mm10_v2_chr6_-_23248264_23248390	7.83927	Homez	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr4_-_117178726_117178754	7.55608	Homez	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr4_+_44300876_44300936	6.04225	Homez	ENSMUST00000045607.5|Melk|ENSMUSG00000035683.7|maternal embryonic leucine zipper kinase
mm10_v2_chr11_+_101627942_101627972	4.78459	Homez	ENSMUST00000010506.3|Rdm1|ENSMUSG00000010362.3|RAD52 motif 1
mm10_v2_chr8_-_4779513_4779591	4.67355	Homez	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr18_+_50030977_50031043	4.03035	Homez	ENSMUST00000145726.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8 	ENSMUST00000128377.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8
mm10_v2_chr8_+_116921735_116921752	4.02661	Homez	ENSMUST00000034205.4|Cenpn|ENSMUSG00000031756.4|centromere protein N
mm10_v2_chr16_-_26989974_26989974	3.76123	Homez	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr3_+_90220783_90220830	3.75101	Homez	ENSMUST00000065418.6|Rab13|ENSMUSG00000027935.8|RAB13, member RAS oncogene family
mm10_v2_chr6_+_137754529_137754599	3.58553	Homez	ENSMUST00000087675.6|Dera|ENSMUSG00000030225.9|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm10_v2_chr17_+_87635974_87635990	3.52506	Homez	ENSMUST00000053577.8|Epcam|ENSMUSG00000045394.8|epithelial cell adhesion molecule
mm10_v2_chr8_-_72305276_72305276	3.28601	Homez	ENSMUST00000075602.6|Gm10282|ENSMUSG00000070713.4|predicted pseudogene 10282
mm10_v2_chr2_+_71389239_71389278	3.2567	Homez	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr7_+_67647405_67647456	3.24654	Homez	ENSMUST00000032774.8|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23 	ENSMUST00000107471.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr1_-_20820213_20820286	3.09769	Homez	ENSMUST00000053266.9|Mcm3|ENSMUSG00000041859.9|minichromosome maintenance deficient 3 (S. cerevisiae)
mm10_v2_chr17_+_24426676_24426701	3.0154	Homez	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr7_-_62464505_62464548	2.88859	Homez	ENSMUST00000094339.2|Peg12|ENSMUSG00000070526.2|paternally expressed 12
mm10_v2_chr9_-_36726374_36726658	2.73731	Homez	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr19_-_30175414_30175436	2.71362	Homez	ENSMUST00000025778.7|Gldc|ENSMUSG00000024827.9|glycine decarboxylase
mm10_v2_chr9_+_91368811_91368828	2.65905	Homez	ENSMUST00000173054.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr1_-_163994767_163994808	2.62084	Homez	ENSMUST00000097493.3|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324 	ENSMUST00000045876.6|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324
mm10_v2_chr19_-_36919606_36919622	2.60937	Homez	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chr7_-_38227975_38228000	2.58347	Homez	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr9_+_91368970_91369073	2.54053	Homez	ENSMUST00000172646.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr8_-_116921408_116921455	2.52863	Homez	ENSMUST00000078589.6|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2 	ENSMUST00000148235.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr5_-_8422695_8422727	2.46976	Homez	ENSMUST00000171808.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr10_+_24595434_24595445	2.43976	Homez	ENSMUST00000020171.5|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr9_-_64172879_64172918	2.42641	Homez	ENSMUST00000176299.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000130127.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000176794.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000177045.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein
mm10_v2_chr8_-_116921365_116921392	2.42128	Homez	ENSMUST00000128304.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr10_+_24595623_24595780	2.40105	Homez	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr18_+_84088077_84088178	2.38187	Homez	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr5_-_8422582_8422693	2.37074	Homez	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr7_-_30664986_30664999	2.323	Homez	ENSMUST00000019697.8|Haus5|ENSMUSG00000078762.4|HAUS augmin-like complex, subunit 5
mm10_v2_chr4_+_63215402_63215435	2.2853	Homez	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr3_-_63899437_63899477	2.22864	Homez	ENSMUST00000159188.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000177143.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr3_+_5218546_5218561	2.20341	Homez	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr11_-_106998483_106998491	2.18929	Homez	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr14_-_47276790_47276848	2.12883	Homez	ENSMUST00000111792.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111791.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111790.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1
mm10_v2_chr1_-_138619687_138619759	2.12877	Homez	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chrX_+_36795642_36795653	2.09724	Homez	ENSMUST00000016463.3|Slc25a5|ENSMUSG00000016319.3|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm10_v2_chr4_+_115057683_115057811	1.98446	Homez	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chrX_+_139217166_139217190	1.9397	Homez	ENSMUST00000166444.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000170671.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113041.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113042.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1
mm10_v2_chr1_-_136230289_136230332	1.92454	Homez	ENSMUST00000150163.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene 	ENSMUST00000144464.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene
mm10_v2_chr6_+_85587524_85587544	1.92138	Homez	ENSMUST00000072018.5|Alms1|ENSMUSG00000063810.5|Alstrom syndrome 1
mm10_v2_chr11_-_48826500_48826500	1.91438	Homez	ENSMUST00000161192.2|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr6_+_30723541_30723552	1.85077	Homez	ENSMUST00000115127.1|Mest|ENSMUSG00000051855.9|mesoderm specific transcript
mm10_v2_chr17_+_26542760_26542760	1.81275	Homez	ENSMUST00000090257.4|Gm8225|ENSMUSG00000068604.4|predicted gene 8225
mm10_v2_chr18_-_62756275_62756347	1.79224	Homez	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr4_-_134767940_134768024	1.73866	Homez	ENSMUST00000037828.6|Ldlrap1|ENSMUSG00000037295.6|low density lipoprotein receptor adaptor protein 1
mm10_v2_chr6_-_42645254_42645254	1.67066	Homez	ENSMUST00000031879.3|Fam115c|ENSMUSG00000029851.4|family with sequence similarity 115, member C
mm10_v2_chr6_-_55175019_55175043	1.65996	Homez	ENSMUST00000003569.5|Inmt|ENSMUSG00000003477.5|indolethylamine N-methyltransferase
mm10_v2_chr3_-_79841729_79841729	1.63561	Homez	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr3_+_138143429_138143477	1.5916	Homez	ENSMUST00000040321.6|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr4_-_116994354_116994372	1.59038	Homez	ENSMUST00000130273.1|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr15_-_83464595_83464614	1.53458	Homez	ENSMUST00000171436.1|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chr12_-_80260356_80260371	1.50525	Homez	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr4_-_116994374_116994413	1.49163	Homez	ENSMUST00000030446.8|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr1_-_14310198_14310218	1.45625	Homez	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr8_-_84065137_84065137	1.41171	Homez	ENSMUST00000098592.2|Gm10643|ENSMUSG00000074215.2|predicted gene 10643
mm10_v2_chr6_+_71282280_71282280	1.40373	Homez	ENSMUST00000080949.7|Krcc1|ENSMUSG00000053012.11|lysine-rich coiled-coil 1
mm10_v2_chr9_+_87022014_87022179	1.40006	Homez	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr3_+_5218516_5218544	1.38989	Homez	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr3_+_85915722_85915722	1.38533	Homez	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr10_+_63386550_63386576	1.36084	Homez	ENSMUST00000043317.5|Dnajc12|ENSMUSG00000036764.5|DnaJ (Hsp40) homolog, subfamily C, member 12
mm10_v2_chr5_+_21785253_21785301	1.35194	Homez	ENSMUST00000030769.5|Psmc2|ENSMUSG00000028932.7|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm10_v2_chr3_-_90514250_90514392	1.34952	Homez	ENSMUST00000107340.1|S100a1|ENSMUSG00000044080.9|S100 calcium binding protein A1 	ENSMUST00000060738.8|S100a1|ENSMUSG00000044080.9|S100 calcium binding protein A1
mm10_v2_chr1_-_72212249_72212307	1.33674	Homez	ENSMUST00000048860.7|Mreg|ENSMUSG00000039395.7|melanoregulin
mm10_v2_chr2_-_58052832_58052870	1.31755	Homez	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr1_+_169969409_169969454	1.313	Homez	ENSMUST00000180638.1|3110045C21Rik|ENSMUSG00000097503.1|RIKEN cDNA 3110045C21 gene
mm10_v2_chr11_+_75999912_75999946	1.31142	Homez	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr5_+_75152274_75152297	1.30932	Homez	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chrX_+_20059535_20059574	1.29147	Homez	ENSMUST00000044138.7|Chst7|ENSMUSG00000037347.7|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm10_v2_chr9_+_89199319_89199379	1.28505	Homez	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr5_-_149051300_149051390	1.24078	Homez	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr15_+_79891631_79891694	1.20424	Homez	ENSMUST00000177350.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 	ENSMUST00000177483.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr4_+_115057410_115057438	1.20197	Homez	ENSMUST00000136946.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr5_+_129846980_129847036	1.20027	Homez	ENSMUST00000171300.1|Sumf2|ENSMUSG00000025538.9|sulfatase modifying factor 2
mm10_v2_chr12_-_69184056_69184083	1.1647	Homez	ENSMUST00000054544.6|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr9_-_58249660_58249672	1.11549	Homez	ENSMUST00000124063.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000126690.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr1_+_173420567_173420622	1.11547	Homez	ENSMUST00000173023.1|Aim2|ENSMUSG00000037860.9|absent in melanoma 2
mm10_v2_chr8_+_105900421_105900467	1.09275	Homez	ENSMUST00000049699.8|Pskh1|ENSMUSG00000048310.8|protein serine kinase H1
mm10_v2_chr3_-_138143352_138143396	1.07462	Homez	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr1_-_139377041_139377078	1.0594	Homez	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr1_+_87214286_87214369	1.05575	Homez	ENSMUST00000113231.3|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2
mm10_v2_chr2_-_25332481_25332571	1.04433	Homez	ENSMUST00000180841.1|AA543186|ENSMUSG00000097345.1|expressed sequence AA543186
mm10_v2_chr3_+_5218589_5218614	1.02327	Homez	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr9_-_21312255_21312333	0.99511	Homez	ENSMUST00000115433.3|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit 	ENSMUST00000003397.7|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit
mm10_v2_chr9_-_100486788_100486788	0.983951	Homez	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr6_+_83034173_83034252	0.983769	Homez	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr4_-_6454262_6454330	0.983071	Homez	ENSMUST00000029910.5|Nsmaf|ENSMUSG00000028245.9|neutral sphingomyelinase (N-SMase) activation associated factor
mm10_v2_chr15_+_79895017_79895036	0.966584	Homez	ENSMUST00000023054.7|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chrM_+_11734_11757	0.93026	Homez	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr6_-_112696604_112696686	0.929506	Homez	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chrX_-_49788204_49788243	0.916826	Homez	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr3_+_51415986_51416044	0.909639	Homez	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr6_+_149141638_149141663	0.900249	Homez	ENSMUST00000166416.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111551.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20
mm10_v2_chr1_+_163994866_163994904	0.897319	Homez	ENSMUST00000111490.1|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18 	ENSMUST00000045694.7|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18
mm10_v2_chr13_-_23698454_23698460	0.865118	Homez	ENSMUST00000102967.1|Hist1h4c|ENSMUSG00000060678.4|histone cluster 1, H4c
mm10_v2_chr19_+_47731743_47731768	0.854292	Homez	ENSMUST00000099353.4|Sfr1|ENSMUSG00000025066.9|SWI5 dependent recombination repair 1
mm10_v2_chr14_-_54653616_54653701	0.836491	Homez	ENSMUST00000126166.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000141453.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000150371.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000123875.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000022794.7|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000148754.3|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1
mm10_v2_chr19_-_31765027_31765079	0.835095	Homez	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr15_+_79659196_79659267	0.830202	Homez	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr4_+_132638987_132639118	0.827161	Homez	ENSMUST00000135299.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000081726.6|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000180250.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000020197.7|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000079157.4|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila)
mm10_v2_chr5_-_87490869_87490875	0.824207	Homez	ENSMUST00000147854.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr12_-_69183986_69184051	0.822703	Homez	ENSMUST00000110620.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like 	ENSMUST00000110619.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr11_+_77686155_77686179	0.81651	Homez	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr7_+_127470354_127470371	0.811678	Homez	ENSMUST00000106292.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr10_-_80039674_80039795	0.803783	Homez	ENSMUST00000004786.9|Polr2e|ENSMUSG00000004667.12|polymerase (RNA) II (DNA directed) polypeptide E
mm10_v2_chr8_+_36094828_36094868	0.793076	Homez	ENSMUST00000110492.1|D8Ertd82e|ENSMUSG00000050271.6|DNA segment, Chr 8, ERATO Doi 82, expressed
mm10_v2_chr10_+_111125851_111125851	0.77175	Homez	ENSMUST00000171120.1|Gm5428|ENSMUSG00000091086.1|predicted gene 5428
mm10_v2_chr13_-_41358990_41359006	0.761296	Homez	ENSMUST00000163623.1|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr4_-_107810948_107810948	0.746146	Homez	ENSMUST00000097930.1|B230314M03Rik|ENSMUSG00000073779.1|RIKEN cDNA B230314M03 gene
mm10_v2_chrX_-_157568983_157568991	0.727689	Homez	ENSMUST00000065806.4|Yy2|ENSMUSG00000091736.2|Yy2 transcription factor
mm10_v2_chr16_-_57606816_57606879	0.715493	Homez	ENSMUST00000114371.3|Cmss1|ENSMUSG00000022748.7|cms small ribosomal subunit 1
mm10_v2_chr2_-_77946331_77946373	0.715339	Homez	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr11_-_94242701_94242729	0.687686	Homez	ENSMUST00000061469.3|Wfikkn2|ENSMUSG00000044177.4|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm10_v2_chr10_+_127849917_127849928	0.670708	Homez	ENSMUST00000077530.2|Rdh19|ENSMUSG00000054052.5|retinol dehydrogenase 19
mm10_v2_chr9_-_44251464_44251491	0.670035	Homez	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr2_-_77946375_77946392	0.665221	Homez	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr7_+_140881898_140881968	0.663748	Homez	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr7_+_49910112_49910146	0.66235	Homez	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr9_-_58249702_58249791	0.648517	Homez	ENSMUST00000135310.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000085673.4|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000114136.2|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000153820.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000124982.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr2_-_127792467_127792505	0.63265	Homez	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr7_-_46710642_46710687	0.628538	Homez	ENSMUST00000143082.1|Saal1|ENSMUSG00000006763.6|serum amyloid A-like 1
mm10_v2_chr9_+_108339048_108339080	0.627207	Homez	ENSMUST00000082429.5|Gpx1|ENSMUSG00000063856.6|glutathione peroxidase 1
mm10_v2_chr15_+_9071252_9071273	0.626496	Homez	ENSMUST00000100789.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000100790.3|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000067760.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial
mm10_v2_chr5_-_21785115_21785251	0.622184	Homez	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr8_+_85171322_85171322	0.619233	Homez	ENSMUST00000076896.5|Gm6531|ENSMUSG00000062687.5|predicted gene 6531
mm10_v2_chr16_+_34690548_34690616	0.613772	Homez	ENSMUST00000023532.6|Ccdc14|ENSMUSG00000022833.6|coiled-coil domain containing 14
mm10_v2_chr14_-_27508460_27508503	0.605712	Homez	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr1_-_175979114_175979114	0.600203	Homez	ENSMUST00000104983.1|B020018G12Rik|ENSMUSG00000078184.1|RIKEN cDNA B020018G12 gene
mm10_v2_chr2_+_85037448_85037530	0.587912	Homez	ENSMUST00000168266.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1 	ENSMUST00000130729.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr13_+_90923122_90923170	0.578061	Homez	ENSMUST00000051955.7|Rps23|ENSMUSG00000049517.7|ribosomal protein S23
mm10_v2_chr4_+_152325831_152325876	0.56474	Homez	ENSMUST00000103191.4|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22 	ENSMUST00000139685.1|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22
mm10_v2_chr2_+_119034783_119034869	0.562874	Homez	ENSMUST00000028796.1|Rpusd2|ENSMUSG00000027324.1|RNA pseudouridylate synthase domain containing 2
mm10_v2_chr5_-_140830430_140830453	0.560924	Homez	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr14_-_52305056_52305130	0.558988	Homez	ENSMUST00000174853.1|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3 	ENSMUST00000022767.9|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3
mm10_v2_chr8_-_107588392_107588482	0.545389	Homez	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr9_+_64179289_64179349	0.545361	Homez	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr18_+_4375583_4375623	0.542199	Homez	ENSMUST00000025077.6|Mtpap|ENSMUSG00000024234.6|mitochondrial poly(A) polymerase
mm10_v2_chr2_-_106974383_106974424	0.53268	Homez	ENSMUST00000028536.6|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr5_-_149636164_149636190	0.52711	Homez	ENSMUST00000076410.4|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr9_+_64173364_64173388	0.519184	Homez	ENSMUST00000034966.7|Rpl4|ENSMUSG00000032399.7|ribosomal protein L4
mm10_v2_chr9_+_55150050_55150083	0.516213	Homez	ENSMUST00000122441.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr1_-_33757711_33757794	0.514899	Homez	ENSMUST00000044691.7|Bag2|ENSMUSG00000042215.7|BCL2-associated athanogene 2
mm10_v2_chr5_-_149636331_149636376	0.510234	Homez	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr2_-_77946180_77946199	0.504182	Homez	ENSMUST00000111824.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111819.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000128963.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr6_+_82052307_82052330	0.503641	Homez	ENSMUST00000149023.1|Eva1a|ENSMUSG00000035104.8|eva-1 homolog A (C. elegans)
mm10_v2_chr12_+_65036319_65036358	0.49856	Homez	ENSMUST00000120580.1|Prpf39|ENSMUSG00000035597.12|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm10_v2_chr2_+_163017354_163017513	0.497799	Homez	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr5_+_140419248_140419377	0.497521	Homez	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr16_-_8672145_8672161	0.494122	Homez	ENSMUST00000008537.8|Carhsp1|ENSMUSG00000008393.8|calcium regulated heat stable protein 1
mm10_v2_chrM_+_7759_7927	0.491086	Homez	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr2_-_174464063_174464105	0.49069	Homez	ENSMUST00000016396.7|Atp5e|ENSMUSG00000016252.7|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm10_v2_chr10_+_128747850_128747895	0.484757	Homez	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr9_+_110132015_110132102	0.484224	Homez	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr15_+_102407144_102407269	0.482762	Homez	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr18_+_10725530_10725564	0.480733	Homez	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr3_+_127791374_127791390	0.477543	Homez	ENSMUST00000171621.1|Tifa|ENSMUSG00000046688.8|TRAF-interacting protein with forkhead-associated domain
mm10_v2_chr17_-_25844514_25844565	0.463493	Homez	ENSMUST00000176709.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr4_-_141723401_141723436	0.452925	Homez	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr7_+_140882430_140882472	0.450348	Homez	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr11_-_103017167_103017179	0.44828	Homez	ENSMUST00000021313.2|Dcakd|ENSMUSG00000020935.2|dephospho-CoA kinase domain containing
mm10_v2_chr6_+_128662379_128662396	0.437363	Homez	ENSMUST00000032518.4|Clec2h|ENSMUSG00000030364.4|C-type lectin domain family 2, member h
mm10_v2_chr10_-_80918212_80918256	0.437089	Homez	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr12_+_55398775_55398894	0.422636	Homez	ENSMUST00000021412.8|Psma6|ENSMUSG00000021024.8|proteasome (prosome, macropain) subunit, alpha type 6
mm10_v2_chr1_+_172698046_172698063	0.418342	Homez	ENSMUST00000038495.3|Crp|ENSMUSG00000037942.4|C-reactive protein, pentraxin-related
mm10_v2_chr8_+_70673198_70673267	0.393496	Homez	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr10_-_63421739_63421739	0.392674	Homez	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chr1_+_78657874_78658038	0.392621	Homez	ENSMUST00000134566.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000142704.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000053760.5|Utp14b|ENSMUSG00000079470.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)
mm10_v2_chr12_-_40248073_40248086	0.383107	Homez	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr19_-_60790692_60790700	0.379082	Homez	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr1_+_78657825_78657868	0.378712	Homez	ENSMUST00000035779.8|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3
mm10_v2_chr16_+_91269759_91269778	0.376108	Homez	ENSMUST00000056882.5|Olig1|ENSMUSG00000046160.5|oligodendrocyte transcription factor 1
mm10_v2_chrX_-_37085402_37085402	0.373546	Homez	ENSMUST00000115231.3|Rpl39|ENSMUSG00000079641.3|ribosomal protein L39
mm10_v2_chr7_+_97480928_97480966	0.371941	Homez	ENSMUST00000026126.8|Ints4|ENSMUSG00000025133.8|integrator complex subunit 4
mm10_v2_chr2_+_180582712_180582742	0.371353	Homez	ENSMUST00000029085.8|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chrX_-_7947763_7947776	0.359407	Homez	ENSMUST00000154244.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr15_+_76797628_76797628	0.329693	Homez	ENSMUST00000165535.2|Gm17271|ENSMUSG00000090429.2|predicted gene, 17271
mm10_v2_chr18_-_42262053_42262140	0.317802	Homez	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr14_-_20393473_20393572	0.316569	Homez	ENSMUST00000061444.3|Mrps16|ENSMUSG00000049960.3|mitochondrial ribosomal protein S16
mm10_v2_chr17_+_27839974_27840119	0.315705	Homez	ENSMUST00000071006.7|Snrpc|ENSMUSG00000024217.9|U1 small nuclear ribonucleoprotein C
mm10_v2_chr2_-_26933781_26933928	0.314035	Homez	ENSMUST00000154651.1|Surf4|ENSMUSG00000014867.3|surfeit gene 4 	ENSMUST00000015011.3|Surf4|ENSMUSG00000014867.3|surfeit gene 4
mm10_v2_chr7_-_46958475_46958527	0.313594	Homez	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr8_+_123102344_123102351	0.307894	Homez	ENSMUST00000000756.5|Rpl13|ENSMUSG00000000740.5|ribosomal protein L13
mm10_v2_chr8_-_46080284_46080284	0.306536	Homez	ENSMUST00000177186.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr5_+_52783055_52783091	0.303886	Homez	ENSMUST00000113904.2|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4 	ENSMUST00000031077.8|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4
mm10_v2_chr12_-_115964196_115964196	0.303235	Homez	ENSMUST00000103550.2|Ighv1-83|ENSMUSG00000096466.1|immunoglobulin heavy variable 1-83
mm10_v2_chr13_+_22043189_22043214	0.298843	Homez	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr18_-_66002612_66002637	0.298574	Homez	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr3_-_130709419_130709451	0.287739	Homez	ENSMUST00000043937.7|Ostc|ENSMUSG00000041084.7|oligosaccharyltransferase complex subunit
mm10_v2_chr5_+_100518309_100518474	0.286023	Homez	ENSMUST00000045993.8|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) 	ENSMUST00000151414.1|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana)
mm10_v2_chr4_-_117682233_117682279	0.284883	Homez	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr1_+_132477361_132477412	0.279133	Homez	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr5_-_45856496_45856552	0.271974	Homez	ENSMUST00000087164.3|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000121573.1|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr16_-_91069142_91069159	0.267583	Homez	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr11_-_40695203_40695223	0.260316	Homez	ENSMUST00000101347.3|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr8_-_107425029_107425056	0.256583	Homez	ENSMUST00000003946.8|Nob1|ENSMUSG00000003848.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm10_v2_chr8_-_72213636_72213636	0.256431	Homez	ENSMUST00000109987.1|Gm11034|ENSMUSG00000079016.1|predicted gene 11034
mm10_v2_chr2_-_3419019_3419061	0.255834	Homez	ENSMUST00000115084.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1 	ENSMUST00000115083.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr1_+_92906959_92907036	0.25318	Homez	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr7_-_28598140_28598185	0.240871	Homez	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr6_-_56362356_56362519	0.240612	Homez	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr4_-_131937165_131937211	0.23631	Homez	ENSMUST00000155990.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr11_-_45955183_45955193	0.233862	Homez	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chrX_-_136743675_136743692	0.231874	Homez	ENSMUST00000166478.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113097.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr12_-_54695813_54695828	0.22881	Homez	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr7_-_45466894_45466901	0.226845	Homez	ENSMUST00000033093.8|Bax|ENSMUSG00000003873.10|BCL2-associated X protein
mm10_v2_chr9_+_22454290_22454290	0.223959	Homez	ENSMUST00000168332.1|Gm17545|ENSMUSG00000091159.1|predicted gene, 17545
mm10_v2_chr5_-_135251209_135251242	0.221057	Homez	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr9_+_22475867_22475889	0.221022	Homez	ENSMUST00000128812.1|Bbs9|ENSMUSG00000035919.10|Bardet-Biedl syndrome 9 (human)
mm10_v2_chr17_-_35162969_35163040	0.22013	Homez	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr3_+_157534103_157534160	0.217355	Homez	ENSMUST00000106058.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr16_-_18876655_18876767	0.216758	Homez	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr5_+_140735526_140735567	0.216462	Homez	ENSMUST00000120630.2|Amz1|ENSMUSG00000050022.10|archaelysin family metallopeptidase 1
mm10_v2_chr2_-_27475622_27475698	0.210966	Homez	ENSMUST00000138693.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000113941.2|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000077737.6|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr9_-_20952838_20952979	0.206574	Homez	ENSMUST00000004202.9|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr4_+_146654927_146654927	0.201019	Homez	ENSMUST00000070932.3|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr7_-_13278661_13278721	0.196806	Homez	ENSMUST00000144470.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000119558.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000108532.2|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene
mm10_v2_chr15_+_100353149_100353200	0.196329	Homez	ENSMUST00000075675.5|AB099516|ENSMUSG00000093789.1|cDNA sequence AB099516 	ENSMUST00000088142.5|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2 	ENSMUST00000176287.1|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2
mm10_v2_chr6_-_69284319_69284319	0.190225	Homez	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chr2_+_28468056_28468094	0.187812	Homez	ENSMUST00000038600.3|Mrps2|ENSMUSG00000035772.5|mitochondrial ribosomal protein S2
mm10_v2_chr7_+_127471009_127471036	0.181085	Homez	ENSMUST00000133938.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr7_-_130772652_130772652	0.173101	Homez	ENSMUST00000057134.4|Etos1|ENSMUSG00000050189.4|ectopic ossification 1
mm10_v2_chr8_+_88199194_88199224	0.165076	Homez	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr19_-_12501996_12502152	0.164187	Homez	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chrX_-_57392962_57392988	0.160068	Homez	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr2_-_3419066_3419129	0.155316	Homez	ENSMUST00000115082.3|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr1_-_181144133_181144183	0.155259	Homez	ENSMUST00000027797.7|Nvl|ENSMUSG00000026516.7|nuclear VCP-like
mm10_v2_chr1_+_59684949_59685023	0.154971	Homez	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr15_-_98221056_98221056	0.151277	Homez	ENSMUST00000170618.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287 	ENSMUST00000141911.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287
mm10_v2_chr3_+_137341067_137341095	0.150678	Homez	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chrX_-_37878944_37879037	0.146433	Homez	ENSMUST00000071885.6|Rhox8|ENSMUSG00000064137.6|reproductive homeobox 8
mm10_v2_chr11_-_48871408_48871424	0.142983	Homez	ENSMUST00000097271.2|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr11_+_116280939_116280939	0.132523	Homez	ENSMUST00000055872.2|Galr2|ENSMUSG00000020793.5|galanin receptor 2
mm10_v2_chr4_+_155705088_155705183	0.125985	Homez	ENSMUST00000105595.1|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr2_+_69723071_69723093	0.124145	Homez	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr16_+_11203375_11203448	0.124111	Homez	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr2_+_80638798_80638834	0.123579	Homez	ENSMUST00000028382.6|Nup35|ENSMUSG00000026999.8|nucleoporin 35 	ENSMUST00000124377.1|Nup35|ENSMUSG00000026999.8|nucleoporin 35
mm10_v2_chr8_+_70673364_70673432	0.120225	Homez	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr11_-_51650813_51650851	0.114904	Homez	ENSMUST00000142721.1|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3 	ENSMUST00000156835.1|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3 	ENSMUST00000001080.9|N4bp3|ENSMUSG00000001053.9|NEDD4 binding protein 3
mm10_v2_chr4_+_115839192_115839244	0.11353	Homez	ENSMUST00000019677.5|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000144427.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000106513.3|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000130819.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000151203.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000140315.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1
mm10_v2_chrX_-_57393020_57393040	0.110151	Homez	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr18_-_43477764_43477836	0.106893	Homez	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr8_-_111027752_111027791	0.0989337	Homez	ENSMUST00000040241.8|Ddx19b|ENSMUSG00000033658.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm10_v2_chr8_-_104534630_104534646	0.0959783	Homez	ENSMUST00000162466.1|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1 	ENSMUST00000034349.9|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1
mm10_v2_chr6_-_131293187_131293248	0.0953057	Homez	ENSMUST00000032307.5|Magohb|ENSMUSG00000030188.6|mago-nashi homolog B (Drosophila)
mm10_v2_chr18_-_35740499_35740554	0.0948466	Homez	ENSMUST00000115728.3|Tmem173|ENSMUSG00000024349.9|transmembrane protein 173
mm10_v2_chr12_-_54695885_54695897	0.0946684	Homez	ENSMUST00000067272.8|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr11_-_62281342_62281419	0.0936704	Homez	ENSMUST00000072916.4|Zswim7|ENSMUSG00000014243.5|zinc finger SWIM-type containing 7
mm10_v2_chr5_+_45520221_45520327	0.0934403	Homez	ENSMUST00000156481.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000119579.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000118833.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm10_v2_chrX_-_139714481_139714507	0.0918781	Homez	ENSMUST00000183728.1|Gm15013|ENSMUSG00000098559.1|predicted gene 15013
mm10_v2_chr11_-_48871344_48871407	0.0896227	Homez	ENSMUST00000049519.3|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr2_+_30281043_30281043	0.0859661	Homez	ENSMUST00000143119.2|RP23-395P6.9|ENSMUSG00000098794.1|RP23-395P6.9
mm10_v2_chr17_+_22689771_22689771	0.0812929	Homez	ENSMUST00000055305.8|Gm9805|ENSMUSG00000046088.8|predicted gene 9805
mm10_v2_chr5_-_24581879_24581879	0.0768519	Homez	ENSMUST00000088299.4|Gm10221|ENSMUSG00000067719.4|predicted gene 10221
mm10_v2_chr1_+_118321834_118321882	0.0758298	Homez	ENSMUST00000027626.6|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein 	ENSMUST00000112688.3|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein
mm10_v2_chr2_+_61711694_61711786	0.0731309	Homez	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chr8_+_13435459_13435503	0.0708569	Homez	ENSMUST00000167071.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B 	ENSMUST00000167505.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B
mm10_v2_chr12_-_54695829_54695884	0.0690769	Homez	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr16_+_43235856_43235880	0.0578474	Homez	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr5_-_125434048_125434131	0.0577885	Homez	ENSMUST00000169485.1|Dhx37|ENSMUSG00000029480.9|DEAH (Asp-Glu-Ala-His) box polypeptide 37
mm10_v2_chr10_-_77515775_77515818	0.0560218	Homez	ENSMUST00000045454.7|Fam207a|ENSMUSG00000032977.8|family with sequence similarity 207, member A
mm10_v2_chr11_-_58330319_58330358	0.0532056	Homez	ENSMUST00000065533.2|Gm9900|ENSMUSG00000053218.2|predicted gene 9900
mm10_v2_chr2_-_170194033_170194064	0.0524536	Homez	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr9_-_51102062_51102085	0.0458483	Homez	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr6_-_34977999_34977999	0.0380244	Homez	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr13_+_58281183_58281196	0.0286767	Homez	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr4_-_40269778_40269850	0.0260026	Homez	ENSMUST00000042575.6|Topors|ENSMUSG00000036822.6|topoisomerase I binding, arginine/serine-rich
mm10_v2_chr3_-_100162364_100162414	0.0227393	Homez	ENSMUST00000052120.7|Wdr3|ENSMUSG00000033285.9|WD repeat domain 3
mm10_v2_chr12_-_20900867_20900867	0.0214817	Homez	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
mm10_v2_chr18_+_32837225_32837240	0.0187963	Homez	ENSMUST00000166214.1|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36 	ENSMUST00000053663.9|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36
mm10_v2_chr2_-_176144697_176144697	0.018405	Homez	ENSMUST00000178872.1|Gm2004|ENSMUSG00000095648.1|predicted gene 2004
mm10_v2_chr13_+_94788873_94788951	0.0174965	Homez	ENSMUST00000046644.5|Tbca|ENSMUSG00000042043.5|tubulin cofactor A
mm10_v2_chr1_+_93342854_93342854	0.013757	Homez	ENSMUST00000027494.4|Ppp1r7|ENSMUSG00000026275.7|protein phosphatase 1, regulatory (inhibitor) subunit 7
mm10_v2_chr4_+_156235999_156236051	0.0129093	Homez	ENSMUST00000179543.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae) 	ENSMUST00000179886.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae)
mm10_v2_chr18_+_7869159_7869209	0.00507294	Homez	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
