mm10_v2_chr14_-_19418930_19418930	4.49879	Nkx2-2	ENSMUST00000177817.1|Gm21738|ENSMUSG00000095280.1|predicted gene, 21738
mm10_v2_chr9_+_3018753_3018779	4.31747	Nkx2-2	ENSMUST00000179272.1|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr3_+_5218516_5218544	4.11126	Nkx2-2	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr9_+_3034599_3034599	3.99375	Nkx2-2	ENSMUST00000178641.1|Gm17535|ENSMUSG00000096736.1|predicted gene, 17535
mm10_v2_chr4_+_46039202_46039213	3.92955	Nkx2-2	ENSMUST00000156200.1|Tmod1|ENSMUSG00000028328.7|tropomodulin 1
mm10_v2_chr9_+_3005125_3005159	3.80456	Nkx2-2	ENSMUST00000179881.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr3_-_49757257_49757316	3.80028	Nkx2-2	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr9_+_3015654_3015722	3.79458	Nkx2-2	ENSMUST00000099050.3|Gm10720|ENSMUSG00000074564.3|predicted gene 10720
mm10_v2_chr9_+_3025417_3025490	3.77863	Nkx2-2	ENSMUST00000075573.6|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3017408_3017543	3.76987	Nkx2-2	ENSMUST00000099049.3|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr2_+_62664279_62664300	3.61503	Nkx2-2	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr3_+_118433797_118433966	3.49894	Nkx2-2	ENSMUST00000180593.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181926.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181060.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181310.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr1_-_166002613_166002678	3.16798	Nkx2-2	ENSMUST00000177358.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000160908.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000027850.8|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000160260.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr1_-_135688094_135688149	3.15965	Nkx2-2	ENSMUST00000112103.1|Nav1|ENSMUSG00000090399.1|neuron navigator 1
mm10_v2_chr13_-_41487306_41487346	3.14982	Nkx2-2	ENSMUST00000021794.6|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr10_+_106470281_106470367	3.14417	Nkx2-2	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr2_-_140170528_140170569	3.09049	Nkx2-2	ENSMUST00000046030.7|Esf1|ENSMUSG00000045624.9|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
mm10_v2_chr9_-_96719549_96719565	2.93545	Nkx2-2	ENSMUST00000128269.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr3_-_84304762_84304809	2.8615	Nkx2-2	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr9_-_96719404_96719479	2.75617	Nkx2-2	ENSMUST00000140121.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chrX_+_106027259_106027293	2.66935	Nkx2-2	ENSMUST00000113557.1|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr15_-_8710734_8710764	2.63696	Nkx2-2	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr15_+_83791939_83792153	2.58256	Nkx2-2	ENSMUST00000172115.1|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1 	ENSMUST00000172398.1|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr3_+_62419668_62419668	2.54733	Nkx2-2	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr5_-_69592274_69592308	2.49421	Nkx2-2	ENSMUST00000174233.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000120789.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000166298.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr8_+_69300776_69300776	2.44765	Nkx2-2	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr15_-_10470490_10470527	2.34727	Nkx2-2	ENSMUST00000136591.1|Dnajc21|ENSMUSG00000044224.10|DnaJ (Hsp40) homolog, subfamily C, member 21
mm10_v2_chrX_+_106027300_106027323	2.28486	Nkx2-2	ENSMUST00000055941.6|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr2_+_174076296_174076356	1.96922	Nkx2-2	ENSMUST00000155000.1|Stx16|ENSMUSG00000027522.9|syntaxin 16 	ENSMUST00000134876.1|Stx16|ENSMUSG00000027522.9|syntaxin 16 	ENSMUST00000147038.1|Stx16|ENSMUSG00000027522.9|syntaxin 16
mm10_v2_chr18_+_32163073_32163115	1.95441	Nkx2-2	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr8_+_41239718_41239767	1.92499	Nkx2-2	ENSMUST00000045218.7|Pcm1|ENSMUSG00000031592.9|pericentriolar material 1
mm10_v2_chr12_+_32953874_32953891	1.89467	Nkx2-2	ENSMUST00000076698.5|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr8_+_40354303_40354303	1.83469	Nkx2-2	ENSMUST00000136835.1|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr19_-_5796924_5796964	1.82761	Nkx2-2	ENSMUST00000174808.1|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm10_v2_chr12_-_100899436_100899524	1.74008	Nkx2-2	ENSMUST00000053668.3|Gpr68|ENSMUSG00000047415.5|G protein-coupled receptor 68
mm10_v2_chr1_-_176807124_176807124	1.72032	Nkx2-2	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr10_+_19951055_19951055	1.71647	Nkx2-2	ENSMUST00000152533.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr5_+_66968559_66968577	1.69892	Nkx2-2	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr19_-_40402267_40402267	1.68586	Nkx2-2	ENSMUST00000099467.3|Sorbs1|ENSMUSG00000025006.9|sorbin and SH3 domain containing 1 	ENSMUST00000099466.3|Sorbs1|ENSMUSG00000025006.9|sorbin and SH3 domain containing 1 	ENSMUST00000165212.1|Sorbs1|ENSMUSG00000025006.9|sorbin and SH3 domain containing 1 	ENSMUST00000165469.1|Sorbs1|ENSMUSG00000025006.9|sorbin and SH3 domain containing 1
mm10_v2_chr9_+_72438534_72438578	1.67872	Nkx2-2	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr3_+_52268337_52268388	1.66855	Nkx2-2	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr5_+_3596066_3596256	1.66116	Nkx2-2	ENSMUST00000006061.6|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1 	ENSMUST00000121291.1|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1 	ENSMUST00000142516.1|Pex1|ENSMUSG00000005907.8|peroxisomal biogenesis factor 1
mm10_v2_chrX_+_6415736_6415747	1.65333	Nkx2-2	ENSMUST00000143641.3|Shroom4|ENSMUSG00000068270.9|shroom family member 4
mm10_v2_chr7_+_29768552_29768642	1.58941	Nkx2-2	ENSMUST00000032802.4|Zfp84|ENSMUSG00000046185.10|zinc finger protein 84
mm10_v2_chr7_-_6011010_6011010	1.57497	Nkx2-2	ENSMUST00000086338.1|Vmn1r65|ENSMUSG00000066850.1|vomeronasal 1 receptor 65
mm10_v2_chr3_+_14533817_14533866	1.56837	Nkx2-2	ENSMUST00000169079.1|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1 	ENSMUST00000091325.3|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr1_-_152386589_152386610	1.54038	Nkx2-2	ENSMUST00000162371.1|Tsen15|ENSMUSG00000014980.8|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm10_v2_chr2_+_102706356_102706438	1.53747	Nkx2-2	ENSMUST00000123759.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000111212.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000005220.4|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr5_+_66968961_66969132	1.53501	Nkx2-2	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr3_+_5218546_5218561	1.53493	Nkx2-2	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr17_+_43568641_43568676	1.52317	Nkx2-2	ENSMUST00000169694.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr5_-_123141067_123141094	1.52317	Nkx2-2	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr2_+_52072823_52072854	1.50314	Nkx2-2	ENSMUST00000112693.2|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast) 	ENSMUST00000069794.5|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast)
mm10_v2_chr14_+_76476913_76476930	1.49012	Nkx2-2	ENSMUST00000140251.2|Tsc22d1|ENSMUSG00000022010.13|TSC22 domain family, member 1
mm10_v2_chr19_-_29753600_29753600	1.4874	Nkx2-2	ENSMUST00000175764.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr14_+_47663756_47663756	1.48346	Nkx2-2	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr6_+_8520008_8520058	1.44366	Nkx2-2	ENSMUST00000162567.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1 	ENSMUST00000161217.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1
mm10_v2_chr5_+_66968416_66968447	1.40929	Nkx2-2	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr2_+_23069210_23069327	1.38893	Nkx2-2	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chrX_+_68821093_68821093	1.34131	Nkx2-2	ENSMUST00000096420.2|Gm14698|ENSMUSG00000071748.2|predicted gene 14698
mm10_v2_chr13_-_85127514_85127514	1.3037	Nkx2-2	ENSMUST00000179230.1|Gm4076|ENSMUSG00000096449.1|predicted gene 4076
mm10_v2_chr2_+_3704787_3704807	1.29687	Nkx2-2	ENSMUST00000115054.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr7_+_112374839_112374868	1.26612	Nkx2-2	ENSMUST00000106645.1|Micalcl|ENSMUSG00000030771.9|MICAL C-terminal like
mm10_v2_chr16_-_16527364_16527419	1.26137	Nkx2-2	ENSMUST00000069284.7|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr5_-_123140135_123140289	1.25724	Nkx2-2	ENSMUST00000160099.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr1_-_88008520_88008556	1.22036	Nkx2-2	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chr5_-_3596071_3596118	1.20839	Nkx2-2	ENSMUST00000121877.1|Rbm48|ENSMUSG00000040302.11|RNA binding motif protein 48
mm10_v2_chr6_-_108185552_108185587	1.20373	Nkx2-2	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr17_+_43568475_43568493	1.20227	Nkx2-2	ENSMUST00000167418.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr9_+_72438519_72438533	1.19869	Nkx2-2	ENSMUST00000184604.1|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr4_-_15149755_15149794	1.18124	Nkx2-2	ENSMUST00000108273.1|Necab1|ENSMUSG00000040536.9|N-terminal EF-hand calcium binding protein 1
mm10_v2_chr7_-_80403315_80403339	1.12532	Nkx2-2	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr17_-_32822200_32822200	1.11977	Nkx2-2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr10_-_54075730_54075796	1.09348	Nkx2-2	ENSMUST00000105469.1|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha 	ENSMUST00000003843.8|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha
mm10_v2_chrM_+_11734_11757	1.06289	Nkx2-2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr4_+_115563649_115563699	1.04565	Nkx2-2	ENSMUST00000141033.1|Cyp4a31|ENSMUSG00000028712.6|cytochrome P450, family 4, subfamily a, polypeptide 31 	ENSMUST00000030486.8|Cyp4a31|ENSMUSG00000028712.6|cytochrome P450, family 4, subfamily a, polypeptide 31 	ENSMUST00000126645.1|Cyp4a31|ENSMUSG00000028712.6|cytochrome P450, family 4, subfamily a, polypeptide 31 	ENSMUST00000030480.3|Cyp4a31|ENSMUSG00000028712.6|cytochrome P450, family 4, subfamily a, polypeptide 31
mm10_v2_chr3_+_81932601_81932634	0.967102	Nkx2-2	ENSMUST00000029649.2|Ctso|ENSMUSG00000028015.2|cathepsin O
mm10_v2_chr9_+_35559460_35559493	0.936637	Nkx2-2	ENSMUST00000034615.3|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3 	ENSMUST00000121246.1|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3
mm10_v2_chr2_+_83644435_83644490	0.933635	Nkx2-2	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr13_+_104178797_104178872	0.914938	Nkx2-2	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr18_-_6241470_6241482	0.913601	Nkx2-2	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr18_+_37513652_37513652	0.908771	Nkx2-2	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr9_+_74976096_74976177	0.890215	Nkx2-2	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr9_-_119322421_119322449	0.888659	Nkx2-2	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr13_-_103764502_103764505	0.887481	Nkx2-2	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chr12_-_83487708_83487729	0.88632	Nkx2-2	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr1_-_152386675_152386684	0.867909	Nkx2-2	ENSMUST00000015124.8|Tsen15|ENSMUSG00000014980.8|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm10_v2_chr7_-_123369870_123369920	0.863778	Nkx2-2	ENSMUST00000106442.2|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000098060.3|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000167309.1|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17
mm10_v2_chr3_+_30792876_30792876	0.856431	Nkx2-2	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr10_-_54075702_54075718	0.841178	Nkx2-2	ENSMUST00000105470.1|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha
mm10_v2_chr1_+_179961110_179961110	0.833353	Nkx2-2	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr2_+_69897255_69897303	0.812395	Nkx2-2	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr3_+_138143846_138143886	0.810025	Nkx2-2	ENSMUST00000159481.1|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr6_+_143285988_143286050	0.801142	Nkx2-2	ENSMUST00000160951.1|D6Ertd474e|ENSMUSG00000072679.4|DNA segment, Chr 6, ERATO Doi 474, expressed
mm10_v2_chr12_+_111039334_111039400	0.801017	Nkx2-2	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr13_+_38036989_38036989	0.79544	Nkx2-2	ENSMUST00000021866.8|Riok1|ENSMUSG00000021428.8|RIO kinase 1 (yeast)
mm10_v2_chr3_+_65528457_65528471	0.795309	Nkx2-2	ENSMUST00000130705.1|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr4_+_116558056_116558090	0.771294	Nkx2-2	ENSMUST00000106475.1|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr3_-_146770603_146770781	0.765622	Nkx2-2	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr1_+_82339049_82339086	0.762693	Nkx2-2	ENSMUST00000140020.1|Rhbdd1|ENSMUSG00000026142.9|rhomboid domain containing 1
mm10_v2_chr2_-_114013619_114013638	0.757795	Nkx2-2	ENSMUST00000090275.4|Gjd2|ENSMUSG00000068615.4|gap junction protein, delta 2
mm10_v2_chr13_+_33964659_33964704	0.730961	Nkx2-2	ENSMUST00000021843.5|Nqo2|ENSMUSG00000046949.9|NAD(P)H dehydrogenase, quinone 2 	ENSMUST00000058978.7|Nqo2|ENSMUSG00000046949.9|NAD(P)H dehydrogenase, quinone 2
mm10_v2_chr13_-_38037069_38037158	0.72218	Nkx2-2	ENSMUST00000089840.4|Cage1|ENSMUSG00000044566.9|cancer antigen 1
mm10_v2_chr5_+_105876532_105876585	0.71585	Nkx2-2	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr13_+_21478907_21478907	0.710984	Nkx2-2	ENSMUST00000062609.5|Zkscan4|ENSMUSG00000054931.6|zinc finger with KRAB and SCAN domains 4
mm10_v2_chr2_-_77946331_77946373	0.709674	Nkx2-2	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr14_-_104522615_104522707	0.688236	Nkx2-2	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr18_+_37504264_37504296	0.685572	Nkx2-2	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chr18_-_61786636_61786702	0.673673	Nkx2-2	ENSMUST00000120472.1|Afap1l1|ENSMUSG00000033032.9|actin filament associated protein 1-like 1
mm10_v2_chr11_+_57518657_57518722	0.668661	Nkx2-2	ENSMUST00000108849.1|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3 	ENSMUST00000020830.7|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3
mm10_v2_chr2_-_77946375_77946392	0.667529	Nkx2-2	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr11_-_69900930_69900941	0.664561	Nkx2-2	ENSMUST00000018714.6|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000128046.1|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr12_+_59129720_59129755	0.656728	Nkx2-2	ENSMUST00000175912.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176892.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr1_+_179960472_179960585	0.654345	Nkx2-2	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr12_-_91849081_91849157	0.645672	Nkx2-2	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr17_-_15564322_15564359	0.643548	Nkx2-2	ENSMUST00000147532.1|Prdm9|ENSMUSG00000051977.8|PR domain containing 9
mm10_v2_chr18_-_6241486_6241550	0.643244	Nkx2-2	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr18_-_73754457_73754503	0.642419	Nkx2-2	ENSMUST00000041138.2|Elac1|ENSMUSG00000036941.2|elaC homolog 1 (E. coli)
mm10_v2_chr1_-_9748376_9748451	0.63855	Nkx2-2	ENSMUST00000057438.6|Vcpip1|ENSMUSG00000045210.8|valosin containing protein (p97)/p47 complex interacting protein 1
mm10_v2_chr14_+_51884982_51885141	0.629593	Nkx2-2	ENSMUST00000167984.1|Mettl17|ENSMUSG00000004561.8|methyltransferase like 17
mm10_v2_chr17_+_70561739_70561787	0.618488	Nkx2-2	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr2_-_127444524_127444572	0.614691	Nkx2-2	ENSMUST00000028848.3|Fahd2a|ENSMUSG00000027371.4|fumarylacetoacetate hydrolase domain containing 2A
mm10_v2_chr11_-_57518596_57518655	0.608668	Nkx2-2	ENSMUST00000108850.1|Fam114a2|ENSMUSG00000020523.8|family with sequence similarity 114, member A2 	ENSMUST00000020831.6|Fam114a2|ENSMUSG00000020523.8|family with sequence similarity 114, member A2
mm10_v2_chr17_-_65884902_65884937	0.591064	Nkx2-2	ENSMUST00000024905.9|Ralbp1|ENSMUSG00000024096.10|ralA binding protein 1
mm10_v2_chr3_+_65528404_65528431	0.589268	Nkx2-2	ENSMUST00000047906.3|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr5_+_110839973_110840022	0.58733	Nkx2-2	ENSMUST00000066160.1|Chek2|ENSMUSG00000029521.3|checkpoint kinase 2
mm10_v2_chr15_+_75704280_75704394	0.584619	Nkx2-2	ENSMUST00000121137.1|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1 	ENSMUST00000023244.5|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1
mm10_v2_chr6_-_70792155_70792232	0.583427	Nkx2-2	ENSMUST00000066134.5|Rpia|ENSMUSG00000053604.5|ribose 5-phosphate isomerase A
mm10_v2_chr18_+_12972225_12972314	0.572755	Nkx2-2	ENSMUST00000025290.5|Impact|ENSMUSG00000024423.5|imprinted and ancient
mm10_v2_chrX_+_75382384_75382399	0.568717	Nkx2-2	ENSMUST00000033541.4|Fundc2|ENSMUSG00000031198.4|FUN14 domain containing 2
mm10_v2_chr2_+_140152043_140152043	0.556842	Nkx2-2	ENSMUST00000104994.2|Gm17374|ENSMUSG00000078197.2|predicted gene, 17374
mm10_v2_chr11_-_69900886_69900929	0.555216	Nkx2-2	ENSMUST00000108621.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000100969.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr16_+_14705832_14705858	0.549054	Nkx2-2	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr4_+_126024506_126024550	0.54239	Nkx2-2	ENSMUST00000106162.1|Csf3r|ENSMUSG00000028859.8|colony stimulating factor 3 receptor (granulocyte)
mm10_v2_chr18_-_84951477_84951536	0.531111	Nkx2-2	ENSMUST00000025547.2|Timm21|ENSMUSG00000024645.4|tranlocase of inner mitochondrial membrane 21
mm10_v2_chr6_-_38046994_38046998	0.529266	Nkx2-2	ENSMUST00000096040.4|Svopl|ENSMUSG00000029830.9|SV2 related protein homolog (rat)-like
mm10_v2_chr11_-_71004387_71004501	0.497326	Nkx2-2	ENSMUST00000124464.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33 	ENSMUST00000108527.1|Dhx33|ENSMUSG00000040620.9|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm10_v2_chr3_+_138143429_138143477	0.495603	Nkx2-2	ENSMUST00000040321.6|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr3_+_138143888_138143919	0.492745	Nkx2-2	ENSMUST00000161141.1|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr13_-_29855630_29855676	0.491592	Nkx2-2	ENSMUST00000091674.5|Cdkal1|ENSMUSG00000006191.11|CDK5 regulatory subunit associated protein 1-like 1 	ENSMUST00000006353.7|Cdkal1|ENSMUSG00000006191.11|CDK5 regulatory subunit associated protein 1-like 1
mm10_v2_chr2_-_26380600_26380654	0.491332	Nkx2-2	ENSMUST00000114115.2|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4 	ENSMUST00000035427.4|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4
mm10_v2_chr15_-_58034289_58034298	0.485185	Nkx2-2	ENSMUST00000100655.3|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene
mm10_v2_chr19_+_8819401_8819401	0.465506	Nkx2-2	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr7_+_44836286_44836294	0.46083	Nkx2-2	ENSMUST00000033015.7|Il4i1|ENSMUSG00000074141.6|interleukin 4 induced 1
mm10_v2_chrX_+_73673150_73673242	0.460065	Nkx2-2	ENSMUST00000033752.7|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8 	ENSMUST00000114467.2|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm10_v2_chr3_-_146770218_146770261	0.454428	Nkx2-2	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr6_-_59426279_59426345	0.451167	Nkx2-2	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr10_-_33995054_33995054	0.450251	Nkx2-2	ENSMUST00000164429.1|Gm17567|ENSMUSG00000090666.1|predicted gene, 17567
mm10_v2_chr9_-_4796218_4796267	0.422151	Nkx2-2	ENSMUST00000027020.6|Gria4|ENSMUSG00000025892.9|glutamate receptor, ionotropic, AMPA4 (alpha 4) 	ENSMUST00000063508.7|Gria4|ENSMUSG00000025892.9|glutamate receptor, ionotropic, AMPA4 (alpha 4) 	ENSMUST00000163309.1|Gria4|ENSMUSG00000025892.9|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm10_v2_chr3_+_76593550_76593550	0.421772	Nkx2-2	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr3_+_138143483_138143517	0.413008	Nkx2-2	ENSMUST00000162864.1|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr12_+_105784694_105784872	0.4077	Nkx2-2	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr11_-_69900949_69901001	0.40665	Nkx2-2	ENSMUST00000102580.3|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr13_-_18382041_18382041	0.401956	Nkx2-2	ENSMUST00000139064.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2 	ENSMUST00000175703.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2
mm10_v2_chr19_-_28911879_28911879	0.373945	Nkx2-2	ENSMUST00000179171.1|AC163993.1|ENSMUSG00000095556.1|AC163993.1
mm10_v2_chr14_-_59395381_59395381	0.357731	Nkx2-2	ENSMUST00000166912.2|Phf11c|ENSMUSG00000091144.2|PHD finger protein 11C
mm10_v2_chr5_+_149439706_149439721	0.350816	Nkx2-2	ENSMUST00000031667.4|Tex26|ENSMUSG00000029660.7|testis expressed 26
mm10_v2_chr2_-_84775388_84775411	0.34632	Nkx2-2	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr14_-_54686060_54686167	0.343241	Nkx2-2	ENSMUST00000125265.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1
mm10_v2_chr2_-_84775420_84775444	0.338272	Nkx2-2	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr14_-_72602945_72603003	0.337684	Nkx2-2	ENSMUST00000162825.1|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chrX_+_140367494_140367494	0.334753	Nkx2-2	ENSMUST00000141660.1|Frmpd3|ENSMUSG00000042425.11|FERM and PDZ domain containing 3
mm10_v2_chr4_+_125029992_125030070	0.326562	Nkx2-2	ENSMUST00000030684.7|Gnl2|ENSMUSG00000028869.7|guanine nucleotide binding protein-like 2 (nucleolar)
mm10_v2_chr3_+_138143799_138143843	0.324715	Nkx2-2	ENSMUST00000159622.1|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr12_+_74297474_74297474	0.306306	Nkx2-2	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chr17_+_71616215_71616259	0.303456	Nkx2-2	ENSMUST00000047086.9|Wdr43|ENSMUSG00000041057.9|WD repeat domain 43
mm10_v2_chr13_-_64274962_64275004	0.300494	Nkx2-2	ENSMUST00000039318.8|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr6_+_3993776_3993797	0.289653	Nkx2-2	ENSMUST00000031673.5|Gngt1|ENSMUSG00000029663.5|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm10_v2_chrX_-_101420206_101420225	0.289202	Nkx2-2	ENSMUST00000118092.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3
mm10_v2_chr3_+_76075583_76075583	0.285495	Nkx2-2	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr2_-_26237368_26237525	0.283297	Nkx2-2	ENSMUST00000036187.8|Qsox2|ENSMUSG00000036327.12|quiescin Q6 sulfhydryl oxidase 2
mm10_v2_chr7_-_83550258_83550258	0.279283	Nkx2-2	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr6_+_145953429_145953584	0.254591	Nkx2-2	ENSMUST00000111701.1|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr19_+_6241668_6241694	0.243076	Nkx2-2	ENSMUST00000045351.6|Atg2a|ENSMUSG00000024773.8|autophagy related 2A
mm10_v2_chrX_+_101274023_101274034	0.224031	Nkx2-2	ENSMUST00000117706.1|Med12|ENSMUSG00000079487.5|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)
mm10_v2_chr7_+_19345135_19345149	0.221927	Nkx2-2	ENSMUST00000160369.1|Ercc1|ENSMUSG00000003549.3|excision repair cross-complementing rodent repair deficiency, complementation group 1
mm10_v2_chr7_-_43533171_43533209	0.216701	Nkx2-2	ENSMUST00000004728.5|Cd33|ENSMUSG00000004609.5|CD33 antigen 	ENSMUST00000039861.5|Cd33|ENSMUSG00000004609.5|CD33 antigen
mm10_v2_chr11_-_110251736_110251776	0.20984	Nkx2-2	ENSMUST00000044003.7|Abca6|ENSMUSG00000044749.7|ATP-binding cassette, sub-family A (ABC1), member 6
mm10_v2_chr10_+_126978690_126978749	0.20954	Nkx2-2	ENSMUST00000105256.2|Ctdsp2|ENSMUSG00000078429.2|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm10_v2_chr3_-_57294880_57294899	0.196825	Nkx2-2	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr1_-_16093286_16093341	0.143395	Nkx2-2	ENSMUST00000145070.1|4930444P10Rik|ENSMUSG00000067795.7|RIKEN cDNA 4930444P10 gene 	ENSMUST00000151004.1|4930444P10Rik|ENSMUSG00000067795.7|RIKEN cDNA 4930444P10 gene
mm10_v2_chr16_+_14580221_14580221	0.135819	Nkx2-2	ENSMUST00000147024.1|A630010A05Rik|ENSMUSG00000075395.4|RIKEN cDNA A630010A05 gene
mm10_v2_chr11_+_97685903_97685966	0.131496	Nkx2-2	ENSMUST00000107583.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr6_+_94500313_94500353	0.130834	Nkx2-2	ENSMUST00000061118.8|Slc25a26|ENSMUSG00000045100.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm10_v2_chr4_+_59626189_59626253	0.123277	Nkx2-2	ENSMUST00000070150.4|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene 	ENSMUST00000052420.6|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene
mm10_v2_chr5_-_30073554_30073617	0.119263	Nkx2-2	ENSMUST00000026846.6|Tyms|ENSMUSG00000025747.6|thymidylate synthase
mm10_v2_chr10_-_93891141_93891202	0.116327	Nkx2-2	ENSMUST00000180840.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr17_+_74489492_74489575	0.114183	Nkx2-2	ENSMUST00000024873.6|Yipf4|ENSMUSG00000024072.8|Yip1 domain family, member 4
mm10_v2_chr6_-_120357440_120357489	0.104361	Nkx2-2	ENSMUST00000112703.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chrX_-_101419788_101419914	0.100766	Nkx2-2	ENSMUST00000117901.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000120201.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000117637.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000134005.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000121520.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3
mm10_v2_chr7_+_29783958_29784084	0.0996245	Nkx2-2	ENSMUST00000032803.5|Zfp30|ENSMUSG00000047473.8|zinc finger protein 30 	ENSMUST00000122387.1|Zfp30|ENSMUSG00000047473.8|zinc finger protein 30
mm10_v2_chr5_-_110839575_110839734	0.0785443	Nkx2-2	ENSMUST00000145318.1|Hscb|ENSMUSG00000043510.6|HscB iron-sulfur cluster co-chaperone homolog (E. coli)
mm10_v2_chr10_+_93897156_93897161	0.0455372	Nkx2-2	ENSMUST00000180815.1|4930471D02Rik|ENSMUSG00000097689.1|RIKEN cDNA 4930471D02 gene
mm10_v2_chr2_+_32535724_32535739	0.0365037	Nkx2-2	ENSMUST00000133366.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr6_-_120357342_120357400	0.0341044	Nkx2-2	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr11_+_3649759_3649759	0.0317001	Nkx2-2	ENSMUST00000140242.1|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chrX_+_9885622_9885622	0.0182181	Nkx2-2	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chrX_+_56609751_56609797	0.0025397	Nkx2-2	ENSMUST00000144068.1|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
