mm10_v2_chr5_-_134747241_134747264	8.29695	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000015138.9|Eln|ENSMUSG00000029675.9|elastin
mm10_v2_chr2_+_116067213_116067250	5.90413	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr5_-_62766153_62766246	5.73942	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr16_+_42907563_42907684	4.47678	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr2_-_116067391_116067444	4.07499	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr9_-_40346290_40346337	3.68524	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000121357.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr1_-_155417394_155417435	3.36583	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr3_-_49757257_49757316	3.24698	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr11_-_98053415_98053467	3.24684	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr12_-_83487708_83487729	3.09521	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr9_+_118478344_118478451	3.03478	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr9_+_118478182_118478212	2.92836	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr19_+_26749726_26749877	2.88376	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175842.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr1_+_104768510_104768529	2.70043	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr6_-_136171722_136171849	2.63288	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr14_-_118052235_118052253	2.61833	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr16_+_45093611_45093622	2.58735	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000099498.2|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chr1_-_155417283_155417323	2.4698	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr17_-_49564262_49564337	2.26401	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000057610.6|Daam2|ENSMUSG00000040260.7|dishevelled associated activator of morphogenesis 2
mm10_v2_chr8_+_54954728_54954820	2.2521	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr2_-_77703252_77703272	2.15528	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171063.1|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr3_+_66219909_66219927	1.99457	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr16_-_37384915_37384931	1.8249	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr18_+_57468478_57468541	1.71654	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chr10_+_39612934_39612934	1.65321	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr5_-_123141067_123141094	1.62116	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr3_+_86070915_86070915	1.58465	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr4_-_14621805_14621819	1.57055	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr7_+_126950518_126950584	1.55131	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106335.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2 	ENSMUST00000146017.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr18_-_37969742_37969782	1.49592	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000166148.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000163131.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000043437.7|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1
mm10_v2_chr5_-_62765618_62765656	1.44253	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr7_+_126950687_126950729	1.44035	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr11_-_87359011_87359081	1.3735	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr13_+_44121167_44121322	1.34999	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000163056.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083 	ENSMUST00000159595.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083
mm10_v2_chr15_-_8710734_8710764	1.34164	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_-_45117349_45117395	1.26312	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000176438.2|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr1_-_190170671_190170744	1.2038	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr16_-_74411292_74411430	1.18417	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr11_-_26210553_26210585	1.18197	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000101447.3|5730522E02Rik|ENSMUSG00000073101.3|RIKEN cDNA 5730522E02 gene
mm10_v2_chr10_-_25200110_25200178	1.16807	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr14_-_79771305_79771318	1.13646	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr1_-_158356258_158356313	1.10513	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr15_-_8710409_8710498	1.0961	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr6_-_126645784_126645801	1.04613	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr16_-_37384940_37384978	1.04571	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114781.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114780.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr7_+_126950837_126950966	1.03526	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106332.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr3_+_68572245_68572392	1.03364	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr6_+_63255971_63256036	1.01869	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr5_-_77115145_77115156	1.01411	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr3_+_62419668_62419668	0.986318	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr17_+_3397189_3397207	0.914496	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr3_+_151437887_151437914	0.910543	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr17_-_90088343_90088373	0.910366	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr9_+_45370185_45370208	0.900135	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000085939.6|Fxyd6|ENSMUSG00000066705.6|FXYD domain-containing ion transport regulator 6
mm10_v2_chr13_+_83732438_83732566	0.890324	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182701.1|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr12_+_49382791_49382883	0.859561	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000179669.1|Foxg1|ENSMUSG00000020950.9|forkhead box G1
mm10_v2_chr4_+_108719649_108719649	0.853138	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr17_+_75005523_75005568	0.847617	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr18_+_23415400_23415454	0.845884	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000115832.2|Dtna|ENSMUSG00000024302.9|dystrobrevin alpha 	ENSMUST00000047954.7|Dtna|ENSMUSG00000024302.9|dystrobrevin alpha
mm10_v2_chr7_-_73541738_73541758	0.799047	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr9_-_103222063_103222149	0.791612	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr15_-_66812593_66812649	0.777784	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100572.3|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr5_+_34999111_34999184	0.756422	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114283.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr19_+_26750939_26750967	0.752584	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr12_-_91849081_91849157	0.670352	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr2_+_71528657_71528683	0.666771	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr16_-_97170707_97170759	0.659253	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr2_+_22622183_22622205	0.636517	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr5_+_34999046_34999069	0.63101	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114281.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr5_+_34999070_34999086	0.629309	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114280.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr6_+_145934113_145934136	0.621872	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr7_-_45103747_45103822	0.596586	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr5_+_64812336_64812350	0.596085	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr17_-_29888570_29888629	0.593112	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chrX_+_166344692_166344770	0.568925	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr4_+_97777780_97777834	0.568788	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr5_+_13398688_13398726	0.561382	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000125629.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr6_+_125552948_125552980	0.5502	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr13_+_23574381_23574449	0.548043	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000090776.4|Hist1h2ad|ENSMUSG00000071478.4|histone cluster 1, H2ad
mm10_v2_chr15_+_25773985_25774042	0.532561	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr1_-_190170178_190170237	0.523725	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr2_+_70474923_70474923	0.522869	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr4_+_21848039_21848077	0.500264	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr2_+_20737306_20737321	0.490048	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr13_+_118714678_118714701	0.487167	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr2_-_79456750_79456761	0.471841	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr18_+_37819543_37819570	0.458942	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr7_-_81493725_81493783	0.428508	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000119121.1|Ap3b2|ENSMUSG00000062444.8|adaptor-related protein complex 3, beta 2 subunit
mm10_v2_chr10_-_53647080_53647080	0.413368	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr7_+_29071597_29071613	0.406713	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr9_+_32116040_32116136	0.405346	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr4_-_14621494_14621506	0.401485	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr2_+_73271925_73271939	0.391666	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr11_+_102285161_102285251	0.388978	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr13_+_16011851_16011949	0.376733	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042603.6|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr7_-_73537621_73537766	0.364578	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chrX_-_75416533_75416555	0.346855	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000033542.4|Mtcp1|ENSMUSG00000031200.10|mature T cell proliferation 1
mm10_v2_chr6_-_57535422_57535447	0.334267	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr3_-_94412883_94412890	0.333381	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000181305.1|1700040D17Rik|ENSMUSG00000097515.1|RIKEN cDNA 1700040D17 gene
mm10_v2_chr1_+_132298606_132298631	0.332562	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr13_+_42680565_42680623	0.328323	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr1_-_165934900_165935036	0.319915	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr10_+_127421124_127421203	0.309764	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr8_+_83666827_83666882	0.30925	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr15_-_11037968_11037968	0.295881	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000058007.5|Rxfp3|ENSMUSG00000060735.3|relaxin family peptide receptor 3
mm10_v2_chr11_+_23306910_23306937	0.295345	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000137823.1|Usp34|ENSMUSG00000056342.10|ubiquitin specific peptidase 34
mm10_v2_chr5_-_23616528_23616597	0.293534	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr2_+_106693185_106693278	0.292063	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr10_+_99263224_99263240	0.290531	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr13_+_80883403_80883422	0.278131	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chrM_+_11734_11757	0.273618	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr2_-_33086366_33086447	0.272886	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr4_+_154964117_154964147	0.272626	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000030931.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4 	ENSMUST00000070953.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4
mm10_v2_chr12_+_74297474_74297474	0.266843	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chrX_-_143933204_143933311	0.263767	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr10_+_115569986_115570035	0.261509	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000173620.1|A930009A15Rik|ENSMUSG00000092210.1|RIKEN cDNA A930009A15 gene
mm10_v2_chr4_-_155056784_155056827	0.256445	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000131173.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2
mm10_v2_chr2_-_6721606_6721629	0.255342	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000150624.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000142941.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000100429.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182879.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr11_+_116843278_116843278	0.251729	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106370.3|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr14_+_79515618_79515694	0.249186	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr1_-_152625212_152625220	0.245446	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr11_+_23306884_23306906	0.242531	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180046.1|Usp34|ENSMUSG00000056342.10|ubiquitin specific peptidase 34
mm10_v2_chr17_-_29007925_29007962	0.236166	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr17_+_45734506_45734630	0.230135	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr10_+_127420334_127420348	0.225229	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171434.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr8_+_4238815_4238886	0.224464	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr2_+_152754156_152754186	0.2216	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000010020.5|Cox4i2|ENSMUSG00000009876.7|cytochrome c oxidase subunit IV isoform 2
mm10_v2_chr10_+_18469958_18469981	0.218151	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr16_-_4880284_4880315	0.217707	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chrX_-_143933089_143933142	0.217551	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr12_+_111814170_111814245	0.215885	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021714.7|Zfyve21|ENSMUSG00000021286.7|zinc finger, FYVE domain containing 21
mm10_v2_chr8_+_4238733_4238767	0.20467	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr15_-_79285502_79285537	0.198043	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000165408.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr7_+_25681158_25681158	0.195155	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr10_+_127421208_127421235	0.193502	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr2_-_6721890_6721928	0.193012	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114927.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr11_-_119547744_119547759	0.185642	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr3_+_96268654_96268683	0.182151	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000098843.2|Hist2h3b|ENSMUSG00000074403.2|histone cluster 2, H3b
mm10_v2_chr5_+_14025305_14025327	0.167963	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000073957.6|Sema3e|ENSMUSG00000063531.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm10_v2_chr4_+_116720920_116721004	0.166735	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr12_-_48559971_48559971	0.161279	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169406.1|Gm1818|ENSMUSG00000091277.1|predicted gene 1818
mm10_v2_chrX_+_56454871_56454887	0.158565	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr14_-_108914237_108914257	0.155188	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr13_+_36117349_36117411	0.146474	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021857.5|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial) 	ENSMUST00000099582.2|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr1_-_87394721_87394734	0.144177	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000113212.3|Kcnj13|ENSMUSG00000079436.3|potassium inwardly-rectifying channel, subfamily J, member 13
mm10_v2_chr9_+_61372359_61372383	0.143737	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178113.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159386.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr7_+_102210335_102210445	0.134964	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000140631.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000120879.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000146996.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr15_+_21111452_21111452	0.134803	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000075132.6|Cdh12|ENSMUSG00000040452.8|cadherin 12
mm10_v2_chr13_-_23574196_23574229	0.133089	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000105106.1|Hist1h2bf|ENSMUSG00000069268.4|histone cluster 1, H2bf
mm10_v2_chr3_-_55055038_55055055	0.128901	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029368.2|Ccna1|ENSMUSG00000027793.2|cyclin A1
mm10_v2_chr14_+_53324632_53324632	0.118563	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chr3_+_32436151_32436151	0.116479	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr17_+_46161021_46161072	0.109167	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000024748.7|Gtpbp2|ENSMUSG00000023952.7|GTP binding protein 2 	ENSMUST00000172170.1|Gtpbp2|ENSMUSG00000023952.7|GTP binding protein 2
mm10_v2_chr7_+_103550368_103550368	0.107264	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr8_+_121116163_121116177	0.105574	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000054691.6|Foxc2|ENSMUSG00000046714.6|forkhead box C2
mm10_v2_chr8_-_120228221_120228297	0.098643	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr5_-_137684665_137684729	0.0984018	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chrM_+_2743_2761	0.09565	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr2_-_6722187_6722236	0.094369	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182657.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr3_+_55461758_55461961	0.0894523	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr13_-_73678005_73678026	0.0819391	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022105.7|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109680.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109679.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18
mm10_v2_chr16_-_45724600_45724619	0.0771014	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr2_-_64975762_64975795	0.0741945	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr18_-_24603464_24603530	0.0730123	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000154205.1|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr15_+_79690869_79690905	0.06885	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046463.8|Gtpbp1|ENSMUSG00000042535.8|GTP binding protein 1
mm10_v2_chr2_+_52038005_52038020	0.0684052	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000065927.5|Tnfaip6|ENSMUSG00000053475.5|tumor necrosis factor alpha induced protein 6
mm10_v2_chr9_+_96258697_96258711	0.0670263	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr8_+_56551090_56551143	0.0638362	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr1_-_172027251_172027268	0.0625721	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr5_-_122989260_122989306	0.0551278	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000118027.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr18_-_24603791_24603843	0.0537029	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000070726.3|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr9_+_113930934_113930987	0.0467201	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr8_+_107031218_107031229	0.0464352	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr15_+_92597104_92597121	0.0459637	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr4_-_126968124_126968154	0.0451129	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr11_-_97700327_97700497	0.0424617	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000018681.7|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chr7_+_64501949_64502048	0.0422824	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000138829.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr13_-_106847267_106847267	0.041912	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr8_-_84662841_84662859	0.0418733	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr3_-_146682410_146682522	0.0399304	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr13_-_113663670_113663681	0.0231936	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000054650.4|Hspb3|ENSMUSG00000051456.4|heat shock protein 3
mm10_v2_chr13_+_75707484_75707510	0.0140734	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr12_-_111813834_111813858	0.0124159	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021715.5|Xrcc3|ENSMUSG00000021287.6|X-ray repair complementing defective repair in Chinese hamster cells 3
mm10_v2_chr1_-_52190901_52190915	0.0054414	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000156887.1|Gls|ENSMUSG00000026103.8|glutaminase 	ENSMUST00000129107.1|Gls|ENSMUSG00000026103.8|glutaminase
mm10_v2_chr5_-_137531204_137531297	0.0045922	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr5_-_122989086_122989111	0.00156763	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046073.9|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
