mm10_v2_chr9_+_53771499_53771535	3.84925	Isl2	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr10_-_77166545_77166556	3.46239	Isl2	ENSMUST00000081654.6|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr12_-_10900296_10900318	3.20172	Isl2	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr1_+_12718496_12718545	3.12632	Isl2	ENSMUST00000088585.3|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chr9_+_72806874_72806874	2.76265	Isl2	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr17_+_17402672_17402771	2.67442	Isl2	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr16_-_76403673_76403717	2.32149	Isl2	ENSMUST00000052867.7|Gm9843|ENSMUSG00000050299.7|predicted gene 9843
mm10_v2_chrX_-_60893430_60893440	2.16732	Isl2	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr17_-_48432723_48432741	2.0991	Isl2	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chrX_+_96455359_96455411	2.06116	Isl2	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr14_+_27039001_27039050	1.94879	Isl2	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr9_-_100506844_100506856	1.92773	Isl2	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr9_+_108560422_108560534	1.92392	Isl2	ENSMUST00000081111.8|Impdh2|ENSMUSG00000062867.8|inosine 5'-phosphate dehydrogenase 2
mm10_v2_chr12_+_109546409_109546493	1.89324	Isl2	ENSMUST00000143847.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr4_+_3940747_3940854	1.86429	Isl2	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr7_+_100159241_100159315	1.84447	Isl2	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr6_-_136941887_136941911	1.83568	Isl2	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr17_+_12119274_12119348	1.73489	Isl2	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chrX_+_136245065_136245102	1.7024	Isl2	ENSMUST00000048687.4|Wbp5|ENSMUSG00000042712.4|WW domain binding protein 5
mm10_v2_chr3_-_33082004_33082068	1.64673	Isl2	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr14_-_31323884_31323929	1.59359	Isl2	ENSMUST00000048603.7|Dnah1|ENSMUSG00000019027.7|dynein, axonemal, heavy chain 1
mm10_v2_chrX_+_164373363_164373378	1.51934	Isl2	ENSMUST00000033751.7|Figf|ENSMUSG00000031380.10|c-fos induced growth factor
mm10_v2_chr8_-_61902669_61902713	1.46844	Isl2	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr17_+_20570362_20570362	1.46579	Isl2	ENSMUST00000095633.3|Gm5145|ENSMUSG00000071273.3|predicted pseudogene 5145
mm10_v2_chr17_-_56005566_56005597	1.42828	Isl2	ENSMUST00000043785.6|Stap2|ENSMUSG00000038781.6|signal transducing adaptor family member 2
mm10_v2_chr15_+_16778101_16778101	1.41318	Isl2	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr10_-_61784014_61784147	1.40943	Isl2	ENSMUST00000020283.4|H2afy2|ENSMUSG00000020086.6|H2A histone family, member Y2
mm10_v2_chr17_-_26099257_26099259	1.40453	Isl2	ENSMUST00000053575.3|Gm8186|ENSMUSG00000049124.3|predicted gene 8186
mm10_v2_chr13_-_58354862_58354862	1.402	Isl2	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr17_-_53867041_53867041	1.39966	Isl2	ENSMUST00000061311.7|Mrps36-ps1|ENSMUSG00000021631.7|mitichondrial ribosomal protein S36, pseudogene 1
mm10_v2_chr19_+_25406661_25406699	1.39573	Isl2	ENSMUST00000146647.1|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr8_+_114133635_114133662	1.36842	Isl2	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr11_-_80779989_80780033	1.26807	Isl2	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr8_+_114133557_114133597	1.22272	Isl2	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr11_+_103649498_103649521	1.20642	Isl2	ENSMUST00000057870.2|Rprml|ENSMUSG00000046215.2|reprimo-like
mm10_v2_chr14_+_4198185_4198185	1.19715	Isl2	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr5_-_3647806_3648009	1.19233	Isl2	ENSMUST00000119783.1|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1 	ENSMUST00000007559.8|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1
mm10_v2_chr19_+_5490475_5490487	1.18968	Isl2	ENSMUST00000116560.2|Cfl1|ENSMUSG00000056201.6|cofilin 1, non-muscle
mm10_v2_chr10_-_63927434_63927434	1.17089	Isl2	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chr2_+_115581667_115581743	1.16592	Isl2	ENSMUST00000166472.1|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040 	ENSMUST00000110918.2|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040
mm10_v2_chr5_-_87490869_87490875	1.15711	Isl2	ENSMUST00000147854.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr8_+_121116163_121116177	1.15052	Isl2	ENSMUST00000054691.6|Foxc2|ENSMUSG00000046714.6|forkhead box C2
mm10_v2_chrY_-_1245753_1245766	1.11075	Isl2	ENSMUST00000154004.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr11_+_94327984_94328029	1.11019	Isl2	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr5_+_15516489_15516489	1.10842	Isl2	ENSMUST00000178227.1|Gm21847|ENSMUSG00000094230.1|predicted gene, 21847
mm10_v2_chr6_-_89595647_89595658	1.0975	Isl2	ENSMUST00000032172.8|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6 	ENSMUST00000113550.3|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6
mm10_v2_chr16_-_16829276_16829349	1.09064	Isl2	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr3_+_103171655_103171725	1.07423	Isl2	ENSMUST00000005830.8|Bcas2|ENSMUSG00000005687.8|breast carcinoma amplified sequence 2
mm10_v2_chr4_-_14621669_14621786	1.07286	Isl2	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr11_+_58171648_58171688	1.07044	Isl2	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr15_-_10485385_10485422	1.04989	Isl2	ENSMUST00000168690.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr7_+_28881656_28881718	1.04819	Isl2	ENSMUST00000066880.4|Capn12|ENSMUSG00000054083.7|calpain 12
mm10_v2_chr10_+_102158858_102158889	1.03372	Isl2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr14_+_5517172_5517172	1.0175	Isl2	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	1.0175	Isl2	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr1_-_9944103_9944127	1.01737	Isl2	ENSMUST00000182498.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182742.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182580.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6
mm10_v2_chr4_-_86669492_86669560	0.982952	Isl2	ENSMUST00000149700.1|Plin2|ENSMUSG00000028494.6|perilipin 2
mm10_v2_chr14_-_104522615_104522707	0.982214	Isl2	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr10_-_80918212_80918256	0.961366	Isl2	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr10_+_69208546_69208557	0.943762	Isl2	ENSMUST00000164034.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr2_+_163658370_163658510	0.921995	Isl2	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr1_+_110099295_110099295	0.917439	Isl2	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chrM_+_8600_8616	0.905084	Isl2	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr1_-_163289214_163289235	0.903466	Isl2	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr5_-_24902315_24902456	0.900564	Isl2	ENSMUST00000131486.1|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr3_-_9004422_9004439	0.897482	Isl2	ENSMUST00000063496.7|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr2_+_109917639_109917656	0.889832	Isl2	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr4_-_136053343_136053415	0.886238	Isl2	ENSMUST00000102536.4|Rpl11|ENSMUSG00000059291.9|ribosomal protein L11
mm10_v2_chr4_+_136172367_136172395	0.883757	Isl2	ENSMUST00000061721.5|E2f2|ENSMUSG00000018983.9|E2F transcription factor 2
mm10_v2_chrM_+_9452_9468	0.880355	Isl2	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr12_-_99883429_99883460	0.875484	Isl2	ENSMUST00000046485.3|Efcab11|ENSMUSG00000021176.5|EF-hand calcium binding domain 11
mm10_v2_chr9_-_90255927_90255943	0.871062	Isl2	ENSMUST00000144646.1|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B
mm10_v2_chr10_-_31445921_31445967	0.860831	Isl2	ENSMUST00000000305.5|Tpd52l1|ENSMUSG00000000296.7|tumor protein D52-like 1
mm10_v2_chr3_+_89459118_89459214	0.855602	Isl2	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr14_+_3667518_3667518	0.852198	Isl2	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr11_-_101278927_101279114	0.845188	Isl2	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr15_-_10485890_10485951	0.834352	Isl2	ENSMUST00000169050.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 	ENSMUST00000022855.5|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr1_-_72874877_72874891	0.829919	Isl2	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr14_-_7473073_7473073	0.813319	Isl2	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr15_+_84232030_84232043	0.805767	Isl2	ENSMUST00000023072.6|Parvb|ENSMUSG00000022438.6|parvin, beta
mm10_v2_chr11_+_69838514_69838567	0.805212	Isl2	ENSMUST00000133967.1|Tmem256|ENSMUSG00000070394.4|transmembrane protein 256 	ENSMUST00000094065.4|Tmem256|ENSMUSG00000070394.4|transmembrane protein 256
mm10_v2_chr17_+_78916473_78916509	0.804882	Isl2	ENSMUST00000063817.4|1110001A16Rik|ENSMUSG00000062691.4|RIKEN cDNA 1110001A16 gene 	ENSMUST00000180077.1|1110001A16Rik|ENSMUSG00000062691.4|RIKEN cDNA 1110001A16 gene
mm10_v2_chr14_-_6411578_6411578	0.804098	Isl2	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr1_-_128102412_128102485	0.798794	Isl2	ENSMUST00000112538.1|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3 	ENSMUST00000086614.5|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3
mm10_v2_chr12_+_87443896_87443946	0.798207	Isl2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chr14_+_3348089_3348089	0.797448	Isl2	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr1_-_185329331_185329401	0.787503	Isl2	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr19_-_44552831_44552831	0.772005	Isl2	ENSMUST00000166808.1|Gm20538|ENSMUSG00000091471.1|predicted gene 20538
mm10_v2_chr3_-_79841729_79841729	0.767917	Isl2	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr14_+_4871156_4871156	0.730843	Isl2	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr11_+_5520652_5520659	0.724967	Isl2	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr14_+_4741737_4741737	0.709386	Isl2	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr14_+_3428103_3428103	0.705306	Isl2	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr14_+_58893465_58893506	0.702787	Isl2	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr18_+_23753708_23753725	0.695551	Isl2	ENSMUST00000115830.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr15_-_35938186_35938246	0.681505	Isl2	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr11_-_82908360_82908411	0.678881	Isl2	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr14_+_4126066_4126066	0.672335	Isl2	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr13_+_48513570_48513570	0.660038	Isl2	ENSMUST00000065465.1|A830005F24Rik|ENSMUSG00000053181.1|RIKEN cDNA A830005F24 gene
mm10_v2_chr9_+_70012540_70012595	0.659554	Isl2	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr14_+_3825596_3825596	0.659474	Isl2	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr9_-_22117123_22117174	0.656627	Isl2	ENSMUST00000013966.6|Elof1|ENSMUSG00000013822.6|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm10_v2_chr15_-_100424092_100424173	0.654818	Isl2	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr9_-_102354685_102354699	0.644441	Isl2	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr14_-_5863663_5863663	0.615113	Isl2	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr14_-_6874257_6874257	0.612543	Isl2	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr10_-_13324160_13324242	0.610644	Isl2	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr4_-_14621494_14621506	0.597048	Isl2	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr3_+_83055516_83055565	0.596648	Isl2	ENSMUST00000150268.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 	ENSMUST00000122128.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm10_v2_chr15_-_35938009_35938178	0.59466	Isl2	ENSMUST00000156915.1|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr14_+_4665094_4665094	0.592179	Isl2	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr14_-_6266620_6266620	0.589938	Isl2	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr6_+_29859686_29859710	0.586862	Isl2	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr14_-_69707546_69707584	0.581873	Isl2	ENSMUST00000118374.1|R3hcc1|ENSMUSG00000034194.10|R3H domain and coiled-coil containing 1
mm10_v2_chr2_+_125136692_125136769	0.555669	Isl2	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr18_-_43477764_43477836	0.54468	Isl2	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr13_+_104229366_104229388	0.537044	Isl2	ENSMUST00000022227.6|Cenpk|ENSMUSG00000021714.8|centromere protein K
mm10_v2_chr14_+_4430992_4430992	0.530469	Isl2	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr1_-_172027269_172027313	0.527898	Isl2	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr14_-_6741430_6741430	0.523362	Isl2	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr15_-_100424208_100424219	0.520975	Isl2	ENSMUST00000154331.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr14_+_69347587_69347587	0.520692	Isl2	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr5_-_88675190_88675242	0.519818	Isl2	ENSMUST00000133532.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000150438.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr14_-_19569553_19569553	0.511336	Isl2	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr4_-_14621805_14621819	0.506152	Isl2	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr12_-_87444017_87444017	0.494146	Isl2	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr3_-_51408925_51408988	0.493328	Isl2	ENSMUST00000038108.6|Ndufc1|ENSMUSG00000037152.6|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1
mm10_v2_chr14_-_69707493_69707543	0.490963	Isl2	ENSMUST00000121142.1|R3hcc1|ENSMUSG00000034194.10|R3H domain and coiled-coil containing 1
mm10_v2_chr16_-_35939082_35939151	0.478509	Isl2	ENSMUST00000081933.7|Dtx3l|ENSMUSG00000049502.10|deltex 3-like (Drosophila) 	ENSMUST00000114885.1|Dtx3l|ENSMUSG00000049502.10|deltex 3-like (Drosophila)
mm10_v2_chr17_+_56613392_56613425	0.466464	Isl2	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr15_+_10486008_10486080	0.455319	Isl2	ENSMUST00000022856.8|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000100775.3|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000169519.1|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe)
mm10_v2_chr4_-_88722454_88722485	0.445987	Isl2	ENSMUST00000094993.2|Klhl9|ENSMUSG00000070923.4|kelch-like 9
mm10_v2_chr7_+_19119853_19119913	0.436925	Isl2	ENSMUST00000053109.3|Fbxo46|ENSMUSG00000050428.6|F-box protein 46
mm10_v2_chr7_+_126976338_126976400	0.418721	Isl2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr3_+_138374121_138374163	0.413892	Isl2	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr3_+_41563356_41563392	0.411876	Isl2	ENSMUST00000163764.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr13_+_67833235_67833235	0.385111	Isl2	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr1_+_45981548_45981548	0.362033	Isl2	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr2_-_73580288_73580353	0.353993	Isl2	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr18_-_34651703_34651741	0.348475	Isl2	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr3_-_62605140_62605140	0.320474	Isl2	ENSMUST00000058535.5|Gpr149|ENSMUSG00000043441.5|G protein-coupled receptor 149
mm10_v2_chr8_+_88118747_88118777	0.311404	Isl2	ENSMUST00000095214.3|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr4_+_47386216_47386265	0.30602	Isl2	ENSMUST00000107725.2|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr11_-_71004387_71004501	0.303226	Isl2	ENSMUST00000124464.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33 	ENSMUST00000108527.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm10_v2_chr10_+_94576254_94576270	0.277847	Isl2	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr1_+_156838915_156838978	0.276865	Isl2	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr8_+_107031218_107031229	0.272777	Isl2	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr18_-_36766198_36766237	0.272404	Isl2	ENSMUST00000061522.7|Dnd1|ENSMUSG00000044595.10|dead end homolog 1 (zebrafish)
mm10_v2_chr4_+_145510759_145510791	0.270684	Isl2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr17_+_85028347_85028404	0.267454	Isl2	ENSMUST00000024944.7|Slc3a1|ENSMUSG00000024131.7|solute carrier family 3, member 1
mm10_v2_chr15_-_37459327_37459380	0.264983	Isl2	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr2_-_150255591_150255591	0.263821	Isl2	ENSMUST00000063463.5|Gm21994|ENSMUSG00000074735.2|predicted gene 21994
mm10_v2_chr1_+_187215501_187215547	0.24564	Isl2	ENSMUST00000097443.3|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000065573.7|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000110943.2|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000044812.5|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr19_+_8802486_8802530	0.218351	Isl2	ENSMUST00000172175.1|Zbtb3|ENSMUSG00000071661.6|zinc finger and BTB domain containing 3
mm10_v2_chr10_-_127311740_127311786	0.217745	Isl2	ENSMUST00000037290.5|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase 	ENSMUST00000171564.1|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase
mm10_v2_chr4_+_147492417_147492417	0.213377	Isl2	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr1_-_139377094_139377110	0.199175	Isl2	ENSMUST00000131586.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila) 	ENSMUST00000145244.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr10_+_116143881_116143903	0.170586	Isl2	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr17_-_56036546_56036647	0.169715	Isl2	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr3_+_41024369_41024384	0.16547	Isl2	ENSMUST00000099121.3|Larp1b|ENSMUSG00000025762.8|La ribonucleoprotein domain family, member 1B
mm10_v2_chr4_+_105157339_105157354	0.149623	Isl2	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chrX_-_134111852_134111873	0.145349	Isl2	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr7_-_6730412_6730431	0.13849	Isl2	ENSMUST00000051209.4|Peg3|ENSMUSG00000002265.9|paternally expressed 3
mm10_v2_chr4_+_147507600_147507600	0.137286	Isl2	ENSMUST00000063704.7|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr1_+_132477361_132477412	0.131979	Isl2	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr8_-_9976294_9976335	0.103069	Isl2	ENSMUST00000095476.4|Lig4|ENSMUSG00000049717.8|ligase IV, DNA, ATP-dependent
mm10_v2_chr8_+_25911670_25911692	0.0893315	Isl2	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr5_+_146948640_146948716	0.0763344	Isl2	ENSMUST00000146511.1|Gtf3a|ENSMUSG00000016503.10|general transcription factor III A 	ENSMUST00000132102.1|Gtf3a|ENSMUSG00000016503.10|general transcription factor III A
mm10_v2_chr4_+_32623985_32624084	0.0590577	Isl2	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr8_+_64947177_64947255	0.0145963	Isl2	ENSMUST00000079896.7|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192 	ENSMUST00000026595.5|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192
mm10_v2_chr1_+_190928492_190928550	0.00187663	Isl2	ENSMUST00000066632.7|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila) 	ENSMUST00000110899.1|Angel2|ENSMUSG00000026634.10|angel homolog 2 (Drosophila)
mm10_v2_chr9_+_119341294_119341363	0.00057199	Isl2	ENSMUST00000039784.5|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A
