mm10_v2_chr17_+_35076902_35077073	12.3445	Hoxa11_Hoxc12	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr1_-_56978534_56978650	5.1133	Hoxa11_Hoxc12	ENSMUST00000177282.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr1_+_43730593_43730633	4.94217	Hoxa11_Hoxc12	ENSMUST00000027217.8|1500015O10Rik|ENSMUSG00000026051.8|RIKEN cDNA 1500015O10 gene
mm10_v2_chr6_+_108213086_108213123	4.27415	Hoxa11_Hoxc12	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr14_+_80000292_80000309	4.24041	Hoxa11_Hoxc12	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr17_+_6270475_6270475	3.29836	Hoxa11_Hoxc12	ENSMUST00000088940.4|Tmem181a|ENSMUSG00000038141.8|transmembrane protein 181A
mm10_v2_chr18_+_69346143_69346203	3.26797	Hoxa11_Hoxc12	ENSMUST00000114980.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr17_-_6477102_6477102	2.50911	Hoxa11_Hoxc12	ENSMUST00000167717.2|Tmem181b-ps|ENSMUSG00000079733.3|transmembrane protein 181B, pseudogene
mm10_v2_chr7_-_142661858_142661880	2.33483	Hoxa11_Hoxc12	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr13_+_16014457_16014475	2.28539	Hoxa11_Hoxc12	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr3_+_66219909_66219927	2.27322	Hoxa11_Hoxc12	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr4_+_136143497_136143497	2.14731	Hoxa11_Hoxc12	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr15_-_43869993_43870058	2.14433	Hoxa11_Hoxc12	ENSMUST00000067469.4|Tmem74|ENSMUSG00000054409.4|transmembrane protein 74
mm10_v2_chr5_+_66968961_66969132	2.07203	Hoxa11_Hoxc12	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr17_+_22361453_22361522	1.89089	Hoxa11_Hoxc12	ENSMUST00000149699.1|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000088765.2|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000072477.4|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000121315.1|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758
mm10_v2_chr16_-_57231434_57231509	1.88899	Hoxa11_Hoxc12	ENSMUST00000023431.6|Tbc1d23|ENSMUSG00000022749.6|TBC1 domain family, member 23
mm10_v2_chr19_+_58943413_58943431	1.69039	Hoxa11_Hoxc12	ENSMUST00000054280.6|Eno4|ENSMUSG00000048029.7|enolase 4
mm10_v2_chrX_+_41401128_41401200	1.6204	Hoxa11_Hoxc12	ENSMUST00000115103.2|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr18_+_37655891_37655915	1.54515	Hoxa11_Hoxc12	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr1_+_178529113_178529134	1.40354	Hoxa11_Hoxc12	ENSMUST00000161017.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr6_+_149141513_149141619	1.35825	Hoxa11_Hoxc12	ENSMUST00000047531.9|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000179873.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111548.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111547.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000134306.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20
mm10_v2_chrX_+_73064787_73064787	1.3521	Hoxa11_Hoxc12	ENSMUST00000060418.6|Pnma3|ENSMUSG00000046287.6|paraneoplastic antigen MA3
mm10_v2_chr13_-_23430826_23431022	1.30368	Hoxa11_Hoxc12	ENSMUST00000153753.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene 	ENSMUST00000141543.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene
mm10_v2_chr11_-_62457772_62457835	1.26222	Hoxa11_Hoxc12	ENSMUST00000127471.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chrX_+_41401304_41401427	1.20091	Hoxa11_Hoxc12	ENSMUST00000076349.5|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr8_-_69373914_69373914	1.19506	Hoxa11_Hoxc12	ENSMUST00000095282.1|Gm10311|ENSMUSG00000071083.1|predicted gene 10311
mm10_v2_chr16_-_74411776_74411792	1.13221	Hoxa11_Hoxc12	ENSMUST00000116586.2|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr14_-_34503323_34503345	1.10476	Hoxa11_Hoxc12	ENSMUST00000171343.1|Bmpr1a|ENSMUSG00000021796.8|bone morphogenetic protein receptor, type 1A
mm10_v2_chr16_+_23224724_23224804	1.02416	Hoxa11_Hoxc12	ENSMUST00000023601.7|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr6_+_149141638_149141663	0.992786	Hoxa11_Hoxc12	ENSMUST00000166416.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111551.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20
mm10_v2_chr5_-_20951769_20951824	0.93487	Hoxa11_Hoxc12	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr8_+_104250925_104250940	0.922195	Hoxa11_Hoxc12	ENSMUST00000098464.4|Cklf|ENSMUSG00000054400.9|chemokine-like factor
mm10_v2_chr16_-_23225334_23225368	0.920646	Hoxa11_Hoxc12	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr11_-_95309557_95309602	0.910089	Hoxa11_Hoxc12	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr2_-_26516620_26516663	0.872255	Hoxa11_Hoxc12	ENSMUST00000132820.1|Notch1|ENSMUSG00000026923.9|notch 1
mm10_v2_chr7_+_4460687_4460730	0.861956	Hoxa11_Hoxc12	ENSMUST00000167298.1|Eps8l1|ENSMUSG00000006154.7|EPS8-like 1 	ENSMUST00000171445.1|Eps8l1|ENSMUSG00000006154.7|EPS8-like 1
mm10_v2_chrX_+_20364481_20364616	0.83024	Hoxa11_Hoxc12	ENSMUST00000033372.6|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115391.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115387.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human)
mm10_v2_chr4_-_129378116_129378116	0.787846	Hoxa11_Hoxc12	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr7_-_73537621_73537766	0.783106	Hoxa11_Hoxc12	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr5_+_32611171_32611245	0.77049	Hoxa11_Hoxc12	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr10_+_90071095_90071117	0.713795	Hoxa11_Hoxc12	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr13_-_12464925_12464949	0.710261	Hoxa11_Hoxc12	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr16_+_87354185_87354249	0.703003	Hoxa11_Hoxc12	ENSMUST00000054442.4|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118310.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000120284.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118115.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm10_v2_chr18_+_37333853_37333946	0.631577	Hoxa11_Hoxc12	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr1_-_189922338_189922363	0.572119	Hoxa11_Hoxc12	ENSMUST00000027897.7|Smyd2|ENSMUSG00000026603.7|SET and MYND domain containing 2
mm10_v2_chr13_+_109685994_109686156	0.526894	Hoxa11_Hoxc12	ENSMUST00000074103.5|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr4_+_107889813_107889908	0.525286	Hoxa11_Hoxc12	ENSMUST00000135454.1|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000106726.3|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000106727.3|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000119394.1|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000120473.1|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000125107.1|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene 	ENSMUST00000128474.1|0610037L13Rik|ENSMUSG00000028608.9|RIKEN cDNA 0610037L13 gene
mm10_v2_chr6_-_55681257_55681271	0.518099	Hoxa11_Hoxc12	ENSMUST00000044767.8|Neurod6|ENSMUSG00000037984.8|neurogenic differentiation 6
mm10_v2_chr10_-_19011948_19011973	0.507557	Hoxa11_Hoxc12	ENSMUST00000105527.1|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr9_+_3404058_3404098	0.50636	Hoxa11_Hoxc12	ENSMUST00000027027.5|Cwf19l2|ENSMUSG00000025898.5|CWF19-like 2, cell cycle control (S. pombe)
mm10_v2_chr18_-_46280820_46280850	0.495523	Hoxa11_Hoxc12	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr2_-_180824596_180824630	0.493856	Hoxa11_Hoxc12	ENSMUST00000148700.1|Gm14340|ENSMUSG00000074507.6|predicted gene 14340
mm10_v2_chr1_-_93101825_93101849	0.483603	Hoxa11_Hoxc12	ENSMUST00000112958.2|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr11_-_115627948_115628122	0.48154	Hoxa11_Hoxc12	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr8_-_69625503_69625559	0.478045	Hoxa11_Hoxc12	ENSMUST00000121886.1|Zfp868|ENSMUSG00000060427.9|zinc finger protein 868
mm10_v2_chr13_-_35027077_35027099	0.432669	Hoxa11_Hoxc12	ENSMUST00000170538.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000163280.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2
mm10_v2_chr4_+_130913264_130913358	0.432452	Hoxa11_Hoxc12	ENSMUST00000156225.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5 	ENSMUST00000156742.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5
mm10_v2_chr16_+_96235801_96235801	0.413847	Hoxa11_Hoxc12	ENSMUST00000113800.2|B3galt5|ENSMUSG00000074892.3|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm10_v2_chr11_+_62458414_62458469	0.4097	Hoxa11_Hoxc12	ENSMUST00000014389.5|Pigl|ENSMUSG00000014245.8|phosphatidylinositol glycan anchor biosynthesis, class L
mm10_v2_chr3_+_32436376_32436376	0.408624	Hoxa11_Hoxc12	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr7_+_100372224_100372383	0.380602	Hoxa11_Hoxc12	ENSMUST00000051777.8|C2cd3|ENSMUSG00000047248.13|C2 calcium-dependent domain containing 3 	ENSMUST00000098259.4|C2cd3|ENSMUSG00000047248.13|C2 calcium-dependent domain containing 3
mm10_v2_chr11_-_115628125_115628164	0.372088	Hoxa11_Hoxc12	ENSMUST00000155709.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000021089.4|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr3_+_79885930_79886002	0.37139	Hoxa11_Hoxc12	ENSMUST00000029567.8|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr5_-_116024475_116024508	0.351279	Hoxa11_Hoxc12	ENSMUST00000111999.1|Prkab1|ENSMUSG00000029513.8|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm10_v2_chr8_+_31150307_31150346	0.350505	Hoxa11_Hoxc12	ENSMUST00000098842.2|Tti2|ENSMUSG00000031577.9|TELO2 interacting protein 2
mm10_v2_chr6_+_40325471_40325501	0.349356	Hoxa11_Hoxc12	ENSMUST00000031977.8|Agk|ENSMUSG00000029916.8|acylglycerol kinase
mm10_v2_chr17_+_8283762_8283852	0.340842	Hoxa11_Hoxc12	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr11_-_115628260_115628298	0.339143	Hoxa11_Hoxc12	ENSMUST00000178003.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr4_+_130913120_130913137	0.325273	Hoxa11_Hoxc12	ENSMUST00000151698.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5
mm10_v2_chr15_-_77970750_77970824	0.320446	Hoxa11_Hoxc12	ENSMUST00000100484.4|Eif3d|ENSMUSG00000016554.8|eukaryotic translation initiation factor 3, subunit D
mm10_v2_chr13_+_65512678_65512678	0.312082	Hoxa11_Hoxc12	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr11_-_62789402_62789443	0.30933	Hoxa11_Hoxc12	ENSMUST00000108705.1|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr3_-_142881942_142882017	0.308049	Hoxa11_Hoxc12	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr12_-_20900867_20900867	0.299433	Hoxa11_Hoxc12	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
mm10_v2_chr13_+_58281183_58281196	0.285268	Hoxa11_Hoxc12	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr4_+_108328136_108328180	0.27689	Hoxa11_Hoxc12	ENSMUST00000131656.1|Selrc1|ENSMUSG00000048351.8|Sel1 repeat containing 1
mm10_v2_chr3_-_117360876_117360876	0.266161	Hoxa11_Hoxc12	ENSMUST00000061071.8|D3Bwg0562e|ENSMUSG00000044667.8|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm10_v2_chr7_-_46795881_46796085	0.249488	Hoxa11_Hoxc12	ENSMUST00000107653.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000107654.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000014562.7|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000152759.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr5_-_73256555_73256636	0.247493	Hoxa11_Hoxc12	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr2_-_120970706_120970761	0.231209	Hoxa11_Hoxc12	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr1_+_72307413_72307450	0.228723	Hoxa11_Hoxc12	ENSMUST00000027379.8|Xrcc5|ENSMUSG00000026187.8|X-ray repair complementing defective repair in Chinese hamster cells 5
mm10_v2_chr2_-_104712122_104712180	0.228052	Hoxa11_Hoxc12	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr5_+_3543812_3543853	0.226141	Hoxa11_Hoxc12	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr7_-_46795661_46795722	0.208004	Hoxa11_Hoxc12	ENSMUST00000123725.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr6_+_42286676_42286687	0.207585	Hoxa11_Hoxc12	ENSMUST00000031894.6|Clcn1|ENSMUSG00000029862.9|chloride channel 1
mm10_v2_chr14_-_104522615_104522707	0.205685	Hoxa11_Hoxc12	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr19_-_7483212_7483229	0.198002	Hoxa11_Hoxc12	ENSMUST00000088169.5|Rtn3|ENSMUSG00000024758.8|reticulon 3
mm10_v2_chr11_+_3963970_3963983	0.196689	Hoxa11_Hoxc12	ENSMUST00000020705.4|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish) 	ENSMUST00000109985.1|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm10_v2_chr10_-_120979327_120979373	0.193614	Hoxa11_Hoxc12	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr4_+_102741287_102741298	0.177739	Hoxa11_Hoxc12	ENSMUST00000097948.2|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1
mm10_v2_chr11_-_62789445_62789478	0.170117	Hoxa11_Hoxc12	ENSMUST00000054654.6|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr12_+_78226627_78226655	0.164176	Hoxa11_Hoxc12	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr16_-_45408955_45409053	0.163446	Hoxa11_Hoxc12	ENSMUST00000163230.1|Cd200|ENSMUSG00000022661.8|CD200 antigen
mm10_v2_chr5_-_116024452_116024468	0.158165	Hoxa11_Hoxc12	ENSMUST00000031486.7|Prkab1|ENSMUSG00000029513.8|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm10_v2_chr3_+_129532386_129532440	0.15166	Hoxa11_Hoxc12	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr11_-_72267141_72267222	0.150706	Hoxa11_Hoxc12	ENSMUST00000137701.1|Slc13a5|ENSMUSG00000020805.7|solute carrier family 13 (sodium-dependent citrate transporter), member 5
mm10_v2_chr13_-_98262946_98263020	0.150632	Hoxa11_Hoxc12	ENSMUST00000040972.2|Utp15|ENSMUSG00000041747.2|UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm10_v2_chr7_-_119895446_119895543	0.148251	Hoxa11_Hoxc12	ENSMUST00000098080.2|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr6_+_42286709_42286856	0.145296	Hoxa11_Hoxc12	ENSMUST00000163936.1|Clcn1|ENSMUSG00000029862.9|chloride channel 1
mm10_v2_chr13_+_98263242_98263302	0.129499	Hoxa11_Hoxc12	ENSMUST00000022164.8|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2 	ENSMUST00000150352.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr18_-_43393346_43393381	0.125625	Hoxa11_Hoxc12	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr17_-_21845759_21845759	0.120836	Hoxa11_Hoxc12	ENSMUST00000084141.4|Zfp820|ENSMUSG00000069743.4|zinc finger protein 820
mm10_v2_chr6_-_118455475_118455528	0.118753	Hoxa11_Hoxc12	ENSMUST00000161519.1|Zfp248|ENSMUSG00000030145.8|zinc finger protein 248 	ENSMUST00000069292.7|Zfp248|ENSMUSG00000030145.8|zinc finger protein 248
mm10_v2_chr9_-_106247730_106247874	0.117502	Hoxa11_Hoxc12	ENSMUST00000112524.2|Alas1|ENSMUSG00000032786.8|aminolevulinic acid synthase 1 	ENSMUST00000074082.6|Alas1|ENSMUSG00000032786.8|aminolevulinic acid synthase 1
mm10_v2_chr3_+_88621102_88621130	0.0965716	Hoxa11_Hoxc12	ENSMUST00000029694.7|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000176804.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr6_-_87809757_87809787	0.0919723	Hoxa11_Hoxc12	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr13_+_98263105_98263177	0.0871653	Hoxa11_Hoxc12	ENSMUST00000150916.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr12_+_59066908_59066931	0.0846526	Hoxa11_Hoxc12	ENSMUST00000021381.4|Pnn|ENSMUSG00000020994.4|pinin
mm10_v2_chr16_-_16600533_16600576	0.0798579	Hoxa11_Hoxc12	ENSMUST00000159542.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr5_-_143292356_143292356	0.0751473	Hoxa11_Hoxc12	ENSMUST00000180336.1|Zfp853|ENSMUSG00000093910.1|zinc finger protein 853
mm10_v2_chr9_-_75441652_75441652	0.074789	Hoxa11_Hoxc12	ENSMUST00000181896.1|A130057D12Rik|ENSMUSG00000097298.1|RIKEN cDNA A130057D12 gene
mm10_v2_chr8_+_124023394_124023394	0.0725913	Hoxa11_Hoxc12	ENSMUST00000034457.8|Urb2|ENSMUSG00000031976.8|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm10_v2_chr13_+_98263187_98263221	0.072526	Hoxa11_Hoxc12	ENSMUST00000091356.3|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2 	ENSMUST00000123924.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr1_+_182409162_182409184	0.0629889	Hoxa11_Hoxc12	ENSMUST00000117245.1|Trp53bp2|ENSMUSG00000026510.9|transformation related protein 53 binding protein 2
mm10_v2_chr9_-_55919605_55919605	0.0607476	Hoxa11_Hoxc12	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr19_+_5406815_5406880	0.043835	Hoxa11_Hoxc12	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr11_-_97699634_97699698	0.0386245	Hoxa11_Hoxc12	ENSMUST00000103148.1|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2 	ENSMUST00000169807.1|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chr8_+_40307458_40307458	0.0305958	Hoxa11_Hoxc12	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr7_+_43634718_43634741	0.0226758	Hoxa11_Hoxc12	ENSMUST00000032663.8|Ceacam18|ENSMUSG00000030472.8|carcinoembryonic antigen-related cell adhesion molecule 18
mm10_v2_chr17_-_24455265_24455345	0.0198495	Hoxa11_Hoxc12	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr17_-_46674255_46674274	0.0188022	Hoxa11_Hoxc12	ENSMUST00000024766.6|Rrp36|ENSMUSG00000023971.8|ribosomal RNA processing 36 homolog (S. cerevisiae)
mm10_v2_chr11_-_23895208_23895280	0.012071	Hoxa11_Hoxc12	ENSMUST00000102863.2|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma 	ENSMUST00000020513.3|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma
