mm10_v2_chr5_+_139543889_139543904	10.7036	Hoxa2	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr2_-_117342949_117343001	6.65931	Hoxa2	ENSMUST00000102534.4|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr2_-_117342831_117342896	6.34363	Hoxa2	ENSMUST00000178884.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr2_-_117342709_117342822	6.24633	Hoxa2	ENSMUST00000173541.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000172901.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000173252.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr12_+_109747903_109748051	6.15748	Hoxa2	ENSMUST00000183084.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene 	ENSMUST00000182300.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene
mm10_v2_chr14_-_34374617_34374789	5.5703	Hoxa2	ENSMUST00000023826.4|Sncg|ENSMUSG00000023064.4|synuclein, gamma
mm10_v2_chr10_-_26078987_26079052	4.41394	Hoxa2	ENSMUST00000066049.6|Tmem200a|ENSMUSG00000049420.8|transmembrane protein 200A
mm10_v2_chr3_+_55782500_55782521	4.05176	Hoxa2	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr8_-_4779513_4779591	3.97766	Hoxa2	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr7_+_45163915_45163926	3.463	Hoxa2	ENSMUST00000085374.5|Slc17a7|ENSMUSG00000070570.4|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm10_v2_chr5_+_24985840_24985862	3.30506	Hoxa2	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr9_-_73968901_73968999	3.00062	Hoxa2	ENSMUST00000184666.1|Unc13c|ENSMUSG00000062151.7|unc-13 homolog C (C. elegans)
mm10_v2_chr8_-_105471481_105471526	2.70249	Hoxa2	ENSMUST00000014990.6|Tppp3|ENSMUSG00000014846.6|tubulin polymerization-promoting protein family member 3
mm10_v2_chr9_-_106158109_106158138	2.49732	Hoxa2	ENSMUST00000159809.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000162562.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000036382.6|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000112543.2|Glyctk|ENSMUSG00000020258.9|glycerate kinase
mm10_v2_chr12_+_44328882_44328954	2.48156	Hoxa2	ENSMUST00000020939.8|Nrcam|ENSMUSG00000020598.9|neuron-glia-CAM-related cell adhesion molecule 	ENSMUST00000110748.2|Nrcam|ENSMUSG00000020598.9|neuron-glia-CAM-related cell adhesion molecule
mm10_v2_chr17_-_53539411_53539459	2.32028	Hoxa2	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr1_-_133907053_133907172	2.28753	Hoxa2	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr11_-_58801944_58801968	2.27126	Hoxa2	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr6_+_14901344_14901364	2.16148	Hoxa2	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr19_-_41743665_41743706	2.14322	Hoxa2	ENSMUST00000025993.3|Slit1|ENSMUSG00000025020.5|slit homolog 1 (Drosophila)
mm10_v2_chr6_+_83156401_83156451	2.11802	Hoxa2	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr4_-_141606011_141606058	2.05494	Hoxa2	ENSMUST00000123150.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000133874.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000136831.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000130181.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000105785.2|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr15_-_84447037_84447097	2.01949	Hoxa2	ENSMUST00000080751.2|1810041L15Rik|ENSMUSG00000062760.4|RIKEN cDNA 1810041L15 gene
mm10_v2_chr8_-_87959560_87959595	2.0138	Hoxa2	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr4_-_35157404_35157500	1.99916	Hoxa2	ENSMUST00000102975.3|Mob3b|ENSMUSG00000073910.4|MOB kinase activator 3B
mm10_v2_chr15_-_81729864_81729919	1.974	Hoxa2	ENSMUST00000171115.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000170134.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000052374.5|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1
mm10_v2_chr1_-_133906973_133907014	1.93	Hoxa2	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr5_-_30945393_30945480	1.87527	Hoxa2	ENSMUST00000031051.6|Cgref1|ENSMUSG00000029161.6|cell growth regulator with EF hand domain 1
mm10_v2_chr7_+_73391160_73391296	1.80117	Hoxa2	ENSMUST00000128471.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr2_-_69206133_69206144	1.79475	Hoxa2	ENSMUST00000112320.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr6_+_5390387_5390427	1.75803	Hoxa2	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr12_-_32061221_32061301	1.74499	Hoxa2	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr10_-_92162753_92162765	1.6724	Hoxa2	ENSMUST00000182197.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr3_+_124321031_124321113	1.67129	Hoxa2	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr4_+_15881255_15881272	1.64166	Hoxa2	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr8_+_83389846_83389872	1.62239	Hoxa2	ENSMUST00000002259.6|Clgn|ENSMUSG00000002190.7|calmegin
mm10_v2_chr9_+_51621425_51621425	1.61935	Hoxa2	ENSMUST00000089534.4|Gm7293|ENSMUSG00000078308.1|predicted gene 7293
mm10_v2_chr4_+_95557494_95557544	1.61518	Hoxa2	ENSMUST00000079223.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000177394.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr3_+_134828993_134829015	1.60736	Hoxa2	ENSMUST00000029822.4|Tacr3|ENSMUSG00000028172.4|tachykinin receptor 3
mm10_v2_chr11_-_106998483_106998491	1.58587	Hoxa2	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr15_+_59648350_59648369	1.57424	Hoxa2	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr3_-_116253467_116253484	1.57006	Hoxa2	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr4_+_116596672_116596730	1.56956	Hoxa2	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr2_+_174285352_174285364	1.5198	Hoxa2	ENSMUST00000130761.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr5_+_115908644_115908734	1.48488	Hoxa2	ENSMUST00000141101.1|Cit|ENSMUSG00000029516.13|citron
mm10_v2_chr2_-_69206146_69206194	1.48419	Hoxa2	ENSMUST00000127243.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000149643.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000167875.2|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000005365.8|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr8_-_110902442_110902467	1.47135	Hoxa2	ENSMUST00000041382.6|Fuk|ENSMUSG00000033703.8|fucokinase
mm10_v2_chr17_+_34135182_34135182	1.41462	Hoxa2	ENSMUST00000042121.9|H2-DMa|ENSMUSG00000037649.9|histocompatibility 2, class II, locus DMa
mm10_v2_chr5_-_24527276_24527276	1.40071	Hoxa2	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chrX_+_96455359_96455411	1.39763	Hoxa2	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr14_+_58070547_58070547	1.39502	Hoxa2	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr7_+_100537192_100537232	1.37217	Hoxa2	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr12_-_15816762_15816881	1.34594	Hoxa2	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chrX_-_103483205_103483225	1.32255	Hoxa2	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr1_-_9700209_9700329	1.30134	Hoxa2	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr3_-_107931817_107931885	1.29247	Hoxa2	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr9_-_21760275_21760294	1.28765	Hoxa2	ENSMUST00000098942.4|Spc24|ENSMUSG00000074476.5|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr9_-_70141484_70141578	1.2627	Hoxa2	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr19_+_24875679_24875689	1.25195	Hoxa2	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr19_+_23723279_23723279	1.24298	Hoxa2	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr19_-_10203880_10204169	1.23029	Hoxa2	ENSMUST00000142241.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000116542.2|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000025651.5|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000156291.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1
mm10_v2_chr6_+_142413441_142413441	1.22782	Hoxa2	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr9_+_122951051_122951106	1.20746	Hoxa2	ENSMUST00000040717.5|Kif15|ENSMUSG00000036768.5|kinesin family member 15
mm10_v2_chr11_-_78984831_78984924	1.19575	Hoxa2	ENSMUST00000073001.4|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9 	ENSMUST00000108269.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr10_-_109009055_109009111	1.19482	Hoxa2	ENSMUST00000156979.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr5_+_30281377_30281447	1.18191	Hoxa2	ENSMUST00000101448.3|Drc1|ENSMUSG00000073102.3|dynein regulatory complex subunit 1
mm10_v2_chr3_-_88461182_88461226	1.16597	Hoxa2	ENSMUST00000166237.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr2_+_103957976_103958021	1.14417	Hoxa2	ENSMUST00000156813.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2 	ENSMUST00000170926.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2
mm10_v2_chr11_-_68927049_68927101	1.13251	Hoxa2	ENSMUST00000038932.7|Odf4|ENSMUSG00000032921.7|outer dense fiber of sperm tails 4
mm10_v2_chr7_+_81858993_81859010	1.10591	Hoxa2	ENSMUST00000041890.1|Tm6sf1|ENSMUSG00000038623.3|transmembrane 6 superfamily member 1
mm10_v2_chr9_+_104569671_104569683	1.06931	Hoxa2	ENSMUST00000057742.8|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr4_-_141606096_141606112	1.05902	Hoxa2	ENSMUST00000153189.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr17_-_71310952_71310969	1.04895	Hoxa2	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr1_-_83408190_83408222	1.0171	Hoxa2	ENSMUST00000160953.1|Sphkap|ENSMUSG00000026163.11|SPHK1 interactor, AKAP domain containing
mm10_v2_chr3_+_103739366_103739366	1.01296	Hoxa2	ENSMUST00000106852.1|Gm10964|ENSMUSG00000078620.1|predicted gene 10964
mm10_v2_chr10_-_63421739_63421739	1.01171	Hoxa2	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chrX_+_8892376_8892423	1.00597	Hoxa2	ENSMUST00000064196.3|B630019K06Rik|ENSMUSG00000052364.3|RIKEN cDNA B630019K06 gene
mm10_v2_chr1_-_175688353_175688353	0.979905	Hoxa2	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr14_-_7483762_7483762	0.974094	Hoxa2	ENSMUST00000164366.1|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr5_+_92683625_92683648	0.971976	Hoxa2	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr8_+_83389878_83389889	0.968036	Hoxa2	ENSMUST00000109831.2|Clgn|ENSMUSG00000002190.7|calmegin
mm10_v2_chr9_-_71485893_71485975	0.957092	Hoxa2	ENSMUST00000034720.5|Polr2m|ENSMUSG00000032199.6|polymerase (RNA) II (DNA directed) polypeptide M
mm10_v2_chr11_-_100356116_100356128	0.954109	Hoxa2	ENSMUST00000138603.2|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr2_+_181763315_181763335	0.947702	Hoxa2	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr1_-_170215380_170215420	0.938455	Hoxa2	ENSMUST00000027979.7|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1 	ENSMUST00000123399.1|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1
mm10_v2_chr14_+_53665912_53665946	0.937274	Hoxa2	ENSMUST00000181768.1|Trav3-3|ENSMUSG00000094828.4|T cell receptor alpha variable 3-3
mm10_v2_chr11_-_78984946_78984957	0.927578	Hoxa2	ENSMUST00000108268.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr9_-_14782964_14782964	0.914342	Hoxa2	ENSMUST00000034406.3|Ankrd49|ENSMUSG00000031931.3|ankyrin repeat domain 49
mm10_v2_chr4_-_83285141_83285169	0.913079	Hoxa2	ENSMUST00000150522.1|Ttc39b|ENSMUSG00000038172.8|tetratricopeptide repeat domain 39B
mm10_v2_chr9_+_104569754_104569793	0.907217	Hoxa2	ENSMUST00000077190.6|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr4_-_43653542_43653557	0.90591	Hoxa2	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chrX_+_37126777_37126795	0.904568	Hoxa2	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr10_-_96409038_96409038	0.902017	Hoxa2	ENSMUST00000179683.1|Gm20091|ENSMUSG00000094249.1|predicted gene, 20091
mm10_v2_chr5_-_130024280_130024381	0.900061	Hoxa2	ENSMUST00000161640.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161884.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161094.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase
mm10_v2_chr7_+_142460834_142460886	0.890989	Hoxa2	ENSMUST00000018963.4|Lsp1|ENSMUSG00000018819.4|lymphocyte specific 1 	ENSMUST00000105967.1|Lsp1|ENSMUSG00000018819.4|lymphocyte specific 1
mm10_v2_chr11_-_40755201_40755311	0.885205	Hoxa2	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chrX_+_73214333_73214432	0.866869	Hoxa2	ENSMUST00000156188.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069077.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069103.4|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000114506.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000081827.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B
mm10_v2_chr13_+_23575753_23575773	0.863189	Hoxa2	ENSMUST00000105105.1|Hist1h3d|ENSMUSG00000062808.4|histone cluster 1, H3d
mm10_v2_chr3_-_37125943_37125969	0.859274	Hoxa2	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr15_-_20666750_20666780	0.856662	Hoxa2	ENSMUST00000052910.4|Acot10|ENSMUSG00000047565.4|acyl-CoA thioesterase 10
mm10_v2_chr3_-_92429403_92429426	0.854191	Hoxa2	ENSMUST00000047300.7|Gm9774|ENSMUSG00000042165.7|predicted pseudogene 9774
mm10_v2_chr11_+_108682602_108682639	0.850661	Hoxa2	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr3_+_85915722_85915722	0.821649	Hoxa2	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr11_-_100356078_100356096	0.818164	Hoxa2	ENSMUST00000103124.4|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr4_+_46450892_46450903	0.804092	Hoxa2	ENSMUST00000102926.4|Anp32b|ENSMUSG00000028333.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm10_v2_chr3_-_107943362_107943379	0.800302	Hoxa2	ENSMUST00000106683.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chrX_-_104671048_104671071	0.798436	Hoxa2	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr8_+_123411424_123411562	0.785537	Hoxa2	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr9_+_121710389_121710422	0.770306	Hoxa2	ENSMUST00000035113.9|Deb1|ENSMUSG00000032526.10|differentially expressed in B16F10 1
mm10_v2_chrM_+_7759_7927	0.763388	Hoxa2	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr12_+_87443896_87443946	0.759791	Hoxa2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chrX_-_102157065_102157096	0.755713	Hoxa2	ENSMUST00000056904.2|Ercc6l|ENSMUSG00000051220.2|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm10_v2_chr17_+_80290206_80290279	0.754259	Hoxa2	ENSMUST00000061703.9|Morn2|ENSMUSG00000045257.9|MORN repeat containing 2
mm10_v2_chr12_-_87233556_87233556	0.753216	Hoxa2	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr4_+_145510759_145510791	0.746693	Hoxa2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr14_+_65806066_65806232	0.742762	Hoxa2	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr4_+_105790534_105790534	0.735039	Hoxa2	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr5_+_115235836_115235836	0.716834	Hoxa2	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr4_-_43653560_43653594	0.706707	Hoxa2	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr3_-_58525867_58525873	0.706036	Hoxa2	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr5_+_106609098_106609098	0.703998	Hoxa2	ENSMUST00000167618.1|Gm17304|ENSMUSG00000091096.1|predicted gene, 17304
mm10_v2_chrX_+_12587791_12587846	0.699044	Hoxa2	ENSMUST00000033313.2|Atp6ap2|ENSMUSG00000031007.2|ATPase, H+ transporting, lysosomal accessory protein 2
mm10_v2_chr19_+_32389202_32389257	0.692243	Hoxa2	ENSMUST00000181612.1|2700046G09Rik|ENSMUSG00000097787.1|RIKEN cDNA 2700046G09 gene
mm10_v2_chr4_-_94603239_94603253	0.691864	Hoxa2	ENSMUST00000107107.2|Plaa|ENSMUSG00000028577.7|phospholipase A2, activating protein
mm10_v2_chr13_+_117220584_117220637	0.691024	Hoxa2	ENSMUST00000022242.7|Emb|ENSMUSG00000021728.7|embigin
mm10_v2_chr2_+_174285256_174285284	0.687282	Hoxa2	ENSMUST00000130940.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr5_+_138363719_138363719	0.681753	Hoxa2	ENSMUST00000100526.2|Gm10874|ENSMUSG00000075591.2|predicted gene 10874
mm10_v2_chr14_-_59365410_59365461	0.679955	Hoxa2	ENSMUST00000161031.1|Phf11d|ENSMUSG00000068245.8|PHD finger protein 11D 	ENSMUST00000160425.1|Phf11d|ENSMUSG00000068245.8|PHD finger protein 11D
mm10_v2_chrX_+_73192222_73192222	0.679331	Hoxa2	ENSMUST00000101486.4|Xlr3b|ENSMUSG00000073125.4|X-linked lymphocyte-regulated 3B
mm10_v2_chr7_+_27473761_27473773	0.675023	Hoxa2	ENSMUST00000068641.6|Sertad3|ENSMUSG00000055200.6|SERTA domain containing 3
mm10_v2_chr17_-_32166879_32166898	0.672438	Hoxa2	ENSMUST00000087723.3|Notch3|ENSMUSG00000038146.7|notch 3
mm10_v2_chr13_-_54565368_54565435	0.665792	Hoxa2	ENSMUST00000026989.8|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chr12_-_16800886_16800931	0.664422	Hoxa2	ENSMUST00000161998.1|Greb1|ENSMUSG00000036523.10|gene regulated by estrogen in breast cancer protein
mm10_v2_chr6_+_11925869_11925941	0.663293	Hoxa2	ENSMUST00000115510.1|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000115511.2|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000090632.4|Phf14|ENSMUSG00000029629.10|PHD finger protein 14
mm10_v2_chr3_-_107943705_107943749	0.659108	Hoxa2	ENSMUST00000106680.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106684.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106685.2|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr7_-_27985796_27985796	0.650262	Hoxa2	ENSMUST00000099111.3|Zfp850|ENSMUSG00000074608.3|zinc finger protein 850
mm10_v2_chr3_+_32708546_32708738	0.645221	Hoxa2	ENSMUST00000029214.7|Actl6a|ENSMUSG00000027671.8|actin-like 6A
mm10_v2_chr6_+_14901440_14901497	0.643288	Hoxa2	ENSMUST00000128567.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr16_-_23890805_23890861	0.640566	Hoxa2	ENSMUST00000004480.3|Sst|ENSMUSG00000004366.3|somatostatin
mm10_v2_chrX_-_17571563_17571641	0.640319	Hoxa2	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr3_+_76075583_76075583	0.640195	Hoxa2	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr16_+_38346986_38347050	0.640096	Hoxa2	ENSMUST00000050273.8|Cox17|ENSMUSG00000046516.10|cytochrome c oxidase assembly protein 17 	ENSMUST00000120495.1|Cox17|ENSMUSG00000046516.10|cytochrome c oxidase assembly protein 17 	ENSMUST00000119704.1|Gm21987|ENSMUSG00000095464.1|predicted gene 21987
mm10_v2_chr7_+_100495987_100496079	0.633104	Hoxa2	ENSMUST00000133044.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr2_-_149798701_149798743	0.631895	Hoxa2	ENSMUST00000148202.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133 	ENSMUST00000139471.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133
mm10_v2_chr10_-_95673451_95673451	0.629326	Hoxa2	ENSMUST00000099328.1|Anapc15-ps|ENSMUSG00000074780.1|anaphase prompoting complex C subunit 15, pseudogene
mm10_v2_chr5_-_114858682_114858682	0.625695	Hoxa2	ENSMUST00000066959.4|Gm9936|ENSMUSG00000054123.4|predicted gene 9936
mm10_v2_chr15_-_78773452_78773486	0.613864	Hoxa2	ENSMUST00000018313.5|Mfng|ENSMUSG00000018169.6|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr4_+_134510999_134511076	0.613519	Hoxa2	ENSMUST00000105866.2|Aunip|ENSMUSG00000078521.2|aurora kinase A and ninein interacting protein
mm10_v2_chr3_+_96181151_96181167	0.607119	Hoxa2	ENSMUST00000035371.8|Sv2a|ENSMUSG00000038486.8|synaptic vesicle glycoprotein 2 a
mm10_v2_chr3_+_89183131_89183207	0.604474	Hoxa2	ENSMUST00000140473.1|Fam189b|ENSMUSG00000032657.9|family with sequence similarity 189, member B 	ENSMUST00000041913.6|Fam189b|ENSMUSG00000032657.9|family with sequence similarity 189, member B
mm10_v2_chr10_+_4266323_4266341	0.603897	Hoxa2	ENSMUST00000045730.5|Akap12|ENSMUSG00000038587.8|A kinase (PRKA) anchor protein (gravin) 12
mm10_v2_chrX_-_135210672_135210700	0.601345	Hoxa2	ENSMUST00000033783.1|Tceal6|ENSMUSG00000031409.1|transcription elongation factor A (SII)-like 6
mm10_v2_chr15_+_52712434_52712477	0.600498	Hoxa2	ENSMUST00000037115.7|Med30|ENSMUSG00000038622.7|mediator complex subunit 30
mm10_v2_chr9_+_80066939_80066983	0.596583	Hoxa2	ENSMUST00000164859.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr10_-_128804353_128804374	0.595827	Hoxa2	ENSMUST00000051011.7|Tmem198b|ENSMUSG00000047090.7|transmembrane protein 198b
mm10_v2_chr4_-_92191749_92191749	0.594181	Hoxa2	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr17_+_66123520_66123582	0.594049	Hoxa2	ENSMUST00000163605.2|Ddx11|ENSMUSG00000035842.9|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
mm10_v2_chr6_+_108828633_108828721	0.587428	Hoxa2	ENSMUST00000089162.3|Edem1|ENSMUSG00000030104.7|ER degradation enhancer, mannosidase alpha-like 1
mm10_v2_chr7_-_28050028_28050101	0.580433	Hoxa2	ENSMUST00000032824.9|Psmc4|ENSMUSG00000030603.9|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm10_v2_chr9_+_75441518_75441575	0.570525	Hoxa2	ENSMUST00000048937.4|Leo1|ENSMUSG00000042487.5|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr2_-_73625731_73625744	0.569974	Hoxa2	ENSMUST00000070579.6|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr13_+_18948344_18948417	0.567495	Hoxa2	ENSMUST00000003345.7|Amph|ENSMUSG00000021314.7|amphiphysin
mm10_v2_chr16_+_44347121_44347121	0.560133	Hoxa2	ENSMUST00000050897.6|Spice1|ENSMUSG00000043065.6|spindle and centriole associated protein 1
mm10_v2_chr19_-_31765027_31765079	0.557244	Hoxa2	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr2_-_126709567_126709567	0.555639	Hoxa2	ENSMUST00000099423.2|Gm10774|ENSMUSG00000074846.2|predicted pseudogene 10774
mm10_v2_chr3_-_157925056_157925077	0.550406	Hoxa2	ENSMUST00000118539.1|Cth|ENSMUSG00000028179.11|cystathionase (cystathionine gamma-lyase)
mm10_v2_chr2_-_121271403_121271410	0.547214	Hoxa2	ENSMUST00000110648.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr15_-_102350692_102350771	0.538645	Hoxa2	ENSMUST00000041208.7|Aaas|ENSMUSG00000036678.7|achalasia, adrenocortical insufficiency, alacrimia
mm10_v2_chr2_-_121271341_121271397	0.537816	Hoxa2	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr11_+_6560183_6560240	0.53616	Hoxa2	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr13_+_4233730_4233758	0.529116	Hoxa2	ENSMUST00000081326.6|Akr1c19|ENSMUSG00000071551.6|aldo-keto reductase family 1, member C19
mm10_v2_chr4_+_123183456_123183601	0.526237	Hoxa2	ENSMUST00000126995.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chr9_-_64737684_64737763	0.516013	Hoxa2	ENSMUST00000171100.1|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family 	ENSMUST00000167569.1|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family 	ENSMUST00000004892.6|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family 	ENSMUST00000172298.1|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family
mm10_v2_chr9_-_31131817_31131853	0.515373	Hoxa2	ENSMUST00000034478.2|St14|ENSMUSG00000031995.2|suppression of tumorigenicity 14 (colon carcinoma)
mm10_v2_chr1_+_187215501_187215547	0.505097	Hoxa2	ENSMUST00000097443.3|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000065573.7|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000110943.2|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000044812.5|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr2_-_25224653_25224702	0.504745	Hoxa2	ENSMUST00000043584.4|Tubb4b|ENSMUSG00000036752.4|tubulin, beta 4B class IVB
mm10_v2_chr17_+_78491549_78491565	0.499199	Hoxa2	ENSMUST00000079363.4|Gm10093|ENSMUSG00000061062.4|predicted pseudogene 10093
mm10_v2_chr5_-_98566762_98566762	0.496542	Hoxa2	ENSMUST00000086912.4|1700010H22Rik|ENSMUSG00000067101.4|RIKEN cDNA 1700010H22 gene
mm10_v2_chrX_-_73265390_73265390	0.492971	Hoxa2	ENSMUST00000080839.1|Xlr3c|ENSMUSG00000058147.1|X-linked lymphocyte-regulated 3C
mm10_v2_chr12_-_59061425_59061477	0.487754	Hoxa2	ENSMUST00000021380.8|Trappc6b|ENSMUSG00000020993.8|trafficking protein particle complex 6B
mm10_v2_chr7_-_116084635_116084635	0.485294	Hoxa2	ENSMUST00000111755.3|Gm4353|ENSMUSG00000091900.2|predicted gene 4353
mm10_v2_chr4_+_123183722_123183738	0.485094	Hoxa2	ENSMUST00000152194.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chr8_-_46211284_46211284	0.483743	Hoxa2	ENSMUST00000034049.4|Slc25a4|ENSMUSG00000031633.4|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm10_v2_chr11_-_103938211_103938217	0.480186	Hoxa2	ENSMUST00000133774.2|Nsf|ENSMUSG00000034187.12|N-ethylmaleimide sensitive fusion protein 	ENSMUST00000149642.1|Nsf|ENSMUSG00000034187.12|N-ethylmaleimide sensitive fusion protein
mm10_v2_chr1_-_38898084_38898177	0.478553	Hoxa2	ENSMUST00000027249.6|Chst10|ENSMUSG00000026080.8|carbohydrate sulfotransferase 10
mm10_v2_chr1_+_153899937_153899953	0.477121	Hoxa2	ENSMUST00000086199.5|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr3_+_122044428_122044469	0.477069	Hoxa2	ENSMUST00000013995.8|Abca4|ENSMUSG00000028125.8|ATP-binding cassette, sub-family A (ABC1), member 4
mm10_v2_chr15_-_79505241_79505241	0.476539	Hoxa2	ENSMUST00000057801.6|Kcnj4|ENSMUSG00000044216.6|potassium inwardly-rectifying channel, subfamily J, member 4
mm10_v2_chr17_-_25880236_25880305	0.471757	Hoxa2	ENSMUST00000176696.1|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1 	ENSMUST00000095487.5|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1
mm10_v2_chr2_-_60963192_60963251	0.470583	Hoxa2	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr13_-_54565299_54565362	0.465633	Hoxa2	ENSMUST00000153065.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000126295.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000143144.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000132136.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chrX_-_17572241_17572325	0.463985	Hoxa2	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr17_+_46496753_46496809	0.46333	Hoxa2	ENSMUST00000046497.6|Dnph1|ENSMUSG00000040658.6|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
mm10_v2_chr18_+_56572822_56572822	0.454856	Hoxa2	ENSMUST00000008445.5|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr17_+_64600702_64600739	0.454512	Hoxa2	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr7_-_128596278_128596278	0.449036	Hoxa2	ENSMUST00000179317.1|Gm7258|ENSMUSG00000096557.1|predicted gene 7258
mm10_v2_chr7_-_47133395_47133437	0.447613	Hoxa2	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr3_-_65392579_65392623	0.444383	Hoxa2	ENSMUST00000029414.5|Ssr3|ENSMUSG00000027828.6|signal sequence receptor, gamma
mm10_v2_chr2_+_55411790_55411819	0.439022	Hoxa2	ENSMUST00000155997.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033 	ENSMUST00000128307.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033
mm10_v2_chr7_+_143823135_143823167	0.437618	Hoxa2	ENSMUST00000128454.1|Dhcr7|ENSMUSG00000058454.8|7-dehydrocholesterol reductase 	ENSMUST00000073878.5|Dhcr7|ENSMUSG00000058454.8|7-dehydrocholesterol reductase
mm10_v2_chr18_-_20682963_20683006	0.436339	Hoxa2	ENSMUST00000165229.2|Gm10269|ENSMUSG00000091449.2|predicted gene 10269
mm10_v2_chr17_-_15041457_15041559	0.435738	Hoxa2	ENSMUST00000097400.4|Gm3448|ENSMUSG00000079710.3|predicted gene 3448 	ENSMUST00000097398.4|Tcte3|ENSMUSG00000079707.3|t-complex-associated testis expressed 3 	ENSMUST00000040746.6|Tcte3|ENSMUSG00000079707.3|t-complex-associated testis expressed 3
mm10_v2_chr9_+_58129476_58129501	0.432054	Hoxa2	ENSMUST00000133287.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr11_-_98625661_98625661	0.432031	Hoxa2	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr9_+_75037809_75037820	0.426976	Hoxa2	ENSMUST00000167885.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr6_-_113501818_113501949	0.425356	Hoxa2	ENSMUST00000101059.1|Prrt3|ENSMUSG00000045009.7|proline-rich transmembrane protein 3
mm10_v2_chr2_-_174346712_174346712	0.425191	Hoxa2	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chr11_-_5898771_5898788	0.42183	Hoxa2	ENSMUST00000102921.3|Myl7|ENSMUSG00000020469.8|myosin, light polypeptide 7, regulatory
mm10_v2_chr5_-_100373484_100373527	0.421266	Hoxa2	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr14_+_61599493_61599548	0.419689	Hoxa2	ENSMUST00000039562.6|Trim13|ENSMUSG00000035235.6|tripartite motif-containing 13
mm10_v2_chr10_+_4611971_4612021	0.417844	Hoxa2	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr16_+_35983307_35983395	0.415158	Hoxa2	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr4_-_110290884_110290913	0.414595	Hoxa2	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr11_+_21239279_21239302	0.407725	Hoxa2	ENSMUST00000006221.7|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast) 	ENSMUST00000109578.1|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast)
mm10_v2_chr2_-_73453918_73453979	0.401953	Hoxa2	ENSMUST00000102679.1|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr11_+_72607221_72607307	0.401779	Hoxa2	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr7_-_133122615_133122762	0.400363	Hoxa2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr8_-_8639363_8639363	0.396272	Hoxa2	ENSMUST00000152698.1|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr2_+_153741274_153741294	0.394406	Hoxa2	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr10_+_57486354_57486414	0.393052	Hoxa2	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr10_+_102158858_102158889	0.392537	Hoxa2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr4_+_57845240_57845265	0.390642	Hoxa2	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr1_+_86587100_86587156	0.388113	Hoxa2	ENSMUST00000027446.4|Cops7b|ENSMUSG00000026240.6|COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana)
mm10_v2_chr2_-_121271315_121271322	0.387912	Hoxa2	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr13_-_63398167_63398261	0.386685	Hoxa2	ENSMUST00000160735.1|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C
mm10_v2_chr4_+_6191093_6191122	0.38638	Hoxa2	ENSMUST00000029907.5|Ubxn2b|ENSMUSG00000028243.5|UBX domain protein 2B
mm10_v2_chr9_-_22117123_22117174	0.386361	Hoxa2	ENSMUST00000013966.6|Elof1|ENSMUSG00000013822.6|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm10_v2_chr6_-_24527546_24527585	0.382272	Hoxa2	ENSMUST00000118558.1|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr15_-_81045467_81045546	0.378184	Hoxa2	ENSMUST00000135047.1|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr14_+_3846245_3846245	0.37747	Hoxa2	ENSMUST00000180934.1|Gm3033|ENSMUSG00000093887.2|predicted gene 3033
mm10_v2_chr17_+_30485511_30485511	0.377372	Hoxa2	ENSMUST00000064223.1|Gm9874|ENSMUSG00000052388.1|predicted gene 9874
mm10_v2_chr17_-_6317474_6317517	0.374473	Hoxa2	ENSMUST00000169415.1|Dynlt1a|ENSMUSG00000092074.1|dynein light chain Tctex-type 1A
mm10_v2_chr17_-_6655939_6655939	0.371465	Hoxa2	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr9_+_58134535_58134810	0.369839	Hoxa2	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr13_-_107414742_107414767	0.369248	Hoxa2	ENSMUST00000061241.6|Apoo-ps|ENSMUSG00000049233.6|apolipoprotein O, pseudogene
mm10_v2_chr9_+_75037744_75037755	0.365209	Hoxa2	ENSMUST00000168301.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr5_+_145140362_145140415	0.364595	Hoxa2	ENSMUST00000162594.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000162308.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000159018.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000160075.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast)
mm10_v2_chr14_+_11227511_11227552	0.363715	Hoxa2	ENSMUST00000080237.3|Rpl21-ps4|ENSMUSG00000072714.1|ribosomal protein L21, pseudogene 4
mm10_v2_chr15_-_55548164_55548164	0.363292	Hoxa2	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr14_-_7450917_7450917	0.362026	Hoxa2	ENSMUST00000169555.1|Gm3755|ENSMUSG00000091227.1|predicted gene 3755
mm10_v2_chr19_-_30549516_30549665	0.361434	Hoxa2	ENSMUST00000025803.8|Dkk1|ENSMUSG00000024868.8|dickkopf homolog 1 (Xenopus laevis)
mm10_v2_chr11_+_87760533_87760587	0.360664	Hoxa2	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr2_+_156475844_156475883	0.360503	Hoxa2	ENSMUST00000103135.1|Epb4.1l1|ENSMUSG00000027624.11|erythrocyte protein band 4.1-like 1
mm10_v2_chr18_-_10610124_10610144	0.358659	Hoxa2	ENSMUST00000097670.3|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr4_-_109202217_109202272	0.356953	Hoxa2	ENSMUST00000160774.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000030288.7|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000162787.2|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr11_-_120991039_120991092	0.355472	Hoxa2	ENSMUST00000070575.7|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr2_+_121358591_121358713	0.352804	Hoxa2	ENSMUST00000000317.6|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000129130.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous
mm10_v2_chr1_-_10038106_10038169	0.351862	Hoxa2	ENSMUST00000027050.3|Cops5|ENSMUSG00000025917.3|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm10_v2_chr2_-_101883010_101883023	0.348779	Hoxa2	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr18_+_76930017_76930101	0.34388	Hoxa2	ENSMUST00000026487.4|Ier3ip1|ENSMUSG00000090000.1|immediate early response 3 interacting protein 1
mm10_v2_chr7_+_144838590_144838614	0.343283	Hoxa2	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr6_-_86684510_86684529	0.339354	Hoxa2	ENSMUST00000001186.4|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5) 	ENSMUST00000113683.1|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5)
mm10_v2_chr5_+_76140700_76140730	0.337411	Hoxa2	ENSMUST00000152642.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3 	ENSMUST00000127278.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3
mm10_v2_chr18_-_20746402_20746422	0.336804	Hoxa2	ENSMUST00000070080.5|B4galt6|ENSMUSG00000056124.5|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6
mm10_v2_chr15_-_35938186_35938246	0.335951	Hoxa2	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr9_-_67043869_67043945	0.327058	Hoxa2	ENSMUST00000113696.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr12_+_87026564_87026616	0.327026	Hoxa2	ENSMUST00000110187.1|Tmem63c|ENSMUSG00000034145.8|transmembrane protein 63c 	ENSMUST00000156162.1|Tmem63c|ENSMUSG00000034145.8|transmembrane protein 63c
mm10_v2_chr15_-_89149557_89149650	0.326454	Hoxa2	ENSMUST00000088823.3|Mapk11|ENSMUSG00000053137.6|mitogen-activated protein kinase 11
mm10_v2_chr6_+_86628174_86628208	0.325833	Hoxa2	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr14_-_54409469_54409477	0.324911	Hoxa2	ENSMUST00000000984.4|Slc7a7|ENSMUSG00000000958.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm10_v2_chr13_-_23934156_23934225	0.323265	Hoxa2	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr9_+_75037614_75037701	0.320365	Hoxa2	ENSMUST00000168166.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000169492.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000170308.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr7_-_24587612_24587665	0.319523	Hoxa2	ENSMUST00000094705.2|Zfp575|ENSMUSG00000066721.3|zinc finger protein 575
mm10_v2_chr2_+_31572701_31572725	0.318206	Hoxa2	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr9_-_62510498_62510605	0.318041	Hoxa2	ENSMUST00000164246.2|Coro2b|ENSMUSG00000041729.9|coronin, actin binding protein, 2B
mm10_v2_chr1_+_134560157_134560180	0.31458	Hoxa2	ENSMUST00000047714.7|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr8_-_54529951_54530007	0.31151	Hoxa2	ENSMUST00000067476.8|Spcs3|ENSMUSG00000054408.9|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm10_v2_chr15_+_79030874_79030933	0.308033	Hoxa2	ENSMUST00000171999.1|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) 	ENSMUST00000006544.7|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm10_v2_chr2_-_152831665_152831735	0.306406	Hoxa2	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr2_+_156475803_156475837	0.30262	Hoxa2	ENSMUST00000029155.8|Epb4.1l1|ENSMUSG00000027624.11|erythrocyte protein band 4.1-like 1
mm10_v2_chr10_+_14523062_14523065	0.300658	Hoxa2	ENSMUST00000096020.5|Gm10335|ENSMUSG00000071532.5|predicted gene 10335
mm10_v2_chr8_+_95825353_95825354	0.294576	Hoxa2	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr14_-_13961202_13961278	0.291538	Hoxa2	ENSMUST00000065865.8|Thoc7|ENSMUSG00000053453.8|THO complex 7 homolog (Drosophila)
mm10_v2_chr19_+_4711153_4711258	0.284739	Hoxa2	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr14_+_3224440_3224440	0.278616	Hoxa2	ENSMUST00000112797.4|D830030K20Rik|ENSMUSG00000096039.1|RIKEN cDNA D830030K20 gene
mm10_v2_chr3_+_32529452_32529527	0.276287	Hoxa2	ENSMUST00000091257.4|Mfn1|ENSMUSG00000027668.7|mitofusin 1
mm10_v2_chr9_+_99243421_99243474	0.272797	Hoxa2	ENSMUST00000093795.3|Cep70|ENSMUSG00000056267.8|centrosomal protein 70
mm10_v2_chr5_+_10236829_10236829	0.272674	Hoxa2	ENSMUST00000101606.3|Gm10482|ENSMUSG00000073226.3|predicted gene 10482
mm10_v2_chr1_+_85100164_85100164	0.27221	Hoxa2	ENSMUST00000097669.1|Gm10553|ENSMUSG00000073631.1|predicted gene 10553
mm10_v2_chr3_-_119783262_119783388	0.265624	Hoxa2	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr10_-_81349085_81349240	0.264282	Hoxa2	ENSMUST00000141171.1|Hmg20b|ENSMUSG00000020232.11|high mobility group 20B
mm10_v2_chr18_-_6136057_6136098	0.259527	Hoxa2	ENSMUST00000182559.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr5_+_37735519_37735545	0.258117	Hoxa2	ENSMUST00000073554.3|Cytl1|ENSMUSG00000062329.3|cytokine-like 1
mm10_v2_chr6_-_112696604_112696686	0.256666	Hoxa2	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr5_+_122354369_122354455	0.255676	Hoxa2	ENSMUST00000155671.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000118830.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000117868.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000118765.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000145821.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe)
mm10_v2_chr9_+_3335470_3335501	0.254279	Hoxa2	ENSMUST00000053407.5|Alkbh8|ENSMUSG00000025899.7|alkB, alkylation repair homolog 8 (E. coli)
mm10_v2_chr7_-_79935258_79935371	0.251097	Hoxa2	ENSMUST00000048731.5|2610034B18Rik|ENSMUSG00000039043.5|RIKEN cDNA 2610034B18 gene
mm10_v2_chr5_-_122354161_122354237	0.248531	Hoxa2	ENSMUST00000117263.1|Rad9b|ENSMUSG00000038569.7|RAD9 homolog B 	ENSMUST00000049009.6|Rad9b|ENSMUSG00000038569.7|RAD9 homolog B
mm10_v2_chr9_+_75037838_75037917	0.248514	Hoxa2	ENSMUST00000169188.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr9_+_75037712_75037737	0.244115	Hoxa2	ENSMUST00000007800.7|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr3_-_89245005_89245031	0.239805	Hoxa2	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr4_-_108118528_108118553	0.237096	Hoxa2	ENSMUST00000030340.8|Scp2|ENSMUSG00000028603.9|sterol carrier protein 2, liver
mm10_v2_chr15_-_83510861_83510906	0.236671	Hoxa2	ENSMUST00000109479.1|Ttll1|ENSMUSG00000022442.9|tubulin tyrosine ligase-like 1 	ENSMUST00000109480.1|Ttll1|ENSMUSG00000022442.9|tubulin tyrosine ligase-like 1 	ENSMUST00000016897.4|Ttll1|ENSMUSG00000022442.9|tubulin tyrosine ligase-like 1
mm10_v2_chr8_-_8690493_8690538	0.235888	Hoxa2	ENSMUST00000048545.8|Arglu1|ENSMUSG00000040459.10|arginine and glutamate rich 1
mm10_v2_chr7_+_116093336_116093372	0.235785	Hoxa2	ENSMUST00000106608.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene 	ENSMUST00000106607.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr2_-_165388245_165388315	0.234379	Hoxa2	ENSMUST00000103084.3|Zfp334|ENSMUSG00000017667.9|zinc finger protein 334
mm10_v2_chr8_-_83332416_83332494	0.233431	Hoxa2	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr18_-_10610048_10610116	0.233415	Hoxa2	ENSMUST00000115864.1|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr4_-_49597860_49597892	0.232555	Hoxa2	ENSMUST00000042750.2|Tmem246|ENSMUSG00000039611.2|transmembrane protein 246
mm10_v2_chr11_+_29692937_29692997	0.232467	Hoxa2	ENSMUST00000102843.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000102842.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000078830.4|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000170731.1|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr8_-_84840627_84840681	0.230378	Hoxa2	ENSMUST00000003911.6|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae) 	ENSMUST00000109761.2|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae) 	ENSMUST00000128035.1|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae)
mm10_v2_chr6_-_99044414_99044459	0.230089	Hoxa2	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr17_+_37193889_37193897	0.228532	Hoxa2	ENSMUST00000038844.6|Ubd|ENSMUSG00000035186.6|ubiquitin D
mm10_v2_chr5_+_31613939_31613944	0.226713	Hoxa2	ENSMUST00000031024.7|Mrpl33|ENSMUSG00000029142.8|mitochondrial ribosomal protein L33
mm10_v2_chr18_+_56562443_56562593	0.220045	Hoxa2	ENSMUST00000130163.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export 	ENSMUST00000132628.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr17_+_6430112_6430204	0.218957	Hoxa2	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr8_-_123515455_123515498	0.218604	Hoxa2	ENSMUST00000176286.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000169210.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000074879.5|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000066198.7|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000176155.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr2_-_84775388_84775411	0.216536	Hoxa2	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr12_-_87444017_87444017	0.216368	Hoxa2	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr17_+_24470393_24470481	0.214101	Hoxa2	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr11_-_54956047_54956122	0.209865	Hoxa2	ENSMUST00000155316.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000108889.3|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000126703.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1
mm10_v2_chr7_+_104218787_104218826	0.209531	Hoxa2	ENSMUST00000098180.3|Trim6|ENSMUSG00000072244.3|tripartite motif-containing 6
mm10_v2_chr3_-_130060850_130060907	0.209418	Hoxa2	ENSMUST00000001079.8|Sec24b|ENSMUSG00000001052.9|Sec24 related gene family, member B (S. cerevisiae)
mm10_v2_chr7_-_13038201_13038307	0.209271	Hoxa2	ENSMUST00000005714.7|Ube2m|ENSMUSG00000005575.9|ubiquitin-conjugating enzyme E2M 	ENSMUST00000156389.1|Ube2m|ENSMUSG00000005575.9|ubiquitin-conjugating enzyme E2M 	ENSMUST00000165394.2|Ube2m|ENSMUSG00000005575.9|ubiquitin-conjugating enzyme E2M
mm10_v2_chr18_-_24020307_24020370	0.203645	Hoxa2	ENSMUST00000153337.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191 	ENSMUST00000148525.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr10_-_81025406_81025411	0.203416	Hoxa2	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr9_+_58129062_58129088	0.201238	Hoxa2	ENSMUST00000085677.2|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr2_+_31572775_31572841	0.199561	Hoxa2	ENSMUST00000137889.1|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr14_+_103650208_103650243	0.198867	Hoxa2	ENSMUST00000069443.7|Slain1|ENSMUSG00000055717.7|SLAIN motif family, member 1
mm10_v2_chr9_-_85327110_85327128	0.198531	Hoxa2	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr1_+_85650008_85650020	0.195936	Hoxa2	ENSMUST00000054279.8|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000147552.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000153574.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000150967.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100
mm10_v2_chr11_-_101417615_101417615	0.19476	Hoxa2	ENSMUST00000070395.8|Aarsd1|ENSMUSG00000075528.7|alanyl-tRNA synthetase domain containing 1
mm10_v2_chr7_+_119690026_119690026	0.192079	Hoxa2	ENSMUST00000047045.8|Acsm4|ENSMUSG00000047026.8|acyl-CoA synthetase medium-chain family member 4
mm10_v2_chr18_-_61911783_61911854	0.189935	Hoxa2	ENSMUST00000049378.8|Ablim3|ENSMUSG00000032735.8|actin binding LIM protein family, member 3 	ENSMUST00000166783.1|Ablim3|ENSMUSG00000032735.8|actin binding LIM protein family, member 3
mm10_v2_chr4_-_3973581_3973607	0.189151	Hoxa2	ENSMUST00000089430.4|Gm11808|ENSMUSG00000068240.4|predicted gene 11808
mm10_v2_chr10_-_13868932_13869004	0.186924	Hoxa2	ENSMUST00000019942.5|Aig1|ENSMUSG00000019806.7|androgen-induced 1 	ENSMUST00000162610.1|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr9_+_58129321_58129349	0.186798	Hoxa2	ENSMUST00000034880.3|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr1_+_143739551_143739566	0.186472	Hoxa2	ENSMUST00000050491.9|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr3_-_89245159_89245199	0.185438	Hoxa2	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chrX_+_99003224_99003288	0.184156	Hoxa2	ENSMUST00000149999.1|Stard8|ENSMUSG00000031216.7|START domain containing 8
mm10_v2_chr17_-_71002488_71002592	0.184113	Hoxa2	ENSMUST00000148960.1|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chrY_-_6237995_6237995	0.176093	Hoxa2	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr8_-_123515333_123515437	0.176016	Hoxa2	ENSMUST00000177240.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr6_-_21851914_21852183	0.17466	Hoxa2	ENSMUST00000134635.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000123116.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000120965.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12
mm10_v2_chrX_-_143933204_143933311	0.168443	Hoxa2	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr14_-_30923547_30923565	0.162774	Hoxa2	ENSMUST00000170415.1|Itih3|ENSMUSG00000006522.9|inter-alpha trypsin inhibitor, heavy chain 3
mm10_v2_chr2_+_11172080_11172140	0.158991	Hoxa2	ENSMUST00000114853.1|Prkcq|ENSMUSG00000026778.7|protein kinase C, theta
mm10_v2_chr7_+_116093296_116093329	0.158652	Hoxa2	ENSMUST00000032899.5|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr18_-_61259987_61259987	0.158082	Hoxa2	ENSMUST00000170335.2|Rps2-ps10|ENSMUSG00000091957.2|ribosomal protein S2, pseudogene 10
mm10_v2_chr5_+_86804508_86804564	0.158057	Hoxa2	ENSMUST00000038384.7|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr15_-_79834261_79834285	0.157628	Hoxa2	ENSMUST00000148358.1|Cbx6|ENSMUSG00000089715.5|chromobox 6
mm10_v2_chr17_+_6601671_6601671	0.157238	Hoxa2	ENSMUST00000092966.4|Dynlt1c|ENSMUSG00000000579.8|dynein light chain Tctex-type 1C
mm10_v2_chr8_-_94696223_94696287	0.156522	Hoxa2	ENSMUST00000034227.4|Pllp|ENSMUSG00000031775.4|plasma membrane proteolipid
mm10_v2_chr1_-_163403627_163403679	0.15607	Hoxa2	ENSMUST00000045138.4|Gorab|ENSMUSG00000040124.4|golgin, RAB6-interacting
mm10_v2_chr16_+_35983424_35983582	0.15387	Hoxa2	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr15_-_100425050_100425075	0.149673	Hoxa2	ENSMUST00000123461.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr3_+_95622236_95622278	0.148952	Hoxa2	ENSMUST00000074353.4|Rps10-ps1|ENSMUSG00000060438.4|ribosomal protein S10, pseudogene 1
mm10_v2_chr1_-_79671966_79671993	0.147606	Hoxa2	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr14_-_76110760_76110818	0.145908	Hoxa2	ENSMUST00000022585.3|Gpalpp1|ENSMUSG00000022008.3|GPALPP motifs containing 1
mm10_v2_chr9_-_78448786_78448786	0.144875	Hoxa2	ENSMUST00000165499.1|Gm17324|ENSMUSG00000090317.1|predicted gene, 17324
mm10_v2_chr11_-_31671727_31671856	0.144739	Hoxa2	ENSMUST00000109415.1|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr2_+_119675062_119675095	0.144509	Hoxa2	ENSMUST00000028767.8|Rtf1|ENSMUSG00000027304.9|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr15_-_35938009_35938178	0.144088	Hoxa2	ENSMUST00000156915.1|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr3_+_103279293_103279293	0.143245	Hoxa2	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr3_+_152346465_152346531	0.137704	Hoxa2	ENSMUST00000026507.6|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33 	ENSMUST00000117492.2|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33
mm10_v2_chr9_+_110656494_110656544	0.134535	Hoxa2	ENSMUST00000019803.4|Ccdc12|ENSMUSG00000019659.4|coiled-coil domain containing 12
mm10_v2_chr13_+_21787461_21787508	0.134285	Hoxa2	ENSMUST00000110473.2|Hist1h2bp|ENSMUSG00000069308.7|histone cluster 1, H2bp 	ENSMUST00000102982.1|Hist1h2bp|ENSMUSG00000069308.7|histone cluster 1, H2bp
mm10_v2_chr3_+_88716838_88716883	0.132394	Hoxa2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr3_-_150073620_150073620	0.1271	Hoxa2	ENSMUST00000057740.5|Rpsa-ps10|ENSMUSG00000047676.5|ribosomal protein SA, pseudogene 10
mm10_v2_chr8_-_54724474_54724504	0.125611	Hoxa2	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr3_-_158031705_158031774	0.120775	Hoxa2	ENSMUST00000072875.8|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr7_+_140125651_140125727	0.119816	Hoxa2	ENSMUST00000026537.5|Paox|ENSMUSG00000025464.8|polyamine oxidase (exo-N4-amino) 	ENSMUST00000097967.3|Paox|ENSMUSG00000025464.8|polyamine oxidase (exo-N4-amino)
mm10_v2_chr5_+_136953246_136953406	0.119092	Hoxa2	ENSMUST00000111094.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast) 	ENSMUST00000111097.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast)
mm10_v2_chr12_+_17348422_17348526	0.11885	Hoxa2	ENSMUST00000046011.10|Nol10|ENSMUSG00000061458.8|nucleolar protein 10
mm10_v2_chr10_-_81364846_81364859	0.1187	Hoxa2	ENSMUST00000131736.1|4930404N11Rik|ENSMUSG00000020234.4|RIKEN cDNA 4930404N11 gene
mm10_v2_chr15_-_100495239_100495267	0.117743	Hoxa2	ENSMUST00000061457.5|Csrnp2|ENSMUSG00000044636.5|cysteine-serine-rich nuclear protein 2
mm10_v2_chr17_-_24724374_24724478	0.117055	Hoxa2	ENSMUST00000135708.1|Ndufb10|ENSMUSG00000040048.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 	ENSMUST00000045602.8|Ndufb10|ENSMUSG00000040048.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10
mm10_v2_chr1_+_91053422_91053520	0.116886	Hoxa2	ENSMUST00000097650.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000068167.6|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000097649.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1
mm10_v2_chr9_-_75599124_75599141	0.114916	Hoxa2	ENSMUST00000098552.2|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr9_+_15520830_15520846	0.114542	Hoxa2	ENSMUST00000178999.1|Smco4|ENSMUSG00000058173.5|single-pass membrane protein with coiled-coil domains 4
mm10_v2_chr5_+_29735688_29735737	0.111518	Hoxa2	ENSMUST00000008733.8|Dnajb6|ENSMUSG00000029131.8|DnaJ (Hsp40) homolog, subfamily B, member 6
mm10_v2_chr11_+_54438188_54438220	0.108064	Hoxa2	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr9_+_88548013_88548183	0.10723	Hoxa2	ENSMUST00000162827.1|Zfp949|ENSMUSG00000032425.9|zinc finger protein 949 	ENSMUST00000160652.1|Zfp949|ENSMUSG00000032425.9|zinc finger protein 949 	ENSMUST00000162985.1|Zfp949|ENSMUSG00000032425.9|zinc finger protein 949 	ENSMUST00000161232.1|Zfp949|ENSMUSG00000032425.9|zinc finger protein 949 	ENSMUST00000161458.1|Zfp949|ENSMUSG00000032425.9|zinc finger protein 949
mm10_v2_chr7_+_17203469_17203485	0.106201	Hoxa2	ENSMUST00000075934.5|Psg29|ENSMUSG00000023159.7|pregnancy-specific glycoprotein 29
mm10_v2_chr10_-_88605017_88605152	0.105653	Hoxa2	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr7_-_78847206_78847255	0.103726	Hoxa2	ENSMUST00000032839.6|Det1|ENSMUSG00000030610.7|de-etiolated homolog 1 (Arabidopsis)
mm10_v2_chr5_-_48754521_48754570	0.102611	Hoxa2	ENSMUST00000101214.2|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4 	ENSMUST00000176191.1|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr11_-_120991305_120991339	0.101646	Hoxa2	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr8_-_89187560_89187560	0.0999993	Hoxa2	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr8_+_70315759_70315835	0.0973384	Hoxa2	ENSMUST00000165819.2|Gdf1|ENSMUSG00000055694.9|growth differentiation factor 1 	ENSMUST00000140239.1|Cers1|ENSMUSG00000087408.3|ceramide synthase 1
mm10_v2_chr3_+_88716884_88716906	0.097173	Hoxa2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr1_+_83159733_83159781	0.0944671	Hoxa2	ENSMUST00000113436.1|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1 	ENSMUST00000065436.3|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1 	ENSMUST00000065403.6|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1
mm10_v2_chr10_-_29144194_29144194	0.0919919	Hoxa2	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr3_-_153912966_153912990	0.0911596	Hoxa2	ENSMUST00000089950.4|Rabggtb|ENSMUSG00000038975.8|RAB geranylgeranyl transferase, b subunit
mm10_v2_chr1_+_134560190_134560213	0.0908222	Hoxa2	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr7_+_110777653_110777697	0.0907553	Hoxa2	ENSMUST00000148292.1|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr13_+_108670576_108670581	0.0902117	Hoxa2	ENSMUST00000074680.6|Rps3a3|ENSMUSG00000059751.6|ribosomal protein S3A3
mm10_v2_chr16_-_3872378_3872411	0.0876633	Hoxa2	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr11_+_94327984_94328029	0.0859019	Hoxa2	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr7_+_30751471_30751562	0.0850587	Hoxa2	ENSMUST00000182229.1|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000182227.1|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000080518.6|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000182721.1|Sbsn|ENSMUSG00000046056.8|suprabasin
mm10_v2_chr1_+_164048214_164048234	0.0829318	Hoxa2	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr15_+_36179530_36179701	0.0798436	Hoxa2	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr14_-_61037937_61037998	0.0795118	Hoxa2	ENSMUST00000111236.2|Tnfrsf19|ENSMUSG00000060548.6|tumor necrosis factor receptor superfamily, member 19
mm10_v2_chr2_-_155826647_155826766	0.0775284	Hoxa2	ENSMUST00000109638.1|Eif6|ENSMUSG00000027613.9|eukaryotic translation initiation factor 6 	ENSMUST00000134278.1|Eif6|ENSMUSG00000027613.9|eukaryotic translation initiation factor 6
mm10_v2_chr1_+_85650044_85650052	0.0771568	Hoxa2	ENSMUST00000066427.4|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100
mm10_v2_chr13_-_113663670_113663681	0.0752236	Hoxa2	ENSMUST00000054650.4|Hspb3|ENSMUSG00000051456.4|heat shock protein 3
mm10_v2_chr2_+_30845059_30845059	0.0748242	Hoxa2	ENSMUST00000041659.5|Prrx2|ENSMUSG00000039476.7|paired related homeobox 2
mm10_v2_chr1_-_119053619_119053638	0.0717372	Hoxa2	ENSMUST00000062483.8|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr10_+_80264942_80265033	0.0700495	Hoxa2	ENSMUST00000105362.1|Dazap1|ENSMUSG00000069565.6|DAZ associated protein 1 	ENSMUST00000105361.3|Dazap1|ENSMUSG00000069565.6|DAZ associated protein 1
mm10_v2_chr10_+_80172934_80172961	0.0688972	Hoxa2	ENSMUST00000041882.6|1600002K03Rik|ENSMUSG00000035595.6|RIKEN cDNA 1600002K03 gene
mm10_v2_chr6_+_37870786_37870882	0.0683763	Hoxa2	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr16_-_93603803_93603815	0.0679556	Hoxa2	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chr19_+_46328179_46328205	0.0671651	Hoxa2	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr3_+_58526303_58526303	0.0671141	Hoxa2	ENSMUST00000138848.1|Eif2a|ENSMUSG00000027810.8|eukaryotic translation initiation factor 2A
mm10_v2_chr12_-_82496537_82496537	0.0662009	Hoxa2	ENSMUST00000179295.1|Gm5435|ENSMUSG00000094374.1|predicted gene 5435
mm10_v2_chr1_+_143739016_143739050	0.0651667	Hoxa2	ENSMUST00000145969.1|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr9_+_3404058_3404098	0.0647426	Hoxa2	ENSMUST00000027027.5|Cwf19l2|ENSMUSG00000025898.5|CWF19-like 2, cell cycle control (S. pombe)
mm10_v2_chr9_+_108936648_108936715	0.063922	Hoxa2	ENSMUST00000026743.8|Uqcrc1|ENSMUSG00000025651.9|ubiquinol-cytochrome c reductase core protein 1
mm10_v2_chr1_-_120074023_120074074	0.0635847	Hoxa2	ENSMUST00000056089.7|Tmem37|ENSMUSG00000050777.7|transmembrane protein 37
mm10_v2_chr6_+_88084473_88084527	0.0625528	Hoxa2	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chr5_-_3596071_3596118	0.0624646	Hoxa2	ENSMUST00000121877.1|Rbm48|ENSMUSG00000040302.11|RNA binding motif protein 48
mm10_v2_chr9_+_122923050_122923099	0.0592571	Hoxa2	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr1_+_88103229_88103252	0.0587942	Hoxa2	ENSMUST00000113135.3|Ugt1a6a|ENSMUSG00000054545.11|UDP glucuronosyltransferase 1 family, polypeptide A6A 	ENSMUST00000113138.1|Ugt1a6b|ENSMUSG00000090145.1|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm10_v2_chr17_-_24073479_24073490	0.0587558	Hoxa2	ENSMUST00000017090.5|Kctd5|ENSMUSG00000016946.5|potassium channel tetramerisation domain containing 5
mm10_v2_chr3_+_89215170_89215181	0.056643	Hoxa2	ENSMUST00000029682.4|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chrX_-_7898864_7898912	0.0539112	Hoxa2	ENSMUST00000154552.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr6_+_113604749_113604772	0.0498809	Hoxa2	ENSMUST00000035725.5|Brk1|ENSMUSG00000033940.7|BRICK1, SCAR/WAVE actin-nucleating complex subunit
mm10_v2_chr2_+_172440556_172440630	0.04882	Hoxa2	ENSMUST00000029005.3|Rtfdc1|ENSMUSG00000027502.5|replication termination factor 2 domain containing 1
mm10_v2_chrX_+_38600626_38600691	0.0462216	Hoxa2	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr17_+_34205100_34205100	0.0406717	Hoxa2	ENSMUST00000131105.1|Tap2|ENSMUSG00000024339.6|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr2_+_116900152_116900216	0.0385899	Hoxa2	ENSMUST00000126467.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000128305.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene 	ENSMUST00000155323.1|D330050G23Rik|ENSMUSG00000085316.1|RIKEN cDNA D330050G23 gene
mm10_v2_chr15_+_59315030_59315087	0.0374733	Hoxa2	ENSMUST00000022977.7|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr11_-_101119814_101119849	0.0360209	Hoxa2	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
mm10_v2_chr1_-_30949756_30949770	0.0360015	Hoxa2	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr6_+_49367739_49367896	0.0326183	Hoxa2	ENSMUST00000060561.8|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000121903.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000134786.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A
mm10_v2_chr14_+_73142490_73142564	0.0292418	Hoxa2	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr9_+_58134017_58134075	0.0291105	Hoxa2	ENSMUST00000134955.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000147134.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000170397.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr13_-_41847626_41847684	0.0280564	Hoxa2	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr10_-_30600662_30600749	0.0277806	Hoxa2	ENSMUST00000019927.6|Trmt11|ENSMUSG00000019792.7|tRNA methyltransferase 11
mm10_v2_chr15_-_83510793_83510859	0.0266618	Hoxa2	ENSMUST00000154401.1|Ttll1|ENSMUSG00000022442.9|tubulin tyrosine ligase-like 1
mm10_v2_chr1_-_180813591_180813632	0.0254161	Hoxa2	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr8_-_121829480_121829571	0.0247006	Hoxa2	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr7_-_100658364_100658386	0.0241795	Hoxa2	ENSMUST00000107043.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr17_+_87078255_87078267	0.0237114	Hoxa2	ENSMUST00000090731.5|Gm5499|ENSMUSG00000071035.4|predicted pseudogene 5499
mm10_v2_chr14_+_55015454_55015571	0.0229631	Hoxa2	ENSMUST00000022815.8|Ngdn|ENSMUSG00000022204.8|neuroguidin, EIF4E binding protein
mm10_v2_chr4_-_41314877_41314889	0.0207725	Hoxa2	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chrX_-_134161928_134161928	0.020291	Hoxa2	ENSMUST00000033611.4|Xkrx|ENSMUSG00000031258.4|X Kell blood group precursor related X linked
mm10_v2_chr10_-_81025521_81025662	0.0180826	Hoxa2	ENSMUST00000144640.1|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr4_+_43441939_43441939	0.0173406	Hoxa2	ENSMUST00000060864.6|Tesk1|ENSMUSG00000028458.6|testis specific protein kinase 1
mm10_v2_chr11_-_65162904_65162976	0.017071	Hoxa2	ENSMUST00000093002.5|Arhgap44|ENSMUSG00000033389.10|Rho GTPase activating protein 44 	ENSMUST00000047463.8|Arhgap44|ENSMUSG00000033389.10|Rho GTPase activating protein 44
mm10_v2_chr2_-_136891131_136891186	0.0149723	Hoxa2	ENSMUST00000144275.1|Mkks|ENSMUSG00000027274.10|McKusick-Kaufman syndrome
mm10_v2_chr1_+_88134786_88134882	0.0149497	Hoxa2	ENSMUST00000113134.1|Ugt1a6a|ENSMUSG00000054545.11|UDP glucuronosyltransferase 1 family, polypeptide A6A 	ENSMUST00000140092.1|Ugt1a6a|ENSMUSG00000054545.11|UDP glucuronosyltransferase 1 family, polypeptide A6A
mm10_v2_chr11_+_119913423_119913441	0.0135867	Hoxa2	ENSMUST00000132197.1|Chmp6|ENSMUSG00000025371.6|charged multivesicular body protein 6
mm10_v2_chr15_-_53902472_53902530	0.0104653	Hoxa2	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr9_-_44344159_44344228	0.00826602	Hoxa2	ENSMUST00000077353.7|Hmbs|ENSMUSG00000032126.9|hydroxymethylbilane synthase
mm10_v2_chr6_+_34709442_34709497	0.00819912	Hoxa2	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr3_-_107943390_107943421	0.00720488	Hoxa2	ENSMUST00000106681.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr8_-_3946863_3946863	0.00521204	Hoxa2	ENSMUST00000044060.7|Cd209c|ENSMUSG00000040165.7|CD209c antigen
mm10_v2_chr2_+_5951440_5951469	0.00488618	Hoxa2	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr8_+_13435459_13435503	0.0046799	Hoxa2	ENSMUST00000167071.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B 	ENSMUST00000167505.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B
mm10_v2_chr7_-_3720382_3720382	0.0043497	Hoxa2	ENSMUST00000078451.6|Pirb|ENSMUSG00000058818.7|paired Ig-like receptor B
mm10_v2_chr12_-_20900867_20900867	0.000304646	Hoxa2	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
