mm10_v2_chr7_-_45103747_45103822	3.04143	Lhx3	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr7_-_103827922_103828096	2.85822	Lhx3	ENSMUST00000023934.6|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain 	ENSMUST00000153218.1|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain
mm10_v2_chr4_+_136143497_136143497	2.73108	Lhx3	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr13_+_49608030_49608071	2.22955	Lhx3	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr4_+_118961578_118961612	2.17706	Lhx3	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr18_+_57468478_57468541	2.07366	Lhx3	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chr3_+_151437887_151437914	1.99426	Lhx3	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr14_+_80000292_80000309	1.7628	Lhx3	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr11_+_109543694_109543754	1.47227	Lhx3	ENSMUST00000106696.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr8_-_21906412_21906437	1.38051	Lhx3	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr1_+_177444653_177444669	1.25738	Lhx3	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr2_-_160619971_160619971	1.21993	Lhx3	ENSMUST00000109473.1|Gm14221|ENSMUSG00000078956.2|predicted gene 14221
mm10_v2_chrX_+_66653003_66653031	1.17311	Lhx3	ENSMUST00000036043.4|Slitrk2|ENSMUSG00000036790.5|SLIT and NTRK-like family, member 2
mm10_v2_chr5_-_70842617_70842617	0.987979	Lhx3	ENSMUST00000031119.1|Gabrg1|ENSMUSG00000001260.6|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm10_v2_chr2_-_33086366_33086447	0.976039	Lhx3	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr10_-_62507737_62507764	0.951688	Lhx3	ENSMUST00000020271.6|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr4_-_14621805_14621819	0.94415	Lhx3	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr13_-_101692624_101692647	0.939808	Lhx3	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr2_-_33087169_33087253	0.92447	Lhx3	ENSMUST00000102810.3|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr5_-_62766153_62766246	0.894805	Lhx3	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr6_+_34780412_34780467	0.740674	Lhx3	ENSMUST00000115016.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115017.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chrM_-_14060_14074	0.727822	Lhx3	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr17_-_36032682_36032855	0.71286	Lhx3	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr10_+_36506814_36506846	0.686462	Lhx3	ENSMUST00000167191.1|Hs3st5|ENSMUSG00000044499.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 5 	ENSMUST00000058738.4|Hs3st5|ENSMUSG00000044499.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm10_v2_chr3_+_66985680_66985692	0.67518	Lhx3	ENSMUST00000065047.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr10_-_53647080_53647080	0.629989	Lhx3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chrX_+_166344692_166344770	0.5683	Lhx3	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr3_+_84952146_84952186	0.566639	Lhx3	ENSMUST00000029727.7|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr3_-_57294880_57294899	0.565952	Lhx3	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr1_-_158356258_158356313	0.555958	Lhx3	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr2_-_84425258_84425411	0.543508	Lhx3	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chr2_+_36230426_36230491	0.530999	Lhx3	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr18_+_37477768_37477835	0.528536	Lhx3	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr4_+_102589687_102589843	0.516255	Lhx3	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr3_-_116712644_116712655	0.516057	Lhx3	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr3_+_122419772_122419787	0.491098	Lhx3	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr15_+_98571004_98571026	0.417289	Lhx3	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr2_+_125136692_125136769	0.399317	Lhx3	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr3_+_66985647_66985678	0.386775	Lhx3	ENSMUST00000162362.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000065074.7|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr6_+_124304646_124304671	0.382225	Lhx3	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chrM_+_9452_9468	0.377535	Lhx3	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr3_+_95318782_95318793	0.375774	Lhx3	ENSMUST00000139866.1|Cers2|ENSMUSG00000015714.5|ceramide synthase 2
mm10_v2_chrX_-_139871637_139871677	0.371398	Lhx3	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr17_-_67950908_67950983	0.364234	Lhx3	ENSMUST00000164647.1|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr18_+_60774510_60774625	0.318814	Lhx3	ENSMUST00000025511.3|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr18_+_60774675_60774686	0.304304	Lhx3	ENSMUST00000118551.1|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr5_+_66968961_66969132	0.301693	Lhx3	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr10_+_5593718_5593739	0.29761	Lhx3	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr14_-_48665098_48665246	0.289877	Lhx3	ENSMUST00000118578.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr11_-_84069179_84069261	0.257625	Lhx3	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr10_+_75037066_75037100	0.20473	Lhx3	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr3_+_53845086_53845086	0.176199	Lhx3	ENSMUST00000108014.1|Gm10985|ENSMUSG00000078742.1|predicted gene 10985
mm10_v2_chr4_+_134930898_134930997	0.173585	Lhx3	ENSMUST00000030622.2|Syf2|ENSMUSG00000028821.2|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm10_v2_chr11_+_59306920_59306935	0.171655	Lhx3	ENSMUST00000000128.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A 	ENSMUST00000108783.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A
mm10_v2_chr12_-_56536895_56536937	0.160025	Lhx3	ENSMUST00000001536.8|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr2_-_164171113_164171113	0.147337	Lhx3	ENSMUST00000045196.3|Kcns1|ENSMUSG00000040164.3|K+ voltage-gated channel, subfamily S, 1
mm10_v2_chr19_+_46397009_46397033	0.146296	Lhx3	ENSMUST00000118440.1|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila)
mm10_v2_chr10_+_75037291_75037332	0.145639	Lhx3	ENSMUST00000139384.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr3_+_41742615_41742725	0.12463	Lhx3	ENSMUST00000146165.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000119572.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000108065.2|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000120167.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026867.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026868.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed
mm10_v2_chr4_-_147809788_147809840	0.115564	Lhx3	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr4_+_147132038_147132038	0.10664	Lhx3	ENSMUST00000084149.3|Gm13139|ENSMUSG00000067916.3|predicted gene 13139
mm10_v2_chr3_-_41742471_41742548	0.102276	Lhx3	ENSMUST00000026866.8|Sclt1|ENSMUSG00000059834.6|sodium channel and clathrin linker 1
mm10_v2_chr4_-_14621494_14621506	0.0990164	Lhx3	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chrM_+_14138_14154	0.0879801	Lhx3	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr7_-_37772868_37772891	0.0797599	Lhx3	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr9_+_96258697_96258711	0.0781223	Lhx3	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr14_-_108914237_108914257	0.0755832	Lhx3	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr1_-_24612700_24612700	0.070599	Lhx3	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr10_+_23797052_23797200	0.0701753	Lhx3	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chrM_+_9870_9885	0.0696588	Lhx3	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr10_+_102158858_102158889	0.0635145	Lhx3	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr11_-_4095344_4095445	0.0619807	Lhx3	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr3_+_136670076_136670186	0.0568285	Lhx3	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr1_-_36273425_36273443	0.0538553	Lhx3	ENSMUST00000056946.6|Neurl3|ENSMUSG00000047180.6|neuralized homolog 3 homolog (Drosophila)
mm10_v2_chr4_+_147492417_147492417	0.0359461	Lhx3	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr5_+_122422440_122422495	0.0302359	Lhx3	ENSMUST00000031422.3|Anapc7|ENSMUSG00000029466.5|anaphase promoting complex subunit 7 	ENSMUST00000119792.1|Anapc7|ENSMUSG00000029466.5|anaphase promoting complex subunit 7
mm10_v2_chr9_+_120929216_120929251	0.0168005	Lhx3	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr10_+_116143881_116143903	0.010185	Lhx3	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr3_+_142620596_142620627	0.00942924	Lhx3	ENSMUST00000165774.1|Gbp2|ENSMUSG00000028270.6|guanylate binding protein 2
mm10_v2_chrX_-_8252304_8252333	0.00863413	Lhx3	ENSMUST00000115594.1|Ftsj1|ENSMUSG00000031171.5|FtsJ homolog 1 (E. coli)
mm10_v2_chr14_+_69347587_69347587	0.00857624	Lhx3	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr4_+_146610961_146610961	0.00785562	Lhx3	ENSMUST00000130825.1|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr2_+_110597298_110597316	0.00636171	Lhx3	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr17_-_56036546_56036647	0.00445892	Lhx3	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr7_-_45830776_45830944	0.0013075	Lhx3	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
