mm10_v2_chrY_+_1010543_1010613	0.93627	Crx_Gsc	ENSMUST00000091197.3|Eif2s3y|ENSMUSG00000069049.5|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm10_v2_chr7_-_103843154_103843169	0.715409	Crx_Gsc	ENSMUST00000063957.4|Hbb-bh1|ENSMUSG00000052217.5|hemoglobin Z, beta-like embryonic chain
mm10_v2_chr4_+_74013442_74013674	0.486288	Crx_Gsc	ENSMUST00000098006.2|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3 	ENSMUST00000084474.5|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3
mm10_v2_chr1_+_109983006_109983006	0.41827	Crx_Gsc	ENSMUST00000145188.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr14_-_87141114_87141148	0.393399	Crx_Gsc	ENSMUST00000168889.1|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr14_-_87141206_87141239	0.352043	Crx_Gsc	ENSMUST00000022599.7|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr5_+_77265454_77265549	0.350693	Crx_Gsc	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr1_-_138848576_138848603	0.343416	Crx_Gsc	ENSMUST00000112030.2|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chr13_+_110395041_110395057	0.316958	Crx_Gsc	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr13_-_66227573_66227573	0.310518	Crx_Gsc	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chrX_+_52791179_52791201	0.284964	Crx_Gsc	ENSMUST00000101588.1|Ccdc160|ENSMUSG00000073207.1|coiled-coil domain containing 160
mm10_v2_chr14_-_19977249_19977253	0.282555	Crx_Gsc	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr11_+_96464587_96464637	0.278828	Crx_Gsc	ENSMUST00000103154.4|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000100521.3|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000100519.4|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000071510.7|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1 	ENSMUST00000107662.2|Skap1|ENSMUSG00000057058.10|src family associated phosphoprotein 1
mm10_v2_chr1_-_189688074_189688098	0.273668	Crx_Gsc	ENSMUST00000171929.1|Cenpf|ENSMUSG00000026605.8|centromere protein F 	ENSMUST00000165962.1|Cenpf|ENSMUSG00000026605.8|centromere protein F
mm10_v2_chr5_-_74068361_74068438	0.239332	Crx_Gsc	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr7_-_140082246_140082301	0.221888	Crx_Gsc	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr2_+_69722797_69722840	0.210777	Crx_Gsc	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr12_-_69357120_69357181	0.20565	Crx_Gsc	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr18_-_74207771_74207818	0.198602	Crx_Gsc	ENSMUST00000040188.8|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1 	ENSMUST00000177604.1|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1
mm10_v2_chr14_-_19977151_19977204	0.187251	Crx_Gsc	ENSMUST00000055100.7|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2 	ENSMUST00000162425.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr11_-_68927049_68927101	0.179305	Crx_Gsc	ENSMUST00000038932.7|Odf4|ENSMUSG00000032921.7|outer dense fiber of sperm tails 4
mm10_v2_chr14_-_19977040_19977059	0.177331	Crx_Gsc	ENSMUST00000159028.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr1_+_55131253_55131302	0.175819	Crx_Gsc	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr1_-_52490736_52490736	0.175476	Crx_Gsc	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chrX_-_103186618_103186671	0.163019	Crx_Gsc	ENSMUST00000121720.1|Nap1l2|ENSMUSG00000082229.1|nucleosome assembly protein 1-like 2
mm10_v2_chr9_+_109051090_109051104	0.160995	Crx_Gsc	ENSMUST00000059097.8|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis)
mm10_v2_chr11_-_40733373_40733442	0.158376	Crx_Gsc	ENSMUST00000020579.8|Hmmr|ENSMUSG00000020330.10|hyaluronan mediated motility receptor (RHAMM)
mm10_v2_chr1_-_154725920_154725920	0.157334	Crx_Gsc	ENSMUST00000004214.8|Cacna1e|ENSMUSG00000004110.8|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm10_v2_chr6_+_113531675_113531721	0.153666	Crx_Gsc	ENSMUST00000036340.5|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2 	ENSMUST00000101051.2|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2
mm10_v2_chr15_-_64382908_64382936	0.151583	Crx_Gsc	ENSMUST00000177374.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000023008.9|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110115.2|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110114.3|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr2_+_69861562_69861584	0.141624	Crx_Gsc	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chrX_-_75578188_75578247	0.139864	Crx_Gsc	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr7_-_4532419_4532470	0.135025	Crx_Gsc	ENSMUST00000094897.4|Dnaaf3|ENSMUSG00000055809.7|dynein, axonemal assembly factor 3
mm10_v2_chr1_+_166254095_166254156	0.134768	Crx_Gsc	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr15_-_79254737_79254764	0.133278	Crx_Gsc	ENSMUST00000039752.3|Slc16a8|ENSMUSG00000032988.3|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm10_v2_chr10_+_90576872_90576992	0.13311	Crx_Gsc	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr8_-_54724474_54724504	0.131087	Crx_Gsc	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr17_-_35132050_35132050	0.130818	Crx_Gsc	ENSMUST00000025249.6|Apom|ENSMUSG00000024391.7|apolipoprotein M
mm10_v2_chr1_+_109982710_109982710	0.130547	Crx_Gsc	ENSMUST00000112701.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr10_+_80930071_80930091	0.129203	Crx_Gsc	ENSMUST00000015456.8|Gadd45b|ENSMUSG00000015312.8|growth arrest and DNA-damage-inducible 45 beta
mm10_v2_chr2_-_24763047_24763153	0.128504	Crx_Gsc	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr13_+_108046411_108046424	0.12473	Crx_Gsc	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr2_+_69861638_69861686	0.121765	Crx_Gsc	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr7_-_133123770_133123876	0.119456	Crx_Gsc	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr19_+_5366764_5366851	0.118788	Crx_Gsc	ENSMUST00000025759.7|Eif1ad|ENSMUSG00000024841.7|eukaryotic translation initiation factor 1A domain containing
mm10_v2_chr4_+_21727695_21727716	0.116265	Crx_Gsc	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr14_+_65968483_65968651	0.116158	Crx_Gsc	ENSMUST00000022616.6|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chr14_-_20181773_20181790	0.113098	Crx_Gsc	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr2_+_172550991_172551043	0.111906	Crx_Gsc	ENSMUST00000170744.1|Tfap2c|ENSMUSG00000028640.5|transcription factor AP-2, gamma
mm10_v2_chr11_+_104231390_104231453	0.111225	Crx_Gsc	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr2_+_65845767_65845799	0.111099	Crx_Gsc	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr16_-_55283237_55283287	0.110239	Crx_Gsc	ENSMUST00000036412.3|Zpld1|ENSMUSG00000064310.4|zona pellucida like domain containing 1
mm10_v2_chr8_-_54724317_54724388	0.109429	Crx_Gsc	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr2_-_164404606_164404621	0.106579	Crx_Gsc	ENSMUST00000109359.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000109358.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000103103.3|Matn4|ENSMUSG00000016995.11|matrilin 4
mm10_v2_chr7_-_134938264_134938430	0.105668	Crx_Gsc	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr13_+_98354234_98354250	0.103859	Crx_Gsc	ENSMUST00000105098.3|Foxd1|ENSMUSG00000078302.3|forkhead box D1
mm10_v2_chr6_-_34977999_34977999	0.103471	Crx_Gsc	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr7_+_44384604_44384674	0.101775	Crx_Gsc	ENSMUST00000130707.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000130844.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr2_+_102658640_102658669	0.101084	Crx_Gsc	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr10_+_82378593_82378593	0.0975501	Crx_Gsc	ENSMUST00000165906.1|Gm4924|ENSMUSG00000073427.3|predicted gene 4924
mm10_v2_chr9_+_64179289_64179349	0.0971167	Crx_Gsc	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr7_-_4752972_4753094	0.0964121	Crx_Gsc	ENSMUST00000183971.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182173.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182738.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000184143.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182111.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000182048.1|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2 	ENSMUST00000063324.7|Cox6b2|ENSMUSG00000051811.8|cytochrome c oxidase subunit VIb polypeptide 2
mm10_v2_chr4_+_120854786_120854843	0.0962215	Crx_Gsc	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr1_+_150392794_150392849	0.095252	Crx_Gsc	ENSMUST00000124973.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr1_+_178187721_178187847	0.0937672	Crx_Gsc	ENSMUST00000159284.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr11_-_70459957_70459984	0.093222	Crx_Gsc	ENSMUST00000019064.2|Cxcl16|ENSMUSG00000018920.5|chemokine (C-X-C motif) ligand 16
mm10_v2_chr1_+_128244122_128244181	0.0928075	Crx_Gsc	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr16_+_52031549_52031570	0.0907705	Crx_Gsc	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr11_-_29247208_29247409	0.0869637	Crx_Gsc	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr17_+_55445550_55445701	0.0850253	Crx_Gsc	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr1_-_126738167_126738230	0.083524	Crx_Gsc	ENSMUST00000160693.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr12_+_79130777_79130816	0.0814571	Crx_Gsc	ENSMUST00000021550.6|Arg2|ENSMUSG00000021125.6|arginase type II
mm10_v2_chr10_+_127642975_127643034	0.0813347	Crx_Gsc	ENSMUST00000092074.5|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6 	ENSMUST00000120279.1|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6
mm10_v2_chr10_-_99126321_99126321	0.0802423	Crx_Gsc	ENSMUST00000060761.5|Phxr2|ENSMUSG00000055108.5|per-hexamer repeat gene 2
mm10_v2_chr13_+_54789500_54789645	0.0775272	Crx_Gsc	ENSMUST00000163915.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000099503.3|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000171859.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr9_-_50617228_50617289	0.0769643	Crx_Gsc	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr8_+_127447669_127447746	0.0765015	Crx_Gsc	ENSMUST00000159511.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr11_+_11115784_11115851	0.0764597	Crx_Gsc	ENSMUST00000056344.4|Vwc2|ENSMUSG00000050830.11|von Willebrand factor C domain containing 2
mm10_v2_chr10_-_93891141_93891202	0.0758987	Crx_Gsc	ENSMUST00000180840.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr2_+_163225363_163225469	0.0758619	Crx_Gsc	ENSMUST00000099110.3|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2 	ENSMUST00000165937.1|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2
mm10_v2_chr12_+_55124528_55124528	0.0757925	Crx_Gsc	ENSMUST00000177768.1|Fam177a|ENSMUSG00000095595.1|family with sequence similarity 177, member A
mm10_v2_chr19_+_3767397_3767523	0.0740783	Crx_Gsc	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr17_-_10320229_10320346	0.0739955	Crx_Gsc	ENSMUST00000053066.6|Qk|ENSMUSG00000044407.6|quaking
mm10_v2_chr11_-_17008647_17008702	0.073632	Crx_Gsc	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr10_+_128267997_128267997	0.0736241	Crx_Gsc	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr7_-_15879844_15879968	0.0733412	Crx_Gsc	ENSMUST00000172758.1|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene 	ENSMUST00000044434.6|Crx|ENSMUSG00000041578.9|cone-rod homeobox containing gene
mm10_v2_chr2_+_120476911_120476976	0.0733148	Crx_Gsc	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr5_-_110448486_110448519	0.0730953	Crx_Gsc	ENSMUST00000069483.5|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr10_-_77969804_77969854	0.0724955	Crx_Gsc	ENSMUST00000105399.1|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2 	ENSMUST00000105401.2|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2
mm10_v2_chr3_+_28781305_28781344	0.0721612	Crx_Gsc	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr13_-_8858762_8858829	0.0720958	Crx_Gsc	ENSMUST00000176329.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr5_+_12383156_12383177	0.0707998	Crx_Gsc	ENSMUST00000030868.6|Sema3d|ENSMUSG00000040254.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm10_v2_chr7_-_44986313_44986492	0.0706242	Crx_Gsc	ENSMUST00000045325.6|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000085387.4|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107840.1|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107843.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107842.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1
mm10_v2_chr12_+_87266696_87266760	0.0690965	Crx_Gsc	ENSMUST00000021425.6|Ahsa1|ENSMUSG00000021037.6|AHA1, activator of heat shock protein ATPase 1
mm10_v2_chr19_-_43752924_43753001	0.0680924	Crx_Gsc	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr2_+_65845833_65845850	0.0675701	Crx_Gsc	ENSMUST00000053910.3|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr18_+_42511496_42511521	0.0666313	Crx_Gsc	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr9_-_13826946_13826972	0.0655668	Crx_Gsc	ENSMUST00000147115.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr10_-_78487842_78487842	0.0650403	Crx_Gsc	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr11_+_29718563_29718753	0.0646095	Crx_Gsc	ENSMUST00000060992.5|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr10_-_127751707_127751737	0.0644287	Crx_Gsc	ENSMUST00000079692.5|Gpr182|ENSMUSG00000058396.7|G protein-coupled receptor 182
mm10_v2_chrX_-_85776606_85776653	0.0641953	Crx_Gsc	ENSMUST00000142152.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000156390.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000113978.2|Gyk|ENSMUSG00000025059.10|glycerol kinase
mm10_v2_chr4_+_12906838_12906881	0.0625829	Crx_Gsc	ENSMUST00000143186.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing 	ENSMUST00000183345.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing
mm10_v2_chr19_-_12765447_12765632	0.0617985	Crx_Gsc	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr10_+_83543941_83544007	0.0616234	Crx_Gsc	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr11_+_49203465_49203524	0.0610833	Crx_Gsc	ENSMUST00000150284.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000109197.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62 	ENSMUST00000151228.1|Zfp62|ENSMUSG00000046311.7|zinc finger protein 62
mm10_v2_chr14_-_105177280_105177334	0.060863	Crx_Gsc	ENSMUST00000100327.3|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26 	ENSMUST00000022715.7|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr4_+_21727726_21727790	0.0606886	Crx_Gsc	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr19_+_43689672_43689695	0.0606444	Crx_Gsc	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr5_-_5694559_5694581	0.0601227	Crx_Gsc	ENSMUST00000115426.2|Steap2|ENSMUSG00000015653.7|six transmembrane epithelial antigen of prostate 2
mm10_v2_chr4_+_11558914_11558979	0.0598682	Crx_Gsc	ENSMUST00000178703.1|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000095145.5|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000108306.2|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000070755.6|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae)
mm10_v2_chr9_-_95750335_95750368	0.0550468	Crx_Gsc	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chr14_-_8172986_8173003	0.0532806	Crx_Gsc	ENSMUST00000022268.8|Pdhb|ENSMUSG00000021748.8|pyruvate dehydrogenase (lipoamide) beta
mm10_v2_chr5_+_117120120_117120180	0.053031	Crx_Gsc	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr4_+_84884418_84884465	0.0527275	Crx_Gsc	ENSMUST00000169371.2|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr8_-_94838255_94838358	0.0525005	Crx_Gsc	ENSMUST00000161762.1|Ciapin1|ENSMUSG00000031781.7|cytokine induced apoptosis inhibitor 1 	ENSMUST00000162538.1|Ciapin1|ENSMUSG00000031781.7|cytokine induced apoptosis inhibitor 1
mm10_v2_chr13_+_54789377_54789497	0.051306	Crx_Gsc	ENSMUST00000026993.7|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000131692.2|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000163796.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr18_+_3471630_3471630	0.0506319	Crx_Gsc	ENSMUST00000179907.1|G430049J08Rik|ENSMUSG00000096528.1|RIKEN cDNA G430049J08 gene
mm10_v2_chr1_-_163403627_163403679	0.0498513	Crx_Gsc	ENSMUST00000045138.4|Gorab|ENSMUSG00000040124.4|golgin, RAB6-interacting
mm10_v2_chr9_+_13827708_13827781	0.0495527	Crx_Gsc	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr1_-_165194310_165194433	0.0470404	Crx_Gsc	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr9_-_13827029_13827129	0.0469914	Crx_Gsc	ENSMUST00000148086.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57 	ENSMUST00000034398.5|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr17_+_37002527_37002569	0.0468935	Crx_Gsc	ENSMUST00000174747.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr10_+_111972664_111972805	0.0464837	Crx_Gsc	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr11_-_69579320_69579352	0.04613	Crx_Gsc	ENSMUST00000048139.5|Wrap53|ENSMUSG00000041346.5|WD repeat containing, antisense to Trp53
mm10_v2_chr5_-_92278155_92278171	0.046113	Crx_Gsc	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr5_-_149053038_149053053	0.0452622	Crx_Gsc	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr10_-_9901079_9901250	0.0443876	Crx_Gsc	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr17_+_35821675_35821693	0.0443203	Crx_Gsc	ENSMUST00000003635.6|Ier3|ENSMUSG00000003541.6|immediate early response 3
mm10_v2_chr19_-_32712287_32712336	0.0442651	Crx_Gsc	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr8_+_20136455_20136574	0.0441909	Crx_Gsc	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr14_-_20546440_20546481	0.0440272	Crx_Gsc	ENSMUST00000161989.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr7_-_103741322_103741322	0.0425689	Crx_Gsc	ENSMUST00000051346.2|Olfr629|ENSMUSG00000047545.2|olfactory receptor 629
mm10_v2_chr4_-_138913915_138913983	0.0423493	Crx_Gsc	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr1_-_13660476_13660554	0.042275	Crx_Gsc	ENSMUST00000027071.5|Lactb2|ENSMUSG00000025937.5|lactamase, beta 2
mm10_v2_chr4_+_84884276_84884314	0.0410965	Crx_Gsc	ENSMUST00000047023.6|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr12_+_101975965_101976004	0.0393041	Crx_Gsc	ENSMUST00000047357.8|Cpsf2|ENSMUSG00000041781.8|cleavage and polyadenylation specific factor 2
mm10_v2_chr7_-_44257378_44257378	0.0384264	Crx_Gsc	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr14_-_105177263_105177277	0.0379473	Crx_Gsc	ENSMUST00000163499.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr5_-_103977360_103977403	0.0378314	Crx_Gsc	ENSMUST00000048118.8|Hsd17b13|ENSMUSG00000034528.9|hydroxysteroid (17-beta) dehydrogenase 13
mm10_v2_chr11_-_4095344_4095445	0.0374697	Crx_Gsc	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr6_+_117900311_117900349	0.0372384	Crx_Gsc	ENSMUST00000177743.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F 	ENSMUST00000167182.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr13_-_21832194_21832198	0.0360656	Crx_Gsc	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr7_+_82335732_82335732	0.0355676	Crx_Gsc	ENSMUST00000173287.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr9_+_95954744_95954783	0.0354202	Crx_Gsc	ENSMUST00000034981.7|Xrn1|ENSMUSG00000032410.7|5'-3' exoribonuclease 1
mm10_v2_chr17_-_87265866_87265935	0.0347712	Crx_Gsc	ENSMUST00000145895.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000129616.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000155904.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000151155.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000144236.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000024963.3|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2
mm10_v2_chr11_-_109722214_109722289	0.0341019	Crx_Gsc	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chr17_-_28441718_28441732	0.0340076	Crx_Gsc	ENSMUST00000153744.1|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr17_+_29032664_29032681	0.0336463	Crx_Gsc	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr8_-_79711631_79711740	0.0335605	Crx_Gsc	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr8_+_123411424_123411562	0.0334164	Crx_Gsc	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr5_+_9100681_9100778	0.0332763	Crx_Gsc	ENSMUST00000115365.1|Tmem243|ENSMUSG00000079659.1|transmembrane protein 243, mitochondrial
mm10_v2_chr9_+_87144285_87144343	0.0330456	Crx_Gsc	ENSMUST00000113149.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000143779.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000179313.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000049457.7|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000153444.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2
mm10_v2_chr14_-_20546512_20546582	0.0325676	Crx_Gsc	ENSMUST00000022355.4|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000161445.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000159027.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chrM_+_7759_7927	0.0322713	Crx_Gsc	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr4_-_12087912_12088011	0.0322468	Crx_Gsc	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr10_-_93889758_93889826	0.0314719	Crx_Gsc	ENSMUST00000181091.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000181217.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000047910.8|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000180688.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr11_+_96789213_96789249	0.0309314	Crx_Gsc	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr2_-_101883010_101883023	0.0305148	Crx_Gsc	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr11_+_96789149_96789206	0.030026	Crx_Gsc	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr11_-_86257518_86257550	0.029647	Crx_Gsc	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr5_-_123721007_123721062	0.0287546	Crx_Gsc	ENSMUST00000031376.7|Zcchc8|ENSMUSG00000029427.7|zinc finger, CCHC domain containing 8
mm10_v2_chr2_+_125247190_125247287	0.028194	Crx_Gsc	ENSMUST00000082122.7|Dut|ENSMUSG00000027203.9|deoxyuridine triphosphatase
mm10_v2_chr9_-_106891401_106891438	0.0278139	Crx_Gsc	ENSMUST00000069036.7|Manf|ENSMUSG00000032575.10|mesencephalic astrocyte-derived neurotrophic factor
mm10_v2_chr5_-_137613759_137613785	0.027151	Crx_Gsc	ENSMUST00000155251.1|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein 	ENSMUST00000124693.1|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein
mm10_v2_chr18_-_70141568_70141622	0.0266784	Crx_Gsc	ENSMUST00000121693.1|Rab27b|ENSMUSG00000024511.9|RAB27b, member RAS oncogene family
mm10_v2_chr2_-_32381909_32381938	0.0266562	Crx_Gsc	ENSMUST00000048792.4|1110008P14Rik|ENSMUSG00000039195.4|RIKEN cDNA 1110008P14 gene
mm10_v2_chr16_+_17208135_17208135	0.0266517	Crx_Gsc	ENSMUST00000169803.1|Rimbp3|ENSMUSG00000071636.5|RIMS binding protein 3
mm10_v2_chr11_-_120598346_120598405	0.0263892	Crx_Gsc	ENSMUST00000026125.2|Alyref|ENSMUSG00000025134.2|Aly/REF export factor
mm10_v2_chr3_+_85915722_85915722	0.0261447	Crx_Gsc	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr14_+_50955992_50956169	0.0253675	Crx_Gsc	ENSMUST00000095925.4|Pnp2|ENSMUSG00000068417.7|purine-nucleoside phosphorylase 2
mm10_v2_chr1_+_86064619_86064648	0.0241058	Crx_Gsc	ENSMUST00000027432.8|Psmd1|ENSMUSG00000026229.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm10_v2_chr10_-_4432312_4432388	0.0236899	Crx_Gsc	ENSMUST00000126102.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000131853.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000042251.4|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr13_+_12395362_12395415	0.0235907	Crx_Gsc	ENSMUST00000059270.8|Heatr1|ENSMUSG00000050244.8|HEAT repeat containing 1
mm10_v2_chr1_-_155417283_155417323	0.0235294	Crx_Gsc	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr2_+_174284312_174284326	0.0234467	Crx_Gsc	ENSMUST00000109095.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109096.2|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000180362.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr5_-_96161990_96162097	0.023437	Crx_Gsc	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr3_-_89365233_89365253	0.022773	Crx_Gsc	ENSMUST00000070820.6|Dcst1|ENSMUSG00000042672.9|DC-STAMP domain containing 1
mm10_v2_chr14_-_63543931_63543991	0.0226727	Crx_Gsc	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr9_-_50617428_50617467	0.0224503	Crx_Gsc	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr11_+_3514861_3514894	0.0216513	Crx_Gsc	ENSMUST00000094469.4|Selm|ENSMUSG00000075702.9|selenoprotein M
mm10_v2_chr1_-_44218952_44218961	0.0214426	Crx_Gsc	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
mm10_v2_chr10_-_53379816_53379858	0.0212511	Crx_Gsc	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr12_-_115964196_115964196	0.0211509	Crx_Gsc	ENSMUST00000103550.2|Ighv1-83|ENSMUSG00000096466.1|immunoglobulin heavy variable 1-83
mm10_v2_chr6_-_69400097_69400097	0.0211033	Crx_Gsc	ENSMUST00000177795.1|Igkv4-62|ENSMUSG00000094262.1|immunoglobulin kappa variable 4-62
mm10_v2_chr9_-_121839460_121839465	0.0204878	Crx_Gsc	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr9_+_44334685_44334715	0.0203538	Crx_Gsc	ENSMUST00000052686.2|H2afx|ENSMUSG00000049932.2|H2A histone family, member X
mm10_v2_chr17_+_87635974_87635990	0.019274	Crx_Gsc	ENSMUST00000053577.8|Epcam|ENSMUSG00000045394.8|epithelial cell adhesion molecule
mm10_v2_chrX_-_100626568_100626611	0.0192403	Crx_Gsc	ENSMUST00000015812.5|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr17_+_37002510_37002525	0.019007	Crx_Gsc	ENSMUST00000069250.7|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr7_-_114276107_114276125	0.0186135	Crx_Gsc	ENSMUST00000033008.9|Psma1|ENSMUSG00000030751.11|proteasome (prosome, macropain) subunit, alpha type 1
mm10_v2_chr13_+_21811737_21811754	0.0185285	Crx_Gsc	ENSMUST00000104941.2|Hist1h4m|ENSMUSG00000069306.4|histone cluster 1, H4m
mm10_v2_chr7_-_144678851_144678908	0.0181295	Crx_Gsc	ENSMUST00000131731.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr10_+_94198955_94199043	0.0177751	Crx_Gsc	ENSMUST00000020209.9|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENSMUST00000179990.1|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm10_v2_chrX_+_7919816_7919905	0.0176824	Crx_Gsc	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr6_+_86404219_86404240	0.0176264	Crx_Gsc	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr5_-_92435219_92435235	0.017079	Crx_Gsc	ENSMUST00000038514.8|Nup54|ENSMUSG00000034826.8|nucleoporin 54
mm10_v2_chr5_+_143758293_143758363	0.0169083	Crx_Gsc	ENSMUST00000180951.1|D130017N08Rik|ENSMUSG00000097287.1|RIKEN cDNA D130017N08 gene
mm10_v2_chr8_-_94876269_94876321	0.016659	Crx_Gsc	ENSMUST00000046461.7|Dok4|ENSMUSG00000040631.7|docking protein 4
mm10_v2_chr12_-_80260356_80260371	0.0164402	Crx_Gsc	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr7_-_141435327_141435397	0.0161883	Crx_Gsc	ENSMUST00000138865.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr8_-_107403197_107403213	0.0161272	Crx_Gsc	ENSMUST00000003947.8|Nqo1|ENSMUSG00000003849.8|NAD(P)H dehydrogenase, quinone 1
mm10_v2_chr19_-_5388656_5388703	0.016096	Crx_Gsc	ENSMUST00000044207.4|Sart1|ENSMUSG00000039148.4|squamous cell carcinoma antigen recognized by T cells 1
mm10_v2_chr13_-_92354943_92355025	0.0158007	Crx_Gsc	ENSMUST00000022220.6|Msh3|ENSMUSG00000014850.9|mutS homolog 3 (E. coli)
mm10_v2_chr2_+_181864337_181864438	0.0156128	Crx_Gsc	ENSMUST00000039551.8|Polr3k|ENSMUSG00000038628.8|polymerase (RNA) III (DNA directed) polypeptide K
mm10_v2_chrX_+_153139941_153140011	0.0155511	Crx_Gsc	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr6_+_86404336_86404473	0.0151895	Crx_Gsc	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr1_+_134560157_134560180	0.0151147	Crx_Gsc	ENSMUST00000047714.7|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr8_+_45975514_45975558	0.0150687	Crx_Gsc	ENSMUST00000034051.6|Ufsp2|ENSMUSG00000031634.6|UFM1-specific peptidase 2
mm10_v2_chr8_+_85026833_85026899	0.015064	Crx_Gsc	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr11_-_116274197_116274217	0.0149085	Crx_Gsc	ENSMUST00000021133.9|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr9_+_88581036_88581036	0.0147042	Crx_Gsc	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr17_-_66519666_66519727	0.0145827	Crx_Gsc	ENSMUST00000167962.1|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family 	ENSMUST00000070538.4|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family
mm10_v2_chr1_+_178187417_178187713	0.0141994	Crx_Gsc	ENSMUST00000161075.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2 	ENSMUST00000027783.7|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr16_-_63864114_63864182	0.0141952	Crx_Gsc	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr2_+_102659213_102659281	0.0141415	Crx_Gsc	ENSMUST00000111213.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr6_+_86404257_86404319	0.0129178	Crx_Gsc	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr4_-_141053660_141053697	0.0123794	Crx_Gsc	ENSMUST00000040222.7|Crocc|ENSMUSG00000040860.10|ciliary rootlet coiled-coil, rootletin
mm10_v2_chr13_-_27582168_27582172	0.0122786	Crx_Gsc	ENSMUST00000006664.1|Prl8a1|ENSMUSG00000019756.4|prolactin family 8, subfamily a, member 1 	ENSMUST00000095926.1|Prl8a1|ENSMUSG00000019756.4|prolactin family 8, subfamily a, member 1
mm10_v2_chr9_-_60687459_60687672	0.0122002	Crx_Gsc	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr5_+_90891234_90891250	0.0112694	Crx_Gsc	ENSMUST00000031327.8|Cxcl1|ENSMUSG00000029380.10|chemokine (C-X-C motif) ligand 1
mm10_v2_chr1_-_34439672_34439672	0.0112207	Crx_Gsc	ENSMUST00000042493.8|Ccdc115|ENSMUSG00000042111.8|coiled-coil domain containing 115
mm10_v2_chr8_-_34107816_34107852	0.0105716	Crx_Gsc	ENSMUST00000118811.1|Dctn6|ENSMUSG00000031516.5|dynactin 6
mm10_v2_chr11_-_86257553_86257575	0.00965395	Crx_Gsc	ENSMUST00000132024.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000139285.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr17_+_25786566_25786584	0.00960612	Crx_Gsc	ENSMUST00000095500.4|Ccdc78|ENSMUSG00000071202.4|coiled-coil domain containing 78
mm10_v2_chr19_+_26605106_26605119	0.0094632	Crx_Gsc	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr1_+_74153981_74154003	0.00937094	Crx_Gsc	ENSMUST00000027372.7|Cxcr2|ENSMUSG00000026180.7|chemokine (C-X-C motif) receptor 2 	ENSMUST00000106899.2|Cxcr2|ENSMUSG00000026180.7|chemokine (C-X-C motif) receptor 2
mm10_v2_chr4_-_82859571_82859679	0.00907331	Crx_Gsc	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr8_-_105707933_105707933	0.00894885	Crx_Gsc	ENSMUST00000013299.9|Enkd1|ENSMUSG00000013155.9|enkurin domain containing 1
mm10_v2_chr19_-_7206234_7206316	0.00881492	Crx_Gsc	ENSMUST00000123594.1|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1 	ENSMUST00000025679.4|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1
mm10_v2_chr10_+_80855275_80855322	0.00865996	Crx_Gsc	ENSMUST00000035597.8|Sppl2b|ENSMUSG00000035206.9|signal peptide peptidase like 2B
mm10_v2_chr10_+_77622275_77622361	0.00858604	Crx_Gsc	ENSMUST00000174510.1|Ube2g2|ENSMUSG00000009293.11|ubiquitin-conjugating enzyme E2G 2 	ENSMUST00000172813.1|Ube2g2|ENSMUSG00000009293.11|ubiquitin-conjugating enzyme E2G 2
mm10_v2_chr10_+_75037066_75037100	0.00847155	Crx_Gsc	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr7_+_44384803_44384868	0.00843003	Crx_Gsc	ENSMUST00000120262.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr7_-_43533171_43533209	0.00818347	Crx_Gsc	ENSMUST00000004728.5|Cd33|ENSMUSG00000004609.5|CD33 antigen 	ENSMUST00000039861.5|Cd33|ENSMUSG00000004609.5|CD33 antigen
mm10_v2_chr11_-_53430417_53430434	0.00812213	Crx_Gsc	ENSMUST00000109019.1|Uqcrq|ENSMUSG00000044894.8|ubiquinol-cytochrome c reductase, complex III subunit VII
mm10_v2_chr8_+_106150359_106150417	0.00712318	Crx_Gsc	ENSMUST00000034377.6|Pla2g15|ENSMUSG00000031903.6|phospholipase A2, group XV
mm10_v2_chr4_+_65604984_65605052	0.00683656	Crx_Gsc	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr10_+_21295979_21296013	0.00603838	Crx_Gsc	ENSMUST00000020153.8|Hbs1l|ENSMUSG00000019977.9|Hbs1-like (S. cerevisiae) 	ENSMUST00000092674.6|Hbs1l|ENSMUSG00000019977.9|Hbs1-like (S. cerevisiae)
mm10_v2_chr11_-_115297510_115297519	0.00595181	Crx_Gsc	ENSMUST00000056153.7|Fads6|ENSMUSG00000044788.10|fatty acid desaturase domain family, member 6
mm10_v2_chr11_+_5520652_5520659	0.00584945	Crx_Gsc	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr10_-_39899238_39899238	0.00578402	Crx_Gsc	ENSMUST00000178563.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr10_-_56228636_56228695	0.00530907	Crx_Gsc	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr13_+_119462752_119462810	0.00527507	Crx_Gsc	ENSMUST00000026519.8|4833420G17Rik|ENSMUSG00000062822.7|RIKEN cDNA 4833420G17 gene
mm10_v2_chr2_+_91054054_91054114	0.00506622	Crx_Gsc	ENSMUST00000002171.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3 	ENSMUST00000111441.3|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr11_+_80383279_80383304	0.00471668	Crx_Gsc	ENSMUST00000165565.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207 	ENSMUST00000017567.7|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr11_+_115475645_115475727	0.0046426	Crx_Gsc	ENSMUST00000035240.6|Armc7|ENSMUSG00000057219.5|armadillo repeat containing 7
mm10_v2_chr3_+_142496924_142496939	0.00416512	Crx_Gsc	ENSMUST00000090127.2|Gbp5|ENSMUSG00000040264.8|guanylate binding protein 5
mm10_v2_chr1_-_150392719_150392762	0.00415518	Crx_Gsc	ENSMUST00000006167.6|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000094477.2|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000097547.3|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331
mm10_v2_chr17_-_24455265_24455345	0.00399477	Crx_Gsc	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr11_-_116694802_116694882	0.00351379	Crx_Gsc	ENSMUST00000079545.5|St6galnac2|ENSMUSG00000057286.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
mm10_v2_chr17_-_12992487_12992554	0.00309903	Crx_Gsc	ENSMUST00000159551.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein 	ENSMUST00000160781.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr8_+_79711792_79711827	0.00231536	Crx_Gsc	ENSMUST00000048147.7|Anapc10|ENSMUSG00000036977.7|anaphase promoting complex subunit 10
mm10_v2_chr2_+_91054009_91054038	0.00227239	Crx_Gsc	ENSMUST00000067663.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr2_+_30077684_30077684	0.00139762	Crx_Gsc	ENSMUST00000125346.1|Pkn3|ENSMUSG00000026785.8|protein kinase N3
mm10_v2_chr5_+_53590215_53590351	0.00107784	Crx_Gsc	ENSMUST00000037618.6|Rbpj|ENSMUSG00000039191.6|recombination signal binding protein for immunoglobulin kappa J region
mm10_v2_chr6_-_13608011_13608100	0.00104038	Crx_Gsc	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr10_-_127288999_127289035	0.000684997	Crx_Gsc	ENSMUST00000119078.1|Mbd6|ENSMUSG00000025409.8|methyl-CpG binding domain protein 6
mm10_v2_chr1_-_155417394_155417435	0.000646306	Crx_Gsc	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
