10_v2_chr14_-_45388772_45388836	0.00325805	Foxp2_Foxp3	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
